Pregenerated sensors for BMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027358Ensembl transcript IDs: ENSMUST00000028836.7
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAATTATTCCCACTGGTCCTGCTTTGTTCTTGCTGCAGGGAGGGTaGCGAGAGCTTTTCTATCAGATCAGTAATGTCTGGTTCTTATCC | + |
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Preference number: 1 (lower is better) Translates to: LIIPTGPALFLLQGG*RELFYQISNVWFLS Trigger: GGATAAGAACCAGACATTACTGATCTGATAGAAAAGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGGAATAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR GCA 90 bp | GGTCAGAGAACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTaGGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGAGAATAGA | + |
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Preference number: 1 (lower is better) Translates to: GQRTGCRQETYAQFC*VSGKCRKLGALENR Trigger: TCTATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTTCTCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR GCA 90 bp | ACAGGTCAGAGAACAGGGTGCAGGCAGGAAACATATGCTCAATTTTaGTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: TGQRTGCRQETYAQF*CVSGKCRKLGALEN Trigger: ATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR TCA 90 bp | TGGAGAAATATGTTCAAACACATATCCCTGGAAAGAAAAGCAAGCTaGCAGGTCAGAGAACAGGGTGCAGGCAGGAAACATATGCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: WRNMFKHISLERKAS*QVREQGAGRKHMLN Trigger: ATTGAGCATATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTTTCCAGGGATATGTGTTTGAACATATTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR TCA 90 bp | AGGGATTATAGGCTTAAGAAAGAACAAGATGCCATCATCACTTCCTaGCATAGTCACAGTTTTCCTAATTATTCCCACTGGTCCTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RDYRLKKEQDAIITS*HSHSFPNYSHWSCF Trigger: AAAGCAGGACCAGTGGGAATAATTAGGAAAACTGTGACTATGTCAGGAAGTGATGATGGCATCTTGTTCTTTCTTAAGCCTATAATCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR TCA 90 bp | AGAATGAAAGTTCTCACGGATTGGACAACCACTCTGCAACATTCCTaGGAATTGAAGAATATAATCTTGAAAGTCAGCAAAGTAGATTAT | + |
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Preference number: 1 (lower is better) Translates to: RMKVLTDWTTTLQHS*ELKNIILKVSKVDY Trigger: ATAATCTACTTTGCTGACTTTCAAGATTATATTCTTCAATTCTCAGGAATGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTCATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR GCA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGGTCCTGCTTTGTTCTTaGTGCAGGGAGGGTGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: HMLNFAACQANVENWVLWVLLCS*CREGGE Trigger: CTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGAC...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGAAAAGCAAGCTGACAGGTCAGAGAACAGGGTGCAGGCAGGAAACATAATACAAGCCAATTTCTaGTTCTTTATGAGGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: WKEKQADRSENRVQAGNIIQANF*FFMRAH Trigger: GTGGGCCCTCATAAAGAAGCAGAAATTGGCTTGTAT...TATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGAAAAGCAAGCTGACAGGTCAGAGAACAGGGTGCAGGCAGGAAACATAAAAGTTCTCACGGATTaGACAACCACTCTGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: WKEKQADRSENRVQAGNIKVLTD*TTTLQH Trigger: ATGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTT...TATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR TCA 90 bp | AACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTTGGACTTGAACTTGTaGACTTTAACAGTAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: NRVQAGNICSILLRVRQMLDLNL*TLTVVL Trigger: CAGCACTACTGTTAAAGTTCACAAGTTCAAGTCCAA...CATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR GCA 90 bp | GAGAAATATGTTCAAACACATATCCCTGGAAAGAAAAGCAAGCTGACAGGTCAGTATTCCCACTGGTCCTaGTTTGTTCTTGCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: EKYVQTHIPGKKSKLTGQYSHWS*FVLAAG Trigger: CCCTGCAGCAAGAACAAAGCAGGACCAGTGGGAATA...CTGACCTGTCAGCTTGCTTTTCTTTCCAGGGATATGTGTTTGAACATATTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGCTGCAAGAAACAGACAGCAAGTGTGCAAGCACTTTGCTCAGCAACCTTTTCATGTGCTGGAGTTaGACCCATATAAAATGTACA | + |
