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Pregenerated sensors for BMP8B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002384

Ensembl transcript IDs: ENSMUST00000002457.2

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCCTCACCCTGCCATACCAGCTCTGCCACCTCTGCACGGACCGTaGGCACCTGAGGGGCAGTGCCTCTTACCTGAGGACTGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: SPHPAIPALPPLHGP*APEGQCLLPEDCLA
Trigger: AGCCAGGCAGTCCTCAGGTAAGAGGCACTGCCCCTCAGGTGCTCACGGTCCGTGCAGAGGTGGCAGAGCTGGTATGGCAGGGTGAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 90 bp CTTAGTAGCATAGCTGTGTTTCTCCTCACCCTGCCATACCAGCTCTaGCACCTCTGCACGGACCGTGAGCACCTGAGGGGCAGTGCCTCT +
Preference number: 1 (lower is better)
Translates to: LSSIAVFLLTLPYQL*HLCTDREHLRGSAS
Trigger: AGAGGCACTGCCCCTCAGGTGCTCACGGTCCGTGCAGAGGTGGCAGAGCTGGTATGGCAGGGTGAGGAGAAACACAGCTATGCTACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 90 bp GACCGTGAGCACCTGAGGGGCAGTGCCTCTTACCTGAGGACTGCCTaGCTGCTGTTCTGGGGTCACCTTGTTTGTGATACCTTTGCTCCA +
Preference number: 1 (lower is better)
Translates to: DREHLRGSASYLRTA*LLFWGHLVCDTFAP
Trigger: TGGAGCAAAGGTATCACAAACAAGGTGACCCCAGAACAGCAGCCAGGCAGTCCTCAGGTAAGAGGCACTGCCCCTCAGGTGCTCACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 90 bp CTGAGGGGCAGTGCCTCTTACCTGAGGACTGCCTGGCTGCTGTTCTaGGGTCACCTTGTTTGTGATACCTTTGCTCCAGCACCAAGACAG +
Preference number: 1 (lower is better)
Translates to: LRGSASYLRTAWLLF*GHLVCDTFAPAPRQ
Trigger: CTGTCTTGGTGCTGGAGCAAAGGTATCACAAACAAGGTGACCCCAGAACAGCAGCCAGGCAGTCCTCAGGTAAGAGGCACTGCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 90 bp AGATGTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTaGTGGGCAGGAGTCCAGCATAGCTCTGGAGCCAGGGCAAGAATG +
Preference number: 1 (lower is better)
Translates to: RCHSPLMGRHGTLVL*WAGVQHSSGARARM
Trigger: CATTCTTGCCCTGGCTCCAGAGCTATGCTGGACTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 90 bp CCCTGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTaGAGTGGAGGTAGGTTGGAGCTTGGCCTGCTTATTGCCAGTGCC +
Preference number: 1 (lower is better)
Translates to: PCTDEPNLCQRSSRW*SGGRLELGLLIASA
Trigger: GGCACTGGCAATAAGCAGGCCAAGCTCCAACCTACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 90 bp GACTTCTGTGCCAATCCCAAAGGACATAGATGCCCCTGGCTGCATTaGGGAGTTTGGGGAGATGAGAGATGGGCTACTGAGGTCACCAGG +
Preference number: 1 (lower is better)
Translates to: DFCANPKGHRCPWLH*GVWGDERWATEVTR
Trigger: CCTGGTGACCTCAGTAGCCCATCTCTCATCTCCCCAAACTCCCCAATGCAGCCAGGGGCATCTATGTCCTTTGGGATTGGCACAGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 90 bp AAACCCTGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATaGTGCAGTGGAGGTAGGTTGGAGCTTGGCCTGCTTATTGCCAGT +
Preference number: 1 (lower is better)
Translates to: KPCTDEPNLCQRSSR*CSGGRLELGLLIAS
Trigger: ACTGGCAATAAGCAGGCCAAGCTCCAACCTACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 90 bp GATTGTACTGCCCACATTGGATTGGATTTTCCTCCATCACAAAAATaGCCCAGTCTGATGGAGGCAATTCCCTACTGGAGGGTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: DCTAHIGLDFPPSQK*PSLMEAIPYWRVPG
