Pregenerated sensors for BMP2K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034663Ensembl transcript IDs: ENSMUST00000035635.10, ENSMUST00000112974.6
Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CCAGGCTGGAGGTGTGGCTCAGCCCTAAAGCGCTTGCCTAGCGTGTaGGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACA | + |
Preference number: 1 (lower is better) Translates to: PGWRCGSALKRLPSV*EALGSVPSTAKERT Trigger: TGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCACACGCTAGGCAAGCGCTTTAGGGCTGAGCCACACCTCCAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 90 bp | AACAGGGTAGCACTGACTGCAAAGTGCACACATCTGAGAGCCAAGTaGTTTCCTAACTGCCCAGGACACACAGCCCAGGGGAGGAGCACT | + |
Preference number: 1 (lower is better) Translates to: NRVALTAKCTHLRAK*FPNCPGHTAQGRST Trigger: AGTGCTCCTCCCCTGGGCTGTGTGTCCTGGGCAGTTAGGAAATCACTTGGCTCTCAGATGTGTGCACTTTGCAGTCAGTGCTACCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR GCA 90 bp | TTTCTGTCACCACTCAGTGAAGGACACAACAAGCCATCACCATCGTaGAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACC | + |
Preference number: 1 (lower is better) Translates to: FLSPLSEGHNKPSPS*SPRFLWACSRVSQT Trigger: GGTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGGCTTGTTGTGTCCTTCACTGAGTGGTGACAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR TCA 90 bp | TCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTaGGTTTGCAGAGGAGGAGACAAGAAATATAAAAGGACCATGCCT | + |
Preference number: 1 (lower is better) Translates to: SAWHGVACSCPHYPH*VCRGGDKKYKRTMP Trigger: AGGCATGGTCCTTTTATATTTCTTGTCTCCTCCTCTGCAAACTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR GCA 90 bp | GCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTaGTGTGCTGTACTAGATCCATTTCTTCAATGCCCTAAAAGATTC | + |
Preference number: 1 (lower is better) Translates to: AWSRPFLQLHTEQPL*CAVLDPFLQCPKRF Trigger: GAATCTTTTAGGGCATTGAAGAAATGGATCTAGTACAGCACAGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 90 bp | AGTAGCAAAAGCCCTTGGAACTTTCGATTTAGGCCTCCTCCTGCTTaGAGAAGGCATCCACTTACTACCCTGTACAAACAATTCCATTTG | + |
Preference number: 1 (lower is better) Translates to: SSKSPWNFRFRPPPA*RRHPLTTLYKQFHL Trigger: CAAATGGAATTGTTTGTACAGGGTAGTAAGTGGATGCCTTCTTCAAGCAGGAGGAGGCCTAAATCGAAAGTTCCAAGGGCTTTTGCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 90 bp | GAGTGTGCAGGAAAGAGCTACAGAGCCATTAGTAAGGCAAGAGACTaGCAGTGTCTTCCCTACTTGAGCATTAACCTTCCATGTTTTGAA | + |
Preference number: 1 (lower is better) Translates to: ECAGKSYRAISKARD*QCLPYLSINLPCFE Trigger: TTCAAAACATGGAAGGTTAATGCTCAAGTAGGGAAGACACTGTCAGTCTCTTGCCTTACTAATGGCTCTGTAGCTCTTTCCTGCACACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR GCA 90 bp | CAAAAACATGGAAGTGTAATCAAAGAAAGTGCACTTAAAGCTGTTTaGCAGCAATTAAAAGGGATCTTCCAGGCTGGAGGTGTGGCTCAG | + |
Preference number: 1 (lower is better) Translates to: QKHGSVIKESALKAV*QQLKGIFQAGGVAQ Trigger: CTGAGCCACACCTCCAGCCTGGAAGATCCCTTTTAATTGCTGGCAAACAGCTTTAAGTGCACTTTCTTTGATTACACTTCCATGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 90 bp | CGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATaGCCTTTCAGTCACAAAAAGAACATAGTAAGGAAATCAGTTCTC | + |
Preference number: 1 (lower is better) Translates to: RKRKNKWLLLLLLIG*PFSHKKNIVRKSVL Trigger: GAGAACTGATTTCCTTACTATGTTCTTTTTGTGACTGAAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CCA 90 bp | TTGTCAGTGAATCACCTTAAAATATTCAGTGCATTGAAAGGCAAGTaGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTT | + |
Preference number: 1 (lower is better) Translates to: LSVNHLKIFSALKGK*NSDFIFTTQKTTSV Trigger: AACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGCCTTTCAATGCACTGAATATTTTAAGGTGATTCACTGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACACTGTCGGAGCACCCTaGAGGAACTGCAGCCCAGGA | + |
Preference number: 2 (lower is better) Translates to: QPGSAWHGVACSCPHYPHTVGAP*RNCSPG Trigger: TCCTGGGCTGCAGTTCCTTCAGGGTGCTCCGACAGT...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CAA 90 bp | AAAAGGGATCTTCCAGGCTGGAGGTGTGGCTCAGCCCTAAAGCGCTaGCCTAGCGTGTGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCA | + |
Preference number: 2 (lower is better) Translates to: KRDLPGWRCGSALKR*PSVCEALGSVPSTA Trigger: TGCGGTGCTGGGAACTGAACCCAGGGCCTCGCACACGCTAGGCAAGCGCTTTAGGGCTGAGCCACACCTCCAGCCTGGAAGATCCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACCAGCCCGGTTCTGCGTaGCATGGTGTGGCCTGCTCC | + |
Preference number: 2 (lower is better) Translates to: CEALGSVPSTAKERTSGYQPGSA*HGVACS Trigger: GGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACGTACCCAGGCCTGGATaGCCGAATGGAGAGGAGCCA | + |
Preference number: 2 (lower is better) Translates to: CEALGSVPSTAKERTSGYVPRPG*PNGEEP Trigger: TGGCTCCTCTCCATTCGGCCATCCAGGCCTGGGTAC...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | AGGTGCAAACATAGTCTCTGCCTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGCCACACTACCCCCACTaGGTTTGCAGAGGAGGAGAC | + |
Preference number: 2 (lower is better) Translates to: RCKHSLCLWHRTVSGAARPHYPH*VCRGGD Trigger: GTCTCCTCCTCTGCAAACTCAGTGGGGGTAGTGTGG...CCGGGCTGCACCACTTACTGTCCTGTGCCAAAGGCAGAGACTATGTTTGCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGAAGGACTCCCCAGTGCTaGATGAGGGTGGGGCTGGCA | + |
Preference number: 2 (lower is better) Translates to: TRAPSNNALVKYPGLDGRRTPQC*MRVGLA Trigger: TGCCAGCCCCACCCTCATCCAGCACTGGGGAGTCCT...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGCTGCGTGGCATGGTGTaGCCTGCTCCTGTCCACACT | + |
Preference number: 2 (lower is better) Translates to: MERSQSGHHLSIFHQEDELRGMV*PAPVHT Trigger: AGTGTGGACAGGAGCAGGCCACACCATGCCACGCAG...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACATCATATACATGTTTTaGGCCATACACCATAGAAGG | + |
Preference number: 2 (lower is better) Translates to: QPGSAWHGVACSCPHYPHIIYMF*AIHHRR Trigger: CCTTCTATGGTGTATGGCTCAAAACATGTATATGAT...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGGGGCCAGCTGTTGAGTaGGTGTTGGGTGCTGGTAAG | + |
Preference number: 2 (lower is better) Translates to: MERSQSGHHLSIFHQEDEGPAVE*VLGAGK Trigger: CTTACCAGCACCCAACACTCACTCAACAGCTGGCCC...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CAA 90 bp | GGGCACACCCAAATGACATTCTTTAAGCCAGAACTGGGCCAGCTGTaGAGTGAGTGTTGGGTGCTGGTAAGTGGGGGAGCCAAGTTCTTG | + |
Preference number: 2 (lower is better) Translates to: GHTQMTFFKPELGQL*SECWVLVSGGAKFL Trigger: CAAGAACTTGGCTCCCCCACTTACCAGCACCCAACACTCACTCAACAGCTGGCCCAGTTCTGGCTTAAAGAATGTCATTTGGGTGTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | CCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGAGGTGACATGTGATATCTaGAGTGATAAGCTTTCTTGT | + |
Preference number: 2 (lower is better) Translates to: PVLRGMVWPAPVHTTPTEVTCDI*SDKLSC Trigger: ACAAGAAAGCTTATCACTTCAGATATCACATGTCAC...CTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACAAAAGGACCATGCCTTaGTTATGTATTTTGCTTCTT | + |
Preference number: 2 (lower is better) Translates to: QPGSAWHGVACSCPHYPHKRTMP*LCILLL Trigger: AAGAAGCAAAATACATAACCAAGGCATGGTCCTTTT...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACTCTGGGTTCCTCACGTaGCTTCCCTTTGATGTTCAA | + |
Preference number: 2 (lower is better) Translates to: CEALGSVPSTAKERTSGYSGFLT*LPFDVQ Trigger: TTGAACATCAAAGGGAAGTCACGTGAGGAACCCAGA...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGGGAGTCTCCTCAGCTTaGGAAAATGCCTCTAACAGC | + |
Preference number: 2 (lower is better) Translates to: MERSQSGHHLSIFHQEDEGVSSA*ENASNS Trigger: GCTGTTAGAGGCATTTTCTCAAGCTGAGGAGACTCC...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTGGTAAAGCTTCTAGCTaGCAACTCTGGGTTCCTCAC | + |
Preference number: 2 (lower is better) Translates to: TLLGADLFSSYILSNLCAGKASS*QLWVPH Trigger: GTGAGGAACCCAGAGTTGTCAGCTAGAAGCTTTACC...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGGCTGTTTCCTCATGGTaGAAGCATTCATTCAGCCCC | + |
Preference number: 2 (lower is better) Translates to: MERSQSGHHLSIFHQEDEAVSSW*KHSFSP Trigger: GGGGCTGAATGAATGCTTCCACCATGAGGAAACAGC...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | GCTCAAGGGTGTCTCAGACCCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCAGTGTCTTCCCTACTTaGGCATTAACCTTCCATGTT | + |
Preference number: 2 (lower is better) Translates to: AQGCLRPTLSRTECAGKSSVFPT*ALTFHV Trigger: AACATGGAAGGTTAATGCTCAAGTAGGGAAGACACT...GCTCTTTCCTGCACACTCAGTACGAGATAGTGTGGGTCTGAGACACCCTTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR-3UTR TCA 90 bp | AACAAAGCAGCCCCTTTCTGTCACCACTCAGTGAAGGACACAACAAGCCATCACAGTAAGGCAAGAGACTaGCAGTGTCTTCCCTACTTG | + |
Preference number: 2 (lower is better) Translates to: NKAAPFCHHSVKDTTSHHSKARD*QCLPYL Trigger: CAAGTAGGGAAGACACTGTCAGTCTCTTGCCTTACT...GTGATGGCTTGTTGTGTCCTTCACTGAGTGGTGACAGAAAGGGGCTGCTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR-3UTR CCA 90 bp | ATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACGTATATGAAAGAAAGTaGCCTGTATTTTTCCCTCAA | + |
Preference number: 2 (lower is better) Translates to: ITIVQPTLSLGMLKGVSDVYERK*PVFFPQ Trigger: TTGAGGGAAAAATACAGGCCACTTTCTTTCATATAC...GTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR-3UTR TCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGAGGCAAGTGGAACTCTaGTTTCATATTCACAACTCA | + |
Preference number: 2 (lower is better) Translates to: MERSQSGHHLSIFHQEDERQVEL*FHIHNS Trigger: TGAGTTGTGAATATGAAATCAGAGTTCCACTTGCCT...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTGCCTGGATGGCCGAATaGAGAGGAGCCAGAGTGGGC | + |
Preference number: 2 (lower is better) Translates to: TEFYFKCLPATFEGLSYFAWMAE*RGARVG Trigger: GCCCACTCTGGCTCCTCTCCATTCGGCCATCCAGGC...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CAA 90 bp | CAGCTTGAGAAAATGCCTCTAACAGCAATGCAAAGGAGCTACCCATaGGACCTCCAATTAAATCATCTGTCCAATGAGCGGGTTCCAAGA | + |
Preference number: 2 (lower is better) Translates to: QLEKMPLTAMQRSYP*DLQLNHLSNERVPR Trigger: TCTTGGAACCCGCTCATTGGACAGATGATTTAATTGGAGGTCCAATGGGTAGCTCCTTTGCATTGCTGTTAGAGGCATTTTCTCAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | GGTGTCTCAGACCCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCTACAGAGCAGCTTAACAGTATATaGAAGAAAGTGGCCTGTATT | + |
Preference number: 2 (lower is better) Translates to: GVSDPHYLVLSVQERATEQLNSI*KKVACI Trigger: AATACAGGCCACTTTCTTTCATATACTGTTAAGCTG...CTCTGTAGCTCTTTCCTGCACACTCAGTACGAGATAGTGTGGGTCTGAGACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR-3UTR GCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTTGGCATGGTGTGGCCTaGTCCTGTCCACACTACCCC | + |
Preference number: 2 (lower is better) Translates to: TEFYFKCLPATFEGLSYFWHGVA*SCPHYP Trigger: GGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCA...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCATCCACTGAGGGTCTaGCTGTCCATGCAGAGTCTG | + |
Preference number: 2 (lower is better) Translates to: PQKKEQVATTPSINRMTFHPLRV*LSMQSL Trigger: CAGACTCTGCATGGACAGCCAGACCCTCAGTGGATG...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGCACGTGACTTCCCTTTaGTGTTCAAGTCTAACGGGT | + |
