Pregenerated sensors for BMPR1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021796Ensembl transcript IDs: ENSMUST00000049005.15
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGGTTGGGCATCTACATGAAGGAAAAGCATGCGTCACTTACCTaGCCATGCTCCAGGACTTTCCAGAAGCCGAAATGCAAGCGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GGLGIYMKEKHASLT*PCSRTFQKPKCKRS Trigger: GCTGCGCTTGCATTTCGGCTTCTGGAAAGTCCTGGAGCATGGCCAGGTAAGTGACGCATGCTTTTCCTTCATGTAGATGCCCAACCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 90 bp | GCGTCACTTACCTGGCCATGCTCCAGGACTTTCCAGAAGCCGAAATaGAAGCGCAGCAGCGTAGGGATGCACACTTACATTACGTACAAA | + |
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Preference number: 1 (lower is better) Translates to: ASLTWPCSRTFQKPK*KRSSVGMHTYITYK Trigger: TTTGTACGTAATGTAAGTGTGCATCCCTACGCTGCTGCGCTTGCATTTCGGCTTCTGGAAAGTCCTGGAGCATGGCCAGGTAAGTGACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 90 bp | ATCCCCTCATTAAGGTGGGTTGGGCATCTACATGAAGGAAAAGCATaGGTCACTTACCTGGCCATGCTCCAGGACTTTCCAGAAGCCGAA | + |
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Preference number: 1 (lower is better) Translates to: IPSLRWVGHLHEGKA*VTYLAMLQDFPEAE Trigger: TTCGGCTTCTGGAAAGTCCTGGAGCATGGCCAGGTAAGTGACGCATGCTTTTCCTTCATGTAGATGCCCAACCCACCTTAATGAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 90 bp | AACTTGTGTCATTACCACAAGGGCTACACCACCTTTCTTTTCACATaGCTTACACCTCTGTTGAAATGGAAACATTTCAAAACAATACAT | + |
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Preference number: 1 (lower is better) Translates to: NLCHYHKGYTTFLFT*LTPLLKWKHFKTIH Trigger: ATGTATTGTTTTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTGTAGCCCTTGTGGTAATGACACAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCGCAAGCCATGGAGTGTGTGGAAGTCAGAGGACAATGATGGGGTAGTTGGCACTGTTAGCAGCCTGTaGAGATGTAGAGGAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GRKPWSVWKSEDNDGVVGTVSSL*RCRGRS Trigger: ACTCCTTCCTCTACATCTTCACAGGCTGCTAACAGT...GCCAACTACCCCATCATTGTCCTCTGACTTCCACACACTCCATGGCTTGCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCAAGCCATGGAGTGTGTGGAAGTCAGAGGACAATGATGGGGTAGTTGGCGGCAGCAGAGAATTCTaGTATGCATATCAAAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: GRKPWSVWKSEDNDGVVGGSREF*YAYQRY Trigger: ATACCTTTGATATGCATACCAGAATTCTCTGCTGCC...GCCAACTACCCCATCATTGTCCTCTGACTTCCACACACTCCATGGCTTGCGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR TCA 90 bp | AGTTTAGTCATGCCTGTAGGTGGACAGATGGACATATGCTCTACCTGCCTCCCAAGAGCCAATGCCACTTaGTGCTCACATGGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SLVMPVGGQMDICSTCLPRANAT*CSHGLF Trigger: AAACAAGCCATGTGAGCATCAAGTGGCATTGGCTCT...TGGGAGGCAGGTAGAGCATATGTCCATCTGTCCACCTACAGGCATGACTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAGTCATGCCTGTAGGTGGACAGATGGACATATGCTCTACCTGCCTCCCAATCCCACCCATTCCTTaGGTGAAGAAGTTCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SLVMPVGGQMDICSTCLPIPPIP*VKKFLQ Trigger: CTGCAAGAACTTCTTCACCCAAGGAATGGGTGGGAT...TGGGAGGCAGGTAGAGCATATGTCCATCTGTCCACCTACAGGCATGACTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGACCAAGGATCAGATGTaGGACAGAGTGTATGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LRLRTWQQMPLSTELSHWTKDQM*DRVYGL Trigger: CAGCCCATACACTCTGTCTCACATCTGATCCTTGGT...