Trigger: ACCTGGGACCCTCCAGTAGGGAATTGCCTCCATCAGACTGGGGCATTTTTGTGATGGAGGAAAATCCAATCCAATGTGGGCAGTACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 90 bp CCTCCATCACAAAAATGCCCCAGTCTGATGGAGGCAATTCCCTACTaGAGGGTCCCAGGTGTCAAGTTGATAACCAAGATTAGCTGTCAC +
Preference number: 1 (lower is better)
Translates to: PPSQKCPSLMEAIPY*RVPGVKLITKISCH
Trigger: GTGACAGCTAATCTTGGTTATCAACTTGACACCTGGGACCCTCCAGTAGGGAATTGCCTCCATCAGACTGGGGCATTTTTGTGATGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 90 bp GTCCCAGGTGTCAAGTTGATAACCAAGATTAGCTGTCACAAACCCTaGACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGC +
Preference number: 1 (lower is better)
Translates to: VPGVKLITKISCHKP*TDEPNLCQRSSRWC
Trigger: GCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGTGACAGCTAATCTTGGTTATCAACTTGACACCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 90 bp CTGGCTGTTGTCAAGGTGTGTGACTGTGTGCCAGCCTATAGTAGCTaGACCAAGGACTATGGATCAGGGAAACTGTTGGCATTTTCTTTA +
Preference number: 1 (lower is better)
Translates to: LAVVKVCDCVPAYSS*TKDYGSGKLLAFSL
Trigger: TAAAGAAAATGCCAACAGTTTCCCTGATCCATAGTCCTTGGTGCAGCTACTATAGGCTGGCACACAGTCACACACCTTGACAACAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR TCA 90 bp GAGGAAGGGCTTTACTTACTTGACTTGTACATCATAGTTTATCACTaGGGGAAGTCAGGGCAGCAACCGTGGATGAATGCTGCTGTTTAT +
Preference number: 1 (lower is better)
Translates to: EEGLYLLDLYIIVYH*GKSGQQPWMNAAVY
Trigger: ATAAACAGCAGCATTCATCCACGGTTGCTGCCCTGACTTCCCTCAGTGATAAACTATGATGTACAAGTCAAGTAAGTAAAGCCCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CCA 90 bp GTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTGCTGGGCAGGAGGCCTGGCTGCTGTTCTaGGGTCACCTTGTTTGTGAT +
Preference number: 2 (lower is better)
Translates to: VIVLLWEDMGRWSSAGQEAWLLF*GHLVCD
Trigger: ATCACAAACAAGGTGACCCCAGAACAGCAGCCAGGC...CTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CCA 90 bp GTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTGCTGGGCAGGAGGTTGGTTTCCTGCCTTaGAAGAGAGGCCTGACTAGA +
Preference number: 2 (lower is better)
Translates to: VIVLLWEDMGRWSSAGQEVGFLP*KRGLTR
Trigger: TCTAGTCAGGCCTCTCTTCCAAGGCAGGAAACCAAC...CTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 90 bp GGACTGCCTGGCTGCTGTTCTGGGGTCACCTTGTTTGTGATACCTTaGCTCCAGCACCAAGACAGGGCACAACTTTTTCTGGCTGTTGTC +
Preference number: 2 (lower is better)
Translates to: GLPGCCSGVTLFVIP*LQHQDRAQLFLAVV
Trigger: GACAACAGCCAGAAAAAGTTGTGCCCTGTCTTGGTGCTGGAGCAAAGGTATCACAAACAAGGTGACCCCAGAACAGCAGCCAGGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR TCA 90 bp AGAGATTGTACTGCCCACATTGGATTGGATTTTCCTCCATCACAAAAATGCCCCCGGACCGTGAGCACCTaGGGGGCAGTGCCTCTTACC +
Preference number: 2 (lower is better)
Translates to: RDCTAHIGLDFPPSQKCPRTVST*GAVPLT
Trigger: GGTAAGAGGCACTGCCCCTCAGGTGCTCACGGTCCG...GGGGCATTTTTGTGATGGAGGAAAATCCAATCCAATGTGGGCAGTACAATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR GCA 90 bp ACAAACCCTGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAGCTTGGCCTGCTTATTaGCAGTGCCAAGAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: TNPAQMNQTSARDHPDGAAWPAY*QCQESP