Preference number: 2 (lower is better) Translates to: VQGKQLNSISNVSQLHLRHVTSL*CSSLTG Trigger: ACCCGTTAGACTTGAACATCAAAGGGAAGTCACGTG...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTAGCCCACGCTTTCTCTaGGCATGCTCAAGGGTGTCT | + |
Preference number: 2 (lower is better) Translates to: HFLGPSLYMQNRDAQCICSPRFL*ACSRVS Trigger: AGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCT...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR-3UTR GCA 90 bp | CAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCAGACTGAGCAACCTCTGTaGTGTGCTGTACTAGATCCA | + |
Preference number: 2 (lower is better) Translates to: QKKEQVATTPSINRMTFQTEQPL*CAVLDP Trigger: TGGATCTAGTACAGCACAGCACAGAGGTTGCTCAGT...CTGAAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CAA 90 bp | CTGGAGGGGTTGTTGTCAGTGAATCACCTTAAAATATTCAGTGCATaGAAAGGCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAG | + |
Preference number: 2 (lower is better) Translates to: LEGLLSVNHLKIFSA*KGKWNSDFIFTTQK Trigger: CTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGCCTTTCAATGCACTGAATATTTTAAGGTGATTCACTGACAACAACCCCTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR GCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTGATCCATTTCTTCAATaGCCTAAAAGATTCTCTGGC | + |
Preference number: 2 (lower is better) Translates to: PQKKEQVATTPSINRMTFDPFLQ*PKRFSG Trigger: GCCAGAGAATCTTTTAGGGCATTGAAGAAATGGATC...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGAAACATTTTAAGCTGTaGCAGAGTTGTTTCCTAAGA | + |
Preference number: 2 (lower is better) Translates to: VQGKQLNSISNVSQLHLRKHFKL*QSCFLR Trigger: TCTTAGGAAACAACTCTGCCACAGCTTAAAATGTTT...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR GCA 90 bp | CAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCAGTTCCCAACAGTCATTTaGTATTCTCTCAGTAGATAC | + |
Preference number: 2 (lower is better) Translates to: QKKEQVATTPSINRMTFQFPTVI*YSLSRY Trigger: GTATCTACTGAGAGAATAGCAAATGACTGTTGGGAA...CTGAAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR TCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTAATAGCAATAGCTGTTaGCCTAGAAACTTCAAATGC | + |
Preference number: 2 (lower is better) Translates to: TEFYFKCLPATFEGLSYFNSNSC*PRNFKC Trigger: GCATTTGAAGTTTCTAGGTCAACAGCTATTGCTATT...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CCA 72 bp | AGGACAGTAAGTGGTGCAGCCCGGTTCTGCGTGGCATaGTGTGGCCTGCTCCTGTCCACACTACCCCCACTG | + |
Preference number: 3 (lower is better) Translates to: RTVSGAARFCVA*CGLLLSTLPPL Trigger: CAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTGCACCACTTACTGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 72 bp | GCTGTCCATGCAGAGTCTGTCACTGTCGGAGCACCCTaGAGGAACTGCAGCCCAGGACTCCCCAGTGCTGGA | + |
Preference number: 3 (lower is better) Translates to: AVHAESVTVGAP*RNCSPGLPSAG Trigger: TCCAGCACTGGGGAGTCCTGGGCTGCAGTTCCTTCAGGGTGCTCCGACAGTGACAGACTCTGCATGGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR GCA 72 bp | AGCACCCTGAAGGAACTGCAGCCCAGGACTCCCCAGTaGTGGATGAGGGTGGGGCTGGCAGAAAGTAGGTCA | + |
Preference number: 3 (lower is better) Translates to: STLKELQPRTPQ*WMRVGLAESRS Trigger: TGACCTACTTTCTGCCAGCCCCACCCTCATCCAGCACTGGGGAGTCCTGGGCTGCAGTTCCTTCAGGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR GCA 72 bp | CTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGTTCTaGGTGGCATGGTGTGGCCTGCTCCTGTCCACACTA | + |
Preference number: 3 (lower is better) Translates to: LWHRTVSGAARF*VAWCGLLLSTL Trigger: TAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTGCACCACTTACTGTCCTGTGCCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CCA 72 bp | AGTAAGTGGTGCAGCCCGGTTCTGCGTGGCATGGTGTaGCCTGCTCCTGTCCACACTACCCCCACTGAGTTT | + |
Preference number: 3 (lower is better) Translates to: SKWCSPVLRGMV*PAPVHTTPTEF Trigger: AAACTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTGCACCACTTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR GCA 72 bp | CCATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATaGTCAAGGGTGTCTCAGACCCACACTATCTCGTAC | + |
Preference number: 3 (lower is better) Translates to: PSPSCSPRFLWA*SRVSQTHTISY Trigger: GTACGAGATAGTGTGGGTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
3UTR GCA 72 bp | CCACTCAGTGAAGGACACAACAAGCCATCACCATCGTaGAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTG | + |
Preference number: 3 (lower is better) Translates to: PLSEGHNKPSPS*SPRFLWACSRV Trigger: CACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGGCTTGTTGTGTCCTTCACTGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
3UTR TCA 72 bp | AAGCTCCTAGTCCCACCACCCAGTTCTTCCATCCACTaGGGGTCTGGCTGTCCATGCAGAGTCTGTCACTGT | + |
Preference number: 3 (lower is better) Translates to: KLLVPPPSSSIH*GSGCPCRVCHC Trigger: ACAGTGACAGACTCTGCATGGACAGCCAGACCCTCAGTGGATGGAAGAACTGGGTGGTGGGACTAGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR CCA 72 bp | AACAAGCCATCACCATCGTGCAGCCCACGCTTTCTCTaGGCATGCTCAAGGGTGTCTCAGACCCACACTATC | + |
Preference number: 3 (lower is better) Translates to: NKPSPSCSPRFL*ACSRVSQTHTI Trigger: GATAGTGTGGGTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
3UTR CCA 72 bp | AGCTGTTTGCCAGCAATTAAAAGGGATCTTCCAGGCTaGAGGTGTGGCTCAGCCCTAAAGCGCTTGCCTAGC | + |
Preference number: 3 (lower is better) Translates to: SCLPAIKRDLPG*RCGSALKRLPS Trigger: GCTAGGCAAGCGCTTTAGGGCTGAGCCACACCTCCAGCCTGGAAGATCCCTTTTAATTGCTGGCAAACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR-3UTR CAA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGACTACCCCCACTGAGTTaGCAGAGGAGGAGACAAGAA | + |
Preference number: 3 (lower is better) Translates to: TRAPSNNALVKYPGLDGRLPPLS*QRRRQE Trigger: TTCTTGTCTCCTCCTCTGCAAACTCAGTGGGGGTAG...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR TCA 72 bp | CATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTaGGTTTGCAGAGGAGGAGACAAGAAATATAAAAGG | + |
Preference number: 3 (lower is better) Translates to: HGVACSCPHYPH*VCRGGDKKYKR Trigger: CCTTTTATATTTCTTGTCTCCTCCTCTGCAAACTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR-3UTR CAA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTAAGCTGGAGGGGTTGTaGTCAGTGAATCACCTTAAA | + |
Preference number: 3 (lower is better) Translates to: TLLGADLFSSYILSNLCAKLEGL*SVNHLK Trigger: TTTAAGGTGATTCACTGACAACAACCCCTCCAGCTT...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR GCA 72 bp | GAGGAGTCAGTTCCTGTTAAACAGGGTAGCACTGACTaGAAAGTGCACACATCTGAGAGCCAAGTGATTTCC | + |
Preference number: 3 (lower is better) Translates to: EESVPVKQGSTD*KVHTSESQVIS Trigger: GGAAATCACTTGGCTCTCAGATGTGTGCACTTTGCAGTCAGTGCTACCCTGTTTAACAGGAACTGACTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR-3UTR CAA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACAAAATATTCAGTGCATaGAAAGGCAAGTGGAACTCT | + |
Preference number: 3 (lower is better) Translates to: CEALGSVPSTAKERTSGYKIFSA*KGKWNS Trigger: AGAGTTCCACTTGCCTTTCAATGCACTGAATATTTT...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 72 bp | AGCCCTTGGAACTTTCGATTTAGGCCTCCTCCTGCTTaGAGAAGGCATCCACTTACTACCCTGTACAAACAA | + |
Preference number: 3 (lower is better) Translates to: SPWNFRFRPPPA*RRHPLTTLYKQ Trigger: TTGTTTGTACAGGGTAGTAAGTGGATGCCTTCTTCAAGCAGGAGGAGGCCTAAATCGAAAGTTCCAAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR TCA 72 bp | GAGGGAATTCGCTACCTAAGGCTCAGCTGTACAGAGTaGCAGTGGCAGCTGACACTGAAATTTAAATGGAGT | + |
Preference number: 3 (lower is better) Translates to: EGIRYLRLSCTE*QWQLTLKFKWS Trigger: ACTCCATTTAAATTTCAGTGTCAGCTGCCACTGTCACTCTGTACAGCTGAGCCTTAGGTAGCGAATTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
3UTR TCA 72 bp | GGAAAGAGCTACAGAGCCATTAGTAAGGCAAGAGACTaGCAGTGTCTTCCCTACTTGAGCATTAACCTTCCA | + |
Preference number: 3 (lower is better) Translates to: GKSYRAISKARD*QCLPYLSINLP Trigger: TGGAAGGTTAATGCTCAAGTAGGGAAGACACTGTCAGTCTCTTGCCTTACTAATGGCTCTGTAGCTCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
3UTR GCA 72 bp | AGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTaGTGTGCTGTACTAGATCCATTTCTTCAATGCCCT | + |
Preference number: 3 (lower is better) Translates to: RPFLQLHTEQPL*CAVLDPFLQCP Trigger: AGGGCATTGAAGAAATGGATCTAGTACAGCACAGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR-3UTR CAA 90 bp | GCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTTCGCACAAAAAGAATTTTaGACACCACCTCTAACAGTC | + |
Preference number: 3 (lower is better) Translates to: ALILQTSSNLHSSKRDHFAQKEF*TPPLTV Trigger: GACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGC...GAAATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR TCA 72 bp | CTTCTAATGTGCAACACAACACAGCTTAACAGTATATaGAAGAAAGTGGCCTGTATTTTTCCCTCAAGTGCA | + |
Preference number: 3 (lower is better) Translates to: LLMCNTTQLNSI*KKVACIFPSSA Trigger: TGCACTTGAGGGAAAAATACAGGCCACTTTCTTTCATATACTGTTAAGCTGTGTTGTGTTGCACATTAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR GCA 72 bp | TTTGCAGAGGAGGAGACAAGAAATATAAAAGGACCATaGCTTGGTTATGTATTTTGCTTCTTTCCAAGTTCT | + |
Preference number: 3 (lower is better) Translates to: FAEEETRNIKGP*LGYVFCFFPSS Trigger: AGAACTTGGAAAGAAGCAAAATACATAACCAAGGCATGGTCCTTTTATATTTCTTGTCTCCTCCTCTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CCA 72 bp | AATCACCTTAAAATATTCAGTGCATTGAAAGGCAAGTaGAACTCTGATTTCATATTCACAACTCAGAAGACC | + |
Preference number: 3 (lower is better) Translates to: NHLKIFSALKGK*NSDFIFTTQKT Trigger: GGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGCCTTTCAATGCACTGAATATTTTAAGGTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR TCA 72 bp | AAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATaGCCTTTCAGTCACAAAAAGAACATAGTAAGGAAA | + |
Preference number: 3 (lower is better) Translates to: KNKWLLLLLLIG*PFSHKKNIVRK Trigger: TTTCCTTACTATGTTCTTTTTGTGACTGAAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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3UTR CAA 72 bp | CTTCCAGGCTGGAGGTGTGGCTCAGCCCTAAAGCGCTaGCCTAGCGTGTGCGAGGCCCTGGGTTCAGTTCCC | + |
Preference number: 4 (lower is better) Translates to: LPGWRCGSALKR*PSVCEALGSVP Trigger: GGGAACTGAACCCAGGGCCTCGCACACGCTAGGCAAGCGCTTTAGGGCTGAGCCACACCTCCAGCCTGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGGGTTTGTGGTTGCTaGACTCCCCAGGAGCAGGGA | + |
Preference number: 4 (lower is better) Translates to: QPGSAWHGVACSCPHYPHWVCGC*TPQEQG Trigger: TCCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCA...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGTGCTGTGCTGGCTGCTaGTGGCGAGCTAGCATCTGC | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSECCAGC*WRASIC Trigger: GCAGATGCTAGCTCGCCATCAGCAGCCAGCACAGCA...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGGACTCTATGCTGCTGTaGGGGTTGCTGAGGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSEDSMLL*GLLRGS Trigger: GGACCCCCTCAGCAACCCCCACAGCAGCATAGAGTC...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | CCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGAGTGCTCTGGGAGTCTCTaGGGCCCACCTTCTTGTGTC | + |
