Pregenerated sensors for BMP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032179Ensembl transcript IDs: ENSMUST00000012281.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCCAGCACATTTTATGCATGAAATGACTCTTGTCTGTAGGGAATaGAATGGAGTACATGTGATTATTTCCTTACTTTGGGTTAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VPAHFMHEMTLVCRE*NGVHVIISLLWVKF Trigger: AAACTTAACCCAAAGTAAGGAAATAATCACATGTACTCCATTCCATTCCCTACAGACAAGAGTCATTTCATGCATAAAATGTGCTGGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR TCA 90 bp | CGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCGGAATGGAGTACATGTaGTTATTTCCTTACTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RTTLHTTPEPSLPYLLMLGMEYM*LFPYFG Trigger: CCCAAAGTAAGGAAATAATCACATGTACTCCATTCC...GAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR CCA 90 bp | CGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCCTTGTCTGTAGGGAATaGAATGGAGTACATGTGATT | + |
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Preference number: 2 (lower is better) Translates to: RTTLHTTPEPSLPYLLMLLVCRE*NGVHVI Trigger: AATCACATGTACTCCATTCCATTCCCTACAGACAAG...GAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCATAGAGAGATGAAATaGCCCAGGTTGATTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHHREMK*PRLILG Trigger: TCCTAAAATCAACCTGGGTCATTTCATCTCTCTATG...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACTACCCTACTTACTCATaGTCAGAGGAAGTTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHYPTYS*SEEVFQ Trigger: TTGGAAAACTTCCTCTGAGCATGAGTAAGTAGGGTA...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTGCTGTTTTAAAATGGTaGTTCTGTCAAAGCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPAVLKW*FCQSNS Trigger: AGAGTTGCTTTGACAGAACCACCATTTTAAAACAGC...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACTTAGCTGTTTTAAAATaGTGGTTCTGTCAAAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHLAVLK*WFCQSN Trigger: GTTGCTTTGACAGAACCACCATTTTAAAACAGCTAA...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTTCCCTACCCTACTTACTCATGCTCAGAGGAAGTTTTCCAAAATCCCTTTGTTCTAGATAATGGCTaGGCTGATTTATTTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: NLPYPTYSCSEEVFQNPFVLDNG*ADLFEV Trigger: TACCTCAAATAAATCAGCCCAGCCATTATCTAGAAC...AAAGGGATTTTGGAAAACTTCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR CCA 72 bp | ATTGCTACAAGCCTCACCACGGAGCTCACAAAAAGTTaGAAGACTAGAGCCCCACTCCTCAGAAAGTCAGCG | + |
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Preference number: 3 (lower is better) Translates to: IATSLTTELTKS*KTRAPLLRKSA Trigger: CGCTGACTTTCTGAGGAGTGGGGCTCTAGTCTTCCAACTTTTTGTGAGCTCCGTGGTGAGGCTTGTAGCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR TCA 72 bp | CGACGTGATGGGTTCCAGCACATTTTATGCATGAAATaGCTCTTGTCTGTAGGGAATGGAATGGAGTACATG | + |
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Preference number: 3 (lower is better) Translates to: RRDGFQHILCMK*LLSVGNGMEYM Trigger: CATGTACTCCATTCCATTCCCTACAGACAAGAGTCATTTCATGCATAAAATGTGCTGGAACCCATCACGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR TCA 72 bp | GTGTATATACATGATATCATACATAGAGAGATGAAATaGCCCAGGTTGATTTTAGGAAATTCCCCATTCCCC | + |