Trigger: GGGACTCTCTTGGCACTGGCAATAAGCAGGCCAAGC...TGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CCA 90 bp ATAACCAAGATTAGCTGTCACAAACCCTGCACAGATGAACCAAACCTCTGCCAGTTAGCTGGCCTCTTGTaGCTGCCTGTGGCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: ITKISCHKPCTDEPNLCQLAGLL*LPVARG
Trigger: ACCTCTGGCCACAGGCAGCCACAAGAGGCCAGCTAA...CTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGTGACAGCTAATCTTGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CCA 90 bp ATAACCAAGATTAGCTGTCACAAACCCTGCACAGATGAACCAAACCTCTGCCAGTACCTGAGGACTGCCTaGCTGCTGTTCTGGGGTCAC +
Preference number: 2 (lower is better)
Translates to: ITKISCHKPCTDEPNLCQYLRTA*LLFWGH
Trigger: GTGACCCCAGAACAGCAGCCAGGCAGTCCTCAGGTA...CTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGTGACAGCTAATCTTGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR TCA 90 bp ACAAACCCTGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAATGTGGACATGGAGTTaGAAGCACTGCCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: TNPAQMNQTSARDHPDGAMWTWS*KHCLPS
Trigger: AGAGGGAAGGCAGTGCTTTCAACTCCATGTCCACAT...TGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR GCA 90 bp TGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAGTGGAGGTCTAGAAATCCCATTTTaGACCCCCAAGAGACAGGCT +
Preference number: 2 (lower is better)
Translates to: CTDEPNLCQRSSRWCSGGLEIPF*TPKRQA
Trigger: AGCCTGTCTCTTGGGGGTGCAAAATGGGATTTCTAG...ACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CCA 90 bp ATAGATGTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTGCTGGGCCATCTTCTCAGCCTTaGCAAAAAGAACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: IDVIVLLWEDMGRWSSAGPSSQP*QKEQRG
Trigger: CCCTCTCTGTTCTTTTTGCCAAGGCTGAGAAGATGG...CCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGACATCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR TCA 90 bp AGAGATTGTACTGCCCACATTGGATTGGATTTTCCTCCATCACAAAAATGCCCCCAAACCCTGCACAGATaGACCAAACCTCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RDCTAHIGLDFPPSQKCPQTLHR*TKPLPE
Trigger: CTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTG...GGGGCATTTTTGTGATGGAGGAAAATCCAATCCAATGTGGGCAGTACAATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 90 bp GTTCCAGGTTCAAGTCAGGCTGGGCCAGTAGTGATCATGAATAAGTaGGTAAATTGGACTTCTGTGCCAATCCCAAAGGACATAGATGCC +
Preference number: 2 (lower is better)
Translates to: VPGSSQAGPVVIMNK*VNWTSVPIPKDIDA
Trigger: GGCATCTATGTCCTTTGGGATTGGCACAGAAGTCCAATTTACCAACTTATTCATGATCACTACTGGCCCAGCCTGACTTGAACCTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR TCA 72 bp CCTGCCATACCAGCTCTGCCACCTCTGCACGGACCGTaGGCACCTGAGGGGCAGTGCCTCTTACCTGAGGAC +
Preference number: 3 (lower is better)
Translates to: PAIPALPPLHGP*APEGQCLLPED
Trigger: GTCCTCAGGTAAGAGGCACTGCCCCTCAGGTGCTCACGGTCCGTGCAGAGGTGGCAGAGCTGGTATGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 72 bp ATAGCTGTGTTTCTCCTCACCCTGCCATACCAGCTCTaGCACCTCTGCACGGACCGTGAGCACCTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: IAVFLLTLPYQL*HLCTDREHLRG