Preference number: 4 (lower is better) Translates to: PVLRGMVWPAPVHTTPTECSGSL*GPPSCV Trigger: GACACAAGAAGGTGGGCCGCAGAGACTCCCAGAGCA...CTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGAGAACTCATTGCTGCTCTaGGAGTCTCTGCGGCCCACC | + |
Preference number: 4 (lower is better) Translates to: PVLRGMVWPAPVHTTPTENSLLL*ESLRPT Trigger: GGTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTT...CTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACGGGACTGTTGTGGAGTaGCACTTTGCACCACGAGTT | + |
Preference number: 4 (lower is better) Translates to: QPGSAWHGVACSCPHYPHGTVVE*HFAPRV Trigger: AACTCGTGGTGCAAAGTGTCACTCCACAACAGTCCC...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACCCACCTTCTTGTGTCTaGGGGCCCTCTCGGGCGTGC | + |
Preference number: 4 (lower is better) Translates to: CEALGSVPSTAKERTSGYPPSCV*GPSRAC Trigger: GCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGG...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGTTTGACAGGCGTTGCTaGACTCTGAATGGTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSEFDRRC*TLNGQH Trigger: GTGCTGACCATTCAGAGTTCAGCAACGCCTGTCAAA...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACATGCTGCTGGTGCATTaGATGCTGATACTGCTGCAA | + |
Preference number: 4 (lower is better) Translates to: QPGSAWHGVACSCPHYPHMLLVH*MLILLQ Trigger: TTGCAGCAGTATCAGCATGCAATGCACCAGCAGCAT...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACTACACTTCTGGGCCGTaGAGGCAGAGGCCGGGCATC | + |
Preference number: 4 (lower is better) Translates to: CEALGSVPSTAKERTSGYYTSGP*RQRPGI Trigger: GATGCCCGGCCTCTGCCTGCACGGCCCAGAAGTGTA...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGAGGTAGCGAGAATTGTCTaGGATGGTGAAGCTGCCATC | + |
Preference number: 4 (lower is better) Translates to: PVLRGMVWPAPVHTTPTEVARIV*DGEAAI Trigger: GATGGCAGCTTCACCATCCCAGACAATTCTCGCTAC...CTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTTGCTGAACTCTGAATaGTCAGCACACTGGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: QPGSAWHGVACSCPHYPHLLNSE*SAHWKW Trigger: CCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAA...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGCTTTCACTTTTACTaGCTGACACGGAGAAGGGCT | + |
Preference number: 4 (lower is better) Translates to: QPGSAWHGVACSCPHYPHCFHFY*LTRRRA Trigger: AGCCCTTCTCCGTGTCAGCCAGTAAAAGTGAAAGCA...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTACAGGAGGGCTGTGTCTaGGGCCACGCCAGGTTTGTC | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLQEGCV*GHARFV Trigger: GACAAACCTGGCGTGGCCCCAGACACAGCCCTCCTG...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGAGGGCTGGAAGGGAGTaGAGCCAAATATATCTACAC | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSERAGRE*SQIYLH Trigger: GTGTAGATATATTTGGCTCCACTCCCTTCCAGCCCT...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGTCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGA | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSESQIAT*LSPKGR Trigger: TCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGA...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | CCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACCCACACTATCTCGTATGGGTTTGTGGTTGCTaGACTCCCCAGGAGCAGGGA | + |
Preference number: 4 (lower is better) Translates to: PTLSLGMLKGVSDPHYLVWVCGC*TPQEQG Trigger: TCCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCA...TACGAGATAGTGTGGGTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGCTTTTCAGGAGAACCTaGGTGAGAAATGAAAGGGAC | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSELFRRT*VRNERD Trigger: GTCCCTTTCATTTCTCACTCAGGTTCTCCTGAAAAG...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | ATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACCTCCAGTCTCCCTGCTaGAACTGCTGGAGGACTCTA | + |
Preference number: 4 (lower is better) Translates to: ITIVQPTLSLGMLKGVSDLQSPC*NCWRTL Trigger: TAGAGTCCTCCAGCAGTTGCAGCAGGGAGACTGGAG...GTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGACTGTGCTGCAGGCTCTaGGGAGCAGGCGCTGCAAAG | + |
Preference number: 4 (lower is better) Translates to: TRAPSNNALVKYPGLDGRLCCRL*GAGAAK Trigger: CTTTGCAGCGCCTGCTCCGCAGAGCCTGCAGCACAG...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | AGGTGCAAACATAGTCTCTGCCTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGCGCTGCCCTCCGACTTaGGCATCCGAGAGAACTTCT | + |
Preference number: 4 (lower is better) Translates to: RCKHSLCLWHRTVSGAARRCPPT*ASERTS Trigger: AGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCAGCG...CCGGGCTGCACCACTTACTGTCCTGTGCCAAAGGCAGAGACTATGTTTGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTACAGTCAGCGCGACGCTaGTGTTCTCCTTGGAATCGG | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLQSARR*CSPWNR Trigger: CCGATTCCAAGGAGAACATCAGCGTCGCGCTGACTG...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACGACACGGAGAAGGGCTaGAAGGGAGTGGAGCCAAAT | + |
Preference number: 4 (lower is better) Translates to: CEALGSVPSTAKERTSGYDTEKG*KGVEPN Trigger: ATTTGGCTCCACTCCCTTCCAGCCCTTCTCCGTGTC...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACCAGATGGCAGGACACTaGCCCTGTCTTTGCCATCAG | + |
Preference number: 4 (lower is better) Translates to: CEALGSVPSTAKERTSGYQMAGH*PCLCHQ Trigger: CTGATGGCAAAGACAGGGCCAGTGTCCTGCCATCTG...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTACAGACTCTCGTCAGATaGCAGGACACTGGCCCTGTC | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLQTLVR*QDTGPV Trigger: GACAGGGCCAGTGTCCTGCCATCTGACGAGAGTCTG...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGCACATTGTCACTAATTaGATTGACAGCACAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSEHIVTN*IDSTVQ Trigger: TTGGACTGTGCTGTCAATTCAATTAGTGACAATGTG...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | AGGTGCAAACATAGTCTCTGCCTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGACGTCGAAGTCCTCCTaGTCTGGAAAAGCATGCTGG | + |
Preference number: 4 (lower is better) Translates to: RCKHSLCLWHRTVSGAARTSKSS*SGKACW Trigger: CCAGCATGCTTTTCCAGAGCAGGAGGACTTCGACGT...CCGGGCTGCACCACTTACTGTCCTGTGCCAAAGGCAGAGACTATGTTTGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | GGTGTCTCAGACCCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCTACAGAGCGCTGCCCTCCGACTTaGGCATCCGAGAGAACTTCT | + |
Preference number: 4 (lower is better) Translates to: GVSDPHYLVLSVQERATERCPPT*ASERTS Trigger: AGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCAGCG...CTCTGTAGCTCTTTCCTGCACACTCAGTACGAGATAGTGTGGGTCTGAGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGAAGGTTGATCATTTCTaGTGCTCTATACGACAGAGT | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSEKVDHF*CSIRQS Trigger: ACTCTGTCGTATAGAGCACCAGAAATGATCAACCTT...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | GTCCCTCAGCGGCTACACAGCAGCTTTCCCAGGGAGCCCACGGGAACCTCTGAGTGGTATCTGTTATTCTaGCTTTCATCTGGCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: VPQRLHSSFPREPTGTSEWYLLF*LSSGFS Trigger: GGAAAAGCCAGATGAAAGCCAGAATAACAGATACCA...CTCAGAGGTTCCCGTGGGCTCCCTGGGAAAGCTGCTGTGTAGCCGCTGAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | AGGTGCAAACATAGTCTCTGCCTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGGCTCCTTTGGGTTTGTaGTTGCTGAACTCCCCAGGA | + |
Preference number: 4 (lower is better) Translates to: RCKHSLCLWHRTVSGAARAPLGL*LLNSPG Trigger: TCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGC...CCGGGCTGCACCACTTACTGTCCTGTGCCAAAGGCAGAGACTATGTTTGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACGGTCGGGTGTGTTATTaGCATACATTCGCTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: ITIVQPTLSLGMLKGVSDGRVCY*HTFASV Trigger: CACTGAAGCGAATGTATGTCAATAACACACCCGACC...GTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | CCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCTACAGAGCCATTAGTAAGGTGCTGTGCTGGCTGCTaGTGGCGAGCTAGCATCTGC | + |
Preference number: 4 (lower is better) Translates to: PHYLVLSVQERATEPLVRCCAGC*WRASIC Trigger: GCAGATGCTAGCTCGCCATCAGCAGCCAGCACAGCA...CCTTACTAATGGCTCTGTAGCTCTTTCCTGCACACTCAGTACGAGATAGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTAGCTGGTGAGAACTCTTaGGGGGAGGTAAGATACTCG | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLAGENS*GEVRYS Trigger: CGAGTATCTTACCTCCCCGCAAGAGTTCTCACCAGC...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTAGCACCAGGAAAACAGTaGAGAATCCACCTTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLAPGKQ*RIHLRP Trigger: TGGCCGAAGGTGGATTCTCCACTGTTTTCCTGGTGC...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGACCCTGCTGCAACTGCTaGAGGACTCTATGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: TRAPSNNALVKYPGLDGRPCCNC*RTLCCC Trigger: ACAGCAGCATAGAGTCCTCCAGCAGTTGCAGCAGGG...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | AGGTGCAAACATAGTCTCTGCCTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGAATGTCTCTGCGCTGTaGAAGGACCCGTGTACTGAA | + |
Preference number: 4 (lower is better) Translates to: RCKHSLCLWHRTVSGAARNVSAL*KDPCTE Trigger: TTCAGTACACGGGTCCTTCCACAGCGCAGAGACATT...CCGGGCTGCACCACTTACTGTCCTGTGCCAAAGGCAGAGACTATGTTTGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACTCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGA | + |
Preference number: 4 (lower is better) Translates to: ITIVQPTLSLGMLKGVSDSQIAT*LSPKGR Trigger: TCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGA...GTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTAATCTCCAGTCTCCCTaGTGCAACTGCTGGAGGACT | + |
Preference number: 4 (lower is better) Translates to: TLLGADLFSSYILSNLCANLQSP*CNCWRT Trigger: AGTCCTCCAGCAGTTGCAGCAGGGAGACTGGAGATT...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GGTGTCTCAGACCCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCTACAGAGAATCTCCAGTCTCCCTaGTGCAACTGCTGGAGGACT | + |
Preference number: 4 (lower is better) Translates to: GVSDPHYLVLSVQERATENLQSP*CNCWRT Trigger: AGTCCTCCAGCAGTTGCAGCAGGGAGACTGGAGATT...CTCTGTAGCTCTTTCCTGCACACTCAGTACGAGATAGTGTGGGTCTGAGACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | AACAAAGCAGCCCCTTTCTGTCACCACTCAGTGAAGGACACAACAAGCCATCACTGGCGAGCTAGCATCTaGTGCTGCAAGAAAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: NKAAPFCHHSVKDTTSHHWRASI*CCKKAC Trigger: GCAGGCTTTCTTGCAGCAGCAGATGCTAGCTCGCCA...GTGATGGCTTGTTGTGTCCTTCACTGAGTGGTGACAGAAAGGGGCTGCTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGCCCGTGTTCTCCCTGTaGGTCTTCATCCTCTTGTTC | + |
Preference number: 4 (lower is better) Translates to: MERSQSGHHLSIFHQEDEPVFSL*VFILLF Trigger: GAACAAGAGGATGAAGACGCACAGGGAGAACACGGG...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTAGAATGGTCAGCACACTaGAAGTGGCAGCAGTGGAAT | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLEWSAH*KWQQWN Trigger: ATTCCACTGCTGCCACTTCCAGTGTGCTGACCATTC...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | ATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACAAGAAGAGTCCACTATaGTTCCAACCTGAGCTGGAA | + |
Preference number: 4 (lower is better) Translates to: ITIVQPTLSLGMLKGVSDKKSPL*FQPELE Trigger: TTCCAGCTCAGGTTGGAACCATAGTGGACTCTTCTT...GTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACTCCCAGGCAAAATGGTaGTGTGATCAACGCAGATGT | + |
