RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMPR2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067336

Ensembl transcript IDs: ENSMUST00000087435.7

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGTTCTGAGCACTGGGGGCTCTTCCACAGGACCCAGGTTCTATaGCCAGCACCCATTTGGGAACTGTCTCTAACTCCAGTTCCAGAG +
Preference number: 1 (lower is better)
Translates to: SSSEHWGLFHRTQVL*PAPIWELSLTPVPE
Trigger: CTCTGGAACTGGAGTTAGAGACAGTTCCCAAATGGGTGCTGGGCATAGAACCTGGGTCCTGTGGAAGAGCCCCCAGTGCTCAGAACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 90 bp TGGGGGCTCTTCCACAGGACCCAGGTTCTATGCCCAGCACCCATTTaGGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTA +
Preference number: 1 (lower is better)
Translates to: WGLFHRTQVLCPAPI*ELSLTPVPEDLTPL
Trigger: TAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCCCAAATGGGTGCTGGGCATAGAACCTGGGTCCTGTGGAAGAGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 90 bp ATGCATGTCACTGGATCCTATGGAAGTTGTGAGCTGCCATGTAGCTaGTGGGAACTGAACTTGGGTTCTCGTGAGGACAGGAAGCACTGT +
Preference number: 1 (lower is better)
Translates to: MHVTGSYGSCELPCS*WELNLGSREDRKHC
Trigger: ACAGTGCTTCCTGTCCTCACGAGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTCACAACTTCCATAGGATCCAGTGACATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 90 bp CATGTCACTGGATCCTATGGAAGTTGTGAGCTGCCATGTAGCTGCTaGGAACTGAACTTGGGTTCTCGTGAGGACAGGAAGCACTGTTAT +
Preference number: 1 (lower is better)
Translates to: HVTGSYGSCELPCSC*ELNLGSREDRKHCY
Trigger: ATAACAGTGCTTCCTGTCCTCACGAGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTCACAACTTCCATAGGATCCAGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 90 bp TCAAGGTACAGCAGCACCAGAAGCTACGTGACAGCAACGTCACGGTaGATCATCACCAGAAGTATGCTCTACTACAACACACACAGTGAA +
Preference number: 1 (lower is better)
Translates to: SRYSSTRSYVTATSR*IITRSMLYYNTHSE
Trigger: TTCACTGTGTGTGTTGTAGTAGAGCATACTTCTGGTGATGATGCACCGTGACGTTGCTGTCACGTAGCTTCTGGTGCTGCTGTACCTTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 90 bp ATAAACTTAGGAAAGACAGAGGGTCAATCCTGGTCTGCGCACTGGTaGCAAGTTTGCAGCAAGCCTTTATTCCACAGGAATCGGCATGCT +
Preference number: 1 (lower is better)
Translates to: INLGKTEGQSWSAHW*QVCSKPLFHRNRHA
Trigger: AGCATGCCGATTCCTGTGGAATAAAGGCTTGCTGCAAACTTGCCACCAGTGCGCAGACCAGGATTGACCCTCTGTCTTTCCTAAGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 90 bp ACGGTGCATCATCACCAGAAGTATGCTCTACTACAACACACACAGTaGATGCTGCTCGCAGTCAAAGAACACATGAAACTGGCAGAAGGG +
Preference number: 1 (lower is better)
Translates to: TVHHHQKYALLQHTQ*MLLAVKEHMKLAEG
Trigger: CCCTTCTGCCAGTTTCATGTGTTCTTTGACTGCGAGCAGCATTCACTGTGTGTGTTGTAGTAGAGCATACTTCTGGTGATGATGCACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 90 bp GAAATAAACTTAGGAAAGACAGAGGGTCAATCCTGGTCTGCGCACTaGTGGCAAGTTTGCAGCAAGCCTTTATTCCACAGGAATCGGCAT +
Preference number: 1 (lower is better)
Translates to: EINLGKTEGQSWSAH*WQVCSKPLFHRNRH
Trigger: ATGCCGATTCCTGTGGAATAAAGGCTTGCTGCAAACTTGCCACCAGTGCGCAGACCAGGATTGACCCTCTGTCTTTCCTAAGTTTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 90 bp AGGATTAGTGAAGAAATAAACTTAGGAAAGACAGAGGGTCAATCCTaGTCTGCGCACTGGTGGCAAGTTTGCAGCAAGCCTTTATTCCAC +
Preference number: 1 (lower is better)
Translates to: RISEEINLGKTEGQS*SAHWWQVCSKPLFH
Trigger: GTGGAATAAAGGCTTGCTGCAAACTTGCCACCAGTGCGCAGACCAGGATTGACCCTCTGTCTTTCCTAAGTTTATTTCTTCACTAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 90 bp ACCAACAAAAGATACCCGTTAACAAGACAGAGGGTTCTGAGGAAGTaGCAGCCTTTCTTTCCCTACAAAGCACCCTCAGAAATGAATACT +
Preference number: 1 (lower is better)
Translates to: TNKRYPLTRQRVLRK*QPFFPYKAPSEMNT
Trigger: AGTATTCATTTCTGAGGGTGCTTTGTAGGGAAAGAAAGGCTGGCACTTCCTCAGAACCCTCTGTCTTGTTAACGGGTATCTTTTGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 90 bp CAGTACACTGCACATCAGTTCATAAAGAAAGTGGACCGTGTGTTGTaGATAAAAGACATTTGGAGATACAGACCTAGAGTGAACTCCCAG +
Preference number: 1 (lower is better)
Translates to: QYTAHQFIKKVDRVL*IKDIWRYRPRVNSQ
Trigger: CTGGGAGTTCACTCTAGGTCTGTATCTCCAAATGTCTTTTATGCACAACACACGGTCCACTTTCTTTATGAACTGATGTGCAGTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 90 bp AAGAGAGACAGAATAGGCATGGAGAAAACTTTCCTGGCATATGACTaGAGGCCAGATAGTAAAGGGACAGGCTCTATAAACCATGAGAAA +
Preference number: 1 (lower is better)
Translates to: KRDRIGMEKTFLAYD*RPDSKGTGSINHEK
Trigger: TTTCTCATGGTTTATAGAGCCTGTCCCTTTACTATCTGGCCTGCAGTCATATGCCAGGAAAGTTTTCTCCATGCCTATTCTGTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 90 bp ATGTCAGCGTTCATAGTGGCATCCATAGATAATACAAAAGGAAAGTaGTCTGCTTTATTTCATACTCACACTGCTCCGTCACACAACTTA +
Preference number: 1 (lower is better)
Translates to: MSAFIVASIDNTKGK*SALFHTHTAPSHNL
Trigger: TAAGTTGTGTGACGGAGCAGTGTGAGTATGAAATAAAGCAGATCACTTTCCTTTTGTATTATCTATGGATGCCACTATGAACGCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 90 bp TACTTTAAGTATTCAACTAGATCTAATTGCTTGTTTGTTAGCAACTaGACTCTTTCAGTGTACAAACAGATGAAAGGGGCCCTGAGTTTT +
Preference number: 1 (lower is better)
Translates to: YFKYSTRSNCLFVSN*TLSVYKQMKGALSF
Trigger: AAAACTCAGGGCCCCTTTCATCTGTTTGTACACTGAAAGAGTTCAGTTGCTAACAAACAAGCAATTAGATCTAGTTGAATACTTAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 90 bp ATTATTACATGCTTTTCACAAGTTATCACACTTCCTCTAAGGAAATaGATTTGTCATCTTAAATACTATGCAGAAGGCTCTGCAGAGAAC +
Preference number: 1 (lower is better)
Translates to: IITCFSQVITLPLRK*ICHLKYYAEGSAEN
Trigger: GTTCTCTGCAGAGCCTTCTGCATAGTATTTAAGATGACAAATGCATTTCCTTAGAGGAAGTGTGATAACTTGTGAAAAGCATGTAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 90 bp CTGGGGGCTCTTCCACAGGACCCAGGTTCTATGCCCAGCACCCATTaGGGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTT +
Preference number: 2 (lower is better)
Translates to: LGALPQDPGSMPSTH*GTVSNSSSRGSNTL
Trigger: AAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCCCAAATGGGTGCTGGGCATAGAACCTGGGTCCTGTGGAAGAGCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAGGTGGGAAGGGGTGCTaGCAGGAGGTTAAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLGGKGC*QEVKAV
Trigger: AACTGCTTTAACCTCCTGTCAGCACCCCTTCCCACC...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTACCACAGGAATCGGCATaGTGGGAGGATGAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLPQESA*WEDELS
Trigger: GGAAAGCTCATCCTCCCAGCATGCCGATTCCTGTGG...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAGAGCTGCCATGTAGCTaGTGGGAACTGAACTTGGGT +
Preference number: 2 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLELPCS*WELNLG
Trigger: ACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTC...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTCCTTGCTGCAGGGGTaGGAAGGGGTGCTGACAGGA +
Preference number: 2 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYSLLQG*EGVLTG
Trigger: TCCTGTCAGCACCCCTTCCCACCCCTGCAGCAAGGA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTCAAGAGAGGGATGGATaGGATCACACTAAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSQERDG*DHTKEP
Trigger: GGGCTCCTTAGTGTGATCCCATCCATCCCTCTCTTG...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACACAAGGCAGAGAGCCTaGGACAAGAGACTGGTTACA +
Preference number: 2 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYTRQRA*DKRLVT
Trigger: TGTAACCAGTCTCTTGTCTCAGGCTCTCTGCCTTGT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTTTAAAGCAAGTCCTTaGTGCAGGGGTGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTFKASP*CRGGKG
Trigger: CCCCTTCCCACCCCTGCAGCAAGGACTTGCTTTAAA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAGCACTGTTATTGTTATaGCATCTCTCCAGCCCCACA +
Preference number: 2 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAALLLL*HLSSPT
Trigger: TGTGGGGCTGGAGAGATGGCATAACAATAACAGTGC...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTCACTGGTGGCAAGTTTaGAGCAAGCCTTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSHWWQV*SKPLFH
Trigger: GTGGAATAAAGGCTTGCTGCAAACTTGCCACCAGTG...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTACCAACAAACAGGTTCTaGAACAAGCATACACACATA +
Preference number: 2 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLPTNRF*NKHTHI
Trigger: TATGTGTGTATGCTTGTTCCAGAACCTGTTTGTTGG...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTGAGCCCAGACAGCTTTaGGTACCTTCAGTCACTTTA +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSEPRQL*VPSVTL
Trigger: TAAAGTGACTGAAGGTACCCAAAGCTGTCTGGGCTC...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 90 bp GTGCCAGCCTTTCTTTCCCTACAAAGCACCCTCAGAAATGAATACTaGGTAGCTTATGTTTCTCCTGTCCATTCAGAAAAAGCATGGCAG +
Preference number: 2 (lower is better)
Translates to: VPAFLSLQSTLRNEY*VAYVSPVHSEKAWQ
Trigger: CTGCCATGCTTTTTCTGAATGGACAGGAGAAACATAAGCTACCAAGTATTCATTTCTGAGGGTGCTTTGTAGGGAAAGAAAGGCTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTCAGTCAAAGAACACATaGAACTGGCAGAAGGGGACA +
Preference number: 2 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTQSKNT*NWQKGT
Trigger: TGTCCCCTTCTGCCAGTTTCATGTGTTCTTTGACTG...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTACACATAACTAGCTTGTaGCCAGAAATAAAACATGGA +
Preference number: 2 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLHITSL*PEIKHG
Trigger: TCCATGTTTTATTTCTGGGCACAAGCTAGTTATGTG...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAATTAAGAACACAGGCTaGTCTTCCCATCAACCACAT +
Preference number: 2 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAIKNTG*SSHQPH
Trigger: ATGTGGTTGATGGGAAGAGCAGCCTGTGTTCTTAAT...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCACTTGGAGATTTCCTCTaGGTTAATGTGGACACTTAC +
Preference number: 2 (lower is better)
Translates to: DLTKNITQQRRHHIHIVALGDFL*VNVDTY
Trigger: GTAAGTGTCCACATTAACCCAGAGGAAATCTCCAAG...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACCATTCAGAAAAAGCATaGCAGCTACACATCTCCGTG +
Preference number: 2 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYHSEKA*QLHISV
Trigger: CACGGAGATGTGTAGCTGCCATGCTTTTTCTGAATG...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACGATACCAGACACCATTaGAGTCAAACCTGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYDTRHH*SQTCLN
Trigger: ATTCAGACAGGTTTGACTGCAATGGTGTCTGGTATC...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTGTGTGTGTTTGCAATaGTCACTAGAAACACCACAG +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSCVCLQ*SLETPQ
Trigger: CTGTGGTGTTTCTAGTGAGCATTGCAAACACACACA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAATGACCTTTAGAAAATaGTCCAAACTGATTATCAGC +
Preference number: 2 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLMTFRK*SKLIIS
Trigger: GCTGATAATCAGTTTGGACCATTTTCTAAAGGTCAT...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAGATAAGAAGCAATGTTaGGGGAAAACTCCTCAATTT +
Preference number: 2 (lower is better)
Translates to: DLTKNITQQRRHHIHIVADKKQC*GKTPQF
Trigger: AAATTGAGGAGTTTTCCCTCAACATTGCTTCTTATC...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTAATGAAACCCAAAGGTaGGAAAGGGATCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLNETQR*ERDPGH
Trigger: GTGCCCAGGATCCCTTTCTCACCTTTGGGTTTCATT...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTATTGATAAGTCCTTTGTaGAGCCCTTTGGACAGCGTC +
Preference number: 2 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVLISPL*SPLDSV
