Pregenerated sensors for BMP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021835Ensembl transcript IDs: ENSMUST00000074077.12, ENSMUST00000100676.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGCGCTCTTGCTAGGCTaGGGACGGCGGCGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPALLLG*GRRRSP Trigger: TGGGCTGCGCCGCCGTCCGCAGCCTAGCAAGAGCGC...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGGCGCTCTTGCTAGGCTaGGGACGGCGGCGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLALLLG*GRRRSP Trigger: TGGGCTGCGCCGCCGTCCGCAGCCTAGCAAGAGCGC...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTAGGAGCTCATGGCTCTaGCCTGAGCGGCGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPRSSWL*PERRPP Trigger: GGGAGGACGCCGCTCAGGGCAGAGCCATGAGCTCCT...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGGGGCCCTGGTCCACCTaGTCCCGAAAGAGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLGPWST*SRKSRS Trigger: GCTCCGGCTCTTTCGGGAGCAGGTGGACCAGGGCCC...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTTCCCGCAGGAGCTCATaGCTCTGCCCTGAGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPSRRSS*LCPERR Trigger: ACGCCGCTCAGGGCAGAGCCATGAGCTCCTGCGGGA...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGACGTGCTGGCCCTGGTaGGTCCGTGTCTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLTCWPW*VRVWWR Trigger: CCTCCACCAGACACGGACCCACCAGGGCCAGCACGT...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATAGGAGCTCATGGCTCTaGCCTGAGCGGCGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDRSSWL*PERRPP Trigger: GGGAGGACGCCGCTCAGGGCAGAGCCATGAGCTCCT...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTCGGCTGATTCTGACGTaGTGGCCCTGGTGGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPRLILT*WPWWVR Trigger: ACGGACCCACCAGGGCCAGCACGTCAGAATCAGCCG...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGTCCCAGTCAGGGCCCTaGTCCACCTGCTCCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLSQSGP*STCSRK Trigger: CTTTCGGGAGCAGGTGGACCAGGGCCCTGACTGGGA...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTACGTGCTGGCCCTGGTaGGTCCGTGTCTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTTCWPW*VRVWWR Trigger: CCTCCACCAGACACGGACCCACCAGGGCCAGCACGT...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATCGGCTGATTCTGACGTaGTGGCCCTGGTGGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDRLILT*WPWWVR Trigger: ACGGACCCACCAGGGCCAGCACGTCAGAATCAGCCG...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTTCCCAGTCAGGGCCCTaGTCCACCTGCTCCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTSQSGP*STCSRK Trigger: CTTTCGGGAGCAGGTGGACCAGGGCCCTGACTGGGA...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTCTGATTCTGACGTGCTaGCCCTGGTGGGTCCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPLILTC*PWWVRV Trigger: GACACGGACCCACCAGGGCCAGCACGTCAGAATCAG...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATAGGAGGGGCCGGAGTTaGGCCCAATCTCCACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDRRGRS*AQSPLP Trigger: AGGGAGTGGAGATTGGGCCCAACTCCGGCCCCTCCT...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTAGGAGGGGCCGGAGTTaGGCCCAATCTCCACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTRRGRS*AQSPLP Trigger: AGGGAGTGGAGATTGGGCCCAACTCCGGCCCCTCCT...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTCTGCGGGTCAAGGTATaGCCCCGGCCATCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTLRVKV*PRPSWP Trigger: TGGCCATGATGGCCGGGGCCATACCTTGACCCGCAG...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATCTGCGGGTCAAGGTATaGCCCCGGCCATCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDLRVKV*PRPSWP Trigger: TGGCCATGATGGCCGGGGCCATACCTTGACCCGCAG...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATCGTGTCTGGTGGAGGTaGGTCACCTCAATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDRVWWR*VTSMAS Trigger: GCTGGCCATTGAGGTGACTCACCTCCACCAGACACG...