Preference number: 4 (lower is better) Translates to: CEALGSVPSTAKERTSGYSQAKW*CDQRRC Trigger: ACATCTGCGTTGATCACACCACCATTTTGCCTGGGA...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGAGGCAAAATGGTGGTGTaGTCAACGCAGATGTCGCTT | + |
Preference number: 4 (lower is better) Translates to: TRAPSNNALVKYPGLDGRGKMVV*STQMSL Trigger: AAGCGACATCTGCGTTGATCACACCACCATTTTGCC...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ACAAGCCATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCACATTGTCACTAATTaGATTGACAGCACAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: TSHHHRAAHAFSGHAQGCHIVTN*IDSTVQ Trigger: TTGGACTGTGCTGTCAATTCAATTAGTGACAATGTG...ACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTTATCAGCCTTGGTGGTaGTCGGTTTCCCTCCATAAA | + |
Preference number: 4 (lower is better) Translates to: TLLGADLFSSYILSNLCAYQPWW*SVSLHK Trigger: TTTATGGAGGGAAACCGATCACCACCAAGGCTGATA...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | AGGTGCAAACATAGTCTCTGCCTTTGGCACAGGACAGTAAGTGGTGCAGCCCGGTTGTCTTGGTGCAATTaGGGTTTCTGTTGGTCCAAT | + |
Preference number: 4 (lower is better) Translates to: RCKHSLCLWHRTVSGAARLSWCN*GFCWSN Trigger: ATTGGACCAACAGAAACCTCAATTGCACCAAGACAA...CCGGGCTGCACCACTTACTGTCCTGTGCCAAAGGCAGAGACTATGTTTGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | AACAAAGCAGCCCCTTTCTGTCACCACTCAGTGAAGGACACAACAAGCCATCACTTTGACAGGCGTTGCTaGACTCTGAATGGTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: NKAAPFCHHSVKDTTSHHFDRRC*TLNGQH Trigger: GTGCTGACCATTCAGAGTTCAGCAACGCCTGTCAAA...GTGATGGCTTGTTGTGTCCTTCACTGAGTGGTGACAGAAAGGGGCTGCTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTAAACCTGAGTGAGAAATaGAAGGGACGGAAGCAAAAG | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLNLSEK*KGRKQK Trigger: CTTTTGCTTCCGTCCCTTTCATTTCTCACTCAGGTT...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGATCAGCAGAGGCCTGTaGCCCAGGTTCTCCGGCTCA | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLRISRGL*PRFSGS Trigger: TGAGCCGGAGAACCTGGGTCACAGGCCTCTGCTGAT...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCCGCCAGGTTTGTCCCTaGGCAGGGAGCTCGTGTCTC | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIRQVCP*AGSSCL Trigger: GAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCG...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTTGGAAGTGGCAGCAGTaGAATTGGCCTTTGGTCTTT | + |
Preference number: 4 (lower is better) Translates to: TLLGADLFSSYILSNLCAWKWQQ*NWPLVF Trigger: AAAGACCAAAGGCCAATTCCACTGCTGCCACTTCCA...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGTCGTGTCTCCTCTCTTaGTCTTTGCCTGTTCACACT | + |
Preference number: 4 (lower is better) Translates to: MERSQSGHHLSIFHQEDESCLLS*SLPVHT Trigger: AGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGA...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | AACAAAGCAGCCCCTTTCTGTCACCACTCAGTGAAGGACACAACAAGCCATCACATACATTCGCTTCAGTaGACATCGGATCCCACTGTG | + |
Preference number: 4 (lower is better) Translates to: NKAAPFCHHSVKDTTSHHIHSLQ*TSDPTV Trigger: CACAGTGGGATCCGATGTGCACTGAAGCGAATGTAT...GTGATGGCTTGTTGTGTCCTTCACTGAGTGGTGACAGAAAGGGGCTGCTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCTGCGGAGCAGGCGCTaGAAAGAAGGGAACAGCGCC | + |
Preference number: 4 (lower is better) Translates to: PQKKEQVATTPSINRMTFLRSRR*KEGNSA Trigger: GGCGCTGTTCCCTTCTTTGCAGCGCCTGCTCCGCAG...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGAAGAAGAGTCCACTATaGTTCCAACCTGAGCTGGAA | + |
Preference number: 4 (lower is better) Translates to: MERSQSGHHLSIFHQEDEKKSPL*FQPELE Trigger: TTCCAGCTCAGGTTGGAACCATAGTGGACTCTTCTT...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | CTCAAGTGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCACTATGGTTCCAACCTaGGCTGGAAGTGACGAGGCG | + |
Preference number: 4 (lower is better) Translates to: LKCTKRIFDTTSNSLWPCTMVPT*AGSDEA Trigger: CGCCTCGTCACTTCCAGCTCAGGTTGGAACCATAGT...GCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCACTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | CTCAAGTGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCTCCCTGCTGCAACTaGTGGAGGACTCTATGCTGC | + |
Preference number: 4 (lower is better) Translates to: LKCTKRIFDTTSNSLWPCSPCCN*WRTLCC Trigger: GCAGCATAGAGTCCTCCAGCAGTTGCAGCAGGGAGA...GCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCACTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGCTCCAGTCTCCCTGCTaGAACTGCTGGAGGACTCTA | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLRLQSPC*NCWRTL Trigger: TAGAGTCCTCCAGCAGTTGCAGCAGGGAGACTGGAG...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGTGGCGAGCTAGCATCTaGTGCTGCAAGAAAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLRWRASI*CCKKAC Trigger: GCAGGCTTTCTTGCAGCAGCAGATGCTAGCTCGCCA...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACTTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: CEALGSVPSTAKERTSGYFLLVQ*YLLFWL Trigger: AAGCCAGAATAACAGATACCATTGGACCAACAGAAA...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | CTCAAGTGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCGGCGTTGCTGAACTCTaGATGGTCAGCACACTGGAA | + |
Preference number: 4 (lower is better) Translates to: LKCTKRIFDTTSNSLWPCGVAEL*MVSTLE Trigger: TTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGCC...GCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCACTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCCAGGAGCAGGGACTTTaGCAGGCGTTGCTGAACTCT | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIQEQGL*QALLNS Trigger: AGAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTG...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCACTATGGTTCCAACCTaGGCTGGAAGTGACGAGGCG | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFITMVPT*AGSDEA Trigger: CGCCTCGTCACTTCCAGCTCAGGTTGGAACCATAGT...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | CCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCTACAGAGCCATTAGTAAGGTCGGTAAAGCCTGTCTaGAGCTTCTTATTCATCTGG | + |
Preference number: 4 (lower is better) Translates to: PHYLVLSVQERATEPLVRSVKPV*SFLFIW Trigger: CCAGATGAATAAGAAGCTGCAGACAGGCTTTACCGA...CCTTACTAATGGCTCTGTAGCTCTTTCCTGCACACTCAGTACGAGATAGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTACTGATTTGTAAAATTTaGAACTGCCTCTTTCTCAGC | + |
Preference number: 4 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLLICKI*NCLFLS Trigger: GCTGAGAAAGAGGCAGTTGCAAATTTTACAAATCAG...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | CAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCAGTTCCCATCCCCTCTGTaGTGCAGGCTCTGCGGAGCA | + |
Preference number: 4 (lower is better) Translates to: QKKEQVATTPSINRMTFQFPSPL*CRLCGA Trigger: TGCTCCGCAGAGCCTGCAGCACAGAGGGGATGGGAA...CTGAAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGCAAAAACATCCTCCTTaGTTTCACTTTTACTGGCTG | + |
Preference number: 4 (lower is better) Translates to: MERSQSGHHLSIFHQEDEQKHPP*FHFYWL Trigger: CAGCCAGTAAAAGTGAAAGCAAGGAGGATGTTTTTG...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTGACTCTATGCTGCTGTaGGGGTTGCTGAGGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: HFLGPSLYMQNRDAQCICDSMLL*GLLRGS Trigger: GGACCCCCTCAGCAACCCCCACAGCAGCATAGAGTC...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCGGCGTTGCTGAACTCTaGATGGTCAGCACACTGGAA | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIGVAEL*MVSTLE Trigger: TTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGCC...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTTCCTCTTTCTCAGCAACTaGCCTGTTGGCACCGTAAGA | + |
Preference number: 4 (lower is better) Translates to: ALILQTSSNLHSSKRDHFLFLSN*PVGTVR Trigger: TCTTACGGTGCCAACAGGTCAGTTGCTGAGAAAGAG...GAAATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR GCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTTCTCCCTGCTGCAACTaGTGGAGGACTCTATGCTGC | + |
Preference number: 4 (lower is better) Translates to: PQKKEQVATTPSINRMTFSPCCN*WRTLCC Trigger: GCAGCATAGAGTCCTCCAGCAGTTGCAGCAGGGAGA...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCTTCTGCAAGCTGCGCTaGTTGACTTTCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIFCKLR*LTFCCC Trigger: GCAGCAGCAGAAAGTCAAGCAGCGCAGCTTGCAGAA...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCCATTCTCAATGTCTCTaGGCTGTGGAAGGACCCGTG | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIHSQCL*AVEGPV Trigger: CACGGGTCCTTCCACAGCGCAGAGACATTGAGAATG...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | GCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCAACTAGCACCAGGAAAACAGTaGAGAATCCACCTTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: AQKEFLTPPLTVFGLAQLAPGKQ*RIHLRP Trigger: TGGCCGAAGGTGGATTCTCCACTGTTTTCCTGGTGC...TAGTTGAGCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | CTCAAGTGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCGTAGCGAGAATTGTCTaGGATGGTGAAGCTGCCATC | + |
Preference number: 4 (lower is better) Translates to: LKCTKRIFDTTSNSLWPCVARIV*DGEAAI Trigger: GATGGCAGCTTCACCATCCCAGACAATTCTCGCTAC...GCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCACTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
CDS-3UTR CCA 90 bp | GCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTTCGAATGGTCAGCACACTaGAAGTGGCAGCAGTGGAAT | + |
Preference number: 4 (lower is better) Translates to: ALILQTSSNLHSSKRDHFEWSAH*KWQQWN Trigger: ATTCCACTGCTGCCACTTCCAGTGTGCTGACCATTC...GAAATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | GCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCAACTAGCTCCTTTGGGTTTGTaGTTGCTGAACTCCCCAGGA | + |
Preference number: 4 (lower is better) Translates to: AQKEFLTPPLTVFGLAQLAPLGL*LLNSPG Trigger: TCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGC...TAGTTGAGCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCGAAGTCCTCCTGCTCTaGAAAAGCATGCTGGGACAG | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIEVLLL*KSMLGQ Trigger: CTGTCCCAGCATGCTTTTCCAGAGCAGGAGGACTTC...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCTGGTGCCACAAGTCTaGAGGATGAAAGGGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: PQKKEQVATTPSINRMTFLVPQV*RMKGLG Trigger: GCCAAGCCCTTTCATCCTCCAGACTTGTGGCACCAG...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGGTCGGGTGTGTTATTaGCATACATTCGCTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLRGRVCY*HTFASV Trigger: CACTGAAGCGAATGTATGTCAATAACACACCCGACC...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTCAGGAGCAGGGACTTTaGCAGGCGTTGCTGAACTCT | + |
Preference number: 4 (lower is better) Translates to: HFLGPSLYMQNRDAQCICQEQGL*QALLNS Trigger: AGAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTG...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGTGCCTGTTCACACTCTaGATCAGAGCTGTGTTTGTC | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLRCLFTL*IRAVFV Trigger: GACAAACACAGCTCTGATTCAGAGTGTGAACAGGCA...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | CTTCCCTACTTGAGCATTAACCTTCCATGTTTTGAAGATGTAATGAATTGCACACCCTGCTGCAACTGCTaGAGGACTCTATGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: LPYLSINLPCFEDVMNCTPCCNC*RTLCCC Trigger: ACAGCAGCATAGAGTCCTCCAGCAGTTGCAGCAGGG...TGTGCAATTCATTACATCTTCAAAACATGGAAGGTTAATGCTCAAGTAGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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3UTR CAA 72 bp | AAAATGCCTCTAACAGCAATGCAAAGGAGCTACCCATaGGACCTCCAATTAAATCATCTGTCCAATGAGCGG | + |