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Preference number: 3 (lower is better) Translates to: VYIHDIIHREMK*PRLILGNSPFP Trigger: GGGGAATGGGGAATTTCCTAAAATCAACCTGGGTCATTTCATCTCTCTATGTATGATATCATGTATATACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR TCA 72 bp | AATTACAAAGTCTTCCAGCTTCTGTGTCTTGCCTACTaGTCACTAACTCAAATCCAGTTCCACATTTTACTT | + |
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Preference number: 3 (lower is better) Translates to: NYKVFQLLCLAY*SLTQIQFHILL Trigger: AAGTAAAATGTGGAACTGGATTTGAGTTAGTGATCAGTAGGCAAGACACAGAAGCTGGAAGACTTTGTAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR CCA 72 bp | CATTTTATGCATGAAATGACTCTTGTCTGTAGGGAATaGAATGGAGTACATGTGATTATTTCCTTACTTTGG | + |
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Preference number: 3 (lower is better) Translates to: HFMHEMTLVCRE*NGVHVIISLLW Trigger: CCAAAGTAAGGAAATAATCACATGTACTCCATTCCATTCCCTACAGACAAGAGTCATTTCATGCATAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGCAGATTTTACATTaGTGCTGCGGCCATCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: THHTSHHPRTFPTLLTHAQQILH*CCGHPP Trigger: CGGGGGATGGCCGCAGCATCAATGTAAAATCTGCTG...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCTGGTGAAAAGGGCCTaGGTCTGTGAGGCAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: THHTSHHPRTFPTLLTHALVKRA*VCEANP Trigger: TGGGTTTGCCTCACAGACCCAGGCCCTTTTCACCAG...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGACAGCACTGGGCATCCTaGAGGGGTCCTGATGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRQHWAS*RGPDES Trigger: ACTCTCATCAGGACCCCTCCAGGATGCCCAGTGCTG...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACAAGGGCCTGGGTCTGTaGGGCAAACCCAAAATAGAC | + |
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Preference number: 4 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHKGLGL*GKPKID Trigger: GTCTATTTTGGGTTTGCCTCACAGACCCAGGCCCTT...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCCCATTGGGAGAGGCTaGGTATCCCTTTCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: THHTSHHPRTFPTLLTHAPIGRG*VSLSCL Trigger: GAGACAAGAAAGGGATACCCAGCCTCTCCCAATGGG...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGCAAGAGGTGGGCTCTaGGTAGTCAGAGGAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRARGGL*VVRGVL Trigger: AAGGACTCCTCTGACTACCCAGAGCCCACCTCTTGC...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTTATAATCTCCAGCACTaGGCATCCTGGAGGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: THHTSHHPRTFPTLLTHAYNLQH*ASWRGP Trigger: AGGACCCCTCCAGGATGCCCAGTGCTGGAGATTATA...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTCCTTTCTTGTCTCTTTaGCCTCTCCAGCCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPPFLSL*PLQPGT Trigger: TGTCCCTGGCTGGAGAGGCCAAAGAGACAAGAAAGG...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTAGGTGTACCAGGGTCTaGACTATGGCATGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPRCTRV*TMAWLV Trigger: CACCAACCATGCCATAGTCCAGACCCTGGTACACCT...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTAATGGCTGTTTTGACTaGGGCCCATGTCTTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPNGCFD*GPCLPT Trigger: TGTGGGAAGACATGGGCCTCAGTCAAAACAGCCATT...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTCATGAATGGCTGTTTTaGCTGAGGCCCATGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPHEWLF*LRPMSS Trigger: GGAAGACATGGGCCTCAGTCAAAACAGCCATTCATG...