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Preference number: 2 (lower is better) Translates to: VVLQETDSKCASTLLSNLFMCWS*THIKCT Trigger: TGTACATTTTATATGGGTTCAACTCCAGCACATGAA...AAGGTTGCTGAGCAAAGTGCTTGCACACTTGCTGTCTGTTTCTTGCAGCACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR CAA 90 bp | GAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATaGGGTGCTTTGGAGAATAGAGAGATTGCTGATAGGGTAAACACA | + |
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Preference number: 2 (lower is better) Translates to: ETYAQFCCVSGKCRK*GALENREIADRVNT Trigger: TGTGTTTACCCTATCAGCAATCTCTCTATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR CCA 72 bp | CCCACTGGTCCTGCTTTGTTCTTGCTGCAGGGAGGGTaGCGAGAGCTTTTCTATCAGATCAGTAATGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PTGPALFLLQGG*RELFYQISNVW Trigger: CCAGACATTACTGATCTGATAGAAAAGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR CAA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGGGTCCTGCTTTGTTCTaGCTGCAGGGAGGGTGGCGA | + |
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Preference number: 3 (lower is better) Translates to: HMLNFAACQANVENWVLWGPALF*LQGGWR Trigger: TCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACC...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR GCA 72 bp | CATAGTCACAGTTTTCCTAATTATTCCCACTGGTCCTaGTTTGTTCTTGCTGCAGGGAGGGTGGCGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: HSHSFPNYSHWS*FVLAAGRVARA Trigger: AGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGGAATAATTAGGAAAACTGTGACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR CAA 90 bp | AACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGGAAAGTTCTCACGGATaGGACAACCACTCTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: NRVQAGNICSILLRVRQMESSHG*DNHSAT Trigger: TGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTC...CATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR TCA 72 bp | ATGTTCAAACACATATCCCTGGAAAGAAAAGCAAGCTaGCAGGTCAGAGAACAGGGTGCAGGCAGGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: MFKHISLERKAS*QVREQGAGRKH Trigger: ATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTTTCCAGGGATATGTGTTTGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR GCA 72 bp | ACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTaGGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: TGCRQETYAQFC*VSGKCRKLGAL Trigger: CAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR GCA 72 bp | AGAACAGGGTGCAGGCAGGAAACATATGCTCAATTTTaGTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: RTGCRQETYAQF*CVSGKCRKLGA Trigger: AGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR CAA 90 bp | GTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGAGAATAGAGAGATTGCTGATAAGTGTGCAAGCACTTaGCTCAGCAACCTTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: VSGKCRKLGALENREIADKCAST*LSNLPC Trigger: ACATGGAAGGTTGCTGAGCAAAGTGCTTGCACACTT...ATCAGCAATCTCTCTATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| 3UTR-3UTR CAA 90 bp | GACAACCACTCTGCAACATTCCTGAGAATTGAAGAATATAATCTTGAAAGTCAGCTTCATGTGCTGGAGTaGAACCCATATAAAATGTAC | + |
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Preference number: 3 (lower is better) Translates to: DNHSATFLRIEEYNLESQLHVLE*NPYKMY Trigger: GTACATTTTATATGGGTTCAACTCCAGCACATGAAG...CTGACTTTCAAGATTATATTCTTCAATTCTCAGGAATGTTGCAGAGTGGTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | TCCCACTGGTCCTGCTTTGTTCTTGCTGCAGGGAGGGTGGCGAGAGCTTTTCTACTTGCGGCCCAGCTCTaGAATGAGGCCGGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SHWSCFVLAAGRVARAFLLAAQL*NEAGRA Trigger: GGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAG...TAGAAAAGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | TGGAAAGAAAAGCAAGCTGACAGGTCAGAGAACAGGGTGCAGGCAGGAAACATAGCCCTCTCCAGCCGGTaGTCTGGGGCGGGCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WKEKQADRSENRVQAGNIALSSR*SGAGAP Trigger: AGGAGCGCCCGCCCCAGACCACCGGCTGGAGAGGGC...TATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR TCA 90 bp | CTGGAAGGGATTATAGGCTTAAGAAAGAACAAGATGCCATCATCACTTCCTGACGGCCCAGCTCTGGAATaGGGCCGGCCGCGCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LEGIIGLRKNKMPSSLPDGPALE*GRPRRP Trigger: TGGGCGGCGCGGCCGGCCTCATTCCAGAGCTGGGCC...GTCAGGAAGTGATGATGGCATCTTGTTCTTTCTTAAGCCTATAATCCCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | TCCCACTGGTCCTGCTTTGTTCTTGCTGCAGGGAGGGTGGCGAGAGCTTTTCTATGGTGTGTCCCTGTGTaGTCCACCGCATCACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SHWSCFVLAAGRVARAFLWCVPV*STASQL Trigger: CAGCTGTGATGCGGTGGACCACACAGGGACACACCA...TAGAAAAGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR TCA 90 bp | AACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGCGCTCCTGGCTGGCCTaGGTGCCTGCGGTACAGATC | + |
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Preference number: 4 (lower is better) Translates to: NRVQAGNICSILLRVRQMRSWLA*VPAVQI Trigger: GATCTGTACCGCAGGCACTCAGGCCAGCCAGGAGCG...CATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | AACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGCTTCGTGATGGAAGCTaGGCACGGTGTTGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: NRVQAGNICSILLRVRQMLRDGS*ARCWRG Trigger: GCCGCGCCAACACCGTGCGCAGCTTCCATCACGAAG...CATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | ATTCCCCCTAATAAGAATGAAAGTTCTCACGGATTGGACAACCACTCTGCAACAAGCTGCGCACGGTGTTaGCGCGGCTGGCTGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: IPPNKNESSHGLDNHSATSCARC*RGWLPS Trigger: AGAGGGCAGCCAGCCGCGCCAACACCGTGCGCAGCT...TGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTCATTCTTATTAGGGGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | TCCCACTGGTCCTGCTTTGTTCTTGCTGCAGGGAGGGTGGCGAGAGCTTTTCTATTAGTGGAGTTCAGGTaGTCAGCAAGGGGAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SHWSCFVLAAGRVARAFLLVEFR*SARGKG Trigger: TCCTTTTCCCCTTGCTGACCACCTGAACTCCACTAA...TAGAAAAGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR TCA 90 bp | AACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTCTTGCAGCTGGACTTaGGGCGCTTCCGCTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: NRVQAGNICSILLRVRQMSCSWT*GASAVC Trigger: ACAAACAGCGGAAGCGCCTCAAGTCCAGCTGCAAGA...CATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | ATTCCCCCTAATAAGAATGAAAGTTCTCACGGATTGGACAACCACTCTGCAACAGCACCACGACGTCCTTaGTGGGGGTGGGTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IPPNKNESSHGLDNHSATAPRRP*WGWVSA Trigger: AGCAGAGACCCACCCCCAGCAAGGACGTCGTGGTGC...TGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTCATTCTTATTAGGGGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | GTAGTGCTGCAAGAAACAGACAGCAAGTGTGCAAGCACTTTGCTCAGCAACCTTCCACAAACCCATGGTTaGTGTGTCCCTGTGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VVLQETDSKCASTLLSNLPQTHG*CVPVWS Trigger: GGACCACACAGGGACACACCAACCATGGGTTTGTGG...AAGGTTGCTGAGCAAAGTGCTTGCACACTTGCTGTCTGTTTCTTGCAGCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | GTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGAGAATAGAGAGATTGCTGATCCACGACGTCCTTGCTaGGGGTGGGTCTCTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VSGKCRKLGALENREIADPRRPC*GWVSAS Trigger: TGAAGCAGAGACCCACCCCCAGCAAGGACGTCGTGG...ATCAGCAATCTCTCTATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | TCCCACTGGTCCTGCTTTGTTCTTGCTGCAGGGAGGGTGGCGAGAGCTTTTCTATGGTGTCCAATAGTCTaGTCACAGGAAATTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SHWSCFVLAAGRVARAFLWCPIV*SQEISS Trigger: ACTTGAAATTTCCTGTGACCAGACTATTGGACACCA...TAGAAAAGCTCTCGCCACCCTCCCTGCAGCAAGAACAAAGCAGGACCAGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | AAGAAAAGCAAGCTGACAGGTCAGAGAACAGGGTGCAGGCAGGAAACATATGCTGGGTTCTCCTCTAAATaGGCCACTTCCACCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: KKSKLTGQRTGCRQETYAGFSSK*ATSTTN Trigger: GTTTGTGGTGGAAGTGGCCCATTTAGAGGAGAACCC...AGCATATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | GAGAAATATGTTCAAACACATATCCCTGGAAAGAAAAGCAAGCTGACAGGTCAGCTGGGGGTGGGTCTCTaGTTCAGGCCAAACATGCTG | + |