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTCATCATGGCCAAAAGTaGCCAGGAGGGGCCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPHHGQK*PGGAGV Trigger: AACTCCGGCCCCTCCTGGTCACTTTTGGCCATGATG...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATTCAAGCCCGGTTCCCTaGCTCTGCTCTTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDSSPVP*LCSSSS Trigger: GGAGGAGGAAGAGCAGAGCCAGGGAACCGGGCTTGA...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTTCAAGCCCGGTTCCCTaGCTCTGCTCTTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTSSPVP*LCSSSS Trigger: GGAGGAGGAAGAGCAGAGCCAGGGAACCGGGCTTGA...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCTGATTCTGACGTGCTaGCCCTGGTGGGTCCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLLILTC*PWWVRV Trigger: GACACGGACCCACCAGGGCCAGCACGTCAGAATCAG...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTTGGCCCCGGCCATCATaGCCAAAAGTGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTWPRPS*PKVTRR Trigger: CCTCCTGGTCACTTTTGGCCATGATGGCCGGGGCCA...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGTGGCCCCGGCCATCATaGCCAAAAGTGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLWPRPS*PKVTRR Trigger: CCTCCTGGTCACTTTTGGCCATGATGGCCGGGGCCA...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGGTCCAGCGAAGGACTaGAGGGCTCACATCGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLGPAKD*RAHIES Trigger: ACTTTCGATGTGAGCCCTGCAGTCCTTCGCTGGACC...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGTATCAAACTAGCATaGCTCGCGCCTCCTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPGIKLA*LAPPSR Trigger: CCTGCTAGGAGGCGCGAGCCATGCTAGTTTGATACC...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGGTATCAAACTAGCATaGCTCGCGCCTCCTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLGIKLA*LAPPSR Trigger: CCTGCTAGGAGGCGCGAGCCATGCTAGTTTGATACC...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGGCCTGGTAGCCGGGTaGGGCCACAATCCAATCATT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTGLVAG*GHNPII Trigger: AATGATTGGATTGTGGCCCCACCCGGCTACCAGGCC...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGGGTCCAGCGAAGGACTaGAGGGCTCACATCGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLGPAKD*RAHIES Trigger: ACTTTCGATGTGAGCCCTGCAGTCCTTCGCTGGACC...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGCTCTCACTGGTCCCTaGGATGTTCTCCAGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPALTGP*DVLQMF Trigger: GAACATCTGGAGAACATCCCAGGGACCAGTGAGAGC...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGGCTGTGGGTGATGCTTaGGACTACGTTTGGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLAVGDA*DYVWPF Trigger: GAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGC...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATCACCGTGTCACATTGTaGTGGACTAGTCTGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDHRVTL*WTSLVS Trigger: GGACACCAGACTAGTCCATCACAATGTGACACGGTG...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCACCGTGTCACATTGTaGTGGACTAGTCTGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLHRVTL*WTSLVS Trigger: GGACACCAGACTAGTCCATCACAATGTGACACGGTG...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGCAATCTCCACTCCCTTaGGGTAACGATCGGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLQSPLP*GNDRLI Trigger: AATCAGCCGATCGTTACCTCAAGGGAGTGGAGATTG...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGCATGGTTGGTTGAGTTaGGGTGATCAGCCAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLHGWLS*GDQPVE Trigger: TTCCACTGGCTGATCACCTCAACTCAACCAACCATG...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGAAAGAGCCGGAGCTCTaGCGAGGAGATCACCTCATT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLKEPEL*RGDHLI Trigger: AATGAGGTGATCTCCTCGGCAGAGCTCCGGCTCTTT...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGGTGAGTCACCTCAATaGCCAGCCCATAATTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLGESPQ*PAHNWV Trigger: AACCCAATTATGGGCTGGCCATTGAGGTGACTCACC...