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | GGGCGCAAGCCATGGAGTGTGTGGAAGTCAGAGGACAATGATGGGGTAGTTGGCTTGTCAACTAGATATTaGATATTTAAACCACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GRKPWSVWKSEDNDGVVGLSTRY*IFKPLA Trigger: GGCCAGTGGTTTAAATATGCAATATCTAGTTGACAA...GCCAACTACCCCATCATTGTCCTCTGACTTCCACACACTCCATGGCTTGCGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGACTGATTCCCATGAATaGAGTGATGGCAGCGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LRLRTWQQMPLSTELSHWTDSHE*SDGSVG Trigger: TCCCACGCTGCCATCACTGCATTCATGGGAATCAGT...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | GCAAAAGGTGTCTTTATGTGCTTATTCAAGTTTCTAGACAGTGGAAGGGTTAACCATGGTGTGTGTCTGTaGGGAGGGGCGCAAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: AKGVFMCLFKFLDSGRVNHGVCL*GGAQAM Trigger: CATGGCTTGCGCCCCTCCCCACAGACACACACCATG...GTTAACCCTTCCACTGTCTAGAAACTTGAATAAGCACATAAAGACACCTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAGTCATGCCTGTAGGTGGACAGATGGACATATGCTCTACCTGCCTCCCAGTGACTGGGTACTTCTaGCTCTTGTCTTCACAATTA | + |
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Preference number: 2 (lower is better) Translates to: SLVMPVGGQMDICSTCLPVTGYF*LLSSQL Trigger: TAATTGTGAAGACAAGAGGCAGAAGTACCCAGTCAC...TGGGAGGCAGGTAGAGCATATGTCCATCTGTCCACCTACAGGCATGACTAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTCCCCCAGAGTCTGAATTGAGGTTGAGGACTTGGCAGCAAATGCCTTTAAGTCATTACAGTGGCTaGCACACACAACTGAAACAT | + |
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Preference number: 2 (lower is better) Translates to: MCPPESELRLRTWQQMPLSHYSG*HTQLKH Trigger: ATGTTTCAGTTGTGTGTGGCAGCCACTGTAATGACT...TAAAGGCATTTGCTGCCAAGTCCTCAACCTCAATTCAGACTCTGGGGGACACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCCAAAGGTAGAGGAAGGAGTCTaGAAACCAAGTCAACATCCT | + |
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Preference number: 2 (lower is better) Translates to: LRTWQQMPLSTELSHWPKVEEGV*KPSQHP Trigger: AGGATGTTGACTTGGTTTCCAGACTCCTTCCTCTAC...CTTTGGCCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCCAAAGAATATGGGTAGTGACTaGGTACTTCTGCCTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LRTWQQMPLSTELSHWPKNMGSD*VLLPLV Trigger: GACAAGAGGCAGAAGTACCCAGTCACTACCCATATT...CTTTGGCCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGTTTTACATTTATGGCTaGGAGGGAGAAGAGAACACA | + |
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Preference number: 2 (lower is better) Translates to: LRLRTWQQMPLSTELSHWFYIYG*EGEENT Trigger: TGTGTTCTCTTCTCCCTCTCAGCCATAAATGTAAAA...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR TCA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAAGTGTCCCCCAGAGTCTaGATTGAGGTTGAGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: HHLSFHMTYTSVEMETFQVSPRV*IEVEDL Trigger: CAAGTCCTCAACCTCAATTCAGACTCTGGGGGACAC...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | TTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCCAAAGGACATATGCTCTACCTaGCTCCCATTTAATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LRTWQQMPLSTELSHWPKDICST*LPFNFS Trigger: ACTGAAATTAAATGGGAGGCAGGTAGAGCATATGTC...CTTTGGCCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | TGGACATATGCTCTACCTGCCTCCCATTTAATTTCAGTCACTCTATGTGTTGATATATCAAAGGTATGGTaGACCATCATAAACCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: WTYALPASHLISVTLCVDISKVW*TIINQA Trigger: TGCCTGGTTTATGATGGTGCACCATACCTTTGATAT...ATCAACACATAGAGTGACTGAAATTAAATGGGAGGCAGGTAGAGCATATGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAAAAGCCATGGAGTGTGTaGAAGTCAGAGGACAATGAT | + |