Trigger: GCCCCTCAGGTGCTCACGGTCCGTGCAGAGGTGGCAGAGCTGGTATGGCAGGGTGAGGAGAAACACAGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 72 bp AGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTaGTGGGCAGGAGTCCAGCATAGCTCTGGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: SPLMGRHGTLVL*WAGVQHSSGAR
Trigger: CCTGGCTCCAGAGCTATGCTGGACTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp GTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTGCTGGGCAGGAGAGGCTGGCCTTGAACTaGCCTCAGCTTCCCAAGTGC +
Preference number: 3 (lower is better)
Translates to: VIVLLWEDMGRWSSAGQERLALN*PQLPKC
Trigger: GCACTTGGGAAGCTGAGGCAAGTTCAAGGCCAGCCT...CTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR TCA 72 bp CCCTCTTTGTTGGTTTCCTGCCTTGGAAGAGAGGCCTaGCTAGATAGATGGGATGGCAGCAGGCTGTTGGGC +
Preference number: 3 (lower is better)
Translates to: PSLLVSCLGREA*LDRWDGSRLLG
Trigger: GCCCAACAGCCTGCTGCCATCCCATCTATCTAGTCAGGCCTCTCTTCCAAGGCAGGAAACCAACAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 72 bp AAAGGACATAGATGCCCCTGGCTGCATTGGGGAGTTTaGGGAGATGAGAGATGGGCTACTGAGGTCACCAGG +
Preference number: 3 (lower is better)
Translates to: KGHRCPWLHWGV*GDERWATEVTR
Trigger: CCTGGTGACCTCAGTAGCCCATCTCTCATCTCCCCAAACTCCCCAATGCAGCCAGGGGCATCTATGTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 72 bp AGTGCCTCTTACCTGAGGACTGCCTGGCTGCTGTTCTaGGGTCACCTTGTTTGTGATACCTTTGCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: SASYLRTAWLLF*GHLVCDTFAPA
Trigger: TGCTGGAGCAAAGGTATCACAAACAAGGTGACCCCAGAACAGCAGCCAGGCAGTCCTCAGGTAAGAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 72 bp CTTTGCTCCAGCACCAAGACAGGGCACAACTTTTTCTaGCTGTTGTCAAGGTGTGTGACTGTGTGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: LCSSTKTGHNFF*LLSRCVTVCQP
Trigger: AGGCTGGCACACAGTCACACACCTTGACAACAGCCAGAAAAAGTTGTGCCCTGTCTTGGTGCTGGAGCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 72 bp AGGCTGCAGTTCTTGATAGATGTCATAGTCCTCTTATaGGAAGACATGGGACGCTGGTCCTCTGCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: RLQFLIDVIVLL*EDMGRWSSAGQ
Trigger: CTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGACATCTATCAAGAACTGCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp GTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTGCTGGGCAGGAGAACTTTTTCTGGCTGTaGTCAAGGTGTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: VIVLLWEDMGRWSSAGQENFFWL*SRCVTV
Trigger: CACAGTCACACACCTTGACAACAGCCAGAAAAAGTT...CTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 72 bp AAATTGGACTTCTGTGCCAATCCCAAAGGACATAGATaGCCCTGGCTGCATTGGGGAGTTTGGGGAGATGAG +
Preference number: 3 (lower is better)
Translates to: KLDFCANPKGHR*PWLHWGVWGDE
Trigger: CTCATCTCCCCAAACTCCCCAATGCAGCCAGGGGCATCTATGTCCTTTGGGATTGGCACAGAAGTCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 72 bp GTCAAGGTGTGTGACTGTGTGCCAGCCTATAGTAGCTaGACCAAGGACTATGGATCAGGGAAACTGTTGGCA +
Preference number: 3 (lower is better)