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCAATCTCCACTCCCTTaGGGTAACGATCGGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLQSPLP*GNDRLI Trigger: AATCAGCCGATCGTTACCTCAAGGGAGTGGAGATTG...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATTCCAGCCCACGTCACTaGAGTCCACGTATAGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDSSPRH*SPRIVN Trigger: ATTCACTATACGTGGACTTCAGTGACGTGGGCTGGA...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGTCCAGCCCACGTCACTaGAGTCCACGTATAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLSSPRH*SPRIVN Trigger: ATTCACTATACGTGGACTTCAGTGACGTGGGCTGGA...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATTTGGTTGAGTTGAGGTaGTCAGCCAGTGGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDLVELR*SASGKG Trigger: TCCCTTTCCACTGGCTGATCACCTCAACTCAACCAA...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGTTGGTTGAGTTGAGGTaGTCAGCCAGTGGAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLLVELR*SASGKG Trigger: TCCCTTTCCACTGGCTGATCACCTCAACTCAACCAA...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCATGGTTGGTTGAGTTaGGGTGATCAGCCAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLHGWLS*GDQPVE Trigger: TTCCACTGGCTGATCACCTCAACTCAACCAACCATG...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGAATGGCATGGTTGGTTaGGTTGAGGTGATCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLNGMVG*VEVISQ Trigger: CTGGCTGATCACCTCAACTCAACCAACCATGCCATT...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTAATGGCATGGTTGGTTaGGTTGAGGTGATCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTNGMVG*VEVISQ Trigger: CTGGCTGATCACCTCAACTCAACCAACCATGCCATT...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGAGTTGACTAGGGTCTaGACAATGGCATGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLELTRV*TMAWLV Trigger: AACCAACCATGCCATTGTGCAGACCCTAGTCAACTC...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATGGTGAGTCACCTCAATaGCCAGCCCATAATTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDGESPQ*PAHNWV Trigger: AACCCAATTATGGGCTGGCCATTGAGGTGACTCACC...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGTCTTATTCTTCTTCCTaGACCGCTGTGGGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLSYSSS*TAVGDA Trigger: AGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGA...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGTACAACATGGAAATaGCACTCAGTTCAGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPGTTWK*HSVQWG Trigger: TCCCCACTGAACTGAGTGCCATTTCCATGTTGTACC...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATGAGTTGACTAGGGTCTaGACAATGGCATGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDELTRV*TMAWLV Trigger: AACCAACCATGCCATTGTGCAGACCCTAGTCAACTC...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTTCTTATTCTTCTTCCTaGACCGCTGTGGGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTSYSSS*TAVGDA Trigger: AGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGA...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTTCCACGTATAGTGAATaGCGACGGCAGTTCTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPSTYSE*RRQFLF Trigger: GAATAAGAACTGCCGTCGCCATTCACTATACGTGGA...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGGGTACAACATGGAAATaGCACTCAGTTCAGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLGTTWK*HSVQWG Trigger: TCCCCACTGAACTGAGTGCCATTTCCATGTTGTACC...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGCATCCAGGTACAACATaGAAATGGCACTCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLHPGTT*KWHSVQ Trigger: CTGAACTGAGTGCCATTTCCATGTTGTACCTGGATG...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTCATCCAGGTACAACATaGAAATGGCACTCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCPPSGLPHPGTT*KWHSVQ Trigger: CTGAACTGAGTGCCATTTCCATGTTGTACCTGGATG...AGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATCCTCCTAGCAGGACTTaGCATAATAAAACGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDPPSRT*HNKTTI Trigger: GATGGTCGTTTTATTATGCCAAGTCCTGCTAGGAGG...