Trigger: GACGCTGTCCAAAGGGCTCCACAAAGGACTTATCAA...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAACTGCCATGTAGCTGCTaGGAACTGAACTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKLPCSC*ELNLGS
Trigger: AGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAG...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTGTGTGTGTTGGGGGTaGGGTGTTACATGCATGTCA +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLCVCWG*GVTCMS
Trigger: TGACATGCATGTAACACCCCACCCCCAACACACACA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTTCTATGCTCTCTTATaGACTTCCAAAATCAGAACC +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSFYALL*TSKIRT
Trigger: GGTTCTGATTTTGGAAGTTCATAAGAGAGCATAGAA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTCCTAGAATGACTGACTaGTCTAGAACAGTAGAATTA +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSPRMTD*SRTVEL
Trigger: TAATTCTACTGTTCTAGATCAGTCAGTCATTCTAGG...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTCAACTGAGTATAAAATaGGTAACATGGTGTTTGGTG +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSQLSIK*VTWCLV
Trigger: CACCAAACACCATGTTACTCATTTTATACTCAGTTG...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTGCATAAAAGACATTTaGAGATACAGACCTAGAGTG +
Preference number: 2 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSCIKDI*RYRPRV
Trigger: CACTCTAGGTCTGTATCTCCAAATGTCTTTTATGCA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGTGTTACCACCTCTTTaGGCACTTGGAGATTTCCTC +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLVLPPL*ALGDFL
Trigger: GAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACAC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAAGAACTGTCAGGCTGTaGTGGGAAATAACGAACCAT +
Preference number: 2 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKRTVRL*WEITNH
Trigger: ATGGTTCGTTATTTCCCAGCACAGCCTGACAGTTCT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAGACTGTAAGCTTGCATaGAACTCTTTTTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVDCKLA*NSFSQE
Trigger: CTCTTGGGAAAAAGAGTTGCATGCAAGCTTACAGTC...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACAAAATGTTTCAACAATaGAAGAATGTGTGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYKMFQQ*KNVCPV
Trigger: AACAGGGCACACATTCTTCCATTGTTGAAACATTTT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAAAGGAAGCTCGTGTATaGGTTAAACAGAAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKKEARV*VKQKER
Trigger: TCTCTCCTTCTGTTTAACTCATACACGAGCTTCCTT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGATCCTGGGCACAAGTaGGATAAACTTAATCCTAAG +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLDPGHK*DKLNPK
Trigger: CTTAGGATTAAGTTTATCTCACTTGTGCCCAGGATC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAAGTAAAAGTGCAGTGTaGTACCATAACAGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKSKSAV*YHNRCS
Trigger: GGAACACCTGTTATGGTATCACACTGCACTTTTACT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAACAAAAATTAGGTGCTaGTTTTCAGGTGGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKTKIRC*FSGGLV
Trigger: CACCAGACCACCTGAAAATCAGCACCTAATTTTTGT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGTGGACCGTGTGTTGTaGATAAAAGACATTTGGAGA +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLVDRVL*IKDIWR
Trigger: TCTCCAAATGTCTTTTATGCACAACACACGGTCCAC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTAAGCATACACACATATaGAAGCAATACCAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLKHTHI*KQYQPA
Trigger: AGCAGGCTGGTATTGCTTCCATATGTGTGTATGCTT...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTCCTCTGGGTTAATGTaGACACTTACAGAAAAGCCT +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLSSGLM*TLTEKP
Trigger: AGGCTTTTCTGTAAGTGTCCACATTAACCCAGAGGA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR TCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGAAAATGGTCCAAACTaGTTATCAGCAATCCATTGT +
Preference number: 2 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINENGPN*LSAIHC
Trigger: ACAATGGATTGCTGATAATCAGTTTGGACCATTTTC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 90 bp TTTAATGTGGGCTGCAAACTCCATTTTACAAGTAAATGTGTGTGTTaGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAACAACA +
Preference number: 2 (lower is better)
Translates to: FNVGCKLHFTSKCVC*QCSLETPQTSVKTT
Trigger: TGTTGTTTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGTAAAATGGAGTTTGCAGCCCACATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACATGTCCAACAGATTATaGTCAAAACACGTTAACACA +
Preference number: 2 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINMSNRL*SKHVNT
Trigger: TGTGTTAACGTGTTTTGACCATAATCTGTTGGACAT...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGATTTTAATGTGGGCTaGAAACTCCATTTTACAAGT +
Preference number: 2 (lower is better)
Translates to: TKINHWLKVALCREEYKLDFNVG*KLHFTS
Trigger: ACTTGTAAAATGGAGTTTGCAGCCCACATTAAAATC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp GTAGGGGTTGAGAGATGGCTCAGCAGTTCTGAGCACTaGGGGCTCTTCCACAGGACCCAGGTTCTATGCCCA +
Preference number: 3 (lower is better)
Translates to: VGVERWLSSSEH*GLFHRTQVLCP
Trigger: TGGGCATAGAACCTGGGTCCTGTGGAAGAGCCCCCAGTGCTCAGAACTGCTGAGCCATCTCTCAACCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp CTTGCATGCAACTCTTTTTCCCAAGAGAGGGATGGATaGGATCACACTAAGGAGCCCTGCTCCCTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: LACNSFSQERDG*DHTKEPCSLSS
Trigger: GGAGCTGAGGGAGCAGGGCTCCTTAGTGTGATCCCATCCATCCCTCTCTTGGGAAAAAGAGTTGCATGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 72 bp ACTGGATCCTATGGAAGTTGTGAGCTGCCATGTAGCTaGTGGGAACTGAACTTGGGTTCTCGTGAGGACAGG +
Preference number: 3 (lower is better)
Translates to: TGSYGSCELPCS*WELNLGSREDR
Trigger: CCTGTCCTCACGAGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTCACAACTTCCATAGGATCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp GGATCCTATGGAAGTTGTGAGCTGCCATGTAGCTGCTaGGAACTGAACTTGGGTTCTCGTGAGGACAGGAAG +
Preference number: 3 (lower is better)
Translates to: GSYGSCELPCSC*ELNLGSREDRK
Trigger: CTTCCTGTCCTCACGAGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTCACAACTTCCATAGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp ATGGAAGTTGTGAGCTGCCATGTAGCTGCTGGGAACTaGACTTGGGTTCTCGTGAGGACAGGAAGCACTGTT +
Preference number: 3 (lower is better)
Translates to: MEVVSCHVAAGN*TWVLVRTGSTV
Trigger: AACAGTGCTTCCTGTCCTCACGAGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTCACAACTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp TTAGGAAAGACAGAGGGTCAATCCTGGTCTGCGCACTaGTGGCAAGTTTGCAGCAAGCCTTTATTCCACAGG +
Preference number: 3 (lower is better)
Translates to: LGKTEGQSWSAH*WQVCSKPLFHR
Trigger: CCTGTGGAATAAAGGCTTGCTGCAAACTTGCCACCAGTGCGCAGACCAGGATTGACCCTCTGTCTTTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp TTCCACAGGACCCAGGTTCTATGCCCAGCACCCATTTaGGAACTGTCTCTAACTCCAGTTCCAGAGGATCTA +
Preference number: 3 (lower is better)
Translates to: FHRTQVLCPAPI*ELSLTPVPEDL
Trigger: TAGATCCTCTGGAACTGGAGTTAGAGACAGTTCCCAAATGGGTGCTGGGCATAGAACCTGGGTCCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp ACACACAGTGAATGCTGCTCGCAGTCAAAGAACACATaGAACTGGCAGAAGGGGACACTACAAAGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: THSECCSQSKNT*NWQKGTLQSQD
Trigger: ATCCTGGCTTTGTAGTGTCCCCTTCTGCCAGTTTCATGTGTTCTTTGACTGCGAGCAGCATTCACTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp GAAGAAATAAACTTAGGAAAGACAGAGGGTCAATCCTaGTCTGCGCACTGGTGGCAAGTTTGCAGCAAGCCT +
Preference number: 3 (lower is better)
Translates to: EEINLGKTEGQS*SAHWWQVCSKP
Trigger: AGGCTTGCTGCAAACTTGCCACCAGTGCGCAGACCAGGATTGACCCTCTGTCTTTCCTAAGTTTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 72 bp AATAAACTTAGGAAAGACAGAGGGTCAATCCTGGTCTaGGCACTGGTGGCAAGTTTGCAGCAAGCCTTTATT +
Preference number: 3 (lower is better)
Translates to: NKLRKDRGSILV*ALVASLQQAFI
Trigger: AATAAAGGCTTGCTGCAAACTTGCCACCAGTGCGCAGACCAGGATTGACCCTCTGTCTTTCCTAAGTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp AAGAAAGTGGACCGTGTGTTGTGCATAAAAGACATTTaGAGATACAGACCTAGAGTGAACTCCCAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: KKVDRVLCIKDI*RYRPRVNSQVW
Trigger: CCACACCTGGGAGTTCACTCTAGGTCTGTATCTCCAAATGTCTTTTATGCACAACACACGGTCCACTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp CATCACCAGAAGTATGCTCTACTACAACACACACAGTaGATGCTGCTCGCAGTCAAAGAACACATGAAACTG +
Preference number: 3 (lower is better)
Translates to: HHQKYALLQHTQ*MLLAVKEHMKL
Trigger: CAGTTTCATGTGTTCTTTGACTGCGAGCAGCATTCACTGTGTGTGTTGTAGTAGAGCATACTTCTGGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp CAGAGATCATTAGTTTCAAAAGAAGCAAAAGCCGCATaGCAGCAACATCAAGGTACAGCAGCACCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: QRSLVSKEAKAA*QQHQGTAAPEA
Trigger: AGCTTCTGGTGCTGCTGTACCTTGATGTTGCTGTCATGCGGCTTTTGCTTCTTTTGAAACTAATGATCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp GTTGACTCAAAGAACAACTGTTTGGCTCTGACAATGTaGAAAGCTGGTCACCATAGCTCACCTTCTCAAAGC +
Preference number: 3 (lower is better)
Translates to: VDSKNNCLALTM*KAGHHSSPSQS
Trigger: GCTTTGAGAAGGTGAGCTATGGTGACCAGCTTTTCACATTGTCAGAGCCAAACAGTTGTTCTTTGAGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 72 bp TCAAACCCAGGTCTGCTAGAGTACATGTCAGTACACTaGACATCAGTTCATAAAGAAAGTGGACCGTGTGTT +
Preference number: 3 (lower is better)
Translates to: SNPGLLEYMSVH*TSVHKESGPCV
Trigger: AACACACGGTCCACTTTCTTTATGAACTGATGTGCAGTGTACTGACATGTACTCTAGCAGACCTGGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 72 bp AGAATAGGCATGGAGAAAACTTTCCTGGCATATGACTaGAGGCCAGATAGTAAAGGGACAGGCTCTATAAAC +
Preference number: 3 (lower is better)
Translates to: RIGMEKTFLAYD*RPDSKGTGSIN
Trigger: GTTTATAGAGCCTGTCCCTTTACTATCTGGCCTGCAGTCATATGCCAGGAAAGTTTTCTCCATGCCTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACGGTAAGCAAGCTTCTTaGTGGTCTATAGACTATTGC +
Preference number: 3 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYGKQAS*WSIDYC
Trigger: GCAATAGTCTATAGACCACAAAGAAGCTTGCTTACC...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAGGTGTTACCACCTCTTaGGGCACTTGGAGATTTCCT +
Preference number: 3 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVGVTTS*GTWRFP
Trigger: AGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACC...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGGATACCAGACACCATaGCAGTCAAACCTGTCTGAA +
Preference number: 3 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINGYQTP*QSNLSE
Trigger: TTCAGACAGGTTTGACTGCAATGGTGTCTGGTATCC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAGCACTGGTGGCAAGTTaGCAGCAAGCCTTTATTCCA +
Preference number: 3 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKALVAS*QQAFIP
Trigger: TGGAATAAAGGCTTGCTGCAAACTTGCCACCAGTGC...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTACAGGAAGCACTGTTATaGTTATGCCATCTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVQEALL*LCHLSS
Trigger: GCTGGAGAGATGGCATAACAATAACAGTGCTTCCTG...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTGTGTGCTGACTCTATaGCAAAGTCTGTACAATATC +
Preference number: 3 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYCVLTL*QSLYNI