Translates to: VKVCDCVPAYSS*TKDYGSGKLLA
Trigger: TGCCAACAGTTTCCCTGATCCATAGTCCTTGGTGCAGCTACTATAGGCTGGCACACAGTCACACACCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp TTATCACTGAGGGAAGTCAGGGCAGCAACCGTGGATGAATGCTGCTGTTTATACTGCCTTCCCTCTTTGTaGGTTTCCTGCCTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: LSLREVRAATVDECCCLYCLPSL*VSCLGR
Trigger: TCTTCCAAGGCAGGAAACCAACAAAGAGGGAAGGCA...GTATAAACAGCAGCATTCATCCACGGTTGCTGCCCTGACTTCCCTCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp TTATCACTGAGGGAAGTCAGGGCAGCAACCGTGGATGAATGCTGCTGTTTATACAATGTGGACATGGAGTaGAAAGCACTGCCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: LSLREVRAATVDECCCLYNVDME*KALPSL
Trigger: GAGGGAAGGCAGTGCTTTCAACTCCATGTCCACATT...GTATAAACAGCAGCATTCATCCACGGTTGCTGCCCTGACTTCCCTCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp TTATCACTGAGGGAAGTCAGGGCAGCAACCGTGGATGAATGCTGCTGTTTATACACCATCTTCTCAGCCTaGGCAAAAAGAACAGAGAGG +
Preference number: 3 (lower is better)
Translates to: LSLREVRAATVDECCCLYTIFSA*AKRTER
Trigger: CCTCTCTGTTCTTTTTGCCAAGGCTGAGAAGATGGT...GTATAAACAGCAGCATTCATCCACGGTTGCTGCCCTGACTTCCCTCAGTGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp TGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAGTGGAGGTGATATGAATGAGATCTaGATATATATCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: CTDEPNLCQRSSRWCSGGDMNEI*IYIPGW
Trigger: CCAGCCTGGGATATATATCAAGATCTCATTCATATC...ACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp ACAAACCCTGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCATTTAGTCTCAATTTGTaGGGGGTCTTCAGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: TNPAQMNQTSARDHPDGAFSLNL*GVFRKD
Trigger: GTCTTTCCTGAAGACCCCCAACAAATTGAGACTAAA...TGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR TCA 72 bp TTTATCACTGAGGGAAGTCAGGGCAGCAACCGTGGATaGATGCTGCTGTTTATACAACCTGCTCAGAGATTG +
Preference number: 3 (lower is better)
Translates to: FITEGSQGSNRG*MLLFIQPAQRL
Trigger: CAATCTCTGAGCAGGTTGTATAAACAGCAGCATTCATCCACGGTTGCTGCCCTGACTTCCCTCAGTGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR-3UTR CAA 90 bp TGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAGTGGAGGTGTGATCATGAATAAGTaGGTAAATTGGACTTCTGTG +
Preference number: 3 (lower is better)
Translates to: CTDEPNLCQRSSRWCSGGVIMNK*VNWTSV
Trigger: CACAGAAGTCCAATTTACCAACTTATTCATGATCAC...ACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 72 bp GTCAAGTTGATAACCAAGATTAGCTGTCACAAACCCTaGACAGATGAACCAAACCTCTGCCAGAGATCATCC +
Preference number: 3 (lower is better)
Translates to: VKLITKISCHKP*TDEPNLCQRSS
Trigger: GGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGTGACAGCTAATCTTGGTTATCAACTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CCA 72 bp GCTGGGCCAGTAGTGATCATGAATAAGTTGGTAAATTaGACTTCTGTGCCAATCCCAAAGGACATAGATGCC +
Preference number: 3 (lower is better)
Translates to: AGPVVIMNKLVN*TSVPIPKDIDA
Trigger: GGCATCTATGTCCTTTGGGATTGGCACAGAAGTCCAATTTACCAACTTATTCATGATCACTACTGGCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR TCA 72 bp ATGAATGAGATCTTGATATATATCCCAGGCTGGCCTTaGACTTGCCTCAGCTTCCCAAGTGCTAAGATTACA +