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Preference number: 4 (lower is better) Translates to: EKYVQTHIPGKKSKLTGQLGVGL*FRPNML Trigger: CAGCATGTTTGGCCTGAAGCAGAGACCCACCCCCAG...CTGACCTGTCAGCTTGCTTTTCTTTCCAGGGATATGTGTTTGAACATATTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | ATTCCCCCTAATAAGAATGAAAGTTCTCACGGATTGGACAACCACTCTGCAACAGCTGGCCTGAGTGCCTaGGGTACAGATCTAGCATAT | + |
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Preference number: 4 (lower is better) Translates to: IPPNKNESSHGLDNHSATAGLSA*GTDLAY Trigger: ATATGCTAGATCTGTACCGCAGGCACTCAGGCCAGC...TGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTCATTCTTATTAGGGGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | GTAGTGCTGCAAGAAACAGACAGCAAGTGTGCAAGCACTTTGCTCAGCAACCTTGAAGATCTGGAGTTCTaGAGATGTGAGAAACTCGTC | + |
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Preference number: 4 (lower is better) Translates to: VVLQETDSKCASTLLSNLEDLEF*RCEKLV Trigger: GACGAGTTTCTCACATCTGCAGAACTCCAGATCTTC...AAGGTTGCTGAGCAAAGTGCTTGCACACTTGCTGTCTGTTTCTTGCAGCACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGGATTATAGGCTTAAGAAAGAACAAGATGCCATCATCACTTCCTGACTCCACCACAAACCCATaGTTGGTGTGTCCCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LEGIIGLRKNKMPSSLPDSTTNP*LVCPCV Trigger: CACACAGGGACACACCAACCATGGGTTTGTGGTGGA...GTCAGGAAGTGATGATGGCATCTTGTTCTTTCTTAAGCCTATAATCCCTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR TCA 90 bp | CGAGAGCTTTTCTATCAGATCAGTAATGTCTGGTTCTTATCCAAATATTCCCCCGGACAGAACTTAAATTaGAGAAGAAGCGCCGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RELFYQISNVWFLSKYSPGQNLN*RRSAGP Trigger: CGGCCCGGCGCTTCTTCTTCAATTTAAGTTCTGTCC...GGGGGAATATTTGGATAAGAACCAGACATTACTGATCTGATAGAAAAGCTCTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR TCA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGCAATGGCCTTATCTGTaGCCAGCTGTGTTCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: HMLNFAACQANVENWVLWQWPYL*PAVFIL Trigger: CAAGATGAACACAGCTGGTCACAGATAAGGCCATTG...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR TCA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGTGTTTGTGTTTGGCTTaGCGCTTTTCTCGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: HMLNFAACQANVENWVLWCLCLA*RFSRLW Trigger: CCACAAACGAGAAAAGCGTCAAGCCAAACACAAACA...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | ATTCCCCCTAATAAGAATGAAAGTTCTCACGGATTGGACAACCACTCTGCAACACTGTGTTCATCTTGGTaGAAAGACCTGCTAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: IPPNKNESSHGLDNHSATLCSSW*KDLLIL Trigger: GAGGATTAGCAGGTCTTTGCACCAAGATGAACACAG...TGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTCATTCTTATTAGGGGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGTCCGCTGTTTGTGTTTaGCTTGACGCTTTTCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: HMLNFAACQANVENWVLWSAVCV*LDAFLV Trigger: AACGAGAAAAGCGTCAAGCCAAACACAAACAGCGGA...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR GCA 90 bp | GTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGAGAATAGAGAGATTGCTGATTGTGGGGACACAGCATaGCTTAGGGATTTTGGAATT | + |