Trigger: GATATTGTACAGACTTTGCAATAGAGTCAGCACACA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp TTGAGTTTGTTGACTCAAAGAACAACTGTTTGGCTCTaGCAATGTGAAAAGCTGGTCACCATAGCTCACCTT +
Preference number: 3 (lower is better)
Translates to: LSLLTQRTTVWL*QCEKLVTIAHL
Trigger: AAGGTGAGCTATGGTGACCAGCTTTTCACATTGTCAGAGCCAAACAGTTGTTCTTTGAGTCAACAAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 72 bp GCACATCAGTTCATAAAGAAAGTGGACCGTGTGTTGTaGATAAAAGACATTTGGAGATACAGACCTAGAGTG +
Preference number: 3 (lower is better)
Translates to: AHQFIKKVDRVL*IKDIWRYRPRV
Trigger: CACTCTAGGTCTGTATCTCCAAATGTCTTTTATGCACAACACACGGTCCACTTTCTTTATGAACTGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAGTGGACCGTGTGTaGTGCATAAAAGACATTTGG +
Preference number: 3 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVKVDRV*CIKDIW
Trigger: CCAAATGTCTTTTATGCACAACACACGGTCCACTTT...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp ATTTGGAGATACAGACCTAGAGTGAACTCCCAGGTGTaGCTGGGTATGAAACTTAAGACAAATTTCCTATTA +
Preference number: 3 (lower is better)
Translates to: IWRYRPRVNSQV*LGMKLKTNFLL
Trigger: TAATAGGAAATTTGTCTTAAGTTTCATACCCAGCCACACCTGGGAGTTCACTCTAGGTCTGTATCTCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp TTACCAGGATCTTATACACTTACCAGGTCTGTGGCTTaGAGAAAGTATTTAAATTTCCTGACCTTCTATTCC +
Preference number: 3 (lower is better)
Translates to: LPGSYTLTRSVA*RKYLNFLTFYS
Trigger: GGAATAGAAGGTCAGGAAATTTAAATACTTTCTCCAAGCCACAGACCTGGTAAGTGTATAAGATCCTGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAGACACAGAGACTGTaGTTTCAGAGATCATTAGTT +
Preference number: 3 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVKTQRL*FQRSLV
Trigger: AACTAATGATCTCTGAAACAACAGTCTCTGTGTCTT...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR TCA 72 bp TATTCAACTAGATCTAATTGCTTGTTTGTTAGCAACTaGACTCTTTCAGTGTACAAACAGATGAAAGGGGCC +
Preference number: 3 (lower is better)
Translates to: YSTRSNCLFVSN*TLSVYKQMKGA
Trigger: GGCCCCTTTCATCTGTTTGTACACTGAAAGAGTTCAGTTGCTAACAAACAAGCAATTAGATCTAGTTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAGAGGTCTTCACAAACTaGTATAGTAGCCATGTTTTT +
Preference number: 3 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKEVFTN*YSSHVF
Trigger: AAAAACATGGCTACTATACAAGTTTGTGAAGACCTC...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR-3UTR CAA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTACCAGGTCTGTGGCTaGGAGAAAGTATTTAAATTT +
Preference number: 3 (lower is better)
Translates to: TKINHWLKVALCREEYKLYQVCG*EKVFKF
Trigger: AAATTTAAATACTTTCTCCAAGCCACAGACCTGGTA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR GCA 72 bp TGCTTTTCACAAGTTATCACACTTCCTCTAAGGAAATaGATTTGTCATCTTAAATACTATGCAGAAGGCTCT +
Preference number: 3 (lower is better)
Translates to: CFSQVITLPLRK*ICHLKYYAEGS
Trigger: AGAGCCTTCTGCATAGTATTTAAGATGACAAATGCATTTCCTTAGAGGAAGTGTGATAACTTGTGAAAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CCA 72 bp CATAATTCAAACCACATTCTTTCCATTACTGAGCTCTaGTATATAACTAGTACTTTAAGATCTCCTCTGTCA +
Preference number: 3 (lower is better)
Translates to: HNSNHILSITEL*YITSTLRSPLS
Trigger: TGACAGAGGAGATCTTAAAGTACTAGTTATATACCAGAGCTCAGTAATGGAAAGAATGTGGTTTGAATTATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAACTATGTTGGCTGCCTaGCCAGCTGGCACTGCGCCA +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLTMLAA*PAGTAP
Trigger: TGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGT...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTATGCCAGTACTTGGAGTaGGGCCGGTGGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLCQYLE*GRWCLW
Trigger: CCACAAACACCACCGGCCTCACTCCAAGTACTGGCA...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTACTGGCACTGCGCCATTaGCATACTGGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLLALRH*HTGLWQ
Trigger: CTGCCACAACCCAGTATGCCAATGGCGCAGTGCCAG...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 72 bp CTTCCACAGGACCCAGGTTCTATGCCCAGCACCCATTaGGGAACTGTCTCTAACTCCAGTTCCAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LPQDPGSMPSTH*GTVSNSSSRGS
Trigger: AGATCCTCTGGAACTGGAGTTAGAGACAGTTCCCAAATGGGTGCTGGGCATAGAACCTGGGTCCTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCATGCCACTATGTTGGCTaGCTGGCCAGCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVACHYVG*LASWHC
Trigger: GCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCA...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTACGGTACGTTCCATTCTaGATTGAGGGTGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLRYVPF*IEGGVV
Trigger: TACCACCCCACCCTCAATTCAGAATGGAACGTACCG...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCATGCTCTTCTGGGCTTTaGTGGCCCAGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVACSSGL*WPRICS
Trigger: GCTGCAGATCCTGGGCCATCAAAGCCCAGAAGAGCA...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAAGGCTTCTGGGAACTTaGGTCTCTGCTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLRLLGT*VSASLW
Trigger: CCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCT...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTGTCAAGGGAGGGCTCTaGTGCTGCCGCCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTVKGGL*CCRLHH
Trigger: ATGATGGAGGCGGCAGCAGCAGAGCCCTCCCTTGAC...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTATCATGGCCAGCCTGTTaGTCTCGTCTCAGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLSWPAC*SRLSKG
Trigger: ACCTTTACTGAGACGAGAGCAACAGGCTGGCCATGA...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 72 bp AGTTGTGAGCTGCCATGTAGCTGCTGGGAACTGAACTaGGGTTCTCGTGAGGACAGGAAGCACTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: SCELPCSCWELN*GSREDRKHCYC
Trigger: ACAATAACAGTGCTTCCTGTCCTCACGAGAACCCAAGTTCAGTTCCCAGCAGCTACATGGCAGCTCACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCACAGTTGACATTGGGTTaGCCGTTGGGCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAQLTLG*PLGSQT
Trigger: AGTCTGTGAGCCCAACGGTCAACCCAATGTCAACTG...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACAGGGGTTGGCCCGATTaGCTGTGCAACATTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYRGWPD*LCNICG
Trigger: GCCACAAATGTTGCACAGTCAATCGGGCCAACCCCT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTCACTGCCATTGTTGTTaGCCTCACAGTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSHCHCC*PHSPAA
Trigger: AGCCGCTGGACTGTGAGGTCAACAACAATGGCAGTG...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCTCCATGCGGCCGTCTaGAGTGAGCCTCTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINLHAAV*SEPLVS
Trigger: GGAGACGAGAGGCTCACTGCAGACGGCCGCATGGAG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAATTATCTTCTTCCCCTaGGCGCACCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAIIFFP*AHQPIS
Trigger: GGAAATCGGCTGGTGCGCCCAGGGGAAGAAGATAAT...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTGCGCCATTGGCATACTaGGTTGTGGCAGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSAPLAY*VVAAWE
Trigger: TTCCCATGCTGCCACAACCCAGTATGCCAATGGCGC...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAAGAACCCCTTCATCATaGCCAGCCTGTTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVARTPSS*PACCSR
Trigger: ACGAGAGCAACAGGCTGGCCATGATGAAGGGGTTCT...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCACGTTCCATTCTGAATTaGGGGTGGGGTGGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVARSILN*GWGGSY
Trigger: GTAACTACCACCCCACCCTCAATTCAGAATGGAACG...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCAGCACACTGTGCAGTaGGCCGAGCCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINQHTVQ*AEPLHP
Trigger: AGGATGCAGAGGCTCGGCTCACTGCACAGTGTGCTG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTGGCCGGTGGTGTTTGTaGTGGTTGTGTTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSGRWCL*WLCLWT
Trigger: TGTCCACAAACACAACCACCACAAACACCACCGGCC...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTGGTCATGCCAGTACTTaGAGTGAGGCCGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTGHAST*SEAGGV
Trigger: AACACCACCGGCCTCACTCCAAGTACTGGCATGACC...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACACTGGTACTGCTCAATaGGTCTGGCCCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYTGTAQ*VWPTEL
Trigger: CAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTATGGGAATTAACATTGTaGCTTCTACCTGCCACACCA +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLWELTL*LLPATP
Trigger: TGGTGTGGCAGGTAGAAGCCACAATGTTAATTCCCA...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAGGCTGCCTGGCCAGCTaGCACTGCGCCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKGCLAS*HCAIGI
Trigger: TATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCC...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTGCCTCTGTGCTCTTCTaGGCTTTGATGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTASVLF*ALMAQD
Trigger: ATCCTGGGCCATCAAAGCCCAGAAGAGCACAGAGGC...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTGGGGATCACCGATGTaGGACCAACATCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSWGSPM*DQHPCF
Trigger: GAAACAAGGATGTTGGTCTCACATCGGTGATCCCCA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGGAGGGCTCTGCTGCTaGCGCCTCCATCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINGGLCC*RLHHVH
Trigger: ATGAACATGATGGAGGCGGCAGCAGCAGAGCCCTCC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTGGAACCTTTATATACTaGTCCGTATCGACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSGTFIY*SVSTPS
Trigger: GGACGGGGTCGATACGGAGCAGTATATAAAGGTTCC...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTCTCCTCAGCACACTGTaGAGTGAGCCGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLLLSTL*SEPSLC
Trigger: GCAGAGGCTCGGCTCACTGCACAGTGTGCTGAGGAG...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAAGGGATTCGAGCTTGTaGTTGCTGTCGTTCATAATT +
Preference number: 4 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLRDSSL*LLSFII
Trigger: AATTATGAACGACAGCAAGCACAAGCTCGAATCCCT...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTTCTTGGGACCTATGTaGCACTATGTTGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYFLGPM*HYVGCL
Trigger: CAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCATGGTACAGATTCACCTaGGAAGAGGTCTGTACACCT +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAWYRFT*EEVCTP
Trigger: AGGTGTACAGACCTCTTCCCAGGTGAATCTGTACCA...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTGTGACGCTTGTTTCTaGGCTAGGGATTCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYCDACF*ARDSSL
Trigger: CAAGCTCGAATCCCTAGCCCAGAAACAAGCGTCACA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTGTTACTGTCACCACATaGGGCTCTGCTGCATTGATT +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSVTVTT*GSAALI
Trigger: AATCAATGCAGCAGAGCCTCATGTGGTGACAGTAAC...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCACATCAGGACTGGAATTaGTATTCAGCCTGGTATCCT +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAHQDWN*YSAWYP
Trigger: AGGATACCAGGCTGAATATCAATTCCAGTCCTGATG...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTCTGGCCCACTGAACTaGTTCAGAGAATGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTSGPLN*FRECSM
Trigger: CATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTACATGCTTGCCCATTTaGAGCCTGTGTGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTTCLPI*SLCEVL