Preference number: 3 (lower is better)
Translates to: MNEILIYIPGWP*TCLSFPSAKIT
Trigger: TGTAATCTTAGCACTTGGGAAGCTGAGGCAAGTTCAAGGCCAGCCTGGGATATATATCAAGATCTCATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR GCA 72 bp ATGCTGCTGTTTATACAACCTGCTCAGAGATTGTACTaGCCACATTGGATTGGATTTTCCTCCATCACAAAA +
Preference number: 3 (lower is better)
Translates to: MLLFIQPAQRLY*PHWIGFSSITK
Trigger: TTTTGTGATGGAGGAAAATCCAATCCAATGTGGGCAGTACAATCTCTGAGCAGGTTGTATAAACAGCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR GCA 90 bp CCATACCAGCTCTGCCACCTCTGCACGGACCGTGAGCACCTGAGGGGCAGTGCCCTAGGCCAGGATCTATaGTGTGCCCATCCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: PYQLCHLCTDREHLRGSALGQDL*CAHPRF
Trigger: AAACCGAGGATGGGCACAGCATAGATCCTGGCCTAG...GGCACTGCCCCTCAGGTGCTCACGGTCCGTGCAGAGGTGGCAGAGCTGGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR TCA 90 bp CCATACCAGCTCTGCCACCTCTGCACGGACCGTGAGCACCTGAGGGGCAGTGCCAGTGCGGCAGCTGGTTaGTTTGATTTAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PYQLCHLCTDREHLRGSASAAAG*FDLAAS
Trigger: AGAAGCAGCTAAATCAAATCAACCAGCTGCCGCACT...GGCACTGCCCCTCAGGTGCTCACGGTCCGTGCAGAGGTGGCAGAGCTGGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR GCA 90 bp TTATCACTGAGGGAAGTCAGGGCAGCAACCGTGGATGAATGCTGCTGTTTATACGGCGCAGACGCTGGCTaGTGGGCAGCCCCGACCGGT +
Preference number: 4 (lower is better)
Translates to: LSLREVRAATVDECCCLYGADAG*WAAPTG
Trigger: ACCGGTCGGGGCTGCCCAGCAGCCAGCGTCTGCGCC...GTATAAACAGCAGCATTCATCCACGGTTGCTGCCCTGACTTCCCTCAGTGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR CCA 90 bp GTCATAGTCCTCTTATGGGAAGACATGGGACGCTGGTCCTCTGCTGGGCAGGAGGCCCGCACAGGACTCTaGTTGGCCCTGAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VIVLLWEDMGRWSSAGQEARTGL*LALKKP
Trigger: TGGTTTCTTCAGGGCCAACCAGAGTCCTGTGCGGGC...CTCCTGCCCAGCAGAGGACCAGCGTCCCATGTCTTCCCATAAGAGGACTATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR TCA 90 bp CTGCATTGGGGAGTTTGGGGAGATGAGAGATGGGCTACTGAGGTCACCAGGGTTCAAGGTCACGGAAGCTaGCATAGAGCTCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: LHWGVWGDERWATEVTRVQGHGS*HRAHAC
Trigger: GCAGGCATGAGCTCTATGTCAGCTTCCGTGACCTTG...AACCCTGGTGACCTCAGTAGCCCATCTCTCATCTCCCCAAACTCCCCAATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR GCA 90 bp CTGCATTGGGGAGTTTGGGGAGATGAGAGATGGGCTACTGAGGTCACCAGGGTTTGCGGCAAACTTCTCTaGCGTGAGAACCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LHWGVWGDERWATEVTRVCGKLL*RENRGH
Trigger: ATGGCCACGGTTCTCACGGCAGAGAAGTTTGCCGCA...AACCCTGGTGACCTCAGTAGCCCATCTCTCATCTCCCCAAACTCCCCAATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 72 bp TGCCAGAGATCATCCAGATGGTGCAGTGGAGGTAGGTaGGAGCTTGGCCTGCTTATTGCCAGTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: CQRSSRWCSGGR*ELGLLIASAKR
Trigger: TCTCTTGGCACTGGCAATAAGCAGGCCAAGCTCCAACCTACCTCCACTGCACCATCTGGATGATCTCTGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR GCA 90 bp TGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAGTGGAGGTCATAGAGCTCATGCCTaGGGCAAACTTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CTDEPNLCQRSSRWCSGGHRAHA*GKLLCR
