Pregenerated sensors for BMP15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023279Ensembl transcript IDs: ENSMUST00000024049.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCAAGGTTGTCTCCCAGAGACCTAAGCCCAGAAGAGCCCAACTaGACACATCAATCAAGTGAGCCCAGAATGAAGTCACCTCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: TARLSPRDLSPEEPN*THQSSEPRMKSPPG Trigger: TCCTGGAGGTGACTTCATTCTGGGCTCACTTGATTGATGTGTCCAGTTGGGCTCTTCTGGGCTTAGGTCTCTGGGAGACAACCTTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR TCA 90 bp | CAGAGACCTAAGCCCAGAAGAGCCCAACTGGACACATCAATCAAGTaGGCCCAGAATGAAGTCACCTCCAGGACTCCATATGTTCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: QRPKPRRAQLDTSIK*AQNEVTSRTPYVLL Trigger: TAGAAGAACATATGGAGTCCTGGAGGTGACTTCATTCTGGGCTCACTTGATTGATGTGTCCAGTTGGGCTCTTCTGGGCTTAGGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR TCA 90 bp | AAGACAGTAATACTAGAGCATTTTAAGGGAAACCATGCTGTGCTTTaGGATGGGAGGAGAGACAGCGACTTGAAACTGGTTGTCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: KTVILEHFKGNHAVL*DGRRDSDLKLVVMR Trigger: TCTCATGACAACCAGTTTCAAGTCGCTGTCTCTCCTCCCATCTCAAAGCACAGCATGGTTTCCCTTAAAATGCTCTAGTATTACTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTTGTCTCCCAGAGACCTAGCTTCTTGGGAAACCTaGGATAGCAACAACTTCACT | + |
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Preference number: 2 (lower is better) Translates to: KKELYTSSQTARLSPRDLASWET*DSNNFT Trigger: AGTGAAGTTGTTGCTATCTCAGGTTTCCCAAGAAGC...TAGGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGACAGAATCTGTAGGTTaGGTAGATCACTGCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VLLIHARIPAPETFLQAETESVG*VDHCQL Trigger: AAGCTGGCAGTGATCTACCCAACCTACAGATTCTGT...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR TCA 72 bp | AAGCCCAGAAGAGCCCAACTGGACACATCAATCAAGTaGGCCCAGAATGAAGTCACCTCCAGGACTCCATAT | + |
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Preference number: 3 (lower is better) Translates to: KPRRAQLDTSIK*AQNEVTSRTPY Trigger: ATATGGAGTCCTGGAGGTGACTTCATTCTGGGCTCACTTGATTGATGTGTCCAGTTGGGCTCTTCTGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR CCA 72 bp | TTGTCTCCCAGAGACCTAAGCCCAGAAGAGCCCAACTaGACACATCAATCAAGTGAGCCCAGAATGAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LSPRDLSPEEPN*THQSSEPRMKS Trigger: TGACTTCATTCTGGGCTCACTTGATTGATGTGTCCAGTTGGGCTCTTCTGGGCTTAGGTCTCTGGGAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCATCTTTTCTCAGTGAAGACAGTAATACTAGAGCATTTTAAGGGAAACCATTCCCAAACAGCAAGGTaGTCTCCCAGAGACCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: LHLFSVKTVILEHFKGNHSQTAR*SPRDLS Trigger: GCTTAGGTCTCTGGGAGACAACCTTGCTGTTTGGGA...ATGGTTTCCCTTAAAATGCTCTAGTATTACTGTCTTCACTGAGAAAAGATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTCCAGGACTCCATATGTTCTTCTACCATGGACCAGTATTTTCTTGATTTTTTGGGATCCTAGCATTTaGTTTATAGAGTACAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: TSRTPYVLLPWTSIFLIFWDPSI*FIEYKG Trigger: CCCTTTGTACTCTATAAACAAAATGCTAGGATCCCA...AAAAATCAAGAAAATACTGGTCCATGGTAGAAGAACATATGGAGTCCTGGAGGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGCAGCAAGGAGGGCGGTaGAGGGCCACCCTGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLLIHARIPAPETFLQAEQQGGR*RATLAL Trigger: CAAAGCCAGGGTGGCCCTCCACCGCCCTCCTTGCTG...