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Preference number: 2 (lower is better) Translates to: HHLSFHMTYTSVEMETFQKPWSV*KSEDND Trigger: ATCATTGTCCTCTGACTTCCACACACTCCATGGCTT...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | GCAAAAGGTGTCTTTATGTGCTTATTCAAGTTTCTAGACAGTGGAAGGGTTAACGCATATTTAAACCACTaGCCACAAATACCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AKGVFMCLFKFLDSGRVNAYLNH*PQIPSC Trigger: ACAGGAAGGTATTTGTGGCCAGTGGTTTAAATATGC...GTTAACCCTTCCACTGTCTAGAAACTTGAATAAGCACATAAAGACACCTTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | TGGACATATGCTCTACCTGCCTCCCATTTAATTTCAGTCACTCTATGTGTTGATACTTTACATGGAGTTTaGCCTTCACAACTATTATGC | + |
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Preference number: 2 (lower is better) Translates to: WTYALPASHLISVTLCVDTLHGV*PSQLLC Trigger: GCATAATAGTTGTGAAGGCCAAACTCCATGTAAAGT...ATCAACACATAGAGTGACTGAAATTAAATGGGAGGCAGGTAGAGCATATGTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAATATGGACACTTTACATaGAGTTTGGCCTTCACAACT | + |
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Preference number: 2 (lower is better) Translates to: HHLSFHMTYTSVEMETFQYGHFT*SLAFTT Trigger: AGTTGTGAAGGCCAAACTCCATGTAAAGTGTCCATA...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR GCA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAAACAAATACCTTCCTGTaGAACCTTTACATTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: HHLSFHMTYTSVEMETFQTNTFL*NLYILV Trigger: GACAAGAATGTAAAGGTTGCACAGGAAGGTATTTGT...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCCATTTAATTTCAGTCACTCTATGTGTTGATACAATCACCTTAAGTTTAGTTTCTTTCAAAGTATaGTTCAAGACAGAGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ASHLISVTLCVDTITLSLVSFKV*FKTESS Trigger: GGAGCTCTCTGTCTTGAACCATACTTTGAAAGAAAC...TAAACTTAAGGTGATTGTATCAACACATAGAGTGACTGAAATTAAATGGGAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CCA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAATTAGGAAATCTGCCCTaGAATAGACTACTCAATATC | + |
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Preference number: 2 (lower is better) Translates to: HHLSFHMTYTSVEMETFQLGNLP*NRLLNI Trigger: GATATTGAGTAGTCTATTCCAGGGCAGATTTCCTAA...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | GTTGGCTCCTCCCTTCGCCATGTGTCCCCCAGAGTCTaGATTGAGGTTGAGGACTTGGCAGCAAATGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: VGSSLRHVSPRV*IEVEDLAANAF Trigger: AAAGGCATTTGCTGCCAAGTCCTCAACCTCAATTCAGACTCTGGGGGACACATGGCGAAGGGAGGAGCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | GGGATGACCCTTCCTGTCCTCTGTGGACTGATACACTaGTTGCCTAGTTTCCACTCCTTACAGCCAGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: GMTLPVLCGLIH*LPSFHSLQPGG Trigger: ACCTCCTGGCTGTAAGGAGTGGAAACTAGGCAAGCAGTGTATCAGTCCACAGAGGACAGGAAGGGTCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | ACCTGGCCATGCTCCAGGACTTTCCAGAAGCCGAAATaGAAGCGCAGCAGCGTAGGGATGCACACTTACATT | + |
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Preference number: 3 (lower is better) Translates to: TWPCSRTFQKPK*KRSSVGMHTYI Trigger: AATGTAAGTGTGCATCCCTACGCTGCTGCGCTTGCATTTCGGCTTCTGGAAAGTCCTGGAGCATGGCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | AGCCAGGAGGTGGGAGAACTGTCCCTGCTTAACATCTaGCGCAAGTCAACTTGTGTCATTACCACAAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SQEVGELSLLNI*RKSTCVITTRA Trigger: AGCCCTTGTGGTAATGACACAAGTTGACTTGCGTCAGATGTTAAGCAGGGACAGTTCTCCCACCTCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | TACATGAAGGAAAAGCATGCGTCACTTACCTGGCCATaGTCCAGGACTTTCCAGAAGCCGAAATGCAAGCGC | + |