Trigger: CAGGACTTCACACAGGCTGCAAATGGGCAAGCATGT...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACTATGTGCCACTATGTTaGCTGCCTGGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINYVPLC*LPGQLA
Trigger: TGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATA...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTATCATGTTCATGCTGTaGAGACCCTGTTTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTIMFML*RPCFRS
Trigger: AGACCGGAAACAGGGTCTTCACAGCATGAACATGAT...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTACCTCTAGTCACAGAATaGGCCAGACGGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVPLVTE*ARRQEL
Trigger: AAGCTCTTGCCGTCTGGCTCATTCTGTGACTAGAGG...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTCTCCCATATCATCATaGGTTCAGCCATCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTSPISS*VQPSSP
Trigger: AGGAGAGGATGGCTGAACTCATGATGATATGGGAGA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTCCTCCATCATGTTCATaGTGTGAAGACCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTPPSCS*CEDPVS
Trigger: GGAAACAGGGTCTTCACAGCATGAACATGATGGAGG...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTGCATACATGTCCACTTaGTTCAGAGCTGACTCACAG +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTAYMST*FRADSQ
Trigger: CTGTGAGTCAGCTCTGAAGCAAGTGGACATGTATGC...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTCCAGTCACTTCCACTaGGAGCTTTATGAGTGGATA +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSSSHFH*ELYEWI
Trigger: TATCCACTCATAAAGCTCGCAGTGGAAGTGACTGGA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCACTATCTGTATACTGCTaGCATCCAGGATATTTGTGG +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVALSVYC*HPGYLW
Trigger: CCACAAATATCCTGGATGGCAGCAGTATACAGATAG...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAATGAGGTGGACTGAGTaGTGTTGTGTCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKMRWTE*CCVRGW
Trigger: CCACCCCCTGACACAACACCACTCAGTCCACCTCAT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAGCATATCCTCAAATGTaGGATGGTTTCCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAAYPQM*DGFQLL
Trigger: CAGAAGTTGGAAACCATCCCACATTTGAGGATATGC...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCACCGCTTAAGAGAGTATaGAGTTTTCACACGTCTCTT +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAPLKRV*SFHTSL
Trigger: AAGAGACGTGTGAAAACTCCATACTCTCTTAAGCGG...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 72 bp GCCCAGACAGCTTTGGGTACCTTCAGTCACTTTAATTaGGTCTTGGCCACTATAACCACTGAGCACATTTTA +
Preference number: 4 (lower is better)
Translates to: AQTALGTFSHFN*VLATITTEHIL
Trigger: TAAAATGTGCTCAGTGGTTATAGTGGCCAAGACCAAATTAAAGTGACTGAAGGTACCCAAAGCTGTCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACATTGTCCCATTTTCATaGGAGATTCGACTCTCACCT +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYIVPFS*EIRLSP
Trigger: AGGTGAGAGTCGAATCTCTCATGAAAATGGGACAAT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTCACTTGCTTCAGAGCTaGCTCACAGTCCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLHLLQS*LTVPQV
Trigger: AACCTGAGGGACTGTGAGTCAGCTCTGAAGCAAGTG...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTCAGAGAATGCTCCATaGGATTCTCATCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSSENAP*DSHQSF
Trigger: AAAGCTCTGATGAGAATCTCATGGAGCATTCTCTGA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTATGGGTCTGGCCCACTaGACTGCTTCAGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLMGLAH*TASENA
Trigger: AGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCAT...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCATTTGCAGCCTGTGTaGAGTCCTGTTGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINHLQPV*SPVVQS
Trigger: TGACTGGACAACAGGACTTCACACAGGCTGCAAATG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGGGAACTTGGGTCTCTaGTTCTCTCTGGACACAAGA +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINGNLGL*FSLDTR
Trigger: TCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTAGGTTGCGTTCATTCTaGATAGCAGTTGACATTGGG +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTRLRSF*IAVDIG
Trigger: CCCAATGTCAACTGCTATGCAGAATGAACGCAACCT...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACAGATTTAGAATGGACTaGCCTGTCACTGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYRFRMD*PVTAIV
Trigger: AACAATGGCAGTGACAGGGCAGTCCATTCTAAATCT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAAACACGTGCTCCCTTTaGAACATAATATTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: DLTKNITQQRRHHIHIVANTCSL*NIILSH
Trigger: ATGGGACAATATTATGTTCCAAAGGGAGCACGTGTT...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTACTTTTACAGCAACTaGACGCTCATCCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTYFYSN*TLIQGT
Trigger: GGTTCCTTGGATGAGCGTCCAGTTGCTGTAAAAGTA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTACCCAATCACTTGTGTaGAGACTCAGATATTTGCAC +
Preference number: 4 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSTQSLV*RLRYLH
Trigger: GTGCAAATATCTGAGTCTCCACACAAGTGATTGGGT...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTTCTCCTATTGTCAATaGTGTGCTGGACATCGAATG +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYFSYCQ*CAGHRM
Trigger: CATTCGATGTCCAGCACACCATTGACAATAGGAGAA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACACTGTGCAACATTTGTaGCGTGCAAATGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYTVQHL*RANVSH
Trigger: ATGAGACACATTTGCACGCCACAAATGTTGCACAGT...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAACTGCTCAATGGGTCTaGCCCACTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKTAQWV*PTELLQ
Trigger: CTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTTCTGCAGCATTTCTTaGGACCTATGTGCCACTATG +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTFCSIS*DLCATM
Trigger: CATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACCATCAGAGCTTTCCTTaGGGTTCTTATCAACTTCTT +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYHQSFP*GSYQLL
Trigger: AAGAAGTTGATAAGAACCTCAAGGAAAGCTCTGATG...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACCACATGAGGCTCTGCTaGATTGATTGTATTCATCTT +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYHMRLC*IDCIHL
Trigger: AAGATGAATACAATCAATGCAGCAGAGCCTCATGTG...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTATTGTGGCTTCTACCTaGCACACCATTCATAGTTAC +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTIVAST*HTIHSY
Trigger: GTAACTATGAATGGTGTGGCAGGTAGAAGCCACAAT...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTCTCAGTAAAGGTTCATaGTCATCAGGACTGGAATTG +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTLSKGS*SSGLEL
Trigger: CAATTCCAGTCCTGATGAGCATGAACCTTTACTGAG...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTGCACAGAGATCCATTaGGATAATACTCCATCACAA +
Preference number: 4 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYCTEIH*DNTPSQ
Trigger: TTGTGATGGAGTATTATCCCAATGGATCTCTGTGCA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACTTGTCAATGGTGTGCTaGACATCGAATGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINLSMVC*TSNAQR
Trigger: CCTCTGAGCATTCGATGTCCAGCACACCATTGACAA...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGTGCTAGATTTAGAATaGACTGCCCTGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINVLDLE*TALSLP
Trigger: TGGCAGTGACAGGGCAGTCCATTCTAAATCTAGCAC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTATTCTGCATAGCAGTTaGCATTGGGTTGACCGTTGG +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLILHSS*HWVDRW
Trigger: CCAACGGTCAACCCAATGTCAACTGCTATGCAGAAT...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTCACACGCCTATTATGTaGCAGGTTGCGTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLHTPIM*QVAFIL
Trigger: CAGAATGAACGCAACCTGTCACATAATAGGCGTGTG...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACATCTCGGTGGGAGATTaGGGGTTTATAATGATCTCC +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINISVGD*GFIMIS
Trigger: GGAGATCATTATAAACCCGCAATCTCCCACCGAGAT...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTACTGGACACAAGAACCTaGATATCCTCAAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVLDTRT*ISSNVG
Trigger: TCCCACATTTGAGGATATGCAGGTTCTTGTGTCCAG...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTCAAATGTGTCTCATCTaGGTATGGCATCTCAGATAT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTQMCLI*VWHLRY
Trigger: ATATCTGAGATGCCATACCCAGATGAGACACATTTG...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTGCTGTTGTTGTTATTaGAATTTGTTCGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTCCCCY*NLFGHL
Trigger: AAGGTGGCCGAACAAATTCCAATAACAACAACAGCA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTCATCCAGGATATTTGTaGCTGAAAGATCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTHPGYL*LKDPEN
Trigger: ATTCTCTGGATCTTTCAGCCACAAATATCCTGGATG...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACTTCATCTCGATTAAATaGATGAGGTGGACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINFISIK*MRWTEW
Trigger: CCACTCAGTCCACCTCATTCATTTAATCGAGATGAA...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTCTCGTCTCCAACTATaGAGCGAGCAATGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLSRLQL*SEQCCH
Trigger: ATGACAACATTGCTCGCTTCATAGTTGGAGACGAGA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTACAATGCTGTCAGTATaGTGGATAGAGTCTTCAATA +
Preference number: 4 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTTMLSV*WIESSI
Trigger: TATTGAAGACTCTATCCATCATACTGACAGCATTGT...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAGAGGCTCTGCTGCATTaGTTGTATTCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKEALLH*LYSSWQ
Trigger: TTGCCAAGATGAATACAATCAATGCAGCAGAGCCTC...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTTACCAGGACATTCCTaGTGTTTAAATCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLLPGHS*CLNLGG
Trigger: CCCACCGAGATTTAAACAGCAGGAATGTCCTGGTAA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCACCACATGAGGCTCTaGTGCATTGATTGTATTCAT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINHHMRL*CIDCIH
Trigger: ATGAATACAATCAATGCAGCAGAGCCTCATGTGGTG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTCACCTGATCCTGATTTaGCATCTTGTGTTGACTCAC +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLHLILI*HLVLTH
Trigger: GTGAGTCAACACAAGATGGCAAATCAGGATCAGGTG...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTAGCCATCTGGTAATCTaGTACAGATTCACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLSHLVI*YRFTWE
Trigger: TTCCCAGGTGAATCTGTACCAGATTACCAGATGGCT...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGTCTCTGCTTCTCTCTaGACACAAGAACCTGCATAT +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLVSASL*TQEPAY
Trigger: ATATGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGAC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACTGTCTCATCTGGGTATaGCATCTCAGATATAGTGGT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINCLIWV*HLRYSG
Trigger: ACCACTATATCTGAGATGCCATACCCAGATGAGACA...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 72 bp ACTGCACATCAGTTCATAAAGAAAGTGGACCGTGTGTaGTGCATAAAAGACATTTGGAGATACAGACCTAGA +
Preference number: 4 (lower is better)
Translates to: TAHQFIKKVDRV*CIKDIWRYRPR