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Preference number: 4 (lower is better) Translates to: VSGKCRKLGALENREIADCGDTA*LRDFGI Trigger: AATTCCAAAATCCCTAAGGCATGCTGTGTCCCCACA...ATCAGCAATCTCTCTATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS-3UTR CCA 90 bp | GACAACCACTCTGCAACATTCCTGAGAATTGAAGAATATAATCTTGAAAGTCAGGTCTGCACTATGGCATaGTTAGTGGAGTTCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DNHSATFLRIEEYNLESQVCTMA*LVEFRW Trigger: CCACCTGAACTCCACTAACCATGCCATAGTGCAGAC...CTGACTTTCAAGATTATATTCTTCAATTCTCAGGAATGTTGCAGAGTGGTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CCA 90 bp | GACAACCACTCTGCAACATTCCTGAGAATTGAAGAATATAATCTTGAAAGTCAGATATTAATTCGGTGCTaGAAACTACTGTTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DNHSATFLRIEEYNLESQILIRC*KLLFPK Trigger: TTTGGGAAACAGTAGTTTCCAGCACCGAATTAATAT...CTGACTTTCAAGATTATATTCTTCAATTCTCAGGAATGTTGCAGAGTGGTTGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 90 bp | CAAGGGTCGGCTGGATGCCGCGGCGAACTTCTTGCGGCCCAGCTCTaGAATGAGGCCGGCCGCGCCGCCCAGGAGGACCTGGGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGSAGCRGELLAAQL*NEAGRAAQEDLGKQ Trigger: CTGCTTCCCCAGGTCCTCCTGGGCGGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGCCGACCCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 90 bp | GTCGGCTGGATGCCGCGGCGAACTTCTTGCGGCCCAGCTCTGGAATaGGGCCGGCCGCGCCGCCCAGGAGGACCTGGGGAAGCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: VGWMPRRTSCGPALE*GRPRRPGGPGEAAT Trigger: TGTTGCTGCTTCCCCAGGTCCTCCTGGGCGGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGCCGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 90 bp | GAAGTTCCTCCACGGCTTCTTCGTGATGGAAGCTGCGCACGGTGTTaGCGCGGCTGGCTGCCCTCTCCAGCCGGTGGTCTGGGGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVPPRLLRDGSCARC*RGWLPSPAGGLGRA Trigger: CGCCCGCCCCAGACCACCGGCTGGAGAGGGCAGCCAGCCGCGCCAACACCGTGCGCAGCTTCCATCACGAAGAAGCCGTGGAGGAACTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS GCA 90 bp | TTCGCTGAGGACGTCTTCCGAAGGCCGGGACAAGGGTCGGCTGGATaGCGCGGCGAACTTCTTGCGGCCCAGCTCTGGAATGAGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FAEDVFRRPGQGSAG*RGELLAAQLWNEAG Trigger: GCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGCCGACCCTTGTCCCGGCCTTCGGAAGACGTCCTCAGCGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 90 bp | ACACCTGGGTTCTCCTCTAAATGGGCCACTTCCACCACAAACCCATaGTTGGTGTGTCCCTGTGTGGTCCACCGCATCACAGCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPGFSSKWATSTTNP*LVCPCVVHRITAGV Trigger: CACCCCAGCTGTGATGCGGTGGACCACACAGGGACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGGAGAACCCAGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | AACAGGGTGCAGGCAGGAAACATATGCTCAATTTTGCTGCGTGTCAGGCAAATGAAGCTGCGCACGGTGTaGGCGCGGCTGGCTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NRVQAGNICSILLRVRQMKLRTV*ARLAAL Trigger: GAGGGCAGCCAGCCGCGCCAACACCGTGCGCAGCTT...CATTTGCCTGACACGCAGCAAAATTGAGCATATGTTTCCTGCCTGCACCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 90 bp | CATGGTTGGTGTGTCCCTGTGTGGTCCACCGCATCACAGCTGGGGTaGCGTCGAAGCTCTCCCACTGACTTGTGTTCTGATTCACTAACC | + |
|
Preference number: 5 (lower is better) Translates to: HGWCVPVWSTASQLG*RRSSPTDLCSDSLT Trigger: GGTTAGTGAATCAGAACACAAGTCAGTGGGAGAGCTTCGACGTCACCCCAGCTGTGATGCGGTGGACCACACAGGGACACACCAACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 90 bp | CTAATCCTCACATGTCTCTTGGAGACACCTGGGTTCTCCTCTAAATaGGCCACTTCCACCACAAACCCATGGTTGGTGTGTCCCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LILTCLLETPGFSSK*ATSTTNPWLVCPCV Trigger: CACACAGGGACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGGAGAACCCAGGTGTCTCCAAGAGACATGTGAGGATTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | ATTCCCCCTAATAAGAATGAAAGTTCTCACGGATTGGACAACCACTCTGCAACAGCCGCGGCGAACTTCTaGCGGCCCAGCTCTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: IPPNKNESSHGLDNHSATAAANF*RPSSGM Trigger: CATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGC...TGTTGCAGAGTGGTTGTCCAATCCGTGAGAACTTTCATTCTTATTAGGGGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 90 bp | CTCTTGCAGCTGGACTTGAGGCGCTTCCGCTGTTTGTGTTTGGCTTaGCGCTTTTCTCGTTTGTGGAGCGGATGTCCTTTTCCATCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLQLDLRRFRCLCLA*RFSRLWSGCPFPSC Trigger: ACATGATGGAAAAGGACATCCGCTCCACAAACGAGAAAAGCGTCAAGCCAAACACAAACAGCGGAAGCGCCTCAAGTCCAGCTGCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGCAAGCTGACAGGTCAGAGAACAGGGTGCAGGCAGGAAACATATGCTACCACAAACCCATGGTaGGTGTGTCCCTGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KKSKLTGQRTGCRQETYATTNPW*VCPCVV Trigger: GACCACACAGGGACACACCAACCATGGGTTTGTGGT...AGCATATGTTTCCTGCCTGCACCCTGTTCTCTGACCTGTCAGCTTGCTTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS GCA 90 bp | GTCACTAGCAATGGCCTTATCTGTGACCAGCTGTGTTCATCTTGGTaGAAAGACCTGCTAATCCTCACATGTCTCTTGGAGACACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTSNGLICDQLCSSW*KDLLILTCLLETPG Trigger: CCCAGGTGTCTCCAAGAGACATGTGAGGATTAGCAGGTCTTTGCACCAAGATGAACACAGCTGGTCACAGATAAGGCCATTGCTAGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | GACAACCACTCTGCAACATTCCTGAGAATTGAAGAATATAATCTTGAAAGTCAGGGCACCACGACGTCCTaGCTGGGGGTGGGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DNHSATFLRIEEYNLESQGTTTS*LGVGLC Trigger: GCAGAGACCCACCCCCAGCAAGGACGTCGTGGTGCC...CTGACTTTCAAGATTATATTCTTCAATTCTCAGGAATGTTGCAGAGTGGTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGCTCTTGCAGCTGGACTaGAGGCGCTTCCGCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HMLNFAACQANVENWVLWLLQLD*RRFRCL Trigger: CAAACAGCGGAAGCGCCTCAAGTCCAGCTGCAAGAG...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 90 bp | AAACTACTGTTTCCCAAAGCTTCCTGTATCTGTTCCCGGAAGATCTaGAGTTCTGCAGATGTGAGAAACTCGTCACTGGGGACAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLFPKASCICSRKI*SSADVRNSSLGTEL Trigger: AAGTTCTGTCCCCAGTGACGAGTTTCTCACATCTGCAGAACTCCAGATCTTCCGGGAACAGATACAGGAAGCTTTGGGAAACAGTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 90 bp | AAAGTCACTAGCAATGGCCTTATCTGTGACCAGCTGTGTTCATCTTaGTGCAAAGACCTGCTAATCCTCACATGTCTCTTGGAGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: KVTSNGLICDQLCSS*CKDLLILTCLLETP Trigger: AGGTGTCTCCAAGAGACATGTGAGGATTAGCAGGTCTTTGCACCAAGATGAACACAGCTGGTCACAGATAAGGCCATTGCTAGTGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | GAGAAATATGTTCAAACACATATCCCTGGAAAGAAAAGCAAGCTGACAGGTCAGTACAAAGGGTGTCTCTaGCAGCTGGACTTGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EKYVQTHIPGKKSKLTGQYKGCL*QLDLRR Trigger: GCGCCTCAAGTCCAGCTGCAAGAGACACCCTTTGTA...CTGACCTGTCAGCTTGCTTTTCTTTCCAGGGATATGTGTTTGAACATATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | GAGAAATATGTTCAAACACATATCCCTGGAAAGAAAAGCAAGCTGACAGGTCAGGGGACAGAACTTAAATaGAAGAAGAAGCGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EKYVQTHIPGKKSKLTGQGTELK*KKKRRA Trigger: GGCCCGGCGCTTCTTCTTCAATTTAAGTTCTGTCCC...CTGACCTGTCAGCTTGCTTTTCTTTCCAGGGATATGTGTTTGAACATATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | GTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGAGAATAGAGAGATTGCTGATATCCTCACATGTCTCTaGGAGACACCTGGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSGKCRKLGALENREIADILTCL*ETPGFS Trigger: GGAGAACCCAGGTGTCTCCAAGAGACATGTGAGGAT...ATCAGCAATCTCTCTATTCTCCAAAGCACCCAATTTTCTACATTTGCCTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGCCAGCTGTGTTCATCTaGGTGCAAAGACCTGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HMLNFAACQANVENWVLWPAVFI*VQRPAN Trigger: ATTAGCAGGTCTTTGCACCAAGATGAACACAGCTGG...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | CATATGCTCAATTTTGCTGCGTGTCAGGCAAATGTAGAAAATTGGGTGCTTTGGCATGCCTTAGGGATTTaGGAATTCACAGAGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HMLNFAACQANVENWVLWHALGI*EFTEFT Trigger: GGTGAACTCTGTGAATTCCAAAATCCCTAAGGCATG...CCAAAGCACCCAATTTTCTACATTTGCCTGACACGCAGCAAAATTGAGCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS-3UTR CAA 90 bp | CGAGAGCTTTTCTATCAGATCAGTAATGTCTGGTTCTTATCCAAATATTCCCCCCTGTTTGTGTTTGGCTaGACGCTTTTCTCGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RELFYQISNVWFLSKYSPLFVFG*TLFSFV Trigger: CACAAACGAGAAAAGCGTCAAGCCAAACACAAACAG...GGGGGAATATTTGGATAAGAACCAGACATTACTGATCTGATAGAAAAGCTCTCG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 