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACAATCCGGAATTCTGCTaGTGTCACTGCTTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHNPEFC*CHCFSM Trigger: CATGGAGAAGCAGTGACAGCAGCAGAATTCCGGATT...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGATTTCCGTTTGCTGGCTaGTCTCACGGATCGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRFPFAG*SHGSKK Trigger: CTTCTTCGATCCGTGAGAGCAGCCAGCAAACGGAAA...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | CGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCTTTGATTTTTCCGTTTaGTGGCTGCTCTCACGGATC | + |
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Preference number: 4 (lower is better) Translates to: RTTLHTTPEPSLPYLLMLFDFSV*WLLSRI Trigger: GATCCGTGAGAGCAGCCAGCAAACGGAAAAATCAAA...GAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | ACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGGAAGCATACCCTTCTGGTaGTATGATCCAGTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TLHTTPEPSLPYLLMLRGSIPFW*YDPVLP Trigger: TGGCAGGACTGGATCATAGCACCAGAAGGGTATGCT...TCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCCGTCACAATAAAATaGAGCATACCCTTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHPVTIK*SIPFWC Trigger: GCACCAGAAGGGTATGCTGCATTTTATTGTGACGGG...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTGATTTTTCCGTTTGCTaGCTGCTCTCACGGATCGAA | + |
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Preference number: 4 (lower is better) Translates to: THHTSHHPRTFPTLLTHADFSVC*LLSRIE Trigger: TTCGATCCGTGAGAGCAGCCAGCAAACGGAAAAATC...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | ACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGGATTCTGCTGCTGTCACTaGTTCTCCATGTGGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: TLHTTPEPSLPYLLMLRGFCCCH*FSMWNL Trigger: CAGATTCCACATGGAGAAGCAGTGACAGCAGCAGAA...TCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACATAAATCCGGAATTCTaGTGCTGTCACTGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTPQKVSVGWRKTLVTSHINPEF*CCHCFS Trigger: GGAGAAGCAGTGACAGCAGCAGAATTCCGGATTTAT...GTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTAAGAAGTACCTCGCTTaGCTTGAAGAAGGCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPKKYLA*LEEGHH Trigger: ATGGTGGCCTTCTTCAAGGCAAGCGAGGTACTTCTT...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | CGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGTTCGTGCTTCTTaGAGGCTTGTTTTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RTTLHTTPEPSLPYLLMLRVRAS*RLVFVH Trigger: GTGAACAAAAACAAGCCTGCAAGAAGCACGAACTCT...GAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGGAGGACTATGGCATGGTTaGTGGCATTCATATGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TLHTTPEPSLPYLLMLRGGLWHG*WHSYGH Trigger: ATGCCCATATGAATGCCACCAACCATGCCATAGTCC...TCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGACAAGGCTTGGGAACATaGTCTGGAAACATCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRQGLGT*SGNIRC Trigger: ACACCTGATGTTTCCAGACCATGTTCCCAAGCCTTG...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGATCTCCATGTGGAATCTaGGTCAGATCAAACCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRSPCGI*VRSNRN Trigger: GTTTCGGTTTGATCTGACCCAGATTCCACATGGAGA...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTCACTGCTTCTCCATGTaGAATCTGGGTCAGATCAAA | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPHCFSM*NLGQIK Trigger: TTTGATCTGACCCAGATTCCACATGGAGAAGCAGTG...