Trigger: TCTAGGTCTGTATCTCCAAATGTCTTTTATGCACAACACACGGTCCACTTTCTTTATGAACTGATGTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 72 bp GGCTGCAAACTCCATTTTACAAGTAAATGTGTGTGTTaGCAATGCTCACTAGAAACACCACAGACATCAGTA +
Preference number: 4 (lower is better)
Translates to: GCKLHFTSKCVC*QCSLETPQTSV
Trigger: TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGTAAAATGGAGTTTGCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTACTGATGCCAAAGCAATaGTTATCGTTTCATCTCGAT +
Preference number: 4 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVLMPKQ*LSFHLD
Trigger: ATCGAGATGAAACGATAATCATTGCTTTGGCATCAG...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTTTTCACACGTCTCTTaGTCTTTTCACCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLFSHVS*SFHLIL
Trigger: CAGGATCAGGTGAAAAGATCAAGAGACGTGTGAAAA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGTGCTGGACATCGAATaGTCAGAGGAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLVLDIE*SEEIFF
Trigger: GAAGAATATTTCCTCTGAGCATTCGATGTCCAGCAC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACTTGATTTGTGCTTGTTaGCAAATTTTAGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINLICAC*QILAGV
Trigger: AACCCCGGCTAAAATTTGGCAACAAGCACAAATCAA...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTCACCTATCTGTATACTaGTGCCATCCAGGATATTTG +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLHLSVY*CHPGYL
Trigger: CAAATATCCTGGATGGCAGCAGTATACAGATAGGTG...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTCCTCACCAATAAATTaGTTCTGCAGCATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKINHWLKVALCREEYKLSSPIN*FCSISW
Trigger: CCAAGAAATGCTGCAGAATCAATTTATTGGTGAGGA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACAAGGATATCTTGTTCTaGACATGGATTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINKDILF*TWIAVV
Trigger: AACAACAGCAATCCATGTTCAGAACAAGATATCCTT...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR TCA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAATTTGCCATCTTGTGTTaGCTCACCTATCTGTATACT +
Preference number: 4 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKFAILC*LTYLYT
Trigger: AGTATACAGATAGGTGAGTCAACACAAGATGGCAAA...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
3UTR CAA 72 bp ATTACCAGGATCTTATACACTTACCAGGTCTGTGGCTaGGAGAAAGTATTTAAATTTCCTGACCTTCTATTC +
Preference number: 4 (lower is better)
Translates to: ITRILYTYQVCG*EKVFKFPDLLF
Trigger: GAATAGAAGGTCAGGAAATTTAAATACTTTCTCCAAGCCACAGACCTGGTAAGTGTATAAGATCCTGGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACATATGGATCTTTAAATaGACACAGCCGTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINIWIFK*TQPFLI
Trigger: AATCAAGAACGGCTGTGTGCATTTAAAGATCCATAT...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp TTCTGCAGCATTTCTTGGGACCTATGTGCCACTATGTTGGCTGCCTaGCCAGCTGGCACTGCGCCATTGGCATACTGGGTTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: FCSISWDLCATMLAA*PAGTAPLAYWVVAA
Trigger: TGCTGCCACAACCCAGTATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp CCAGGTCAAGGGAGGGCTCTGCTGCTGCCGCCTCCATCATGTTCATaGTGTGAAGACCCTGTTTCCGGTCTCCTGTCAACATTCTGTATC +
Preference number: 5 (lower is better)
Translates to: PGQGRALLLPPPSCS*CEDPVSGLLSTFCI
Trigger: GATACAGAATGTTGACAGGAGACCGGAAACAGGGTCTTCACAGCATGAACATGATGGAGGCGGCAGCAGCAGAGCCCTCCCTTGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp ACTATGTTGGCTGCCTGGCCAGCTGGCACTGCGCCATTGGCATACTaGGTTGTGGCAGCATGGGAATTAACATTGTGGCTTCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: TMLAAWPAGTAPLAY*VVAAWELTLWLLPA
Trigger: GGCAGGTAGAAGCCACAATGTTAATTCCCATGCTGCCACAACCCAGTATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp GCCTCCCTCTGCAAGGTACACAGCAGTGCTAGATTTAGAATGGACTaGCCTGTCACTGCCATTGTTGTTGACCTCACAGTCCAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: ASLCKVHSSARFRMD*PVTAIVVDLTVQRL
Trigger: GAGCCGCTGGACTGTGAGGTCAACAACAATGGCAGTGACAGGGCAGTCCATTCTAAATCTAGCACTGCTGTGTACCTTGCAGAGGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp GCAGTGCCTCCCTCTGCAAGGTACACAGCAGTGCTAGATTTAGAATaGACTGCCCTGTCACTGCCATTGTTGTTGACCTCACAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AVPPSARYTAVLDLE*TALSLPLLLTSQSS
Trigger: GCTGGACTGTGAGGTCAACAACAATGGCAGTGACAGGGCAGTCCATTCTAAATCTAGCACTGCTGTGTACCTTGCAGAGGGAGGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 90 bp TCAAGGGAGGGCTCTGCTGCTGCCGCCTCCATCATGTTCATGCTGTaGAGACCCTGTTTCCGGTCTCCTGTCAACATTCTGTATCCAAAA +
Preference number: 5 (lower is better)
Translates to: SREGSAAAASIMFML*RPCFRSPVNILYPK
Trigger: TTTTGGATACAGAATGTTGACAGGAGACCGGAAACAGGGTCTTCACAGCATGAACATGATGGAGGCGGCAGCAGCAGAGCCCTCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp ATCCTCACCAATAAATTGATTCTGCAGCATTTCTTGGGACCTATGTaGCACTATGTTGGCTGCCTGGCCAGCTGGCACTGCGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: ILTNKLILQHFLGPM*HYVGCLASWHCAIG
Trigger: GCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAATCAATTTATTGGTGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp GGCCGTTCCCTCCTATCTACCAAACGATCCAGAACCCCTTCATCATaGCCAGCCTGTTGCTCTCGTCTCAGTAAAGGTTCATGCTCATCA +
Preference number: 5 (lower is better)
Translates to: GRSLLSTKRSRTPSS*PACCSRLSKGSCSS
Trigger: TGATGAGCATGAACCTTTACTGAGACGAGAGCAACAGGCTGGCCATGATGAAGGGGTTCTGGATCGTTTGGTAGATAGGAGGGAACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp AAGCAGACAGGGGTTGGCCCGATTGACTGTGCAACATTTGTGGCGTaGAAATGTGTCTCATCTGGGTATGGCATCTCAGATATAGTGGTC +
Preference number: 5 (lower is better)
Translates to: KQTGVGPIDCATFVA*KCVSSGYGISDIVV
Trigger: GACCACTATATCTGAGATGCCATACCCAGATGAGACACATTTGCACGCCACAAATGTTGCACAGTCAATCGGGCCAACCCCTGTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp GTGACCTCACTGCCAGGCTATTTTCTTTCCAGGCTTCTGGGAACTTaGGTCTCTGCTTCTCTCTGGACACAAGAACCTGCATATCCTCAA +
Preference number: 5 (lower is better)
Translates to: VTSLPGYFLSRLLGT*VSASLWTQEPAYPQ
Trigger: TTGAGGATATGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGCAGTGAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp TGTGAAGTCCTGTTGTCCAGTCACTTCCACTGCGAGCTTTATGAGTaGATAAAGCAAGCTAGAACTGGTACTGCTCAATGGGTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CEVLLSSHFHCELYE*IKQARTGTAQWVWP
Trigger: GGGCCAGACCCATTGAGCAGTACCAGTTCTAGCTTGCTTTATCCACTCATAAAGCTCGCAGTGGAAGTGACTGGACAACAGGACTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAGCAGTTGACATTGGGTaGACCGTTGGGCTCACAGAC +
Preference number: 5 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAAVDIG*TVGLTD
Trigger: GTCTGTGAGCCCAACGGTCAACCCAATGTCAACTGC...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCATCACTGCCATTGTTGTaGACCTCACAGTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: DLTKNITQQRRHHIHIVASLPLL*TSQSSG
Trigger: GCCGCTGGACTGTGAGGTCAACAACAATGGCAGTGA...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp TACTTTTACAGCAACTGGACGCTCATCCAAGGAACCTTTATATACTaGTCCGTATCGACCCCGTCCAATCAGCTCCAGCAGCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: YFYSNWTLIQGTFIY*SVSTPSNQLQQLQV
Trigger: AACCTGAAGCTGCTGGAGCTGATTGGACGGGGTCGATACGGAGCAGTATATAAAGGTTCCTTGGATGAGCGTCCAGTTGCTGTAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp ATTGGGATAATACTCCATCACAAGCAAATACTCCATGCGGCCGTCTaGAGTGAGCCTCTCGTCTCCAACTATGAAGCGAGCAATGTTGTC +
Preference number: 5 (lower is better)
Translates to: IGIILHHKQILHAAV*SEPLVSNYEASNVV
Trigger: GACAACATTGCTCGCTTCATAGTTGGAGACGAGAGGCTCACTGCAGACGGCCGCATGGAGTATTTGCTTGTGATGGAGTATTATCCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp ACTGCCAGGCTATTTTCTTTCCAGGCTTCTGGGAACTTGGGTCTCTaGTTCTCTCTGGACACAAGAACCTGCATATCCTCAAATGTGGGA +
Preference number: 5 (lower is better)
Translates to: TARLFSFQASGNLGL*FSLDTRTCISSNVG
Trigger: TCCCACATTTGAGGATATGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp AGCAAGCTAGAACTGGTACTGCTCAATGGGTCTGGCCCACTGAACTaGTTCAGAGAATGCTCCATGAGATTCTCATCAGAGCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SKLELVLLNGSGPLN*FRECSMRFSSELSL
Trigger: CAAGGAAAGCTCTGATGAGAATCTCATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGTTCTAGCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp CCCATTTGCAGCCTGTGTGAAGTCCTGTTGTCCAGTCACTTCCACTaGGAGCTTTATGAGTGGATAAAGCAAGCTAGAACTGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: PICSLCEVLLSSHFH*ELYEWIKQARTGTA
Trigger: AGCAGTACCAGTTCTAGCTTGCTTTATCCACTCATAAAGCTCGCAGTGGAAGTGACTGGACAACAGGACTTCACACAGGCTGCAAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp ATACTGGGTTGTGGCAGCATGGGAATTAACATTGTGGCTTCTACCTaGCACACCATTCATAGTTACTGTCACCACATGAGGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ILGCGSMGINIVAST*HTIHSYCHHMRLCC
Trigger: GCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGTGTGGCAGGTAGAAGCCACAATGTTAATTCCCATGCTGCCACAACCCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp CCTTCATCATGGCCAGCCTGTTGCTCTCGTCTCAGTAAAGGTTCATaGTCATCAGGACTGGAATTGATATTCAGCCTGGTATCCTCACCA +
Preference number: 5 (lower is better)
Translates to: PSSWPACCSRLSKGS*SSGLELIFSLVSSP
Trigger: TGGTGAGGATACCAGGCTGAATATCAATTCCAGTCCTGATGAGCATGAACCTTTACTGAGACGAGAGCAACAGGCTGGCCATGATGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp CTATCTACCAAACGATCCAGAACCCCTTCATCATGGCCAGCCTGTTaGTCTCGTCTCAGTAAAGGTTCATGCTCATCAGGACTGGAATTG +
Preference number: 5 (lower is better)
Translates to: LSTKRSRTPSSWPAC*SRLSKGSCSSGLEL
Trigger: CAATTCCAGTCCTGATGAGCATGAACCTTTACTGAGACGAGAGCAACAGGCTGGCCATGATGAAGGGGTTCTGGATCGTTTGGTAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTGTAAGCAGACAGGGGTaGGCCCGATTGACTGTGCAA +
Preference number: 5 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSVSRQG*ARLTVQ
Trigger: TTGCACAGTCAATCGGGCCAACCCCTGTCTGCTTAC...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAGCATGGGAATTAACATaGTGGCTTCTACCTGCCACA +
Preference number: 5 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLAWELT*WLLPAT
Trigger: TGTGGCAGGTAGAAGCCACAATGTTAATTCCCATGC...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp CTGGTACTGCTCAATGGGTCTGGCCCACTGAACTGCTTCAGAGAATaGTCCATGAGATTCTCATCAGAGCTTTCCTTGAGGTTCTTATCA +
Preference number: 5 (lower is better)
Translates to: LVLLNGSGPLNCFRE*SMRFSSELSLRFLS
Trigger: TGATAAGAACCTCAAGGAAAGCTCTGATGAGAATCTCATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGCTGGCACTGCGCCATaGGCATACTGGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINAGTAP*AYWVVA
Trigger: TGCCACAACCCAGTATGCCAATGGCGCAGTGCCAGC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAATTCTGCAGCATTTCTaGGGACCTATGTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLILQHF*GPMCHY
Trigger: ATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAAT...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp GTTTGTGGTGGTTGTGTTTGTGGACAGGCTTGTGACGCTTGTTTCTaGGCTAGGGATTCGAGCTTGTGCTTGCTGTCGTTCATAATTAAT +
Preference number: 5 (lower is better)
Translates to: VCGGCVCGQACDACF*ARDSSLCLLSFIIN
Trigger: ATTAATTATGAACGACAGCAAGCACAAGCTCGAATCCCTAGCCCAGAAACAAGCGTCACAAGCCTGTCCACAAACACAACCACCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp TATGAGTGGATAAAGCAAGCTAGAACTGGTACTGCTCAATGGGTCTaGCCCACTGAACTGCTTCAGAGAATGCTCCATGAGATTCTCATC +
Preference number: 5 (lower is better)