Preference number: 4 (lower is better) Translates to: KMPLTAMQRSYP*DLQLNHLSNER Trigger: CCGCTCATTGGACAGATGATTTAATTGGAGGTCCAATGGGTAGCTCCTTTGCATTGCTGTTAGAGGCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS-3UTR TCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTAAAAGGATTCCAGCCTaGCATGTCAGGAGGGTGACT | + |
Preference number: 4 (lower is better) Translates to: PQKKEQVATTPSINRMTFKRIPA*HVRRVT Trigger: AGTCACCCTCCTGACATGTCAGGCTGGAATCCTTTT...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGTCGGTAAAGCCTGTCTaGAGCTTCTTATTCATCTGG | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLRSVKPV*SFLFIW Trigger: CCAGATGAATAAGAAGCTGCAGACAGGCTTTACCGA...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTGCTGGTGAGAACTCTTaGGGGGAGGTAAGATACTCG | + |
Preference number: 4 (lower is better) Translates to: HFLGPSLYMQNRDAQCICAGENS*GEVRYS Trigger: CGAGTATCTTACCTCCCCGCAAGAGTTCTCACCAGC...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | GCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCAACTATGGAAGTGGCAGCAGTaGAATTGGCCTTTGGTCTTT | + |
Preference number: 4 (lower is better) Translates to: AQKEFLTPPLTVFGLAQLWKWQQ*NWPLVF Trigger: AAAGACCAAAGGCCAATTCCACTGCTGCCACTTCCA...TAGTTGAGCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | CTCAAGTGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCCGGCTCGGGAAGAGTTaGTGGAAGAAAAGAATTATT | + |
Preference number: 4 (lower is better) Translates to: LKCTKRIFDTTSNSLWPCRLGKS*WKKRII Trigger: AATAATTCTTTTCTTCCATCAACTCTTCCCGAGCCG...GCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCACTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GATGTCAAACATGAGTGCCTTACAGGAATTCTTTACATAAATGTAAGCCATCTGTGCAAGAAAGCCTGCTaGTACTGCTGCATCATGGCA | + |
Preference number: 4 (lower is better) Translates to: DVKHECLTGILYINVSHLCKKAC*YCCIMA Trigger: TGCCATGATGCAGCAGTATCAGCAGGCTTTCTTGCA...CAGATGGCTTACATTTATGTAAAGAATTCCTGTAAGGCACTCATGTTTGACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GATGTCAAACATGAGTGCCTTACAGGAATTCTTTACATAAATGTAAGCCATCTGAAAAGGATTCCAGCCTaGCATGTCAGGAGGGTGACT | + |
Preference number: 4 (lower is better) Translates to: DVKHECLTGILYINVSHLKRIPA*HVRRVT Trigger: AGTCACCCTCCTGACATGTCAGGCTGGAATCCTTTT...CAGATGGCTTACATTTATGTAAAGAATTCCTGTAAGGCACTCATGTTTGACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTTCAGGAGAACCTGAGTaGGAAATGAAAGGGACGGAA | + |
Preference number: 4 (lower is better) Translates to: PQKKEQVATTPSINRMTFSGEPE*EMKGTE Trigger: TTCCGTCCCTTTCATTTCTCACTCAGGTTCTCCTGA...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCACCTTCAGATCCCGGTaGATTATGGGAGTCTTACAT | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFITFRSR*IMGVLH Trigger: ATGTAAGACTCCCATAATCCACCGGGATCTGAAGGT...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTATATATCTACACTTCTaGGCCGTGCAGGCAGAGGCC | + |
Preference number: 4 (lower is better) Translates to: TEFYFKCLPATFEGLSYFIYLHF*AVQAEA Trigger: GGCCTCTGCCTGCACGGCCCAGAAGTGTAGATATAT...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTTGCAAGAAAGCCTGCTaGTACTGCTGCATCATGGCA | + |
Preference number: 4 (lower is better) Translates to: TEFYFKCLPATFEGLSYFCKKAC*YCCIMA Trigger: TGCCATGATGCAGCAGTATCAGCAGGCTTTCTTGCA...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTCTCTTTCTCAGCAACTaGCCTGTTGGCACCGTAAGA | + |
Preference number: 4 (lower is better) Translates to: TEFYFKCLPATFEGLSYFLFLSN*PVGTVR Trigger: TCTTACGGTGCCAACAGGTCAGTTGCTGAGAAAGAG...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCATTTCCAGGTCTCAATaGTCCTTTGGGTTTGTGGTT | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIISRSQ*SFGFVV Trigger: AACCACAAACCCAAAGGAGCATTGAGACCTGGAAAT...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTATGCTGCTGGTGCATTaGATGCTGATACTGCTGCAA | + |
Preference number: 4 (lower is better) Translates to: HFLGPSLYMQNRDAQCICMLLVH*MLILLQ Trigger: TTGCAGCAGTATCAGCATGCAATGCACCAGCAGCAT...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | CTTGCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTGGTATCTGTTATTCTaGCTTTCATCTGGCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: LALILQTSSNLHSSKRDHWYLLF*LSSGFS Trigger: GGAAAAGCCAGATGAAAGCCAGAATAACAGATACCA...ATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTTTGCTGAACTCTGAATaGTCAGCACACTGGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: HFLGPSLYMQNRDAQCICLLNSE*SAHWKW Trigger: CCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAA...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTTCTGGAAAAGCATGCTaGGACAGGTTCTTCCCATCC | + |
Preference number: 4 (lower is better) Translates to: TEFYFKCLPATFEGLSYFSGKAC*DRFFPS Trigger: GGATGGGAAGAACCTGTCCCAGCATGCTTTTCCAGA...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGAAGAAAAGAATTATTaGTGTTGGAGACCGGACAAT | + |
Preference number: 4 (lower is better) Translates to: VQGKQLNSISNVSQLHLREEKNY*CWRPDN Trigger: ATTGTCCGGTCTCCAACATCAATAATTCTTTTCTTC...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | GCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTTCGAAGAAAAGAATTATTaGTGTTGGAGACCGGACAAT | + |
Preference number: 4 (lower is better) Translates to: ALILQTSSNLHSSKRDHFEEKNY*CWRPDN Trigger: ATTGTCCGGTCTCCAACATCAATAATTCTTTTCTTC...GAAATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCGCAGTGATAGATTTTTaGTTTGGAGAATGTTCCGTC | + |
Preference number: 4 (lower is better) Translates to: ASGTLISYSQLRRPHQFIAVIDF*FGECSV Trigger: GACGGAACATTCTCCAAATCAAAAATCTATCACTGC...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTATACATTCGCTTCAGTaGACATCGGATCCCACTGTG | + |
Preference number: 4 (lower is better) Translates to: TEFYFKCLPATFEGLSYFIHSLQ*TSDPTV Trigger: CACAGTGGGATCCGATGTGCACTGAAGCGAATGTAT...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CCA 90 bp | TGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCAACTAAGGTTGATCATTTCTaGTGCTCTATACGACAGAGT | + |
Preference number: 4 (lower is better) Translates to: CTKRIFDTTSNSLWPCSTKVDHF*CSIRQS Trigger: ACTCTGTCGTATAGAGCACCAGAAATGATCAACCTT...AGTTGAGCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | GCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTTCTTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: ALILQTSSNLHSSKRDHFFLLVQ*YLLFWL Trigger: AAGCCAGAATAACAGATACCATTGGACCAACAGAAA...GAAATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR TCA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTTTGTCTTGGTGCAATTaGGGTTTCTGTTGGTCCAAT | + |
Preference number: 4 (lower is better) Translates to: HFLGPSLYMQNRDAQCICLSWCN*GFCWSN Trigger: ATTGGACCAACAGAAACCTCAATTGCACCAAGACAA...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CCA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTCCTTGGAATCGGAAATaGTTAAAAACTCATTGCTGC | + |
Preference number: 4 (lower is better) Translates to: PQKKEQVATTPSINRMTFPWNRK*LKTHCC Trigger: GCAGCAATGAGTTTTTAACCATTTCCGATTCCAAGG...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR TCA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTCGGCTCGGGAAGAGTTaGTGGAAGAAAAGAATTATT | + |
Preference number: 4 (lower is better) Translates to: TEFYFKCLPATFEGLSYFRLGKS*WKKRII Trigger: AATAATTCTTTTCTTCCATCAACTCTTCCCGAGCCG...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR GCA 90 bp | GATGTCAAACATGAGTGCCTTACAGGAATTCTTTACATAAATGTAAGCCATCTGCTGATTTGTAAAATTTaGAACTGCCTCTTTCTCAGC | + |
Preference number: 4 (lower is better) Translates to: DVKHECLTGILYINVSHLLICKI*NCLFLS Trigger: GCTGAGAAAGAGGCAGTTGCAAATTTTACAAATCAG...CAGATGGCTTACATTTATGTAAAGAATTCCTGTAAGGCACTCATGTTTGACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS GCA 90 bp | CTGGTAGCGGCCGACGGCGAACACCCGGACCCCCATGGACGAGCTTaGGAAGCCGCCGCCGAGCCCGCCGCCCGCGGCCCCGCCAGCCGC | + |
Preference number: 5 (lower is better) Translates to: LVAADGEHPDPHGRA*EAAAEPAARGPASR Trigger: GCGGCTGGCGGGGCCGCGGGCGGCGGGCTCGGCGGCGGCTTCGCAAGCTCGTCCATGGGGGTCCGGGTGTTCGCCGTCGGCCGCTACCAG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 90 bp | CAGCGCATCAGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTaGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCC | + |
Preference number: 5 (lower is better) Translates to: QRISRRAGRGQEGCV*GHARFVPAQGARVS Trigger: GGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCTGATGCGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 90 bp | GGAAAACAGTGGAGAATCCACCTTCGGCCAGCGACTCCTCCAGGGTaGCCTGGTAGCGGCCGACGGCGAACACCCGGACCCCCATGGACG | + |
Preference number: 5 (lower is better) Translates to: GKQWRIHLRPATPPG*PGSGRRRTPGPPWT Trigger: CGTCCATGGGGGTCCGGGTGTTCGCCGTCGGCCGCTACCAGGTCACCCTGGAGGAGTCGCTGGCCGAAGGTGGATTCTCCACTGTTTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS GCA 90 bp | CCGGGGTCAGGAGGGCTGTGTCTGGGGCCACGCCAGGTTTGTCCCTaGGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTTCAC | + |
Preference number: 5 (lower is better) Translates to: PGSGGLCLGPRQVCP*AGSSCLLSWSLPVH Trigger: GTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACAGCCCTCCTGACCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 90 bp | GGCCCTGATGGGGCTGGTGCCACAAGTCTGGAGGATGAAAGGGCTTaGCACCGAATGGGTCCAGCAGACTCTCGTCAGATGGCAGGACAC | + |
Preference number: 5 (lower is better) Translates to: GPDGAGATSLEDERA*HRMGPADSRQMAGH Trigger: GTGTCCTGCCATCTGACGAGAGTCTGCTGGACCCATTCGGTGCCAAGCCCTTTCATCCTCCAGACTTGTGGCACCAGCCCCATCAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 90 bp | TGCTCTGGAAAAGCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTaGTGCAGGCTCTGCGGAGCAGGCGCTGCAAAGAAGGGAACAGCG | + |
Preference number: 5 (lower is better) Translates to: CSGKACWDRFFPSPL*CRLCGAGAAKKGTA Trigger: CGCTGTTCCCTTCTTTGCAGCGCCTGCTCCGCAGAGCCTGCAGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATGCTTTTCCAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACGGTCTCAATGCTCCTTaGGGTTTGTGGTTGCTGAAC | + |
Preference number: 5 (lower is better) Translates to: QPGSAWHGVACSCPHYPHGLNAP*GLWLLN Trigger: GTTCAGCAACCACAAACCCAAAGGAGCATTGAGACC...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 90 bp | AAATATATCTACACTTCTGGGCCGTGCAGGCAGAGGCCGGGCATCTaGCCCCACCGCGGGCCAGTCCTGTACGCTGACCTTCTTGTTGAA | + |
Preference number: 5 (lower is better) Translates to: KYIYTSGPCRQRPGI*PHRGPVLYADLLVE Trigger: TTCAACAAGAAGGTCAGCGTACAGGACTGGCCCGCGGTGGGGCCAGATGCCCGGCCTCTGCCTGCACGGCCCAGAAGTGTAGATATATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 90 bp | CCCCACCGCGGGCCAGTCCTGTACGCTGACCTTCTTGTTGAAGGGTaGCTTTGTGAACACGTCGAAGTCCTCCTGCTCTGGAAAAGCATG | + |