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTGGATTAATCACCCAGTaGTTGCTGGTCACAGTGATA | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPGLITQ*LLVTVI Trigger: TATCACTGTGACCAGCAACCACTGGGTGATTAATCC...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCATATGGGCATTAAGTaGAAAAGAACATTCCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: THHTSHHPRTFPTLLTHAHMGIK*KRTFPV Trigger: GACGGGGAATGTTCTTTTCCACTTAATGCCCATATG...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR CAA 72 bp | GGGGAGTTGGGAATGGCGCTCCATGAATATTTTCAGTaGATTGCTACAAGCCTCACCACGGAGCTCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: GELGMALHEYFQ*IATSLTTELTK Trigger: TTTTGTGAGCTCCGTGGTGAGGCTTGTAGCAATCAACTGAAAATATTCATGGAGCGCCATTCCCAACTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | AACCTTCCCTACCCTACTTACTCATGCTCAGAGGAAGTTTTCCAAAATCCCTTTACCCTTCTGGTGCTATaGTCCAGTCCTGCCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NLPYPTYSCSEEVFQNPFTLLVL*SSPAIP Trigger: TGGGATGGCAGGACTGGATCATAGCACCAGAAGGGT...AAAGGGATTTTGGAAAACTTCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | TATATTAGCCTTGGGAAAAATGTTAGCATAGTGTTAAACTGGACCCACCACACCTGCTTGTTTCCCTGGTaGAAAGGGCCTGGGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: YISLGKNVSIVLNWTHHTCLFPW*KGPGSV Trigger: CACAGACCCAGGCCCTTTTCACCAGGGAAACAAGCA...GGTGTGGTGGGTCCAGTTTAACACTATGCTAACATTTTTCCCAAGGCTAATATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR TCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTGATTTATTGCGGTTTTaGTTTTTCCGTTTGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPDLLRF*FFRLLA Trigger: AGCCAGCAAACGGAAAAATCAAAACCGCAATAAATC...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTTTGGTGGCATTCATATaGGCATTAAGTGGAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPLVAFI*ALSGKE Trigger: TTCTTTTCCACTTAATGCCCATATGAATGCCACCAA...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| 3UTR CAA 72 bp | AAGCCACAATGTCTGAAAGTTAGTAAGGATGGATTCTaGCTTGAAAGCTACAAGCGGGGAGTTGGGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: KPQCLKVSKDGF*LESYKRGVGNG Trigger: GCCATTCCCAACTCCCCGCTTGTAGCTTTCAAGCAAGAATCCATCCTTACTAACTTTCAGACATTGTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR GCA 90 bp | TATATTAGCCTTGGGAAAAATGTTAGCATAGTGTTAAACTGGACCCACCACACCGCTATGATCCAGTCCTaGCATCCCAGATCTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: YISLGKNVSIVLNWTHHTAMIQS*HPRSRK Trigger: TTTCCGAGATCTGGGATGGCAGGACTGGATCATAGC...GGTGTGGTGGGTCCAGTTTAACACTATGCTAACATTTTTCCCAAGGCTAATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | AACTGGACCCACCACACCCCAACAAAAGTTAGAATAGGAATCTATTATATAATAGATGCGCATACCCATTaGGAGAGGCTGGGTATCCCT | + |
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Preference number: 4 (lower is better) Translates to: NWTHHTPTKVRIGIYYIIDAHTH*ERLGIP Trigger: AGGGATACCCAGCCTCTCCCAATGGGTATGCGCATC...TATTATATAATAGATTCCTATTCTAACTTTTGTTGGGGTGTGGTGGGTCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | AACTGGACCCACCACACCCCAACAAAAGTTAGAATAGGAATCTATTATATAATATGGTATCATGTAGGCTaGCAAGAGGTGGGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NWTHHTPTKVRIGIYYIIWYHVG*QEVGSG Trigger: CCCAGAGCCCACCTCTTGCCAGCCTACATGATACCA...TATTATATAATAGATTCCTATTCTAACTTTTGTTGGGGTGTGGTGGGTCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | AACCTTCCCTACCCTACTTACTCATGCTCAGAGGAAGTTTTCCAAAATCCCTTTGCCCAAATTGTTCTGTaGATTAATCACCCAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NLPYPTYSCSEEVFQNPFAQIVL*INHPVV Trigger: AACCACTGGGTGATTAATCCACAGAACAATTTGGGC...AAAGGGATTTTGGAAAACTTCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | TATATTAGCCTTGGGAAAAATGTTAGCATAGTGTTAAACTGGACCCACCACACCCATCATTCAGAAAGTTaGTATCATGTAGGCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: YISLGKNVSIVLNWTHHTHHSES*YHVGWQ Trigger: TTGCCAGCCTACATGATACCAACTTTCTGAATGATG...GGTGTGGTGGGTCCAGTTTAACACTATGCTAACATTTTTCCCAAGGCTAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | TATATTAGCCTTGGGAAAAATGTTAGCATAGTGTTAAACTGGACCCACCACACCCTTGTTTTTGTTCACTaGTATTATAATCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: YISLGKNVSIVLNWTHHTLVFVH*YYNLQH Trigger: GTGCTGGAGATTATAATACCAGTGAACAAAAACAAG...GGTGTGGTGGGTCCAGTTTAACACTATGCTAACATTTTTCCCAAGGCTAATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CCA 90 bp | AACTGGACCCACCACACCCCAACAAAAGTTAGAATAGGAATCTATTATATAATAAATACAGGACCGAGATaGCATTTAGTTTGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NWTHHTPTKVRIGIYYIINTGPR*HLVWLE Trigger: CTCCAACCAAACTAAATGCCATCTCGGTCCTGTATT...TATTATATAATAGATTCCTATTCTAACTTTTGTTGGGGTGTGGTGGGTCCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 90 bp | GCAAGAGGTGGGCTCTGGGTAGTCAGAGGAGTCCTTGGTGGTAAGTaGAGACGATGCGCATACCCATTGGGAGAGGCTGGGTATCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ARGGLWVVRGVLGGK*RRCAYPLGEAGYPF Trigger: AAAGGGATACCCAGCCTCTCCCAATGGGTATGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGACTACCCAGAGCCCACCTCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 90 bp | GCGCATACCCATTGGGAGAGGCTGGGTATCCCTTTCTTGTCTCTTTaGCCTCTCCAGCCAGGGACACCCTCACCAAATACTCCGACTCCT | + |
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Preference number: 5 (lower is better) Translates to: AHTHWERLGIPFLSL*PLQPGTPSPNTPTP Trigger: AGGAGTCGGAGTATTTGGTGAGGGTGTCCCTGGCTGGAGAGGCCAAAGAGACAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 90 bp | GGGCTCTGGGTAGTCAGAGGAGTCCTTGGTGGTAAGTGCAGACGATaGGCATACCCATTGGGAGAGGCTGGGTATCCCTTTCTTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GLWVVRGVLGGKCRR*AYPLGEAGYPFLVS Trigger: AGAGACAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGACTACCCAGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | ACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGGACGATGCGCATACCCATaGGGAGAGGCTGGGTATCCC | + |
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Preference number: 5 (lower is better) Translates to: TLHTTPEPSLPYLLMLRGRCAYP*GEAGYP Trigger: GGGATACCCAGCCTCTCCCAATGGGTATGCGCATCG...TCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 90 bp | TCAGAGGAGTCCTTGGTGGTAAGTGCAGACGATGCGCATACCCATTaGGAGAGGCTGGGTATCCCTTTCTTGTCTCTTTGGCCTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SEESLVVSADDAHTH*ERLGIPFLSLWPLQ Trigger: CTGGAGAGGCCAAAGAGACAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | ACGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCTCCCAAGCCTCCTTTaGCATAACCCACTTGAACCC | + |