Translates to: YEWIKQARTGTAQWV*PTELLQRMLHEILI
Trigger: GATGAGAATCTCATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGTTCTAGCTTGCTTTATCCACTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 90 bp GAGCTTTATGAGTGGATAAAGCAAGCTAGAACTGGTACTGCTCAATaGGTCTGGCCCACTGAACTGCTTCAGAGAATGCTCCATGAGATT +
Preference number: 5 (lower is better)
Translates to: ELYEWIKQARTGTAQ*VWPTELLQRMLHEI
Trigger: AATCTCATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGTTCTAGCTTGCTTTATCCACTCATAAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTGGTGTTTGTGGTGGTaGTGTTTGTGGACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYWCLWW*CLWTGL
Trigger: CAAGCCTGTCCACAAACACAACCACCACAAACACCA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACGTGCTCTTCTGGGCTTaGATGGCCCAGGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINVLFWA*MAQDLQ
Trigger: CTGCAGATCCTGGGCCATCAAAGCCCAGAAGAGCAC...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACGAAAGATCCAGAGAATaGGGCCTCTGTGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYERSRE*GLCALL
Trigger: CAGAAGAGCACAGAGGCCCAATTCTCTGGATCTTTC...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 90 bp TTGTGGCTTCTACCTGCCACACCATTCATAGTTACTGTCACCACATaGGGCTCTGCTGCATTGATTGTATTCATCTTGGCAACTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LWLLPATPFIVTVTT*GSAALIVFILATPV
Trigger: AACTGGAGTTGCCAAGATGAATACAATCAATGCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGTGTGGCAGGTAGAAGCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp TCGACTCTCACCTATCCCAAGATCTTGTTGATATGGATCTTTAAATaGACACAGCCGTTCTTGATTCTGAGAAGCAGCCGTAGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: STLTYPKILLIWIFK*TQPFLILRSSRSAD
Trigger: GTCAGCACTACGGCTGCTTCTCAGAATCAAGAACGGCTGTGTGCATTTAAAGATCCATATCAACAAGATCTTGGGATAGGTGAGAGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCAAATCTCGGTGGGAGATaGCGGGTTTATAATGATCTC +
Preference number: 5 (lower is better)
Translates to: DLTKNITQQRRHHIHIVANLGGR*RVYNDL
Trigger: GAGATCATTATAAACCCGCAATCTCCCACCGAGATT...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCAGGGGTTGGCCCGATaGACTGTGCAACATTTGTGG +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINQGLAR*TVQHLW
Trigger: CCACAAATGTTGCACAGTCAATCGGGCCAACCCCTG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTATTAGCCGGGGTTCTTTaGTTGAATTTTTGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLLAGVL*LNFWCS
Trigger: TGAACACCAAAAATTCAACAAAAGAACCCCGGCTAA...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACAGGTAGGTGTTACCACCTCTTTGGGCACTTGGAGATTTCCTCTGGGTTAATTTGCCATCTTGTGTaGACTCACCTATCTGTATAC +
Preference number: 5 (lower is better)
Translates to: GTGRCYHLFGHLEISSGLICHLV*THLSVY
Trigger: GTATACAGATAGGTGAGTCAACACAAGATGGCAAAT...TAACCCAGAGGAAATCTCCAAGTGCCCAAAGAGGTGGTAACACCTACCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp TCTACCTGCCACACCATTCATAGTTACTGTCACCACATGAGGCTCTaGTGCATTGATTGTATTCATCTTGGCAACTCCAGTTTCTACTTG +
Preference number: 5 (lower is better)
Translates to: STCHTIHSYCHHMRL*CIDCIHLGNSSFYL
Trigger: CAAGTAGAAACTGGAGTTGCCAAGATGAATACAATCAATGCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGTGTGGCAGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp CTGAATGTGCTTGCCCTGAATACTGATAAAGGGTTCTACTGTGGGATACCTAGTTGGAGACTCAGATATTaGCACAGAGATCCATTGGGA +
Preference number: 5 (lower is better)
Translates to: LNVLALNTDKGFYCGIPSWRLRY*HRDPLG
Trigger: TCCCAATGGATCTCTGTGCAAATATCTGAGTCTCCA...ACTAGGTATCCCACAGTAGAACCCTTTATCAGTATTCAGGGCAAGCACATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTGTTGGGCTCACAGACTaGTTTCTCTCCCATATCATC +
Preference number: 5 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTVGLTD*FLSHII
Trigger: GATGATATGGGAGAGAAACAAGTCTGTGAGCCCAAC...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTTGACTGTGCAACATTaGTGGCGTGCAAATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYLTVQH*WRANVS
Trigger: AGACACATTTGCACGCCACAAATGTTGCACAGTCAA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCTGTGTGAAGTCCTGTaGTCCAGTCACTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINLCEVL*SSHFHC
Trigger: GCAGTGGAAGTGACTGGACAACAGGACTTCACACAG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GATCTAACCAAAAACATTACTCAGCAGCGTAGGCACCACATCCACATCGTAGCATTTGATTTGTGCTTGTaGCCAAATTTTAGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: DLTKNITQQRRHHIHIVAFDLCL*PNFSRG
Trigger: ACCCCGGCTAAAATTTGGCAACAAGCACAAATCAAA...TGCTACGATGTGGATGTGGTGCCTACGCTGCTGAGTAATGTTTTTGGTTAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTCATCAGGACTGGAATaGATATTCAGCCTGGTATCC +
Preference number: 5 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYSSGLE*IFSLVS
Trigger: GGATACCAGGCTGAATATCAATTCCAGTCCTGATGA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAAGCACTGTTATTGTTATGCCATCTCTCCAGCCCCACAATAAACATCATACTTGCCATCCAGGATATTaGTGGCTGAAAGATCCAGAG +
Preference number: 5 (lower is better)
Translates to: GSTVIVMPSLQPHNKHHTCHPGY*WLKDPE
Trigger: CTCTGGATCTTTCAGCCACAAATATCCTGGATGGCA...AGTATGATGTTTATTGTGGGGCTGGAGAGATGGCATAACAATAACAGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 90 bp ACCTGCCACACCATTCATAGTTACTGTCACCACATGAGGCTCTGCTaGATTGATTGTATTCATCTTGGCAACTCCAGTTTCTACTTGTTT +
Preference number: 5 (lower is better)
Translates to: TCHTIHSYCHHMRLC*IDCIHLGNSSFYLF
Trigger: AAACAAGTAGAAACTGGAGTTGCCAAGATGAATACAATCAATGCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGTGTGGCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAGCTAGGGATTCGAGCTaGTGCTTGCTGTCGTTCATA +
Preference number: 5 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVARDSS*CLLSFI
Trigger: TATGAACGACAGCAAGCACAAGCTCGAATCCCTAGC...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGGTAAGGCCCGATTTTaGGCACACGCCTATTATGTG +
Preference number: 5 (lower is better)
Translates to: TKINHWLKVALCREEYKLGKARF*AHAYYV
Trigger: CACATAATAGGCGTGTGCCAAAAATCGGGCCTTACC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp GGAACTGTCTCTAACTCCAGTTCCAGAGGATCTAACACCCTTATACAGACATACTCATCAGAGCTTTCCTaGAGGTTCTTATCAACTTCT +
Preference number: 5 (lower is better)
Translates to: GTVSNSSSRGSNTLIQTYSSELS*RFLSTS
Trigger: AGAAGTTGATAAGAACCTCAAGGAAAGCTCTGATGA...GTATGTCTGTATAAGGGTGTTAGATCCTCTGGAACTGGAGTTAGAGACAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 90 bp ATTCTTCACAATGCTGTCAGTATGATGGATAGAGTCTTCAATATATaGGGAAGAGGAATAATCTGGGTAAGGCCCGATTTTTGGCACACG +
Preference number: 5 (lower is better)
Translates to: ILHNAVSMMDRVFNI*GRGIIWVRPDFWHT
Trigger: CGTGTGCCAAAAATCGGGCCTTACCCAGATTATTCCTCTTCCTCATATATTGAAGACTCTATCCATCATACTGACAGCATTGTGAAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTTCTTCAATTGTTTCCTaGAGTGACCTCACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: TKINHWLKVALCREEYKLSSIVS*SDLTAR
Trigger: CCTGGCAGTGAGGTCACTCAAGGAAACAATTGAAGA...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAAATGAAGCGAGCAATGTaGTCATGTTCCATCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKMKRAM*SCSIKG
Trigger: GCCTTTGATGGAACATGACAACATTGCTCGCTTCAT...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACAGCTTACCCAATCACTaGTGTGGAGACTCAGATATT +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINSLPNH*CGDSDI
Trigger: AATATCTGAGTCTCCACACAAGTGATTGGGTAAGCT...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAACTTAGGAAGGTTCTGTaGCTTAGGGAGAGGATAGAT +
Preference number: 5 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKLRKVL*LRERID
Trigger: ATCTATCCTCTCCCTAAGCAACAGAACCTTCCTAAG...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAGTTTTCACACGTCTCTaGATCTTTTCACCTGATCCT +
Preference number: 5 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVVFTRL*IFSPDP
Trigger: AGGATCAGGTGAAAAGATCAAGAGACGTGTGAAAAC...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACCCTTGTTTCACAAGATaGATGTCCCCTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINPCFTR*MSPFDF
Trigger: GAAATCAAAAGGGGACATCAATCTTGTGAAACAAGG...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAAGATTAATCACTGGCTGAAGGTAGCTCTTTGCAGAGAGGAATATAAACTTGATTCTTTTCTCCTATaGTCAATGGTGTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: TKINHWLKVALCREEYKLDSFLL*SMVCWT
Trigger: TGTCCAGCACACCATTGACAATAGGAGAAAAGAATC...AAGTTTATATTCCTCTCTGCAAAGAGCTACCTTCAGCCAGTGATTAATCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAGATTCGAGCTTGTGCTaGCTGTCGTTCATAATTAAT +
Preference number: 5 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVDSSLC*LSFIIN
Trigger: ATTAATTATGAACGACAGCAAGCACAAGCTCGAATC...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTATGTTGTTATTGGAATTaGTTCGGCCACCTTCTAATG +
Preference number: 5 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVCCYWN*FGHLLM
Trigger: CATTAGAAGGTGGCCGAACAAATTCCAATAACAACA...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAATTGCTGTTGTTGTTATaGGAATTTGTTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKLLLLL*EFVRPP
Trigger: AGGTGGCCGAACAAATTCCAATAACAACAACAGCAA...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp ACAAGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAATCCTCACCAATAAATaGATTCTGCAGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSKCVCLQCSLETPQTSVILTNK*ILQHFL
Trigger: CAAGAAATGCTGCAGAATCAATTTATTGGTGAGGAT...TACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp TGTCAGGCTGTGCTGGGAAATAACGAACCATACGTATTAAAGATTCAAATCAACTGTTCTGAACATGGATaGCTGTTGTTGTTATTGGAA +
Preference number: 5 (lower is better)
Translates to: CQAVLGNNEPYVLKIQINCSEHG*LLLLLE
Trigger: TTCCAATAACAACAACAGCAATCCATGTTCAGAACA...GTTGATTTGAATCTTTAATACGTATGGTTCGTTATTTCCCAGCACAGCCTGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAACTACTTGTTTCAAGTTaGATTTGTGCTTGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKLLVSS*ICACCQ
Trigger: TTGGCAACAAGCACAAATCAAACTTGAAACAAGTAG...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS-3UTR CAA 90 bp AGTAAATGTGTGTGTTTGCAATGCTCACTAGAAACACCACAGACATCAGTAAAATTGATTGTATTCATCTaGGCAACTCCAGTTTCTACT +
Preference number: 5 (lower is better)
Translates to: SKCVCLQCSLETPQTSVKLIVFI*ATPVST
Trigger: AGTAGAAACTGGAGTTGCCAAGATGAATACAATCAA...TTTTACTGATGTCTGTGGTGTTTCTAGTGAGCATTGCAAACACACACATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp GGACCTATGTGCCACTATGTTGGCTGCCTGGCCAGCTaGCACTGCGCCATTGGCATACTGGGTTGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: GPMCHYVGCLAS*HCAIGILGCGS
Trigger: GCTGCCACAACCCAGTATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp GGGAGGGCTCTGCTGCTGCCGCCTCCATCATGTTCATaGTGTGAAGACCCTGTTTCCGGTCTCCTGTCAACA +
Preference number: 6 (lower is better)
Translates to: GRALLLPPPSCS*CEDPVSGLLST
Trigger: TGTTGACAGGAGACCGGAAACAGGGTCTTCACAGCATGAACATGATGGAGGCGGCAGCAGCAGAGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp CAGCTTCAGGTTATCCAGGTCAAGGGAGGGCTCTGCTaGTGCCGCCTCCATCATGTTCATGCTGTGAAGACC +
Preference number: 6 (lower is better)
Translates to: QLQVIQVKGGLC*CRLHHVHAVKT
Trigger: GGTCTTCACAGCATGAACATGATGGAGGCGGCAGCAGCAGAGCCCTCCCTTGACCTGGATAACCTGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp CAGCAGCTTCAGGTTATCCAGGTCAAGGGAGGGCTCTaGTGCTGCCGCCTCCATCATGTTCATGCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: QQLQVIQVKGGL*CCRLHHVHAVK