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Preference number: 3 (lower is better) Translates to: YMKEKHASLTWP*SRTFQKPKCKR Trigger: GCGCTTGCATTTCGGCTTCTGGAAAGTCCTGGAGCATGGCCAGGTAAGTGACGCATGCTTTTCCTTCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CCA 72 bp | TTAAACTACTTTTGTGGAGTACATGGTGTGTGTCTGTaGGGAGGGGCGCAAGCCATGGAGTGTGTGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LNYFCGVHGVCL*GGAQAMECVEV Trigger: GACTTCCACACACTCCATGGCTTGCGCCCCTCCCCACAGACACACACCATGTACTCCACAAAAGTAGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CCA 72 bp | GGCATCTACATGAAGGAAAAGCATGCGTCACTTACCTaGCCATGCTCCAGGACTTTCCAGAAGCCGAAATGC | + |
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Preference number: 3 (lower is better) Translates to: GIYMKEKHASLT*PCSRTFQKPKC Trigger: GCATTTCGGCTTCTGGAAAGTCCTGGAGCATGGCCAGGTAAGTGACGCATGCTTTTCCTTCATGTAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | CCACTCCTTACAGCCAGGAGGTGGGAGAACTGTCCCTaGTTAACATCTGACGCAAGTCAACTTGTGTCATTA | + |
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Preference number: 3 (lower is better) Translates to: PLLTARRWENCP*LTSDASQLVSL Trigger: TAATGACACAAGTTGACTTGCGTCAGATGTTAAGCAGGGACAGTTCTCCCACCTCCTGGCTGTAAGGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | TTAAGGTGGGTTGGGCATCTACATGAAGGAAAAGCATaGGTCACTTACCTGGCCATGCTCCAGGACTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LRWVGHLHEGKA*VTYLAMLQDFP Trigger: TGGAAAGTCCTGGAGCATGGCCAGGTAAGTGACGCATGCTTTTCCTTCATGTAGATGCCCAACCCACCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | GAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTaGGCTATCTCACTGGCCAAAGGGCTGATACACTCT | + |
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Preference number: 3 (lower is better) Translates to: EVEDLAANAFIY*AISLAKGLIHS Trigger: AGAGTGTATCAGCCCTTTGGCCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CCA 72 bp | ATGTGTCCCCCAGAGTCTGAATTGAGGTTGAGGACTTaGCAGCAAATGCCTTTATCTACTGAGCTATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: MCPPESELRLRT*QQMPLSTELSH Trigger: GTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAATTCAGACTCTGGGGGACACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | ACTAGAGCGCTCACTGCCTGCCTTATAATTAACTCCTaGCAGCCTTTCTTAGAGAAGAGTCATTACAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: TRALTACLIINS*QPFLEKSHYSG Trigger: GCCACTGTAATGACTCTTCTCTAAGAAAGGCTGTCAGGAGTTAATTATAAGGCAGGCAGTGAGCGCTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CAA 90 bp | AGTTTAGTCATGCCTGTAGGTGGACAGATGGACATATGCTCTACCTGCCTCCCACAAAGACTCCAGAATTaGATCATAGGTATGCACATT | + |
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Preference number: 3 (lower is better) Translates to: SLVMPVGGQMDICSTCLPQRLQN*IIGMHI Trigger: AATGTGCATACCTATGATCAAATTCTGGAGTCTTTG...TGGGAGGCAGGTAGAGCATATGTCCATCTGTCCACCTACAGGCATGACTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CAA 90 bp | TGGACATATGCTCTACCTGCCTCCCATTTAATTTCAGTCACTCTATGTGTTGATGGGTACTTCTGCCTCTaGTCTTCACAATTAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: WTYALPASHLISVTLCVDGYFCL*SSQLGT Trigger: GGTCCCTAATTGTGAAGACAAGAGGCAGAAGTACCC...ATCAACACATAGAGTGACTGAAATTAAATGGGAGGCAGGTAGAGCATATGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CCA 72 bp | CTCCTGACAGCCTTTCTTAGAGAAGAGTCATTACAGTaGCTGCCACACACAACTGAAACATGCCAAAGAATT | + |