Preference number: 5 (lower is better) Translates to: PHRGPVLYADLLVEG*LCEHVEVLLLWKSM Trigger: CATGCTTTTCCAGAGCAGGAGGACTTCGACGTGTTCACAAAGGCACCCTTCAACAAGAAGGTCAGCGTACAGGACTGGCCCGCGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 90 bp | TGGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTaGGGCCCACCTTCTTGTGTCTGCGGGCCCTCTCGGGCGTGCGGT | + |
Preference number: 5 (lower is better) Translates to: WNRKWLKTHCCSGSL*GPPSCVCGPSRACG Trigger: ACCGCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGCCGCTGCCCTCCGACTaGGGCATCCGAGAGAACTTC | + |
Preference number: 5 (lower is better) Translates to: MERSQSGHHLSIFHQEDEPLPSD*GIRENF Trigger: GAAGTTCTCTCGGATGCCCAAGTCGGAGGGCAGCGG...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACCCAGGAGCAGGGACTTaGACAGGCGTTGCTGAACTC | + |
Preference number: 5 (lower is better) Translates to: CEALGSVPSTAKERTSGYPGAGT*TGVAEL Trigger: GAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGG...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | ACAAGCCATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCCTTTGGGTTTGTGGTaGCTGAACTCCCCAGGAGCA | + |
Preference number: 5 (lower is better) Translates to: TSHHHRAAHAFSGHAQGCPLGLW*LNSPGA Trigger: TGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGG...ACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS CCA 90 bp | CCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTCTTaGTCTTTGCCTGTTCACACTCTGAATCAGAGCTGTGTTTGTCGT | + |
Preference number: 5 (lower is better) Translates to: PRQVCPCAGSSCLLS*SLPVHTLNQSCVCR Trigger: ACGACAAACACAGCTCTGATTCAGAGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 90 bp | AAGGGCACGGCACCAAAGTCATCCATTCTCAATGTCTCTGCGCTGTaGAAGGACCCGTGTACTGAATTCTGTCGCGGCCTCCCAGGCAAA | + |
Preference number: 5 (lower is better) Translates to: KGTAPKSSILNVSAL*KDPCTEFCRGLPGK Trigger: TTTGCCTGGGAGGCCGCGACAGAATTCAGTACACGGGTCCTTCCACAGCGCAGAGACATTGAGAATGGATGACTTTGGTGCCGTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 90 bp | CTGAACTCCCCAGGAGCAGGGACTTTGACAGGCGTTGCTGAACTCTaGATGGTCAGCACACTGGAAGTGGCAGCAGTGGAATTGGCCTTT | + |
Preference number: 5 (lower is better) Translates to: LNSPGAGTLTGVAEL*MVSTLEVAAVELAF Trigger: AAAGGCCAATTCCACTGCTGCCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGGGGAGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS TCA 90 bp | GTGGTTGCTGAACTCCCCAGGAGCAGGGACTTTGACAGGCGTTGCTaGACTCTGAATGGTCAGCACACTGGAAGTGGCAGCAGTGGAATT | + |
Preference number: 5 (lower is better) Translates to: VVAELPRSRDFDRRC*TLNGQHTGSGSSGI Trigger: AATTCCACTGCTGCCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGGGGAGTTCAGCAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACGGTCTCAATGCTCCTTaGGGTTTGTGGTTGCTGAAC | + |
Preference number: 5 (lower is better) Translates to: ITIVQPTLSLGMLKGVSDGLNAP*GLWLLN Trigger: GTTCAGCAACCACAAACCCAAAGGAGCATTGAGACC...GTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | CAGCCCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGCAGTGATAGATTTTaGATTTGGAGAATGTTCCGT | + |
Preference number: 5 (lower is better) Translates to: QPGSAWHGVACSCPHYPHCSDRF*IWRMFR Trigger: ACGGAACATTCTCCAAATCAAAAATCTATCACTGCA...GTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | CCGGTTCTGCGTGGCATGGTGTGGCCTGCTCCTGTCCACACTACCCCCACTGAGATCATCATGTCCCTTTaGTACTTGACCCCTAATTAC | + |
Preference number: 5 (lower is better) Translates to: PVLRGMVWPAPVHTTPTEIIMSL*YLTPNY Trigger: GTAATTAGGGGTCAAGTACAAAAGGGACATGATGAT...CTCAGTGGGGGTAGTGTGGACAGGAGCAGGCCACACCATGCCACGCAGAACCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGAGCCCAGATATCAGCCTaGGTGGTGATCGGTTTCCCT | + |
Preference number: 5 (lower is better) Translates to: TRAPSNNALVKYPGLDGRAQISA*VVIGFP Trigger: AGGGAAACCGATCACCACCAAGGCTGATATCTGGGC...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | ATGGAGAGGAGCCAGAGTGGGCACCACCTTAGTATCTTCCATCAGGAAGATGAGCCTTTGGGTTTGTGGTaGCTGAACTCCCCAGGAGCA | + |
Preference number: 5 (lower is better) Translates to: MERSQSGHHLSIFHQEDEPLGLW*LNSPGA Trigger: TGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGG...CTCATCTTCCTGATGGAAGATACTAAGGTGGTGCCCACTCTGGCTCCTCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCGGGGCCACGCCAGGTTaGTCCCTGCGCAGGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: ASGTLISYSQLRRPHQFIGATPG*SLRREL Trigger: GAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCC...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 90 bp | GTGTTATTGACATACATTCGCTTCAGTGCACATCGGATCCCACTGTaGGTCCGCACCAGGAAAACAGTGGAGAATCCACCTTCGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: VLLTYIRFSAHRIPL*VRTRKTVENPPSAS Trigger: GCTGGCCGAAGGTGGATTCTCCACTGTTTTCCTGGTGCGGACTCACAGTGGGATCCGATGTGCACTGAAGCGAATGTATGTCAATAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 90 bp | AAGACTTCAGACCCATTTCCAGGTCTCAATGCTCCTTTGGGTTTGTaGTTGCTGAACTCCCCAGGAGCAGGGACTTTGACAGGCGTTGCT | + |
Preference number: 5 (lower is better) Translates to: KTSDPFPGLNAPLGL*LLNSPGAGTLTGVA Trigger: AGCAACGCCTGTCAAAGTCCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGCATTGAGACCTGGAAATGGGTCTGAAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | CCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACCCACACTATCTCGTACAGTGGAATTGGCCTTaGGTCTTTGTCTTGGTGCAA | + |
Preference number: 5 (lower is better) Translates to: PTLSLGMLKGVSDPHYLVQWNWP*VFVLVQ Trigger: TTGCACCAAGACAAAGACCAAAGGCCAATTCCACTG...TACGAGATAGTGTGGGTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACTCGCCCCGAGCCTGTTaGATCTTAGAAGGTCAAATT | + |
Preference number: 5 (lower is better) Translates to: CEALGSVPSTAKERTSGYSPRAC*ILEGQI Trigger: AATTTGACCTTCTAAGATCAAACAGGCTCGGGGCGA...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTATGTACGCTGACCTTCTaGTTGAAGGGTGCCTTTGTG | + |
Preference number: 5 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLCTLTF*LKGAFV Trigger: CACAAAGGCACCCTTCAACAAGAAGGTCAGCGTACA...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 90 bp | CTTTCTCAGCAACTGACCTGTTGGCACCGTAAGAAGAGTCCACTATaGTTCCAACCTGAGCTGGAAGTGACGAGGCGTAGGAAACTAAGG | + |
Preference number: 5 (lower is better) Translates to: LSQQLTCWHRKKSPL*FQPELEVTRRRKLR Trigger: CCTTAGTTTCCTACGCCTCGTCACTTCCAGCTCAGGTTGGAACCATAGTGGACTCTTCTTACGGTGCCAACAGGTCAGTTGCTGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | CCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCTACAGAGCCATTAGTAAGGGCCCAGATATCAGCCTaGGTGGTGATCGGTTTCCCT | + |
Preference number: 5 (lower is better) Translates to: PHYLVLSVQERATEPLVRAQISA*VVIGFP Trigger: AGGGAAACCGATCACCACCAAGGCTGATATCTGGGC...CCTTACTAATGGCTCTGTAGCTCTTTCCTGCACACTCAGTACGAGATAGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ACAAGCCATCACCATCGTGCAGCCCACGCTTTCTCTGGGCATGCTCAAGGGTGTTCGGCTCGGGAAGAGTaGATGGAAGAAAAGAATTAT | + |
Preference number: 5 (lower is better) Translates to: TSHHHRAAHAFSGHAQGCSAREE*MEEKNY Trigger: ATAATTCTTTTCTTCCATCAACTCTTCCCGAGCCGA...ACACCCTTGAGCATGCCCAGAGAAAGCGTGGGCTGCACGATGGTGATGGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS CCA 90 bp | GAACCTAATCAAGCAATGCACGTTGTGGGAGTAGCGAGAATTGTCTaGGATGGTGAAGCTGCCATCACAGATAGCAACCTGACTCTCACC | + |
Preference number: 5 (lower is better) Translates to: EPNQAMHVVGVARIV*DGEAAITDSNLTLT Trigger: GGTGAGAGTCAGGTTGCTATCTGTGATGGCAGCTTCACCATCCCAGACAATTCTCGCTACTCCCACAACGTGCATTGCTTGATTAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 90 bp | GCGTTGCTGAACTCTGAATGGTCAGCACACTGGAAGTGGCAGCAGTaGAATTGGCCTTTGGTCTTTGTCTTGGTGCAATTGAGGTTTCTG | + |
Preference number: 5 (lower is better) Translates to: ALLNSEWSAHWKWQQ*NWPLVFVLVQLRFL Trigger: CAGAAACCTCAATTGCACCAAGACAAAGACCAAAGGCCAATTCCACTGCTGCCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGATATGGGAGTCTTACATaGATGCAATCGTGCGACAGC | + |
Preference number: 5 (lower is better) Translates to: TRAPSNNALVKYPGLDGRYGSLT*MQSCDS Trigger: GCTGTCGCACGATTGCATCAATGTAAGACTCCCATA...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | CCCACGCTTTCTCTGGGCATGCTCAAGGGTGTCTCAGACCCACACTATCTCGTACGCAAAGTAGGATACTaGAAATATGTCAGGTCTGCA | + |
Preference number: 5 (lower is better) Translates to: PTLSLGMLKGVSDPHYLVRKVGY*KYVRSA Trigger: TGCAGACCTGACATATTTCAAGTATCCTACTTTGCG...TACGAGATAGTGTGGGTCTGAGACACCCTTGAGCATGCCCAGAGAAAGCGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | TGCGAGGCCCTGGGTTCAGTTCCCAGCACCGCAAAAGAAAGAACAAGTGGCTACTCGGCTCGGGAAGAGTaGATGGAAGAAAAGAATTAT | + |
Preference number: 5 (lower is better) Translates to: CEALGSVPSTAKERTSGYSAREE*MEEKNY Trigger: ATAATTCTTTTCTTCCATCAACTCTTCCCGAGCCGA...GTAGCCACTTGTTCTTTCTTTTGCGGTGCTGGGAACTGAACCCAGGGCCTCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 90 bp | ACAAATGTTGAGGTCGGGTGTGTTATTGACATACATTCGCTTCAGTaGACATCGGATCCCACTGTGAGTCCGCACCAGGAAAACAGTGGA | + |
Preference number: 5 (lower is better) Translates to: TNVEVGCVIDIHSLQ*TSDPTVSPHQENSG Trigger: TCCACTGTTTTCCTGGTGCGGACTCACAGTGGGATCCGATGTGCACTGAAGCGAATGTATGTCAATAACACACCCGACCTCAACATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ACACGTGCACCTTCTAACAATGCTTTAGTGAAGTACCCAGGCCTGGATGGCCGAAGGTCGGGTGTGTTATaGACATACATTCGCTTCAGT | + |
Preference number: 5 (lower is better) Translates to: TRAPSNNALVKYPGLDGRRSGVL*TYIRFS Trigger: ACTGAAGCGAATGTATGTCAATAACACACCCGACCT...TCGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | TCATGGTGGAAGCATTCATTCAGCCCCAAACGCTGCATCTGGGGTGTGCACCTATTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAA | + |
Preference number: 5 (lower is better) Translates to: SWWKHSFSPKRCIWGVHLFVLVQ*RFLLVQ Trigger: TTGGACCAACAGAAACCTCAATTGCACCAAGACAAA...TAGGTGCACACCCCAGATGCAGCGTTTGGGGCTGAATGAATGCTTCCACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | CTTCCCTACTTGAGCATTAACCTTCCATGTTTTGAAGATGTAATGAATTGCACACCGCTGCCCTCCGACTaGGGCATCCGAGAGAACTTC | + |
Preference number: 5 (lower is better) Translates to: LPYLSINLPCFEDVMNCTPLPSD*GIRENF Trigger: GAAGTTCTCTCGGATGCCCAAGTCGGAGGGCAGCGG...TGTGCAATTCATTACATCTTCAAAACATGGAAGGTTAATGCTCAAGTAGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | AACAAAGCAGCCCCTTTCTGTCACCACTCAGTGAAGGACACAACAAGCCATCACAGGTCGGGTGTGTTATaGACATACATTCGCTTCAGT | + |
Preference number: 5 (lower is better) Translates to: NKAAPFCHHSVKDTTSHHRSGVL*TYIRFS Trigger: ACTGAAGCGAATGTATGTCAATAACACACCCGACCT...GTGATGGCTTGTTGTGTCCTTCACTGAGTGGTGACAGAAAGGGGCTGCTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTTCCCTTTTACAAATGTaGAGGTCGGGTGTGTTATTG | + |
Preference number: 5 (lower is better) Translates to: TLLGADLFSSYILSNLCASLLQM*RSGVLL Trigger: CAATAACACACCCGACCTCAACATTTGTAAAAGGGA...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | GCTCAAGGGTGTCTCAGACCCACACTATCTCGTACTGAGTGTGCAGGAAAGAGCGGAAGAAAAGAATTATaGATGTTGGAGACCGGACAA | + |
Preference number: 5 (lower is better) Translates to: AQGCLRPTLSRTECAGKSGRKEL*MLETGQ Trigger: TTGTCCGGTCTCCAACATCAATAATTCTTTTCTTCC...GCTCTTTCCTGCACACTCAGTACGAGATAGTGTGGGTCTGAGACACCCTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS CCA 90 bp | CGCAAAGTAGGATACTTGAAATATGTCAGGTCTGCACTCGGGGTCTaGTTCAAGCATGAACCTAATCAAGCAATGCACGTTGTGGGAGTA | + |