90 bp | TCCGAAGGCCGGGACAAGGGTCGGCTGGATGCCGCGGCGAACTTCTaGCGGCCCAGCTCTGGAATGAGGCCGGCCGCGCCGCCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SEGRDKGRLDAAANF*RPSSGMRPAAPPRR Trigger: CCTCCTGGGCGGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGCCGACCCTTGTCCCGGCCTTCGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | GCTGGATGCCGCGGCGAACTTCTTGCGGCCCAGCTCTaGAATGAGGCCGGCCGCGCCGCCCAGGAGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGCRGELLAAQL*NEAGRAAQEDL Trigger: CAGGTCCTCCTGGGCGGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 72 bp | CGGGACAAGGGTCGGCTGGATGCCGCGGCGAACTTCTaGCGGCCCAGCTCTGGAATGAGGCCGGCCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RDKGRLDAAANF*RPSSGMRPAAP Trigger: CGGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGCCGACCCTTGTCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 72 bp | ATGCCGCGGCGAACTTCTTGCGGCCCAGCTCTGGAATaGGGCCGGCCGCGCCGCCCAGGAGGACCTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: MPRRTSCGPALE*GRPRRPGGPGE Trigger: TTCCCCAGGTCCTCCTGGGCGGCGCGGCCGGCCTCATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | TCTGGAATGAGGCCGGCCGCGCCGCCCAGGAGGACCTaGGGAAGCAGCAACACTAGAAGACAGCGGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGMRPAAPPRRT*GSSNTRRQRVP Trigger: CGGGACCCGCTGTCTTCTAGTGTTGCTGCTTCCCCAGGTCCTCCTGGGCGGCGCGGCCGGCCTCATTCCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | CCACGGCTTCTTCGTGATGGAAGCTGCGCACGGTGTTaGCGCGGCTGGCTGCCCTCTCCAGCCGGTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRLLRDGSCARC*RGWLPSPAGGL Trigger: CAGACCACCGGCTGGAGAGGGCAGCCAGCCGCGCCAACACCGTGCGCAGCTTCCATCACGAAGAAGCCGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS GCA 72 bp | GACGTCTTCCGAAGGCCGGGACAAGGGTCGGCTGGATaGCGCGGCGAACTTCTTGCGGCCCAGCTCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: DVFRRPGQGSAG*RGELLAAQLWN Trigger: ATTCCAGAGCTGGGCCGCAAGAAGTTCGCCGCGGCATCCAGCCGACCCTTGTCCCGGCCTTCGGAAGACGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 90 bp | CCTGGGTTCTCCTCTAAATGGGCCACTTCCACCACAAACCCATGGTaGGTGTGTCCCTGTGTGGTCCACCGCATCACAGCTGGGGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: PGFSSKWATSTTNPW*VCPCVVHRITAGVT Trigger: CGTCACCCCAGCTGTGATGCGGTGGACCACACAGGGACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGGAGAACCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 72 bp | TGTGTCCCTGTGTGGTCCACCGCATCACAGCTGGGGTaGCGTCGAAGCTCTCCCACTGACTTGTGTTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CVPVWSTASQLG*RRSSPTDLCSD Trigger: ATCAGAACACAAGTCAGTGGGAGAGCTTCGACGTCACCCCAGCTGTGATGCGGTGGACCACACAGGGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | CCTCTAAATGGGCCACTTCCACCACAAACCCATGGTTaGTGTGTCCCTGTGTGGTCCACCGCATCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLNGPLPPQTHG*CVPVWSTASQL Trigger: CAGCTGTGATGCGGTGGACCACACAGGGACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | GAAGAAGAAGCGCCGGGCCGTTTTCCCACTCATCTCTaGAAGTTCCTCCACGGCTTCTTCGTGATGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EEEAPGRFPTHL*KFLHGFFVMEA Trigger: AGCTTCCATCACGAAGAAGCCGTGGAGGAACTTCCAGAGATGAGTGGGAAAACGGCCCGGCGCTTCTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 72 bp | TCCTCTAAATGGGCCACTTCCACCACAAACCCATGGTaGGTGTGTCCCTGTGTGGTCCACCGCATCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSKWATSTTNPW*VCPCVVHRITA Trigger: AGCTGTGATGCGGTGGACCACACAGGGACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | TTCTCCTCTAAATGGGCCACTTCCACCACAAACCCATaGTTGGTGTGTCCCTGTGTGGTCCACCGCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: FSSKWATSTTNP*LVCPCVVHRIT Trigger: TGTGATGCGGTGGACCACACAGGGACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 72 bp | AGTCCACATACAAAGGGTGTCTCTTGCAGCTGGACTTaGGGCGCTTCCGCTGTTTGTGTTTGGCTTGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPHTKGVSCSWT*GASAVCVWLDA Trigger: AGCGTCAAGCCAAACACAAACAGCGGAAGCGCCTCAAGTCCAGCTGCAAGAGACACCCTTTGTATGTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 72 bp | GCTGGACTTGAGGCGCTTCCGCTGTTTGTGTTTGGCTaGACGCTTTTCTCGTTTGTGGAGCGGATGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGLEALPLFVFG*TLFSFVERMSF Trigger: AAAGGACATCCGCTCCACAAACGAGAAAAGCGTCAAGCCAAACACAAACAGCGGAAGCGCCTCAAGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 72 bp | CCCACATCACTGAAGTCCACATACAAAGGGTGTCTCTaGCAGCTGGACTTGAGGCGCTTCCGCTGTTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PTSLKSTYKGCL*QLDLRRFRCLC Trigger: ACACAAACAGCGGAAGCGCCTCAAGTCCAGCTGCAAGAGACACCCTTTGTATGTGGACTTCAGTGATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 90 bp | TCTCTTGCAGCTGGACTTGAGGCGCTTCCGCTGTTTGTGTTTGGCTaGACGCTTTTCTCGTTTGTGGAGCGGATGTCCTTTTCCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLAAGLEALPLFVFG*TLFSFVERMSFSIM Trigger: CATGATGGAAAAGGACATCCGCTCCACAAACGAGAAAAGCGTCAAGCCAAACACAAACAGCGGAAGCGCCTCAAGTCCAGCTGCAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS TCA 72 bp | CTGGACTTGAGGCGCTTCCGCTGTTTGTGTTTGGCTTaGCGCTTTTCTCGTTTGTGGAGCGGATGTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LDLRRFRCLCLA*RFSRLWSGCPF Trigger: AAAAGGACATCCGCTCCACAAACGAGAAAAGCGTCAAGCCAAACACAAACAGCGGAAGCGCCTCAAGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | ACATGTCTCTTGGAGACACCTGGGTTCTCCTCTAAATaGGCCACTTCCACCACAAACCCATGGTTGGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TCLLETPGFSSK*ATSTTNPWLVC Trigger: ACACACCAACCATGGGTTTGTGGTGGAAGTGGCCCATTTAGAGGAGAACCCAGGTGTCTCCAAGAGACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 90 bp | CTGTGTTCATCTTGGTGCAAAGACCTGCTAATCCTCACATGTCTCTaGGAGACACCTGGGTTCTCCTCTAAATGGGCCACTTCCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: LCSSWCKDLLILTCL*ETPGFSSKWATSTT Trigger: TGTGGTGGAAGTGGCCCATTTAGAGGAGAACCCAGGTGTCTCCAAGAGACATGTGAGGATTAGCAGGTCTTTGCACCAAGATGAACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | TTTCCCAAAGCTTCCTGTATCTGTTCCCGGAAGATCTaGAGTTCTGCAGATGTGAGAAACTCGTCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FPKASCICSRKI*SSADVRNSSLG Trigger: CCCCAGTGACGAGTTTCTCACATCTGCAGAACTCCAGATCTTCCGGGAACAGATACAGGAAGCTTTGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 72 bp | TCTTGGTGCAAAGACCTGCTAATCCTCACATGTCTCTaGGAGACACCTGGGTTCTCCTCTAAATGGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SWCKDLLILTCL*ETPGFSSKWAT Trigger: AGTGGCCCATTTAGAGGAGAACCCAGGTGTCTCCAAGAGACATGTGAGGATTAGCAGGTCTTTGCACCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CAA 90 bp | AGTTCTGCAGATGTGAGAAACTCGTCACTGGGGACAGAACTTAAATaGAAGAAGAAGCGCCGGGCCGTTTTCCCACTCATCTCTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSADVRNSSLGTELK*KKKRRAVFPLISGS Trigger: ACTTCCAGAGATGAGTGGGAAAACGGCCCGGCGCTTCTTCTTCAATTTAAGTTCTGTCCCCAGTGACGAGTTTCTCACATCTGCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS GCA 72 bp | AATGGCCTTATCTGTGACCAGCTGTGTTCATCTTGGTaGAAAGACCTGCTAATCCTCACATGTCTCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NGLICDQLCSSW*KDLLILTCLLE Trigger: CTCCAAGAGACATGTGAGGATTAGCAGGTCTTTGCACCAAGATGAACACAGCTGGTCACAGATAAGGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
||
| CDS CCA 72 bp | AGCAATGGCCTTATCTGTGACCAGCTGTGTTCATCTTaGTGCAAAGACCTGCTAATCCTCACATGTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SNGLICDQLCSS*CKDLLILTCLL Trigger: CAAGAGACATGTGAGGATTAGCAGGTCTTTGCACCAAGATGAACACAGCTGGTCACAGATAAGGCCATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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| CDS CCA 72 bp | AGCTCTCCCACTGACTTGTGTTCTGATTCACTAACCTaGTGTCCAATAGTCTGGTCACAGGAAATTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSPTDLCSDSLT*CPIVWSQEISS Trigger: ACTTGAAATTTCCTGTGACCAGACTATTGGACACCAGGTTAGTGAATCAGAACACAAGTCAGTGGGAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028836.7 |
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