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Preference number: 5 (lower is better) Translates to: THHTSHHPRTFPTLLTHALPSLL*HNPLEP Trigger: GGGTTCAAGTGGGTTATGCAAAAGGAGGCTTGGGAG...AGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTCAGAAAGTCAGCGTGGGCTGGAGAAAGACCTTAGTAACCAGTCACCCTCCAGCAGATTTTACATaGATGCTGCGGCCATCCCCC | + |
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Preference number: 5 (lower is better) Translates to: TPQKVSVGWRKTLVTSHPPADFT*MLRPSP Trigger: GGGGGATGGCCGCAGCATCAATGTAAAATCTGCTGG...AGGGTGACTGGTTACTAAGGTCTTTCTCCAGCCCACGCTGACTTTCTGAGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 90 bp | TCATTCAGAAAGTTGGTATCATGTAGGCTGGCAAGAGGTGGGCTCTaGGTAGTCAGAGGAGTCCTTGGTGGTAAGTGCAGACGATGCGCA | + |
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Preference number: 5 (lower is better) Translates to: SFRKLVSCRLARGGL*VVRGVLGGKCRRCA Trigger: TGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGACTACCCAGAGCCCACCTCTTGCCAGCCTACATGATACCAACTTTCTGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | CGCACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCGCATCATTCAGAAAGTaGGTATCATGTAGGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RTTLHTTPEPSLPYLLMLASFRK*VSCRLA Trigger: TGCCAGCCTACATGATACCAACTTTCTGAATGATGC...GAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 90 bp | ATAAATAAAACTGGAGTGAACGTGATTGTCTCCCAAGCCTCCTTTTaGATAACCCACTTGAACCCAGCCGCTCCAGAGGAAGCCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: INKTGVNVIVSQASF*ITHLNPAAPEEAHN Trigger: ATTGTGGGCTTCCTCTGGAGCGGCTGGGTTCAAGTGGGTTATGCAAAAGGAGGCTTGGGAGACAATCACGTTCACTCCAGTTTTATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | TATATTAGCCTTGGGAAAAATGTTAGCATAGTGTTAAACTGGACCCACCACACCCCCTTTCTTGTCTCTTaGGCCTCTCCAGCCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: YISLGKNVSIVLNWTHHTPFLVS*ASPARD Trigger: GTCCCTGGCTGGAGAGGCCAAAGAGACAAGAAAGGG...GGTGTGGTGGGTCCAGTTTAACACTATGCTAACATTTTTCCCAAGGCTAATATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | ACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGGAAGCTGTAAGCCCAAATaGTTCTGTGGATTAATCACC | + |
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Preference number: 5 (lower is better) Translates to: TLHTTPEPSLPYLLMLRGSCKPK*FCGLIT Trigger: GGTGATTAATCCACAGAACAATTTGGGCTTACAGCT...TCCTCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGAGGATTTATTGCGGTTTaGATTTTTCCGTTTGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRGFIAV*IFPFAG Trigger: GCCAGCAAACGGAAAAATCAAAACCGCAATAAATCC...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 90 bp | ATGAGAGTTGGATTTATTGCGGTTTTGATTTTTCCGTTTGCTGGCTaGTCTCACGGATCGAAGAAGTACCTCGCTTGCCTTGAAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: MRVGFIAVLIFPFAG*SHGSKKYLACLEEG Trigger: GCCTTCTTCAAGGCAAGCGAGGTACTTCTTCGATCCGTGAGAGCAGCCAGCAAACGGAAAAATCAAAACCGCAATAAATCCAACTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 90 bp | AACTCACATAGAGTTCGTGCTTCTTGCAGGCTTGTTTTTGTTCACTaGTATTATAATCTCCAGCACTGGGCATCCTGGAGGGGTCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: NSHRVRASCRLVFVH*YYNLQHWASWRGPD Trigger: ATCAGGACCCCTCCAGGATGCCCAGTGCTGGAGATTATAATACCAGTGAACAAAAACAAGCCTGCAAGAAGCACGAACTCTATGTGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | ACCACACTTCACACCACCCCAGAACCTTCCCTACCCTACTTACTCATGCTCAGATCTCTTTCAACTAAGTaGACAAAGCTCATGACCATG | + |