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Preference number: 3 (lower is better) Translates to: LLTAFLREESLQ*LPHTTETCQRI Trigger: AATTCTTTGGCATGTTTCAGTTGTGTGTGGCAGCCACTGTAATGACTCTTCTCTAAGAAAGGCTGTCAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCACTTTACATGGAGTTaGGCCTTCACAACTATTATG | + |
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Preference number: 3 (lower is better) Translates to: LRLRTWQQMPLSTELSHWHFTWS*AFTTIM Trigger: CATAATAGTTGTGAAGGCCAAACTCCATGTAAAGTG...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | CTGTACCAGAGAACTACTGGTCATACAAACCACACATaGCGGCTTCCTGGATTACTTGGTATTTATTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: LYQRTTGHTNHT*RLPGLLGIYLG Trigger: GCCTAAATAAATACCAAGTAATCCAGGAAGCCGTCATGTGTGGTTTGTATGACCAGTAGTTCTCTGGTACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | TTCTACTTTAAAACACTTCCCACCAAGGATCAGATGTaGGACAGAGTGTATGGGCTGTCTTGTATAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: FYFKTLPTKDQM*DRVYGLSCIEL Trigger: CAGTTCTATACAAGACAGCCCATACACTCTGTCTCACATCTGATCCTTGGTGGGAAGTGTTTTAAAGTAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | ATTTTAGGATTCCAAATAAGGAAAAGCAGCAGCGTTTaGCATTTCGAGAACGTCACTGATTCCCATGAATGC | + |
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Preference number: 3 (lower is better) Translates to: ILGFQIRKSSSV*HFENVTDSHEC Trigger: GCATTCATGGGAATCAGTGACGTTCTCGAAATGGCAAACGCTGCTGCTTTTCCTTATTTGGAATCCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CCA 72 bp | AACTACTGGTCATACAAACCACACATGACGGCTTCCTaGATTACTTGGTATTTATTTAGGCAGTTTGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: NYWSYKPHMTAS*ITWYLFRQFGV Trigger: AACCCCAAACTGCCTAAATAAATACCAAGTAATCCAGGAAGCCGTCATGTGTGGTTTGTATGACCAGTAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CAA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAAAATCCCACCCATTCCTaGGGTGAAGAAGTTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: HHLSFHMTYTSVEMETFQNPTHS*GEEVLA Trigger: TGCAAGAACTTCTTCACCCAAGGAATGGGTGGGATT...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR-3UTR CAA 90 bp | CACCACCTTTCTTTTCACATGACTTACACCTCTGTTGAAATGGAAACATTTCAAGAGTCTGAATTGAGGTaGAGGACTTGGCAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: HHLSFHMTYTSVEMETFQESELR*RTWQQM Trigger: CATTTGCTGCCAAGTCCTCAACCTCAATTCAGACTC...TTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | CAGAATTTGATCATAGGTATGCACATTGTGATCAGATaGAGTACGGAAGAGGCGTTTCTTTCAAAGTATGGT | + |
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Preference number: 3 (lower is better) Translates to: QNLIIGMHIVIR*STEEAFLSKYG Trigger: ACCATACTTTGAAAGAAACGCCTCTTCCGTACTGCATCTGATCACAATGTGCATACCTATGATCAAATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | CATTACCACAAGGGCTACACCACCTTTCTTTTCACATaGCTTACACCTCTGTTGAAATGGAAACATTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: HYHKGYTTFLFT*LTPLLKWKHFK Trigger: TTTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTGTAGCCCTTGTGGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CCA 72 bp | TATTTAATAACGTTCAGTGTAAATATGGGTAGTGACTaGGTACTTCTGCCTCTTGTCTTCACAATTAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: YLITFSVNMGSD*VLLPLVFTIRD Trigger: GTCCCTAATTGTGAAGACAAGAGGCAGAAGTACCCAGTCACTACCCATATTTACACTGAACGTTATTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | GATGCACACTTACATTACGTACAAAATCTCAACAGTTaGCGTCTGATACACAATAAATCCAAGAACAGCATC | + |