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTCCTCCTAGCAGGACTTaGCATAATAAAACGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTPPSRT*HNKTTI Trigger: GATGGTCGTTTTATTATGCCAAGTCCTGCTAGGAGG...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTAGGAACCATTTCTGCTaGGGGCTTCATAACCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVSALWTRNHFC*GLHNLI Trigger: TATGAGGTTATGAAGCCCCCAGCAGAAATGGTTCCT...AGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGAGGAACCATTTCTGCTaGGGGCTTCATAACCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLRNHFC*GLHNLI Trigger: TATGAGGTTATGAAGCCCCCAGCAGAAATGGTTCCT...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGTCCACGTATAGTGAATaGCGACGGCAGTTCTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLSTYSE*RRQFLF Trigger: GAATAAGAACTGCCGTCGCCATTCACTATACGTGGA...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGGAATGACGGCGCTCTaGCTAGGCTGCGGACGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLGMTAL*LGCGRR Trigger: CCGCCGTCCGCAGCCTAGCAAGAGCGCCGTCATTCC...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS TCA 90 bp | AAAGTGACCAGGAGGGGCCGGAGTTGGGCCCAATCTCCACTCCCTTaGGGTAACGATCGGCTGATTCTGACGTGCTGGCCCTGGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVTRRGRSWAQSPLP*GNDRLILTCWPWWV Trigger: GACCCACCAGGGCCAGCACGTCAGAATCAGCCGATCGTTACCTCAAGGGAGTGGAGATTGGGCCCAACTCCGGCCCCTCCTGGTCACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | CCAGATGTTCTTCGTGATGGAAACTCCTCACAGTGTTGGCTCGGCTaGCGGGACGCTCCGGGTACTCAAGCCCGGTTCCCTGGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDVLRDGNSSQCWLG*RDAPGTQARFPGSA Trigger: AGCAGAGCCAGGGAACCGGGCTTGAGTACCCGGAGCGTCCCGCCAGCCGAGCCAACACTGTGAGGAGTTTCCATCACGAAGAACATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | GCTGGCCCTGGTGGGTCCGTGTCTGGTGGAGGTGAGTCACCTCAATaGCCAGCCCATAATTGGGTTGCTTTTCCCGGGTCCAGCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGPGGSVSGGGESPQ*PAHNWVAFPGSSEG Trigger: TCCTTCGCTGGACCCGGGAAAAGCAACCCAATTATGGGCTGGCCATTGAGGTGACTCACCTCCACCAGACACGGACCCACCAGGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATGGAATGACGGCGCTCTaGCTAGGCTGCGGACGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDGMTAL*LGCGRR Trigger: CCGCCGTCCGCAGCCTAGCAAGAGCGCCGTCATTCC...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGAAACTCCTCACAGTGTaGGCTCGGCTGGCGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLKLLTV*ARLAGR Trigger: GCGTCCCGCCAGCCGAGCCAACACTGTGAGGAGTTT...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | GGATGTTCTCCAGATGTTCTTCGTGATGGAAACTCCTCACAGTGTTaGCTCGGCTGGCGGGACGCTCCGGGTACTCAAGCCCGGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCSPDVLRDGNSSQC*LGWRDAPGTQARFP Trigger: AGGGAACCGGGCTTGAGTACCCGGAGCGTCCCGCCAGCCGAGCCAACACTGTGAGGAGTTTCCATCACGAAGAACATCTGGAGAACATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | GACGGCAGTTCTTATTCTTCTTCCTGGACCGCTGTGGGTGATGCTTaGGACTACGTTTGGCCCTTCTGCGGGTCAAGGTATGGCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGSSYSSSWTAVGDA*DYVWPFCGSRYGPG Trigger: GCCGGGGCCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGAACTGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGAAACTCCTCACAGTGTaGGCTCGGCTGGCGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCPPSGLKLLTV*ARLAGR Trigger: GCGTCCCGCCAGCCGAGCCAACACTGTGAGGAGTTT...CAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | TATTCTTCTTCCTGGACCGCTGTGGGTGATGCTTGGGACTACGTTTaGCCCTTCTGCGGGTCAAGGTATGGCCCCGGCCATCATGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YSSSWTAVGDAWDYV*PFCGSRYGPGHHGQ Trigger: TTGGCCATGATGGCCGGGGCCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGCAGCCCATAATTGGGTaGCTTTTCCCGGGTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLQPIIG*LFPGPA Trigger: CGCTGGACCCGGGAAAAGCAACCCAATTATGGGCTG...