Preference number: 5 (lower is better) Translates to: RKVGYLKYVRSALGV*FKHEPNQAMHVVGV Trigger: TACTCCCACAACGTGCATTGCTTGATTAGGTTCATGCTTGAACCAGACCCCGAGTGCAGACCTGACATATTTCAAGTATCCTACTTTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ACCCTGCTTGGAGCAGACCTTTTCTCCAGCTACATACTGAGCAACCTCTGTGCTCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTA | + |
Preference number: 5 (lower is better) Translates to: TLLGADLFSSYILSNLCAQLRFL*VQWYLL Trigger: TAACAGATACCATTGGACCAACAGAAACCTCAATTG...AGCACAGAGGTTGCTCAGTATGTAGCTGGAGAAAAGGTCTGCTCCAAGCAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGCTCGTGTCTCCTCTCTaGGTCTTTGCCTGTTCACAC | + |
Preference number: 5 (lower is better) Translates to: VQGKQLNSISNVSQLHLRLVSPL*VFACSH Trigger: GTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAG...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | GATGTCAAACATGAGTGCCTTACAGGAATTCTTTACATAAATGTAAGCCATCTGCCAGGAGCAGGGACTTaGACAGGCGTTGCTGAACTC | + |
Preference number: 5 (lower is better) Translates to: DVKHECLTGILYINVSHLPGAGT*TGVAEL Trigger: GAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGG...CAGATGGCTTACATTTATGTAAAGAATTCCTGTAAGGCACTCATGTTTGACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTACACTGGCCCTGTCTTaGCCATCAGTCAGCGCGACG | + |
Preference number: 5 (lower is better) Translates to: TEFYFKCLPATFEGLSYFTLALS*PSVSAT Trigger: CGTCGCGCTGACTGATGGCAAAGACAGGGCCAGTGT...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | GTACAGGGGAAGCAACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGCAGTGGAATTGGCCTTaGGTCTTTGTCTTGGTGCAA | + |
Preference number: 5 (lower is better) Translates to: VQGKQLNSISNVSQLHLRQWNWP*VFVLVQ Trigger: TTGCACCAAGACAAAGACCAAAGGCCAATTCCACTG...CCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGTTGCTTCCCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | TGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCAACTGTGGCAGCAGTGGAATaGGCCTTTGGTCTTTGTCTT | + |
Preference number: 5 (lower is better) Translates to: CTKRIFDTTSNSLWPCSTVAAVE*AFGLCL Trigger: AAGACAAAGACCAAAGGCCAATTCCACTGCTGCCAC...AGTTGAGCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTACGCTGACCTTCTTGTaGAAGGGTGCCTTTGTGAAC | + |
Preference number: 5 (lower is better) Translates to: PQKKEQVATTPSINRMTFTLTFL*KGAFVN Trigger: GTTCACAAAGGCACCCTTCAACAAGAAGGTCAGCGT...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | GCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTTCACCGGACAATCCTTTTaGGCGAATTTAAACGCAAAG | + |
Preference number: 5 (lower is better) Translates to: ALILQTSSNLHSSKRDHFTGQSF*ANLNAK Trigger: CTTTGCGTTTAAATTCGCCAAAAAGGATTGTCCGGT...GAAATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCATGGTTAAAAACTCATaGCTGCTCTGGGAGTCTCTG | + |
Preference number: 5 (lower is better) Translates to: ASGTLISYSQLRRPHQFIMVKNS*LLWESL Trigger: CAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCAT...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | CTTCCCTACTTGAGCATTAACCTTCCATGTTTTGAAGATGTAATGAATTGCACATATGGGAGTCTTACATaGATGCAATCGTGCGACAGC | + |
Preference number: 5 (lower is better) Translates to: LPYLSINLPCFEDVMNCTYGSLT*MQSCDS Trigger: GCTGTCGCACGATTGCATCAATGTAAGACTCCCATA...TGTGCAATTCATTACATCTTCAAAACATGGAAGGTTAATGCTCAAGTAGGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
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CDS-3UTR CAA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCACCGGACAATCCTTTTaGGCGAATTTAAACGCAAAG | + |
Preference number: 5 (lower is better) Translates to: ASGTLISYSQLRRPHQFITGQSF*ANLNAK Trigger: CTTTGCGTTTAAATTCGCCAAAAAGGATTGTCCGGT...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS-3UTR CAA 90 bp | TGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCTCAACTTTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAA | + |
Preference number: 5 (lower is better) Translates to: CTKRIFDTTSNSLWPCSTFVLVQ*RFLLVQ Trigger: TTGGACCAACAGAAACCTCAATTGCACCAAGACAAA...AGTTGAGCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
CDS-3UTR CAA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTGTGGCAGCAGTGGAATaGGCCTTTGGTCTTTGTCTT | + |
Preference number: 5 (lower is better) Translates to: TEFYFKCLPATFEGLSYFVAAVE*AFGLCL Trigger: AAGACAAAGACCAAAGGCCAATTCCACTGCTGCCAC...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS-3UTR CAA 90 bp | CTCAAGTGCACAAAAAGAATTTTTGACACCACCTCTAACAGTCTTTGGCCTTGCAAAGAATTATTGATGTaGGAGACCGGACAATCCTTT | + |
Preference number: 5 (lower is better) Translates to: LKCTKRIFDTTSNSLWPCKELLM*ETGQSF Trigger: AAAGGATTGTCCGGTCTCCAACATCAATAATTCTTT...GCAAGGCCAAAGACTGTTAGAGGTGGTGTCAAAAATTCTTTTTGTGCACTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
CDS-3UTR CAA 90 bp | CTTGCCCTAATTCTGCAAACCTCCTCAAACCTACACTCTTCCAAAAGAGATCATTCAAGTGTCCCTTACTaGATCTTAGAAGGTCAAATT | + |
Preference number: 5 (lower is better) Translates to: LALILQTSSNLHSSKRDHSSVPY*ILEGQI Trigger: AATTTGACCTTCTAAGATCAAGTAAGGGACACTTGA...ATGATCTCTTTTGGAAGAGTGTAGGTTTGAGGAGGTTTGCAGAATTAGGGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
CDS-3UTR CAA 90 bp | GCAAGTGGAACTCTGATTTCATATTCACAACTCAGAAGACCACATCAGTTCATCAAAGAATTATTGATGTaGGAGACCGGACAATCCTTT | + |
Preference number: 5 (lower is better) Translates to: ASGTLISYSQLRRPHQFIKELLM*ETGQSF Trigger: AAAGGATTGTCCGGTCTCCAACATCAATAATTCTTT...GATGAACTGATGTGGTCTTCTGAGTTGTGAATATGAAATCAGAGTTCCACTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS-3UTR CAA 90 bp | CCGCAAAAGAAAGAACAAGTGGCTACTACTCCTTCTATTAATAGGATGACCTTTGGAAGAAAAGAATTATaGATGTTGGAGACCGGACAA | + |
Preference number: 5 (lower is better) Translates to: PQKKEQVATTPSINRMTFGRKEL*MLETGQ Trigger: TTGTCCGGTCTCCAACATCAATAATTCTTTTCTTCC...AAAGGTCATCCTATTAATAGAAGGAGTAGTAGCCACTTGTTCTTTCTTTTGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS-3UTR CAA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTCGCAAAGTAGGATACTaGAAATATGTCAGGTCTGCA | + |
Preference number: 5 (lower is better) Translates to: TEFYFKCLPATFEGLSYFRKVGY*KYVRSA Trigger: TGCAGACCTGACATATTTCAAGTATCCTACTTTGCG...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS-3UTR CAA 90 bp | CATTTCTTAGGCCCTTCTCTTTATATGCAAAACAGAGATGCTCAGTGTATATGTCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTA | + |
Preference number: 5 (lower is better) Translates to: HFLGPSLYMQNRDAQCICQLRFL*VQWYLL Trigger: TAACAGATACCATTGGACCAACAGAAACCTCAATTG...ACATATACACTGAGCATCTCTGTTTTGCATATAAAGAGAAGGGCCTAAGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112974.6 |
||
CDS-3UTR CAA 90 bp | ACTGAATTCTATTTCAAATGTCTCCCAGCTACATTTGAGGGCTTAAGTTACTTTCTTGAGCCTCCATTTTaGGTAAGGTTTGCAGTGATA | + |
Preference number: 5 (lower is better) Translates to: TEFYFKCLPATFEGLSYFLEPPF*VRFAVI Trigger: TATCACTGCAAACCTTACCAAAAATGGAGGCTCAAG...AAAGTAACTTAAGCCCTCAAATGTAGCTGGGAGACATTTGAAATAGAATTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS CAA 90 bp | CCTGGTAGCGGCCGACGGCGAACACCCGGACCCCCATGGACGAGCTaGCGAAGCCGCCGCCGAGCCCGCCGCCCGCGGCCCCGCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: PGSGRRRTPGPPWTS*RSRRRARRPRPRQP Trigger: CGGCTGGCGGGGCCGCGGGCGGCGGGCTCGGCGGCGGCTTCGCAAGCTCGTCCATGGGGGTCCGGGTGTTCGCCGTCGGCCGCTACCAGG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS GCA 72 bp | CGCCCGCGGCCCCGCCAGCCGCCGCCCCGCCGCCGCTaGCCTCCGACTTGGGCATCCGAGAGAACTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: RPRPRQPPPRRR*PPTWASERTSS Trigger: TGAAGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCAGCGGCGGCGGGGCGGCGGCTGGCGGGGCCGCGGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 72 bp | CCTGGTAGCGGCCGACGGCGAACACCCGGACCCCCATaGACGAGCTTGCGAAGCCGCCGCCGAGCCCGCCGC | + |
Preference number: 6 (lower is better) Translates to: PGSGRRRTPGPP*TSLRSRRRARR Trigger: GCGGCGGGCTCGGCGGCGGCTTCGCAAGCTCGTCCATGGGGGTCCGGGTGTTCGCCGTCGGCCGCTACCAGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 72 bp | AGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTaGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCT | + |
Preference number: 6 (lower is better) Translates to: SRRAGRGQEGCV*GHARFVPAQGA Trigger: AGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CAA 90 bp | GAGCGGGCCGGGGTCAGGAGGGCTGTGTCTGGGGCCACGCCAGGTTaGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCC | + |
Preference number: 6 (lower is better) Translates to: ERAGVRRAVSGATPG*SLRRELVSPLLVFA Trigger: GGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 72 bp | TGGAGAATCCACCTTCGGCCAGCGACTCCTCCAGGGTaGCCTGGTAGCGGCCGACGGCGAACACCCGGACCC | + |
Preference number: 6 (lower is better) Translates to: WRIHLRPATPPG*PGSGRRRTPGP Trigger: GGGTCCGGGTGTTCGCCGTCGGCCGCTACCAGGTCACCCTGGAGGAGTCGCTGGCCGAAGGTGGATTCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | GGGGTCAGGAGGGCTGTGTCTGGGGCCACGCCAGGTTaGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTCTTG | + |
Preference number: 6 (lower is better) Translates to: GVRRAVSGATPG*SLRRELVSPLL Trigger: CAAGAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACAGCCCTCCTGACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 72 bp | GCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTGCTaGAGGCTCTGCGGAGCAGGCGCTGCAAAGAAGGGA | + |
Preference number: 6 (lower is better) Translates to: ACWDRFFPSPLC*RLCGAGAAKKG Trigger: TCCCTTCTTTGCAGCGCCTGCTCCGCAGAGCCTGCAGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 72 bp | AAAGCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTaGTGCAGGCTCTGCGGAGCAGGCGCTGCAAAGAAG | + |
Preference number: 6 (lower is better) Translates to: KACWDRFFPSPL*CRLCGAGAAKK Trigger: CTTCTTTGCAGCGCCTGCTCCGCAGAGCCTGCAGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
||
CDS CCA 72 bp | GGGGCTGGTGCCACAAGTCTGGAGGATGAAAGGGCTTaGCACCGAATGGGTCCAGCAGACTCTCGTCAGATG | + |
Preference number: 6 (lower is better) Translates to: GAGATSLEDERA*HRMGPADSRQM Trigger: CATCTGACGAGAGTCTGCTGGACCCATTCGGTGCCAAGCCCTTTCATCCTCCAGACTTGTGGCACCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 72 bp | CTTGGCACCGAATGGGTCCAGCAGACTCTCGTCAGATaGCAGGACACTGGCCCTGTCTTTGCCATCAGTCAG | + |
Preference number: 6 (lower is better) Translates to: LGTEWVQQTLVR*QDTGPVFAISQ Trigger: CTGACTGATGGCAAAGACAGGGCCAGTGTCCTGCCATCTGACGAGAGTCTGCTGGACCCATTCGGTGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 72 bp | GAACTCCCCAGGAGCAGGGACTTTGACAGGCGTTGCTaGACTCTGAATGGTCAGCACACTGGAAGTGGCAGC | + |
Preference number: 6 (lower is better) Translates to: ELPRSRDFDRRC*TLNGQHTGSGS Trigger: GCTGCCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGGGGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS GCA 72 bp | GTGAACACGTCGAAGTCCTCCTGCTCTGGAAAAGCATaGTGGGACAGGTTCTTCCCATCCCCTCTGTGCTGC | + |
Preference number: 6 (lower is better) Translates to: VNTSKSSCSGKA*WDRFFPSPLCC Trigger: GCAGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATGCTTTTCCAGAGCAGGAGGACTTCGACGTGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS GCA 72 bp | GGGCCAGTCCTGTACGCTGACCTTCTTGTTGAAGGGTaGCTTTGTGAACACGTCGAAGTCCTCCTGCTCTGG | + |