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Preference number: 3 (lower is better) Translates to: DAHLHYVQNLNS*RLIHNKSKNSI Trigger: GATGCTGTTCTTGGATTTATTGTGTATCAGACGTCAACTGTTGAGATTTTGTACGTAATGTAAGTGTGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR GCA 72 bp | AATCACCTTAAGTTTATGTTTCATCCAAAGAGCCAATaGCACTTGATGCTCACATGGCTTGTTTACTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: NHLKFMFHPKSQ*HLMLTWLVYLE Trigger: TTCTAAGTAAACAAGCCATGTGAGCATCAAGTGGCATTGGCTCTTTGGATGAAACATAAACTTAAGGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | ACCTGCCTCCCATTTAATTTCAGTCACTCTATGTGTTaGTACAATCACCTTAAGTTTATGTTTCATCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: TCLPFNFSHSMC*YNHLKFMFHPK Trigger: CTTTGGATGAAACATAAACTTAAGGTGATTGTATCAACACATAGAGTGACTGAAATTAAATGGGAGGCAGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | GAGAAGTTACTACAGTTACAAGGTGGATGGCTTTTATaGAATTGGCGATTGTCAACTAGATATTGCATATTT | + |
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Preference number: 3 (lower is better) Translates to: EKLLQLQGGWLL*NWRLSTRYCIF Trigger: AAATATGCAATATCTAGTTGACAATCGCCAATTTCATAAAAGCCATCCACCTTGTAACTGTAGTAACTTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR TCA 72 bp | ACACCACCTTTCTTTTCACATGACTTACACCTCTGTTaGAATGGAAACATTTCAAAACAATACATAGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: TPPFFSHDLHLC*NGNISKQYIAE Trigger: TTCAGCTATGTATTGTTTTGAAATGTTTCCATTTCAACAGAGGTGTAAGTCATGTGAAAAGAAAGGTGGTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR GCA 90 bp | GGGCGCAAGCCATGGAGTGTGTGGAAGTCAGAGGACAATGATGGGGTAGTTGGCGGGGGCAGTGTAGGCTaGAAATACTGGTTGCACAAA | + |
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Preference number: 4 (lower is better) Translates to: GRKPWSVWKSEDNDGVVGGGSVG*KYWLHK Trigger: TTTGTGCAACCAGTATTTGCAGCCTACACTGCCCCC...GCCAACTACCCCATCATTGTCCTCTGACTTCCACACACTCCATGGCTTGCGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CAA 72 bp | ATGACCCTTCCTGTCCTCTGTGGACTGATACACTGCTaGCCTAGTTTCCACTCCTTACAGCCAGGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: MTLPVLCGLIHC*PSFHSLQPGGG Trigger: CCCACCTCCTGGCTGTAAGGAGTGGAAACTAGGCAAGCAGTGTATCAGTCCACAGAGGACAGGAAGGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR TCA 90 bp | TTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCCAAAGCTCTTCAGGTCTCGATaGGCAATTGCAGGCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LRTWQQMPLSTELSHWPKLFRSR*AIAGFP Trigger: AGGGAAGCCTGCAATTGCTCATCGAGACCTGAAGAG...CTTTGGCCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR CCA 90 bp | ATAGGTATGCACATTGTGATCAGATGCAGTACGGAAGAGGCGTTTCTTTCAAAGCATGTCCTCATAGGATaGGTCACTGGGCACCATGTT | + |
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Preference number: 4 (lower is better) Translates to: IGMHIVIRCSTEEAFLSKHVLIG*VTGHHV Trigger: AACATGGTGCCCAGTGACCCATCCTATGAGGACATG...CTTTGAAAGAAACGCCTCTTCCGTACTGCATCTGATCACAATGTGCATACCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR TCA 90 bp | ATAGGTATGCACATTGTGATCAGATGCAGTACGGAAGAGGCGTTTCTTTCAAAGCTTCTGGTCCAAGTCTaGTTTCATACCAGTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: IGMHIVIRCSTEEAFLSKLLVQV*FHTSAM Trigger: CATGGCACTGGTATGAAATCAGACTTGGACCAGAAG...CTTTGAAAGAAACGCCTCTTCCGTACTGCATCTGATCACAATGTGCATACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR TCA 90 bp | TTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCCAAAGGGTGAATCCTTGCATTaGAAATCAGAGCCTTCATAC | + |