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATCAGCCCATAATTGGGTaGCTTTTCCCGGGTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDQPIIG*LFPGPA Trigger: CGCTGGACCCGGGAAAAGCAACCCAATTATGGGCTG...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS TCA 90 bp | GAATGGCGACGGCAGTTCTTATTCTTCTTCCTGGACCGCTGTGGGTaGTGCTTGGGACTACGTTTGGCCCTTCTGCGGGTCAAGGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: EWRRQFLFFFLDRCG*CLGLRLALLRVKVW Trigger: CCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGAACTGCCGTCGCCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS GCA 90 bp | GGCCAGCCCATAATTGGGTTGCTTTTCCCGGGTCCAGCGAAGGACTaGAGGGCTCACATCGAAAGTTTCCCACCGTGTCACATTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GQPIIGLLFPGPAKD*RAHIESFPPCHIVM Trigger: CATCACAATGTGACACGGTGGGAAACTTTCGATGTGAGCCCTGCAGTCCTTCGCTGGACCCGGGAAAAGCAACCCAATTATGGGCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | CTCCCGAAAGAGCCGGAGCTCTGCCGAGGAGATCACCTCATTCTCTaGGATGCTGCTGAGGTTGAAGAGGAAACGAAAAGCAGAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPKEPELCRGDHLIL*DAAEVEEETKSRAL Trigger: GAGAGCTCTGCTTTTCGTTTCCTCTTCAACCTCAGCAGCATCCCAGAGAATGAGGTGATCTCCTCGGCAGAGCTCCGGCTCTTTCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGGGGATGCTGCTGAGGTaGAAGAGGAAACGAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVRPLDCLGMLLR*KRKRKA Trigger: TGCTTTTCGTTTCCTCTTCAACCTCAGCAGCATCCC...CAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | AGTCCACGTATAGTGAATGGCGACGGCAGTTCTTATTCTTCTTCCTaGACCGCTGTGGGTGATGCTTGGGACTACGTTTGGCCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPRIVNGDGSSYSSS*TAVGDAWDYVWPFC Trigger: GCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGAACTGCCGTCGCCATTCACTATACGTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS TCA 90 bp | AGGACTGCAGGGCTCACATCGAAAGTTTCCCACCGTGTCACATTGTaGTGGACTAGTCTGGTGTCCAGTAGTCGTGTGATGAGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTAGLTSKVSHRVTL*WTSLVSSSRVMRCP Trigger: TGGACACCTCATCACACGACTACTGGACACCAGACTAGTCCATCACAATGTGACACGGTGGGAAACTTTCGATGTGAGCCCTGCAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 90 bp | GCTGAGGTTGAAGAGGAAACGAAAAGCAGAGCTCTCACTGGTCCCTaGGATGTTCTCCAGATGTTCTTCGTGATGGAAACTCCTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AEVEEETKSRALTGP*DVLQMFFVMETPHS Trigger: ACTGTGAGGAGTTTCCATCACGAAGAACATCTGGAGAACATCCCAGGGACCAGTGAGAGCTCTGCTTTTCGTTTCCTCTTCAACCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGCCCTCTGGACTGCCTGATTTTTTCAACACCACCTaGTCATACTCATCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCPPSGLPDFFNTT*SYSSRY Trigger: GTACCTGGATGAGTATGACAAGGTGGTGTTGAAAAA...ATCAGGCAGTCCAGAGGGCGGACACACACACACACACACACACACACACACACA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS TCA 72 bp | AGGAGGGGCCGGAGTTGGGCCCAATCTCCACTCCCTTaGGGTAACGATCGGCTGATTCTGACGTGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRSWAQSPLP*GNDRLILTCWP Trigger: GGGCCAGCACGTCAGAATCAGCCGATCGTTACCTCAAGGGAGTGGAGATTGGGCCCAACTCCGGCCCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS GCA 72 bp | GCCCTGGTCCACCTGCTCCCGAAAGAGCCGGAGCTCTaGCGAGGAGATCACCTCATTCTCTGGGATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALVHLLPKEPEL*RGDHLILWDAA Trigger: AGCAGCATCCCAGAGAATGAGGTGATCTCCTCGGCAGAGCTCCGGCTCTTTCGGGAGCAGGTGGACCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 72 bp | CTTCGTGATGGAAACTCCTCACAGTGTTGGCTCGGCTaGCGGGACGCTCCGGGTACTCAAGCCCGGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRDGNSSQCWLG*RDAPGTQARFP Trigger: AGGGAACCGGGCTTGAGTACCCGGAGCGTCCCGCCAGCCGAGCCAACACTGTGAGGAGTTTCCATCACGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 72 bp | TCCTGGACCGCTGTGGGTGATGCTTGGGACTACGTTTaGCCCTTCTGCGGGTCAAGGTATGGCCCCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SWTAVGDAWDYV*PFCGSRYGPGH Trigger: ATGGCCGGGGCCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS GCA 72 bp | GCTGTGGGTGATGCTTGGGACTACGTTTGGCCCTTCTaGGGGTCAAGGTATGGCCCCGGCCATCATGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AVGDAWDYVWPF*GSRYGPGHHGQ Trigger: TTGGCCATGATGGCCGGGGCCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 72 bp | CCAGATGTTCTTCGTGATGGAAACTCCTCACAGTGTTaGCTCGGCTGGCGGGACGCTCCGGGTACTCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PDVLRDGNSSQC*LGWRDAPGTQA Trigger: GGCTTGAGTACCCGGAGCGTCCCGCCAGCCGAGCCAACACTGTGAGGAGTTTCCATCACGAAGAACATCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
||
| CDS CCA 72 bp | GGTGGGTCCGTGTCTGGTGGAGGTGAGTCACCTCAATaGCCAGCCCATAATTGGGTTGCTTTTCCCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GGSVSGGGESPQ*PAHNWVAFPGS Trigger: GGACCCGGGAAAAGCAACCCAATTATGGGCTGGCCATTGAGGTGACTCACCTCCACCAGACACGGACCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | TTGGGACTACGTTTGGCCCTTCTGCGGGTCAAGGTATaGCCCCGGCCATCATGGCCAAAAGTGACCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LGLRLALLRVKV*PRPSWPKVTRR Trigger: CCTCCTGGTCACTTTTGGCCATGATGGCCGGGGCCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | GGTGGAGGTGAGTCACCTCAATGGCCAGCCCATAATTaGGTTGCTTTTCCCGGGTCCAGCGAAGGACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GGGESPQWPAHN*VAFPGSSEGLQ Trigger: CTGCAGTCCTTCGCTGGACCCGGGAAAAGCAACCCAATTATGGGCTGGCCATTGAGGTGACTCACCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CAA 72 bp | GAGGTGAGTCACCTCAATGGCCAGCCCATAATTGGGTaGCTTTTCCCGGGTCCAGCGAAGGACTGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: EVSHLNGQPIIG*LFPGPAKDCRA Trigger: AGCCCTGCAGTCCTTCGCTGGACCCGGGAAAAGCAACCCAATTATGGGCTGGCCATTGAGGTGACTCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | GCGACGGCAGTTCTTATTCTTCTTCCTGGACCGCTGTaGGTGATGCTTGGGACTACGTTTGGCCCTTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: ATAVLILLPGPL*VMLGTTFGPSA Trigger: CGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGAACTGCCGTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | GAGCCGGAGCTCTGCCGAGGAGATCACCTCATTCTCTaGGATGCTGCTGAGGTTGAAGAGGAAACGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: EPELCRGDHLIL*DAAEVEEETKS Trigger: GCTTTTCGTTTCCTCTTCAACCTCAGCAGCATCCCAGAGAATGAGGTGATCTCCTCGGCAGAGCTCCGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS GCA 72 bp | ATAATTGGGTTGCTTTTCCCGGGTCCAGCGAAGGACTaGAGGGCTCACATCGAAAGTTTCCCACCGTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: IIGLLFPGPAKD*RAHIESFPPCH Trigger: GTGACACGGTGGGAAACTTTCGATGTGAGCCCTGCAGTCCTTCGCTGGACCCGGGAAAAGCAACCCAATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | TCTTATTCTTCTTCCTGGACCGCTGTGGGTGATGCTTaGGACTACGTTTGGCCCTTCTGCGGGTCAAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SYSSSWTAVGDA*DYVWPFCGSRY Trigger: ATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS TCA 72 bp | GGGCTCACATCGAAAGTTTCCCACCGTGTCACATTGTaGTGGACTAGTCTGGTGTCCAGTAGTCGTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GLTSKVSHRVTL*WTSLVSSSRVM Trigger: CATCACACGACTACTGGACACCAGACTAGTCCATCACAATGTGACACGGTGGGAAACTTTCGATGTGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | ATAGTGAATGGCGACGGCAGTTCTTATTCTTCTTCCTaGACCGCTGTGGGTGATGCTTGGGACTACGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: IVNGDGSSYSSS*TAVGDAWDYVW Trigger: CCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGAAGAATAAGAACTGCCGTCGCCATTCACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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| CDS CCA 72 bp | ATCAAACTAGCATGGCTCGCGCCTCCTAGCAGGACTTaGCATAATAAAACGACCATCAGCATTCGGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: IKLAWLAPPSRT*HNKTTISIRLP Trigger: TGGTAACCGAATGCTGATGGTCGTTTTATTATGCCAAGTCCTGCTAGGAGGCGCGAGCCATGCTAGTTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074077.12 ENSMUST00000100676.3 |
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