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Preference number: 5 (lower is better) Translates to: TTLHTTPEPSLPYLLMLRSLSTK*TKLMTM Trigger: CATGGTCATGAGCTTTGTCAACTTAGTTGAAAGAGA...TCTGAGCATGAGTAAGTAGGGTAGGGAAGGTTCTGGGGTGGTGTGAAGTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | AACTGGACCCACCACACCCCAACAAAAGTTAGAATAGGAATCTATTATATAATATTAATCACCCAGTGGTaGCTGGTCACAGTGATATCA | + |
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Preference number: 5 (lower is better) Translates to: NWTHHTPTKVRIGIYYIILITQW*LVTVIS Trigger: TGATATCACTGTGACCAGCAACCACTGGGTGATTAA...TATTATATAATAGATTCCTATTCTAACTTTTGTTGGGGTGTGGTGGGTCCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS-3UTR CAA 90 bp | TATATTAGCCTTGGGAAAAATGTTAGCATAGTGTTAAACTGGACCCACCACACCCTTGCAGGCTTGTTTTaGTTCACTGGTATTATAATC | + |
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Preference number: 5 (lower is better) Translates to: YISLGKNVSIVLNWTHHTLAGLF*FTGIII Trigger: GATTATAATACCAGTGAACAAAAACAAGCCTGCAAG...GGTGTGGTGGGTCCAGTTTAACACTATGCTAACATTTTTCCCAAGGCTAATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 72 bp | GGGCTCTGGGTAGTCAGAGGAGTCCTTGGTGGTAAGTaGAGACGATGCGCATACCCATTGGGAGAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLWVVRGVLGGK*RRCAYPLGEAG Trigger: CCCAGCCTCTCCCAATGGGTATGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGACTACCCAGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CAA 90 bp | TGCGCATACCCATTGGGAGAGGCTGGGTATCCCTTTCTTGTCTCTTaGGCCTCTCCAGCCAGGGACACCCTCACCAAATACTCCGACTCC | + |
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Preference number: 6 (lower is better) Translates to: CAYPLGEAGYPFLVS*ASPARDTLTKYSDS Trigger: GGAGTCGGAGTATTTGGTGAGGGTGTCCCTGGCTGGAGAGGCCAAAGAGACAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CAA 90 bp | GTCAGAGGAGTCCTTGGTGGTAAGTGCAGACGATGCGCATACCCATaGGGAGAGGCTGGGTATCCCTTTCTTGTCTCTTTGGCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VRGVLGGKCRRCAYP*GEAGYPFLVSLASP Trigger: TGGAGAGGCCAAAGAGACAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 72 bp | GTAGTCAGAGGAGTCCTTGGTGGTAAGTGCAGACGATaGGCATACCCATTGGGAGAGGCTGGGTATCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VVRGVLGGKCRR*AYPLGEAGYPF Trigger: AAAGGGATACCCAGCCTCTCCCAATGGGTATGCGCATCGTCTGCACTTACCACCAAGGACTCCTCTGACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | TTTGGTTGGAGCGCAGCAAGGCTTGGGAACATGGTCTaGAAACATCAGGTGTACCAGGGTCTGGACTATGGC | + |
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Preference number: 6 (lower is better) Translates to: FGWSAARLGNMV*KHQVYQGLDYG Trigger: GCCATAGTCCAGACCCTGGTACACCTGATGTTTCCAGACCATGTTCCCAAGCCTTGCTGCGCTCCAACCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CAA 72 bp | GTGATTGTCTCCCAAGCCTCCTTTTGCATAACCCACTaGAACCCAGCCGCTCCAGAGGAAGCCCACAATACC | + |
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Preference number: 6 (lower is better) Translates to: VIVSQASFCITH*NPAAPEEAHNT Trigger: GGTATTGTGGGCTTCCTCTGGAGCGGCTGGGTTCAAGTGGGTTATGCAAAAGGAGGCTTGGGAGACAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | AAGTTGGTATCATGTAGGCTGGCAAGAGGTGGGCTCTaGGTAGTCAGAGGAGTCCTTGGTGGTAAGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KLVSCRLARGGL*VVRGVLGGKCR Trigger: TCTGCACTTACCACCAAGGACTCCTCTGACTACCCAGAGCCCACCTCTTGCCAGCCTACATGATACCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | TTTAGTTTGGTTGGAGCGCAGCAAGGCTTGGGAACATaGTCTGGAAACATCAGGTGTACCAGGGTCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: FSLVGAQQGLGT*SGNIRCTRVWT Trigger: AGTCCAGACCCTGGTACACCTGATGTTTCCAGACCATGTTCCCAAGCCTTGCTGCGCTCCAACCAAACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CAA 90 bp | GGGCATCCTGGAGGGGTCCTGATGAGAGTTGGATTTATTGCGGTTTaGATTTTTCCGTTTGCTGGCTGCTCTCACGGATCGAAGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: GHPGGVLMRVGFIAV*IFPFAGCSHGSKKY Trigger: GTACTTCTTCGATCCGTGAGAGCAGCCAGCAAACGGAAAAATCAAAACCGCAATAAATCCAACTCTCATCAGGACCCCTCCAGGATGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS TCA 72 bp | GATGCTTGTTTCCCTGGTGAAAAGGGCCTGGGTCTGTaGGGCAAACCCAAAATAGACAGAATTTCCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DACFPGEKGLGL*GKPKIDRISLC Trigger: ACAGAGGGAAATTCTGTCTATTTTGGGTTTGCCTCACAGACCCAGGCCCTTTTCACCAGGGAAACAAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 72 bp | GGATTTATTGCGGTTTTGATTTTTCCGTTTGCTGGCTaGTCTCACGGATCGAAGAAGTACCTCGCTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFIAVLIFPFAG*SHGSKKYLACL Trigger: AAGGCAAGCGAGGTACTTCTTCGATCCGTGAGAGCAGCCAGCAAACGGAAAAATCAAAACCGCAATAAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS GCA 72 bp | GAGAGTTGGATTTATTGCGGTTTTGATTTTTCCGTTTaGTGGCTGCTCTCACGGATCGAAGAAGTACCTCGC | + |
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Preference number: 6 (lower is better) Translates to: ESWIYCGFDFSV*WLLSRIEEVPR Trigger: GCGAGGTACTTCTTCGATCCGTGAGAGCAGCCAGCAAACGGAAAAATCAAAACCGCAATAAATCCAACTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | AGAGTTCGTGCTTCTTGCAGGCTTGTTTTTGTTCACTaGTATTATAATCTCCAGCACTGGGCATCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RVRASCRLVFVH*YYNLQHWASWR Trigger: CCTCCAGGATGCCCAGTGCTGGAGATTATAATACCAGTGAACAAAAACAAGCCTGCAAGAAGCACGAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | AGTTGGATTTATTGCGGTTTTGATTTTTCCGTTTGCTaGCTGCTCTCACGGATCGAAGAAGTACCTCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWIYCGFDFSVC*LLSRIEEVPRL Trigger: CAAGCGAGGTACTTCTTCGATCCGTGAGAGCAGCCAGCAAACGGAAAAATCAAAACCGCAATAAATCCAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | CTTGTTTTTGTTCACTGGTATTATAATCTCCAGCACTaGGCATCCTGGAGGGGTCCTGATGAGAGTTGGATT | + |
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Preference number: 6 (lower is better) Translates to: LVFVHWYYNLQH*ASWRGPDESWI Trigger: AATCCAACTCTCATCAGGACCCCTCCAGGATGCCCAGTGCTGGAGATTATAATACCAGTGAACAAAAACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CCA 72 bp | TGTAAGCCCAAATTGTTCTGTGGATTAATCACCCAGTaGTTGCTGGTCACAGTGATATCAAAGACAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CKPKLFCGLITQ*LLVTVISKTSQ Trigger: CTGGCTTGTCTTTGATATCACTGTGACCAGCAACCACTGGGTGATTAATCCACAGAACAATTTGGGCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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| CDS CAA 72 bp | ACTCACATAGAGTTCGTGCTTCTTGCAGGCTTGTTTTaGTTCACTGGTATTATAATCTCCAGCACTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: THIEFVLLAGLF*FTGIIISSTGH Trigger: ATGCCCAGTGCTGGAGATTATAATACCAGTGAACAAAAACAAGCCTGCAAGAAGCACGAACTCTATGTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012281.8 |
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