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Preference number: 4 (lower is better) Translates to: LRTWQQMPLSTELSHWPKGESLH*KSEPSY Trigger: GTATGAAGGCTCTGATTTTCAATGCAAGGATTCACC...CTTTGGCCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR GCA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGGGTTGTAACGACCCCTaGTTGAGATACTCTTACAAT | + |
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Preference number: 4 (lower is better) Translates to: LRLRTWQQMPLSTELSHWGCNDP*LRYSYN Trigger: ATTGTAAGAGTATCTCAAGCAGGGGTCGTTACAACC...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR TCA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGGAGCCATTTCCCAAATaGTCAAACCAAAGCTATAGA | + |
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Preference number: 4 (lower is better) Translates to: LRLRTWQQMPLSTELSHWEPFPK*SNQSYR Trigger: TCTATAGCTTTGGTTTGATCATTTGGGAAATGGCTC...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR GCA 90 bp | TTGAGGTTGAGGACTTGGCAGCAAATGCCTTTATCTACTGAGCTATCTCACTGGCTTTCGGTGAATCCTTaGATTGAAAATCAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LRLRTWQQMPLSTELSHWLSVNP*IENQSL Trigger: AAGGCTCTGATTTTCAATGCAAGGATTCACCGAAAG...CCAGTGAGATAGCTCAGTAGATAAAGGCATTTGCTGCCAAGTCCTCAACCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CAA 72 bp | GAAATCTGCCCTGGAATAGACTACTCAATATCCAATTaGACCTTAGGCCAAATCAGAGATGCAAGGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EICPGIDYSISN*TLGQIRDARFL Trigger: CAAGAACCTTGCATCTCTGATTTGGCCTAAGGTCAAATTGGATATTGAGTAGTCTATTCCAGGGCAGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR TCA 90 bp | GCCTCCCATTTAATTTCAGTCACTCTATGTGTTGATACAATCACCTTAAGTTTACCAAGTATATTTTCATaGCGCATTAACACCGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ASHLISVTLCVDTITLSLPSIFS*RINTVW Trigger: CCAGACGGTGTTAATGCGTCATGAAAATATACTTGG...TAAACTTAAGGTGATTGTATCAACACATAGAGTGACTGAAATTAAATGGGAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CAA 72 bp | CTTAAGTTTATGTTTCATCCAAAGAGCCAATGCCACTaGATGCTCACATGGCTTGTTTACTTAGAACATTTA | + |
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Preference number: 4 (lower is better) Translates to: LKFMFHPKSQCH*MLTWLVYLEHL Trigger: TAAATGTTCTAAGTAAACAAGCCATGTGAGCATCAAGTGGCATTGGCTCTTTGGATGAAACATAAACTTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| 3UTR CAA 72 bp | AAAACAGTCCAAGTCTATGGACACTTTACATGGAGTTaGGCCTTCACAACTATTATGCTAAAAATAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KTVQVYGHFTWS*AFTTIMLKIKS Trigger: TGACTTTATTTTTAGCATAATAGTTGTGAAGGCCAAACTCCATGTAAAGTGTCCATAGACTTGGACTGTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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| CDS-3UTR CAA 90 bp | TGGACATATGCTCTACCTGCCTCCCATTTAATTTCAGTCACTCTATGTGTTGATTTTGCAAGTGTCTTCTaGATTCTCAAAGCTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: WTYALPASHLISVTLCVDFASVF*ILKAVS Trigger: ACTCACAGCTTTGAGAATCAAGAAGACACTTGCAAA...ATCAACACATAGAGTGACTGAAATTAAATGGGAGGCAGGTAGAGCATATGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049005.15 |
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