Trigger: CTTCACAGCATGAACATGATGGAGGCGGCAGCAGCAGAGCCCTCCCTTGACCTGGATAACCTGAAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp TCTGCAGCATTTCTTGGGACCTATGTGCCACTATGTTaGCTGCCTGGCCAGCTGGCACTGCGCCATTGGCAT +
Preference number: 6 (lower is better)
Translates to: SAAFLGTYVPLC*LPGQLALRHWH
Trigger: ATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp TTCTGCAGCATTTCTTGGGACCTATGTGCCACTATGTaGGCTGCCTGGCCAGCTGGCACTGCGCCATTGGCA +
Preference number: 6 (lower is better)
Translates to: FCSISWDLCATM*AAWPAGTAPLA
Trigger: TGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp ACTATGTTGGCTGCCTGGCCAGCTGGCACTGCGCCATaGGCATACTGGGTTGTGGCAGCATGGGAATTAACA +
Preference number: 6 (lower is better)
Translates to: TMLAAWPAGTAP*AYWVVAAWELT
Trigger: TGTTAATTCCCATGCTGCCACAACCCAGTATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp CTATGTGCCACTATGTTGGCTGCCTGGCCAGCTGGCACTGCGCCATaGGCATACTGGGTTGTGGCAGCATGGGAATTAACATTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: LCATMLAAWPAGTAP*AYWVVAAWELTLWL
Trigger: AAGCCACAATGTTAATTCCCATGCTGCCACAACCCAGTATGCCAATGGCGCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp GATTTAGAATGGACTGCCCTGTCACTGCCATTGTTGTaGACCTCACAGTCCAGCGGCTCGGTGGAGATGACC +
Preference number: 6 (lower is better)
Translates to: DLEWTALSLPLL*TSQSSGSVEMT
Trigger: GGTCATCTCCACCGAGCCGCTGGACTGTGAGGTCAACAACAATGGCAGTGACAGGGCAGTCCATTCTAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp AGCAACTGGACGCTCATCCAAGGAACCTTTATATACTaGTCCGTATCGACCCCGTCCAATCAGCTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: SNWTLIQGTFIY*SVSTPSNQLQQ
Trigger: CTGCTGGAGCTGATTGGACGGGGTCGATACGGAGCAGTATATAAAGGTTCCTTGGATGAGCGTCCAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp ATACTCCATCACAAGCAAATACTCCATGCGGCCGTCTaGAGTGAGCCTCTCGTCTCCAACTATGAAGCGAGC +
Preference number: 6 (lower is better)
Translates to: ILHHKQILHAAV*SEPLVSNYEAS
Trigger: GCTCGCTTCATAGTTGGAGACGAGAGGCTCACTGCAGACGGCCGCATGGAGTATTTGCTTGTGATGGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp GGTTGTGTTTGTGGACAGGCTTGTGACGCTTGTTTCTaGGCTAGGGATTCGAGCTTGTGCTTGCTGTCGTTC +
Preference number: 6 (lower is better)
Translates to: GCVCGQACDACF*ARDSSLCLLSF
Trigger: GAACGACAGCAAGCACAAGCTCGAATCCCTAGCCCAGAAACAAGCGTCACAAGCCTGTCCACAAACACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp AGCAGACAGGGGTTGGCCCGATTGACTGTGCAACATTaGTGGCGTGCAAATGTGTCTCATCTGGGTATGGCA +
Preference number: 6 (lower is better)
Translates to: SRQGLARLTVQH*WRANVSHLGMA
Trigger: TGCCATACCCAGATGAGACACATTTGCACGCCACAAATGTTGCACAGTCAATCGGGCCAACCCCTGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp CTAGATTTAGAATGGACTGCCCTGTCACTGCCATTGTaGTTGACCTCACAGTCCAGCGGCTCGGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: LDLEWTALSLPL*LTSQSSGSVEM
Trigger: CATCTCCACCGAGCCGCTGGACTGTGAGGTCAACAACAATGGCAGTGACAGGGCAGTCCATTCTAAATCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp CCAAGTCTTCTTCTGTCAGCTGTAAGCAGACAGGGGTTGGCCCGATaGACTGTGCAACATTTGTGGCGTGCAAATGTGTCTCATCTGGGT +
Preference number: 6 (lower is better)
Translates to: PSLLLSAVSRQGLAR*TVQHLWRANVSHLG
Trigger: ACCCAGATGAGACACATTTGCACGCCACAAATGTTGCACAGTCAATCGGGCCAACCCCTGTCTGCTTACAGCTGACAGAAGAAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp ATACTGCTGCCATCCAGGATATTTGTGGCTGAAAGATCCAGAGAATaGGGCCTCTGTGCTCTTCTGGGCTTTGATGGCCCAGGATCTGCA +
Preference number: 6 (lower is better)
Translates to: ILLPSRIFVAERSRE*GLCALLGFDGPGSA
Trigger: TGCAGATCCTGGGCCATCAAAGCCCAGAAGAGCACAGAGGCCCAATTCTCTGGATCTTTCAGCCACAAATATCCTGGATGGCAGCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp GGCACACGCCTATTATGTGACAGGTTGCGTTCATTCTaGATAGCAGTTGACATTGGGTTGACCGTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: GTRLLCDRLRSF*IAVDIGLTVGL
Trigger: GAGCCCAACGGTCAACCCAATGTCAACTGCTATGCAGAATGAACGCAACCTGTCACATAATAGGCGTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp GGGGTTGGCCCGATTGACTGTGCAACATTTGTGGCGTaGAAATGTGTCTCATCTGGGTATGGCATCTCAGAT +
Preference number: 6 (lower is better)
Translates to: GVGPIDCATFVA*KCVSSGYGISD
Trigger: ATCTGAGATGCCATACCCAGATGAGACACATTTGCACGCCACAAATGTTGCACAGTCAATCGGGCCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp CTGCCAGGCTATTTTCTTTCCAGGCTTCTGGGAACTTaGGTCTCTGCTTCTCTCTGGACACAAGAACCTGCA +
Preference number: 6 (lower is better)
Translates to: LPGYFLSRLLGT*VSASLWTQEPA
Trigger: TGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp AGACAGGGGTTGGCCCGATTGACTGTGCAACATTTGTaGCGTGCAAATGTGTCTCATCTGGGTATGGCATCT +
Preference number: 6 (lower is better)
Translates to: RQGLARLTVQHL*RANVSHLGMAS
Trigger: AGATGCCATACCCAGATGAGACACATTTGCACGCCACAAATGTTGCACAGTCAATCGGGCCAACCCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp ACTGCCAGGCTATTTTCTTTCCAGGCTTCTGGGAACTaGGGTCTCTGCTTCTCTCTGGACACAAGAACCTGC +
Preference number: 6 (lower is better)
Translates to: TARLFSFQASGN*GLCFSLDTRTC
Trigger: GCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp ACATGCTTGCCCATTTGCAGCCTGTGTGAAGTCCTGTaGTCCAGTCACTTCCACTGCGAGCTTTATGAGTGG +
Preference number: 6 (lower is better)
Translates to: TCLPICSLCEVL*SSHFHCELYEW
Trigger: CCACTCATAAAGCTCGCAGTGGAAGTGACTGGACAACAGGACTTCACACAGGCTGCAAATGGGCAAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp AGTGACCTCACTGCCAGGCTATTTTCTTTCCAGGCTTCTGGGAACTaGGGTCTCTGCTTCTCTCTGGACACAAGAACCTGCATATCCTCA +
Preference number: 6 (lower is better)
Translates to: SDLTARLFSFQASGN*GLCFSLDTRTCISS
Trigger: TGAGGATATGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGCAGTGAGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp TCAGCTGTAAGCAGACAGGGGTTGGCCCGATTGACTGTGCAACATTaGTGGCGTGCAAATGTGTCTCATCTGGGTATGGCATCTCAGATA +
Preference number: 6 (lower is better)
Translates to: SAVSRQGLARLTVQH*WRANVSHLGMASQI
Trigger: TATCTGAGATGCCATACCCAGATGAGACACATTTGCACGCCACAAATGTTGCACAGTCAATCGGGCCAACCCCTGTCTGCTTACAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp ATTCAGCCTGGTATCCTCACCAATAAATTGATTCTGCAGCATTTCTaGGGACCTATGTGCCACTATGTTGGCTGCCTGGCCAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: IQPGILTNKLILQHF*GPMCHYVGCLASWH
Trigger: GTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAATCAATTTATTGGTGAGGATACCAGGCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp CAGGAATTAAACATGCTTGCCCATTTGCAGCCTGTGTaGAGTCCTGTTGTCCAGTCACTTCCACTGCGAGCT +
Preference number: 6 (lower is better)
Translates to: QELNMLAHLQPV*SPVVQSLPLRA
Trigger: AGCTCGCAGTGGAAGTGACTGGACAACAGGACTTCACACAGGCTGCAAATGGGCAAGCATGTTTAATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp GAACTGGTACTGCTCAATGGGTCTGGCCCACTGAACTaGTTCAGAGAATGCTCCATGAGATTCTCATCAGAG +
Preference number: 6 (lower is better)
Translates to: ELVLLNGSGPLN*FRECSMRFSSE
Trigger: CTCTGATGAGAATCTCATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp AATAAATTGATTCTGCAGCATTTCTTGGGACCTATGTaGCACTATGTTGGCTGCCTGGCCAGCTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: NKLILQHFLGPM*HYVGCLASWHC
Trigger: GCAGTGCCAGCTGGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAATCAATTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp GTATGGCATCTCAGATATAGTGGTCATGCCAGTACTTaGAGTGAGGCCGGTGGTGTTTGTGGTGGTTGTGTT +
Preference number: 6 (lower is better)
Translates to: VWHLRYSGHAST*SEAGGVCGGCV
Trigger: AACACAACCACCACAAACACCACCGGCCTCACTCCAAGTACTGGCATGACCACTATATCTGAGATGCCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp GAGTGGATAAAGCAAGCTAGAACTGGTACTGCTCAATaGGTCTGGCCCACTGAACTGCTTCAGAGAATGCTC +
Preference number: 6 (lower is better)
Translates to: EWIKQARTGTAQ*VWPTELLQRML
Trigger: GAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGTTCTAGCTTGCTTTATCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp CTCCTATCTACCAAACGATCCAGAACCCCTTCATCATaGCCAGCCTGTTGCTCTCGTCTCAGTAAAGGTTCA +
Preference number: 6 (lower is better)
Translates to: LLSTKRSRTPSS*PACCSRLSKGS
Trigger: TGAACCTTTACTGAGACGAGAGCAACAGGCTGGCCATGATGAAGGGGTTCTGGATCGTTTGGTAGATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp ACTGCGCCATTGGCATACTGGGTTGTGGCAGCATGGGAATTAACATaGTGGCTTCTACCTGCCACACCATTCATAGTTACTGTCACCACA +
Preference number: 6 (lower is better)
Translates to: TAPLAYWVVAAWELT*WLLPATPFIVTVTT
Trigger: TGTGGTGACAGTAACTATGAATGGTGTGGCAGGTAGAAGCCACAATGTTAATTCCCATGCTGCCACAACCCAGTATGCCAATGGCGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp TGGCCAGCCTGTTGCTCTCGTCTCAGTAAAGGTTCATaGTCATCAGGACTGGAATTGATATTCAGCCTGGTA +
Preference number: 6 (lower is better)
Translates to: WPACCSRLSKGS*SSGLELIFSLV
Trigger: TACCAGGCTGAATATCAATTCCAGTCCTGATGAGCATGAACCTTTACTGAGACGAGAGCAACAGGCTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp ATAAAGCAAGCTAGAACTGGTACTGCTCAATGGGTCTaGCCCACTGAACTGCTTCAGAGAATGCTCCATGAG +
Preference number: 6 (lower is better)
Translates to: IKQARTGTAQWV*PTELLQRMLHE
Trigger: CTCATGGAGCATTCTCTGAAGCAGTTCAGTGGGCCAGACCCATTGAGCAGTACCAGTTCTAGCTTGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp CACCTATCTGTATACTGCTGCCATCCAGGATATTTGTaGCTGAAAGATCCAGAGAATTGGGCCTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: HLSVYCCHPGYL*LKDPENWASVL
Trigger: GAGCACAGAGGCCCAATTCTCTGGATCTTTCAGCCACAAATATCCTGGATGGCAGCAGTATACAGATAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp GCAGTTGACATTGGGTTGACCGTTGGGCTCACAGACTaGTTTCTCTCCCATATCATCATGAGTTCAGCCATC +
Preference number: 6 (lower is better)
Translates to: AVDIGLTVGLTD*FLSHIIMSSAI
Trigger: GATGGCTGAACTCATGATGATATGGGAGAGAAACAAGTCTGTGAGCCCAACGGTCAACCCAATGTCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp AGGTTGCGTTCATTCTGCATAGCAGTTGACATTGGGTaGACCGTTGGGCTCACAGACTTGTTTCTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: RLRSFCIAVDIG*TVGLTDLFLSH
Trigger: ATGGGAGAGAAACAAGTCTGTGAGCCCAACGGTCAACCCAATGTCAACTGCTATGCAGAATGAACGCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp GGTATCCTCACCAATAAATTGATTCTGCAGCATTTCTaGGGACCTATGTGCCACTATGTTGGCTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GILTNKLILQHF*GPMCHYVGCLA
Trigger: GGCCAGGCAGCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAATCAATTTATTGGTGAGGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp TTCTGCATAGCAGTTGACATTGGGTTGACCGTTGGGCTCACAGACTaGTTTCTCTCCCATATCATCATGAGTTCAGCCATCCTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: FCIAVDIGLTVGLTD*FLSHIIMSSAILSS
Trigger: TGAGGAGAGGATGGCTGAACTCATGATGATATGGGAGAGAAACAAGTCTGTGAGCCCAACGGTCAACCCAATGTCAACTGCTATGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp CTTGTGTTGACTCACCTATCTGTATACTGCTGCCATCCAGGATATTaGTGGCTGAAAGATCCAGAGAATTGGGCCTCTGTGCTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LVLTHLSVYCCHPGY*WLKDPENWASVLFW
Trigger: CCAGAAGAGCACAGAGGCCCAATTCTCTGGATCTTTCAGCCACAAATATCCTGGATGGCAGCAGTATACAGATAGGTGAGTCAACACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp GACGGGCGCCACCGCTTAAGAGAGTATGGAGTTTTCACACGTCTCTaGATCTTTTCACCTGATCCTGATTTGCCATCTTGTGTTGACTCA +
Preference number: 6 (lower is better)
Translates to: DGRHRLREYGVFTRL*IFSPDPDLPSCVDS