Preference number: 6 (lower is better) Translates to: GPVLYADLLVEG*LCEHVEVLLLW Trigger: CCAGAGCAGGAGGACTTCGACGTGTTCACAAAGGCACCCTTCAACAAGAAGGTCAGCGTACAGGACTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 72 bp | CCAGGAGCAGGGACTTTGACAGGCGTTGCTGAACTCTaGATGGTCAGCACACTGGAAGTGGCAGCAGTGGAA | + |
Preference number: 6 (lower is better) Translates to: PGAGTLTGVAEL*MVSTLEVAAVE Trigger: TTCCACTGCTGCCACTTCCAGTGTGCTGACCATTCAGAGTTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS TCA 72 bp | GTAAGATACTCGGGTGATACCTGCTGTGCTGGCTGCTaGTGGCGAGCTAGCATCTGCTGCTGCAAGAAAGCC | + |
Preference number: 6 (lower is better) Translates to: VRYSGDTCCAGC*WRASICCCKKA Trigger: GGCTTTCTTGCAGCAGCAGATGCTAGCTCGCCATCAGCAGCCAGCACAGCAGGTATCACCCGAGTATCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS TCA 72 bp | TGGCGAGCTAGCATCTGCTGCTGCAAGAAAGCCTGCTaGTACTGCTGCATCATGGCAGGATACTGGGATGCA | + |
Preference number: 6 (lower is better) Translates to: WRASICCCKKAC*YCCIMAGYWDA Trigger: TGCATCCCAGTATCCTGCCATGATGCAGCAGTATCAGCAGGCTTTCTTGCAGCAGCAGATGCTAGCTCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 72 bp | CAACTGACCTGTTGGCACCGTAAGAAGAGTCCACTATaGTTCCAACCTGAGCTGGAAGTGACGAGGCGTAGG | + |
Preference number: 6 (lower is better) Translates to: QLTCWHRKKSPL*FQPELEVTRRR Trigger: CCTACGCCTCGTCACTTCCAGCTCAGGTTGGAACCATAGTGGACTCTTCTTACGGTGCCAACAGGTCAGTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | CCATTTCCAGGTCTCAATGCTCCTTTGGGTTTGTGGTaGCTGAACTCCCCAGGAGCAGGGACTTTGACAGGC | + |
Preference number: 6 (lower is better) Translates to: PFPGLNAPLGLW*LNSPGAGTLTG Trigger: GCCTGTCAAAGTCCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGCATTGAGACCTGGAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS GCA 72 bp | GAGGTCGGGTGTGTTATTGACATACATTCGCTTCAGTaGACATCGGATCCCACTGTGAGTCCGCACCAGGAA | + |
Preference number: 6 (lower is better) Translates to: EVGCVIDIHSLQ*TSDPTVSPHQE Trigger: TTCCTGGTGCGGACTCACAGTGGGATCCGATGTGCACTGAAGCGAATGTATGTCAATAACACACCCGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS GCA 72 bp | TTGAAGGGTGCCTTTGTGAACACGTCGAAGTCCTCCTaGTCTGGAAAAGCATGCTGGGACAGGTTCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: LKGAFVNTSKSS*SGKACWDRFFP Trigger: TGGGAAGAACCTGTCCCAGCATGCTTTTCCAGAGCAGGAGGACTTCGACGTGTTCACAAAGGCACCCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 72 bp | GACCCATTTCCAGGTCTCAATGCTCCTTTGGGTTTGTaGTTGCTGAACTCCCCAGGAGCAGGGACTTTGACA | + |
Preference number: 6 (lower is better) Translates to: DPFPGLNAPLGL*LLNSPGAGTLT Trigger: TGTCAAAGTCCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGCATTGAGACCTGGAAATGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | AAGACTTCAGACCCATTTCCAGGTCTCAATGCTCCTTaGGGTTTGTGGTTGCTGAACTCCCCAGGAGCAGGG | + |
Preference number: 6 (lower is better) Translates to: KTSDPFPGLNAP*GLWLLNSPGAG Trigger: CCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGCATTGAGACCTGGAAATGGGTCTGAAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | ACTTCAGACCCATTTCCAGGTCTCAATGCTCCTTTGGGTTTGTGGTaGCTGAACTCCCCAGGAGCAGGGACTTTGACAGGCGTTGCTGAA | + |
Preference number: 6 (lower is better) Translates to: TSDPFPGLNAPLGLW*LNSPGAGTLTGVAE Trigger: TTCAGCAACGCCTGTCAAAGTCCCTGCTCCTGGGGAGTTCAGCAACCACAAACCCAAAGGAGCATTGAGACCTGGAAATGGGTCTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | CTGGCCCTGTCTTTGCCATCAGTCAGCGCGACGCTGATGTTCTCCTaGGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCT | + |
Preference number: 6 (lower is better) Translates to: LALSLPSVSATLMFS*ESEMVKNSLLLWES Trigger: AGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCAAGGAGAACATCAGCGTCGCGCTGACTGATGGCAAAGACAGGGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 72 bp | ACATACATTCGCTTCAGTGCACATCGGATCCCACTGTaGGTCCGCACCAGGAAAACAGTGGAGAATCCACCT | + |
Preference number: 6 (lower is better) Translates to: TYIRFSAHRIPL*VRTRKTVENPP Trigger: AGGTGGATTCTCCACTGTTTTCCTGGTGCGGACTCACAGTGGGATCCGATGTGCACTGAAGCGAATGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 72 bp | TTGGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTaGGAGTCTCTGCGGCCCACCTTCTTGTGTCTGCGG | + |
Preference number: 6 (lower is better) Translates to: LESEMVKNSLLL*ESLRPTFLCLR Trigger: CCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CCA 72 bp | AACTCTGAATGGTCAGCACACTGGAAGTGGCAGCAGTaGAATTGGCCTTTGGTCTTTGTCTTGGTGCAATTG | + |
Preference number: 6 (lower is better) Translates to: NSEWSAHWKWQQ*NWPLVFVLVQL Trigger: CAATTGCACCAAGACAAAGACCAAAGGCCAATTCCACTGCTGCCACTTCCAGTGTGCTGACCATTCAGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | GCACACTGGAAGTGGCAGCAGTGGAATTGGCCTTTGGTCTTTGTCTaGGTGCAATTGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTC | + |
Preference number: 6 (lower is better) Translates to: AHWKWQQWNWPLVFV*VQLRFLLVQWYLLF Trigger: GAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGGCCAATTCCACTGCTGCCACTTCCAGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | TCTTTGCCATCAGTCAGCGCGACGCTGATGTTCTCCTaGGAATCGGAAATGGTTAAAAACTCATTGCTGCTC | + |
Preference number: 6 (lower is better) Translates to: SLPSVSATLMFS*ESEMVKNSLLL Trigger: GAGCAGCAATGAGTTTTTAACCATTTCCGATTCCAAGGAGAACATCAGCGTCGCGCTGACTGATGGCAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS TCA 72 bp | TCTGGGATGGTGAAGCTGCCATCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGAGTGAAGAAACAAAGT | + |
Preference number: 6 (lower is better) Translates to: SGMVKLPSQIAT*LSPKGRVKKQS Trigger: ACTTTGTTTCTTCACTCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGATGGCAGCTTCACCATCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS TCA 72 bp | ATTACGGGATTCTCGGAGGTTTTCTTTCCGGCTCGCTaGTCTTTACATAGTGGACTTGAGCCTCCATTTTTG | + |
Preference number: 6 (lower is better) Translates to: ITGFSEVFFPAR*SLHSGLEPPFL Trigger: CAAAAATGGAGGCTCAAGTCCACTATGTAAAGATCAGCGAGCCGGAAAGAAAACCTCCGAGAATCCCGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035635.10 |
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CDS CAA 90 bp | GACCGGACAATCCTTTTTGGCGAATTTAAACGCAAAGTAGGATACTaGAAATATGTCAGGTCTGCACTCGGGGTCTGGTTCAAGCATGAA | + |
Preference number: 6 (lower is better) Translates to: DRTILFGEFKRKVGY*KYVRSALGVWFKHE Trigger: TTCATGCTTGAACCAGACCCCGAGTGCAGACCTGACATATTTCAAGTATCCTACTTTGCGTTTAAATTCGCCAAAAAGGATTGTCCGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | AAGTGGCAGCAGTGGAATTGGCCTTTGGTCTTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTCA | + |
Preference number: 6 (lower is better) Translates to: KWQQWNWPLVFVLVQ*RFLLVQWYLLFWLS Trigger: TGAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGGCCAATTCCACTGCTGCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | TGGAATTGGCCTTTGGTCTTTGTCTTGGTGCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTATTCTGGCTTTCATCTGGCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: WNWPLVFVLVQLRFL*VQWYLLFWLSSGFS Trigger: GGAAAAGCCAGATGAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGGCCAATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS TCA 72 bp | ATTTGTAAAATTTGCAACTGCCTCTTTCTCAGCAACTaGCCTGTTGGCACCGTAAGAAGAGTCCACTATGGT | + |
Preference number: 6 (lower is better) Translates to: ICKICNCLFLSN*PVGTVRRVHYG Trigger: ACCATAGTGGACTCTTCTTACGGTGCCAACAGGTCAGTTGCTGAGAAAGAGGCAGTTGCAAATTTTACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS TCA 72 bp | CTTGGAAAAATTGTCTTCTCCAAAAGGATTCCAGCCTaGCATGTCAGGAGGGTGACTAATGGTCTTCTGATT | + |
Preference number: 6 (lower is better) Translates to: LGKIVFSKRIPA*HVRRVTNGLLI Trigger: AATCAGAAGACCATTAGTCACCCTCCTGACATGTCAGGCTGGAATCCTTTTGGAGAAGACAATTTTTCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | ATTTCCCTTTTACAAATGTTGAGGTCGGGTGTGTTATaGACATACATTCGCTTCAGTGCACATCGGATCCCA | + |
Preference number: 6 (lower is better) Translates to: ISLLQMLRSGVL*TYIRFSAHRIP Trigger: TGGGATCCGATGTGCACTGAAGCGAATGTATGTCAATAACACACCCGACCTCAACATTTGTAAAAGGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | ATCCTTTTTGGCGAATTTAAACGCAAAGTAGGATACTaGAAATATGTCAGGTCTGCACTCGGGGTCTGGTTC | + |
Preference number: 6 (lower is better) Translates to: ILFGEFKRKVGY*KYVRSALGVWF Trigger: GAACCAGACCCCGAGTGCAGACCTGACATATTTCAAGTATCCTACTTTGCGTTTAAATTCGCCAAAAAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | CAGTGGAATTGGCCTTTGGTCTTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTC | + |
Preference number: 6 (lower is better) Translates to: QWNWPLVFVLVQ*RFLLVQWYLLF Trigger: GAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGGCCAATTCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | CTGAGTGCATTAGAAACTGTTGCTGAAGTATATGCTGCTGGTGCATaGCATGCTGATACTGCTGCAAGTAAGCATTTTGAAGTAGTTGCT | + |
Preference number: 6 (lower is better) Translates to: LSALETVAEVYAAGA*HADTAASKHFEVVA Trigger: AGCAACTACTTCAAAATGCTTACTTGCAGCAGTATCAGCATGCAATGCACCAGCAGCATATACTTCAGCAACAGTTTCTAATGCACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CCA 72 bp | TTTGTCTTGGTGCAATTGAGGTTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTTTCATCTGGCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: FVLVQLRFLLVQ*YLLFWLSSGFS Trigger: GGAAAAGCCAGATGAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | CCTTTGGTCTTTGTCTTGGTGCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTATTCTGGCTTTCATCT | + |
Preference number: 6 (lower is better) Translates to: PLVFVLVQLRFL*VQWYLLFWLSS Trigger: AGATGAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 90 bp | TGGCCAGATAACTCTTTCATAATCGTGATTTCCCTTTTACAAATGTaGAGGTCGGGTGTGTTATTGACATACATTCGCTTCAGTGCACAT | + |
Preference number: 6 (lower is better) Translates to: WPDNSFIIVISLLQM*RSGVLLTYIRFSAH Trigger: ATGTGCACTGAAGCGAATGTATGTCAATAACACACCCGACCTCAACATTTGTAAAAGGGAAATCACGATTATGAAAGAGTTATCTGGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | TTAGAAACTGTTGCTGAAGTATATGCTGCTGGTGCATaGCATGCTGATACTGCTGCAAGTAAGCATTTTGAA | + |
Preference number: 6 (lower is better) Translates to: LETVAEVYAAGA*HADTAASKHFE Trigger: TTCAAAATGCTTACTTGCAGCAGTATCAGCATGCAATGCACCAGCAGCATATACTTCAGCAACAGTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | TCGGGAAGAGTTGATGGAAGAAAAGAATTATTGATGTaGGAGACCGGACAATCCTTTTTGGCGAATTTAAAC | + |
Preference number: 6 (lower is better) Translates to: SGRVDGRKELLM*ETGQSFLANLN Trigger: GTTTAAATTCGCCAAAAAGGATTGTCCGGTCTCCAACATCAATAATTCTTTTCTTCCATCAACTCTTCCCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |
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CDS CAA 72 bp | AACTCTTTCATAATCGTGATTTCCCTTTTACAAATGTaGAGGTCGGGTGTGTTATTGACATACATTCGCTTC | + |
Preference number: 6 (lower is better) Translates to: NSFIIVISLLQM*RSGVLLTYIRF Trigger: GAAGCGAATGTATGTCAATAACACACCCGACCTCAACATTTGTAAAAGGGAAATCACGATTATGAAAGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035635.10 ENSMUST00000112974.6 |