Trigger: ACGGCAGAGAAGTTTGCCGCAGGCATGAGCTCTATG...ACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR TCA 90 bp TCTGTGCCAATCCCAAAGGACATAGATGCCCCTGGCTGCATTGGGGAGTTTGGGGGCAGCTGGTTGATTTaGTTTAGCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SVPIPKDIDAPGCIGEFGGSWLI*FSCFFF
Trigger: GAAGAAGAAGCAGCTAAATCAAATCAACCAGCTGCC...CCCAAACTCCCCAATGCAGCCAGGGGCATCTATGTCCTTTGGGATTGGCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR TCA 90 bp TCTGTGCCAATCCCAAAGGACATAGATGCCCCTGGCTGCATTGGGGAGTTTGGGGCTCCCTGCGCAGGATaGCATTATTGTTTCTATCAT +
Preference number: 4 (lower is better)
Translates to: SVPIPKDIDAPGCIGEFGAPCAG*HYCFYH
Trigger: ATGATAGAAACAATAATGTCATCCTGCGCAGGGAGC...CCCAAACTCCCCAATGCAGCCAGGGGCATCTATGTCCTTTGGGATTGGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 72 bp GGCTGCTGTTCTGGGGTCACCTTGTTTGTGATACCTTaGCTCCAGCACCAAGACAGGGCACAACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GCCSGVTLFVIP*LQHQDRAQLFL
Trigger: CAGAAAAAGTTGTGCCCTGTCTTGGTGCTGGAGCAAAGGTATCACAAACAAGGTGACCCCAGAACAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 72 bp ACAGAGAGGGCCAAGACTGTGAATGTGGACATGGAGTaGAAAGCACTGCCTTCCCTCTTTGTTGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TERAKTVNVDME*KALPSLFVGFL
Trigger: CAGGAAACCAACAAAGAGGGAAGGCAGTGCTTTCAACTCCATGTCCACATTCACAGTCTTGGCCCTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 72 bp GAGAGTCCCGAGAAGCCTACTGGGTTTAGTCTCAATTaGTTGGGGGTCTTCAGGAAAGACAGCTCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESPEKPTGFSLN*LGVFRKDSSRR
Trigger: CCTTCTAGAGCTGTCTTTCCTGAAGACCCCCAACAAATTGAGACTAAACCCAGTAGGCTTCTCGGGACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR CCA 90 bp AGAGATTGTACTGCCCACATTGGATTGGATTTTCCTCCATCACAAAAATGCCCCGAATTCCTTCCAGTGTaGCTCCTGGTAGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RDCTAHIGLDFPPSQKCPEFLPV*LLVAQG
Trigger: ACCCTGGGCTACCAGGAGCCACACTGGAAGGAATTC...GGGGCATTTTTGTGATGGAGGAAAATCCAATCCAATGTGGGCAGTACAATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR TCA 90 bp ATAACCAAGATTAGCTGTCACAAACCCTGCACAGATGAACCAAACCTCTGCCAGAGCACACCTTGGGGATaGTATCTGGCTTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: ITKISCHKPCTDEPNLCQSTPWG*YLASSD
Trigger: ATCTGATGAAGCCAGATATCATCCCCAAGGTGTGCT...CTGGCAGAGGTTTGGTTCATCTGTGCAGGGTTTGTGACAGCTAATCTTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR CCA 90 bp AGAGATTGTACTGCCCACATTGGATTGGATTTTCCTCCATCACAAAAATGCCCCTGGGTTAGGTCAAAGTaGAATTCCTTCCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RDCTAHIGLDFPPSQKCPWVRSK*NSFQCG
Trigger: GCCACACTGGAAGGAATTCCACTTTGACCTAACCCA...GGGGCATTTTTGTGATGGAGGAAAATCCAATCCAATGTGGGCAGTACAATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 72 bp TCAAGTCAGGCTGGGCCAGTAGTGATCATGAATAAGTaGGTAAATTGGACTTCTGTGCCAATCCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SSQAGPVVIMNK*VNWTSVPIPKD