Trigger: TGAGTCAACACAAGATGGCAAATCAGGATCAGGTGAAAAGATCAAGAGACGTGTGAAAACTCCATACTCTCTTAAGCGGTGGCGCCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp TCTGTACTACAGCAGCAAAAGCGGTACGTTCCATTCTaGATTGAGGGTGGGGTGGTAGTTACTACACACTCT +
Preference number: 6 (lower is better)
Translates to: SVLQQQKRYVPF*IEGGVVVTTHS
Trigger: AGAGTGTGTAGTAACTACCACCCCACCCTCAATTCAGAATGGAACGTACCGCTTTTGCTGCTGTAGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp CTATTTTCTTTCCAGGCTTCTGGGAACTTGGGTCTCTaGTTCTCTCTGGACACAAGAACCTGCATATCCTCA +
Preference number: 6 (lower is better)
Translates to: LFSFQASGNLGL*FSLDTRTCISS
Trigger: TGAGGATATGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp AGCCTGTGTGAAGTCCTGTTGTCCAGTCACTTCCACTaGGAGCTTTATGAGTGGATAAAGCAAGCTAGAACT +
Preference number: 6 (lower is better)
Translates to: SLCEVLLSSHFH*ELYEWIKQART
Trigger: AGTTCTAGCTTGCTTTATCCACTCATAAAGCTCGCAGTGGAAGTGACTGGACAACAGGACTTCACACAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp TGTGGCAGCATGGGAATTAACATTGTGGCTTCTACCTaGCACACCATTCATAGTTACTGTCACCACATGAGG +
Preference number: 6 (lower is better)
Translates to: CGSMGINIVAST*HTIHSYCHHMR
Trigger: CCTCATGTGGTGACAGTAACTATGAATGGTGTGGCAGGTAGAAGCCACAATGTTAATTCCCATGCTGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp CTGTTGTCCAGTCACTTCCACTGCGAGCTTTATGAGTaGATAAAGCAAGCTAGAACTGGTACTGCTCAATGG +
Preference number: 6 (lower is better)
Translates to: LLSSHFHCELYE*IKQARTGTAQW
Trigger: CCATTGAGCAGTACCAGTTCTAGCTTGCTTTATCCACTCATAAAGCTCGCAGTGGAAGTGACTGGACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp GCATACTGGGTTGTGGCAGCATGGGAATTAACATTGTaGCTTCTACCTGCCACACCATTCATAGTTACTGTC +
Preference number: 6 (lower is better)
Translates to: AYWVVAAWELTL*LLPATPFIVTV
Trigger: GACAGTAACTATGAATGGTGTGGCAGGTAGAAGCCACAATGTTAATTCCCATGCTGCCACAACCCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp GGTGGTAGTTACTACACACTCTTCATAGTGGCACTCTaGGGGATCACCGATGTGAGACCAACATCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: GGSYYTLFIVAL*GITDVRPTSLF
Trigger: AAACAAGGATGTTGGTCTCACATCGGTGATCCCCAAGAGTGCCACTATGAAGAGTGTGTAGTAACTACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp CAGAATGAGCCAGACGGCAAGAGCTTACCCAATCACTaGTGTGGAGACTCAGATATTTGCACAGAGATCCAT +
Preference number: 6 (lower is better)
Translates to: QNEPDGKSLPNH*CGDSDICTEIH
Trigger: ATGGATCTCTGTGCAAATATCTGAGTCTCCACACAAGTGATTGGGTAAGCTCTTGCCGTCTGGCTCATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp CAAAGGCAAACTAGTAGGTCTCTTAGGAAGGTTCTGTaGCTTAGGGAGAGGATAGATCTGAGCAGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: QRQTSRSLRKVL*LRERIDLSRWN
Trigger: GTTCCACCTGCTCAGATCTATCCTCTCCCTAAGCAACAGAACCTTCCTAAGAGACCTACTAGTTTGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp ACTCACCTATCTGTATACTGCTGCCATCCAGGATATTaGTGGCTGAAAGATCCAGAGAATTGGGCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: THLSVYCCHPGY*WLKDPENWASV
Trigger: CACAGAGGCCCAATTCTCTGGATCTTTCAGCCACAAATATCCTGGATGGCAGCAGTATACAGATAGGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp TTATGTGACAGGTTGCGTTCATTCTGCATAGCAGTTGACATTGGGTaGACCGTTGGGCTCACAGACTTGTTTCTCTCCCATATCATCATG +
Preference number: 6 (lower is better)
Translates to: LCDRLRSFCIAVDIG*TVGLTDLFLSHIIM
Trigger: CATGATGATATGGGAGAGAAACAAGTCTGTGAGCCCAACGGTCAACCCAATGTCAACTGCTATGCAGAATGAACGCAACCTGTCACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp CTACCTGCCACACCATTCATAGTTACTGTCACCACATaGGGCTCTGCTGCATTGATTGTATTCATCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LPATPFIVTVTT*GSAALIVFILA
Trigger: TGCCAAGATGAATACAATCAATGCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGTGTGGCAGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp TATCTGTATACTGCTGCCATCCAGGATATTTGTGGCTaGAAGATCCAGAGAATTGGGCCTCTGTGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: YLYTAAIQDICG*KIQRIGPLCSS
Trigger: AGAAGAGCACAGAGGCCCAATTCTCTGGATCTTTCAGCCACAAATATCCTGGATGGCAGCAGTATACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp AACTTGGGTCTCTGCTTCTCTCTGGACACAAGAACCTaGATATCCTCAAATGTGGGATGGTTTCCAACTTCT +
Preference number: 6 (lower is better)
Translates to: NLGLCFSLDTRT*ISSNVGWFPTS
Trigger: AGAAGTTGGAAACCATCCCACATTTGAGGATATGCAGGTTCTTGTGTCCAGAGAGAAGCAGAGACCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp TGCCATCTTGTGTTGACTCACCTATCTGTATACTGCTaGCATCCAGGATATTTGTGGCTGAAAGATCCAGAG +
Preference number: 6 (lower is better)
Translates to: CHLVLTHLSVYC*HPGYLWLKDPE
Trigger: CTCTGGATCTTTCAGCCACAAATATCCTGGATGGCAGCAGTATACAGATAGGTGAGTCAACACAAGATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CCA 72 bp AACATTTGTGGCGTGCAAATGTGTCTCATCTGGGTATaGCATCTCAGATATAGTGGTCATGCCAGTACTTGG +
Preference number: 6 (lower is better)
Translates to: NICGVQMCLIWV*HLRYSGHASTW
Trigger: CCAAGTACTGGCATGACCACTATATCTGAGATGCCATACCCAGATGAGACACATTTGCACGCCACAAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp ATGAGGAAGAGGAATAATCTGGGTAAGGCCCGATTTTaGGCACACGCCTATTATGTGACAGGTTGCGTTCAT +
Preference number: 6 (lower is better)
Translates to: MRKRNNLGKARF*AHAYYVTGCVH
Trigger: ATGAACGCAACCTGTCACATAATAGGCGTGTGCCAAAAATCGGGCCTTACCCAGATTATTCCTCTTCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp GGACTGAGTGGTGTTGTGTCAGGGGGTGGAAAGTTCTCAGTAAAGTaGACATTACATAAATCTGTACTACAGCAGCAAAAGCGGTACGTT +
Preference number: 6 (lower is better)
Translates to: GLSGVVSGGGKFSVK*TLHKSVLQQQKRYV
Trigger: AACGTACCGCTTTTGCTGCTGTAGTACAGATTTATGTAATGTCAACTTTACTGAGAACTTTCCACCCCCTGACACAACACCACTCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp TTTGGTGTTCAAAGGCAAACTAGTAGGTCTCTTAGGAAGGTTCTGTaGCTTAGGGAGAGGATAGATCTGAGCAGGTGGAACATCAGGAAT +
Preference number: 6 (lower is better)
Translates to: FGVQRQTSRSLRKVL*LRERIDLSRWNIRN
Trigger: ATTCCTGATGTTCCACCTGCTCAGATCTATCCTCTCCCTAAGCAACAGAACCTTCCTAAGAGACCTACTAGTTTGCCTTTGAACACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp TGCCAAAGCAATGATTATCGTTTCATCTCGATTAAATaGATGAGGTGGACTGAGTGGTGTTGTGTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CQSNDYRFISIK*MRWTEWCCVRG
Trigger: CCCCCTGACACAACACCACTCAGTCCACCTCATTCATTTAATCGAGATGAAACGATAATCATTGCTTTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp CACACCATTCATAGTTACTGTCACCACATGAGGCTCTaGTGCATTGATTGTATTCATCTTGGCAACTCCAGT +
Preference number: 6 (lower is better)
Translates to: HTIHSYCHHMRL*CIDCIHLGNSS
Trigger: ACTGGAGTTGCCAAGATGAATACAATCAATGCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp GTTCTGAACATGGATTGCTGTTGTTGTTATTGGAATTaGTTCGGCCACCTTCTAATGGCCGTTCCCTCCTAT +
Preference number: 6 (lower is better)
Translates to: VLNMDCCCCYWN*FGHLLMAVPSY
Trigger: ATAGGAGGGAACGGCCATTAGAAGGTGGCCGAACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp ATCAGGACTGGAATTGATATTCAGCCTGGTATCCTCACCAATAAATaGATTCTGCAGCATTTCTTGGGACCTATGTGCCACTATGTTGGC +
Preference number: 6 (lower is better)
Translates to: IRTGIDIQPGILTNK*ILQHFLGPMCHYVG
Trigger: GCCAACATAGTGGCACATAGGTCCCAAGAAATGCTGCAGAATCAATTTATTGGTGAGGATACCAGGCTGAATATCAATTCCAGTCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp GGATATCTTGTTCTGAACATGGATTGCTGTTGTTGTTATTGGAATTaGTTCGGCCACCTTCTAATGGCCGTTCCCTCCTATCTACCAAAC +
Preference number: 6 (lower is better)
Translates to: GYLVLNMDCCCCYWN*FGHLLMAVPSYLPN
Trigger: GTTTGGTAGATAGGAGGGAACGGCCATTAGAAGGTGGCCGAACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAACAAGATATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp ACCTATCCCAAGATCTTGTTGATATGGATCTTTAAATaGACACAGCCGTTCTTGATTCTGAGAAGCAGCCGT +
Preference number: 6 (lower is better)
Translates to: TYPKILLIWIFK*TQPFLILRSSR
Trigger: ACGGCTGCTTCTCAGAATCAAGAACGGCTGTGTGCATTTAAAGATCCATATCAACAAGATCTTGGGATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp ACCATTCATAGTTACTGTCACCACATGAGGCTCTGCTaGATTGATTGTATTCATCTTGGCAACTCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: TIHSYCHHMRLC*IDCIHLGNSSF
Trigger: GAAACTGGAGTTGCCAAGATGAATACAATCAATGCAGCAGAGCCTCATGTGGTGACAGTAACTATGAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp GGAATTGATATTCAGCCTGGTATCCTCACCAATAAATaGATTCTGCAGCATTTCTTGGGACCTATGTGCCAC +
Preference number: 6 (lower is better)
Translates to: GIDIQPGILTNK*ILQHFLGPMCH
Trigger: GTGGCACATAGGTCCCAAGAAATGCTGCAGAATCAATTTATTGGTGAGGATACCAGGCTGAATATCAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp ATTTCTCCCACAGACCATAACACGTGCTCCCTTTGGAACATAATATaGTCCCATTTTCATGAGAGATTCGACTCTCACCTATCCCAAGAT +
Preference number: 6 (lower is better)
Translates to: ISPTDHNTCSLWNII*SHFHERFDSHLSQD
Trigger: ATCTTGGGATAGGTGAGAGTCGAATCTCTCATGAAAATGGGACAATATTATGTTCCAAAGGGAGCACGTGTTATGGTCTGTGGGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp GTAACACCTTGTGTAAGGATATCTTGTTCTGAACATGGATTGCTGTaGTTGTTATTGGAATTTGTTCGGCCACCTTCTAATGGCCGTTCC +
Preference number: 6 (lower is better)
Translates to: VTPCVRISCSEHGLL*LLLEFVRPPSNGRS
Trigger: GGAACGGCCATTAGAAGGTGGCCGAACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAACAAGATATCCTTACACAAGGTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp GTGCTCCCTTTGGAACATAATATTGTCCCATTTTCATaGGAGATTCGACTCTCACCTATCCCAAGATCTTGT +
Preference number: 6 (lower is better)
Translates to: VLPLEHNIVPFS*EIRLSPIPRSC
Trigger: ACAAGATCTTGGGATAGGTGAGAGTCGAATCTCTCATGAAAATGGGACAATATTATGTTCCAAAGGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 90 bp GTGCTTGTAACACCTTGTGTAAGGATATCTTGTTCTGAACATGGATaGCTGTTGTTGTTATTGGAATTTGTTCGGCCACCTTCTAATGGC +
Preference number: 6 (lower is better)
Translates to: VLVTPCVRISCSEHG*LLLLLEFVRPPSNG
Trigger: GCCATTAGAAGGTGGCCGAACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAACAAGATATCCTTACACAAGGTGTTACAAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp ACACCTTGTGTAAGGATATCTTGTTCTGAACATGGATaGCTGTTGTTGTTATTGGAATTTGTTCGGCCACCT +
Preference number: 6 (lower is better)
Translates to: TPCVRISCSEHG*LLLLLEFVRPP
Trigger: AGGTGGCCGAACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAACAAGATATCCTTACACAAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp TTGGCAACTCCAGTTTCTACTTGTTTCAAGTTTGATTaGTGCTTGTTGCCAAATTTTAGCCGGGGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: LATPVSTCFKFD*CLLPNFSRGSF
Trigger: AAAAGAACCCCGGCTAAAATTTGGCAACAAGCACAAATCAAACTTGAAACAAGTAGAAACTGGAGTTGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS GCA 72 bp TTGAATTTCGATTCTTTTCTCCTATTGTCAATGGTGTaGTGGACATCGAATGCTCAGAGGAAATATTCTTCA +
Preference number: 6 (lower is better)
Translates to: LNFDSFLLLSMV*WTSNAQRKYSS
Trigger: TGAAGAATATTTCCTCTGAGCATTCGATGTCCAGCACACCATTGACAATAGGAGAAAAGAATCGAAATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS CAA 72 bp TGTGTAAGGATATCTTGTTCTGAACATGGATTGCTGTaGTTGTTATTGGAATTTGTTCGGCCACCTTCTAAT +
Preference number: 6 (lower is better)
Translates to: CVRISCSEHGLL*LLLEFVRPPSN
Trigger: ATTAGAAGGTGGCCGAACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAACAAGATATCCTTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7
CDS TCA 72 bp TGTGCTTGTAACACCTTGTGTAAGGATATCTTGTTCTaGACATGGATTGCTGTTGTTGTTATTGGAATTTGT +
Preference number: 6 (lower is better)
Translates to: CACNTLCKDILF*TWIAVVVIGIC
Trigger: ACAAATTCCAATAACAACAACAGCAATCCATGTTCAGAACAAGATATCCTTACACAAGGTGTTACAAGCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087435.7