Trigger: GTCCTTTGGGATTGGCACAGAAGTCCAATTTACCAACTTATTCATGATCACTACTGGCCCAGCCTGACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
3UTR CAA 72 bp AGTAGCTGCACCAAGGACTATGGATCAGGGAAACTGTaGGCATTTTCTTTAATGACGATGCCTAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: SSCTKDYGSGKL*AFSLMTMPKSR
Trigger: TCTGGATTTAGGCATCGTCATTAAAGAAAATGCCAACAGTTTCCCTGATCCATAGTCCTTGGTGCAGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS TCA 90 bp ACTCCTAGTCGACGCTGGGGAAAGACGTGCGGGGGATGCGAGAGGTaGCCGCCGCCCAACACGCACAGAGCCAGGCCCAGTAGCCATAGG +
Preference number: 5 (lower is better)
Translates to: TPSRRWGKTCGGCER*PPPNTHRARPSSHR
Trigger: CCTATGGCTACTGGGCCTGGCTCTGTGCGTGTTGGGCGGCGGTCACCTCTCGCATCCCCCGCACGTCTTTCCCCAGCGTCGACTAGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS TCA 90 bp TCCACTATGTTGACAAAGCTCATAATCAGGTCAGCACGGTCCAAGTaGGGCTGCGGGGTCCCACCGCCACTGTCATCCGTCATGGCACGG +
Preference number: 5 (lower is better)
Translates to: STMLTKLIIRSARSK*GCGVPPPLSSVMAR
Trigger: CCGTGCCATGACGGATGACAGTGGCGGTGGGACCCCGCAGCCTCACTTGGACCGTGCTGACCTGATTATGAGCTTTGTCAACATAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR CAA 90 bp CTGCATTGGGGAGTTTGGGGAGATGAGAGATGGGCTACTGAGGTCACCAGGGTTGGCACACAGCACACCTaGGGGATGATATCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LHWGVWGDERWATEVTRVGTQHT*GMISGF
Trigger: GAAGCCAGATATCATCCCCAAGGTGTGCTGTGTGCC...AACCCTGGTGACCTCAGTAGCCCATCTCTCATCTCCCCAAACTCCCCAATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR CAA 90 bp TGCACAGATGAACCAAACCTCTGCCAGAGATCATCCAGATGGTGCAGTGGAGGTTCTTCTTCAGTGGTCTaGCTGTTCGAGGGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: CTDEPNLCQRSSRWCSGGSSSVV*LFEGPA
Trigger: TGCGGGCCCCTCGAACAGCAAGACCACTGAAGAAGA...ACCTCCACTGCACCATCTGGATGATCTCTGGCAGAGGTTTGGTTCATCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS-3UTR CAA 90 bp TCTGTGCCAATCCCAAAGGACATAGATGCCCCTGGCTGCATTGGGGAGTTTGGGATTCCTAGGTGTTTGTaGGAGTGCGGCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SVPIPKDIDAPGCIGEFGIPRCL*ECGSWL
Trigger: CAACCAGCTGCCGCACTCCAACAAACACCTAGGAAT...CCCAAACTCCCCAATGCAGCCAGGGGCATCTATGTCCTTTGGGATTGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS TCA 72 bp CGACGCTGGGGAAAGACGTGCGGGGGATGCGAGAGGTaGCCGCCGCCCAACACGCACAGAGCCAGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: RRWGKTCGGCER*PPPNTHRARPS
Trigger: ACTGGGCCTGGCTCTGTGCGTGTTGGGCGGCGGTCACCTCTCGCATCCCCCGCACGTCTTTCCCCAGCGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS CCA 72 bp ACGGTACAGGTCCAACATAAAGAGGGGCGCAGACGCTaGCTGCTGGGCAGCCCCGACCGGTGCTCGGGATCG +
Preference number: 6 (lower is better)
Translates to: TVQVQHKEGRRR*LLGSPDRCSGS
Trigger: CGATCCCGAGCACCGGTCGGGGCTGCCCAGCAGCCAGCGTCTGCGCCCCTCTTTATGTTGGACCTGTACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2
CDS TCA 72 bp CCTAGGTGTTTGTTGGAGTGCGGCAGCTGGTTGATTTaGTTTAGCTGCTTCTTCTTCAGTGGTCTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: PRCLLECGSWLI*FSCFFFSGLAV
Trigger: AACAGCAAGACCACTGAAGAAGAAGCAGCTAAATCAAATCAACCAGCTGCCGCACTCCAACAAACACCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002457.2