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | TCAAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTTGTCTCCCAGAGACCCTAGTTGGTGGAAGCTaGCCTTGTAAGGATGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SRKSSILPPKQQGCLPETLVGGS*PCKDGG Trigger: CCCTCCATCCTTACAAGGTCAGCTTCCACCAACTAG...GGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGGGTGGAGGGCCACCCTaGCTTTGCCATTTGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: VLLIHARIPAPETFLQAEGGGPP*LCHLDP Trigger: AGGGTCCAAATGGCAAAGCCAGGGTGGCCCTCCACC...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| 3UTR CAA 72 bp | AAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTaGTCTCCCAGAGACCTAAGCCCAGAAGAGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: KKELYTSSQTAR*SPRDLSPEEPN Trigger: GTTGGGCTCTTCTGGGCTTAGGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGGAGGCCTTACTGTGTTaGCCGACGGCTTTACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLLIHARIPAPETFLQAEEALLC*PTALPA Trigger: GGCTGGTAAAGCCGTCGGCCAACACAGTAAGGCCTC...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | AAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTTGTCTCCCAGAGACCTAGCCGGACACTCCGCATaGGAAAAGAAGATTCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: KKELYTSSQTARLSPRDLAGHSA*EKKIPY Trigger: ATAGGGAATCTTCTTTTCTCATGCGGAGTGTCCGGC...TAGGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | TCAAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTTGTCTCCCAGAGACCCATGGTTGGGTGAATTaGGACCATAGGGTAATACCC | + |
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Preference number: 4 (lower is better) Translates to: SRKSSILPPKQQGCLPETHGWVN*DHRVIP Trigger: GGGTATTACCCTATGGTCTCAATTCACCCAACCATG...GGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | TCAAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTTGTCTCCCAGAGACCAAACCACAGTGGCTCTaGTTAGTTCGTATGCTACCT | + |
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Preference number: 4 (lower is better) Translates to: SRKSSILPPKQQGCLPETKPQWL*LVRMLP Trigger: AGGTAGCATACGAACTAATCAGAGCCACTGTGGTTT...GGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | AAAAATGATGTAATAATGTATCTCCAGAAAGCATCTTATCTCAGTATTGGGGGCCGTGCGGTTCTCCCTTaGATGGCCATGCGGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KNDVIMYLQKASYLSIGGRAVLP*MAMRVS Trigger: GCTGACCCGCATGGCCATCCAAGGGAGAACCGCACG...GCCCCCAATACTGAGATAAGATGCTTTCTGGAGATACATTATTACATCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR GCA 90 bp | TCAAGAAAGAGCTCTATACTTCCTCCCAAACAGCAAGGTTGTCTCCCAGAGACCTTAGAAGAAGGTAAGTaGTTGGTCCGGCATTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SRKSSILPPKQQGCLPETLEEGK*LVRHLG Trigger: TCCTAAATGCCGGACCAAGCACTTACCTTCTTCTAA...GGTCTCTGGGAGACAACCTTGCTGTTTGGGAGGAAGTATAGAGCTCTTTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | CTCCATCTTTTCTCAGTGAAGACAGTAATACTAGAGCATTTTAAGGGAAACCATGGAGCAATGATCCAGTaGTCCCAGCCTAGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LHLFSVKTVILEHFKGNHGAMIQ*SQPSWW Trigger: CCACCAACTAGGCTGGGATCACTGGATCATTGCTCC...ATGGTTTCCCTTAAAATGCTCTAGTATTACTGTCTTCACTGAGAAAAGATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR GCA 90 bp | AAAAATGATGTAATAATGTATCTCCAGAAAGCATCTTATCTCAGTATTGGGGGCTCCAGGGTCTGTACATaGCAGGAACCTCTGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KNDVIMYLQKASYLSIGGSRVCT*QEPLGG Trigger: GCCTCCCAGAGGTTCCTGGCATGTACAGACCCTGGA...GCCCCCAATACTGAGATAAGATGCTTTCTGGAGATACATTATTACATCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTTTAACACAGTTTTCTTTAAACATCTATAGCTTCTTGGGAAACCTGTGCCAGGGGCTTCTTTaGCCAGATCCAAAATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPALTQFSLNIYSFLGNLCQGLL*PDPKLR Trigger: CCTCAATTTTGGATCTGGCCAAAGAAGCCCCTGGCA...CAGGTTTCCCAAGAAGCTATAGATGTTTAAAGAAAACTGTGTTAAAGCTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | CTCCATCTTTTCTCAGTGAAGACAGTAATACTAGAGCATTTTAAGGGAAACCATGACCCATCATGTTCCTaGGAAGGACAAGAGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: LHLFSVKTVILEHFKGNHDPSCS*EGQEAS Trigger: TGATGCCTCTTGTCCTTCTCAGGAACATGATGGGTC...ATGGTTTCCCTTAAAATGCTCTAGTATTACTGTCTTCACTGAGAAAAGATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | CTGCCAGCTTTAACACAGTTTTCTTTAAACATCTATAGCTTCTTGGGAAACCTGTCATTGACAAGGCTCTaGATGATGGCATGGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LPALTQFSLNIYSFLGNLSLTRL*MMAWLG Trigger: ACCCAACCATGCCATCATTCAGAGCCTTGTCAATGA...CAGGTTTCCCAAGAAGCTATAGATGTTTAAAGAAAACTGTGTTAAAGCTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR GCA 90 bp | ACCTCCAGGACTCCATATGTTCTTCTACCATGGACCAGTATTTTCTTGATTTTTACTCACGAGTCTCATTaGCTTTTTGCTGCTGACACA | + |
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Preference number: 4 (lower is better) Translates to: TSRTPYVLLPWTSIFLIFTHESH*LFAADT Trigger: TGTGTCAGCAGCAAAAAGGCAATGAGACTCGTGAGT...AAAAATCAAGAAAATACTGGTCCATGGTAGAAGAACATATGGAGTCCTGGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTTTAACACAGTTTTCTTTAAACATCTATAGCTTCTTGGGAAACCTGGGATGGAGGGAACACTaGTTATTTACAGACCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LPALTQFSLNIYSFLGNLGWREH*LFTDPS Trigger: TGATGGGTCTGTAAATAACCAGTGTTCCCTCCATCC...CAGGTTTCCCAAGAAGCTATAGATGTTTAAAGAAAACTGTGTTAAAGCTGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTTTAACACAGTTTTCTTTAAACATCTATAGCTTCTTGGGAAACCTGCTACATGTACAGGACTaGGCAATCATACCCTCATAC | + |
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Preference number: 4 (lower is better) Translates to: LPALTQFSLNIYSFLGNLLHVQD*AIIPSY Trigger: GTATGAGGGTATGATTGCCCAGTCCTGTACATGTAG...CAGGTTTCCCAAGAAGCTATAGATGTTTAAAGAAAACTGTGTTAAAGCTGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CCA 90 bp | CTCCATCTTTTCTCAGTGAAGACAGTAATACTAGAGCATTTTAAGGGAAACCATTCAGTTAACTCCTCTTaGCCTCTTGCAAGAAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LHLFSVKTVILEHFKGNHSVNSS*PLARSL Trigger: TAAACTTCTTGCAAGAGGCCAAGAGGAGTTAACTGA...ATGGTTTCCCTTAAAATGCTCTAGTATTACTGTCTTCACTGAGAAAAGATGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR TCA 90 bp | AAAAATGATGTAATAATGTATCTCCAGAAAGCATCTTATCTCAGTATTGGGGGCTTCCAGAGCTTCTGCTaGATACAATGTGTAATATCT | + |
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Preference number: 4 (lower is better) Translates to: KNDVIMYLQKASYLSIGGFQSFC*IQCVIS Trigger: AGATATTACACATTGTATTCAGCAGAAGCTCTGGAA...GCCCCCAATACTGAGATAAGATGCTTTCTGGAGATACATTATTACATCATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 90 bp | TGTTGGCCGACGGCTTTACCAGCCTCACCATTTTCGCTCCAATCGTaGGGTTCTCCCTTGGATGGCCATGCGGGTCAGCCGAACGATGGT | + |
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Preference number: 5 (lower is better) Translates to: CWPTALPASPFSLQS*GSPLDGHAGQPNDG Trigger: ACCATCGTTCGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAAAATGGTGAGGCTGGTAAAGCCGTCGGCCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CCA 90 bp | GGGCAATGTAGGGTCGTCAGCAAGGAGGGCGGTGGAGGGCCACCCTaGCTTTGCCATTTGGACCCTCTGTTCCATAAAAAGCACCACTCC | + |
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Preference number: 5 (lower is better) Translates to: GQCRVVSKEGGGGPP*LCHLDPLFHKKHHS Trigger: GGAGTGGTGCTTTTTATGGAACAGAGGGTCCAAATGGCAAAGCCAGGGTGGCCCTCCACCGCCCTCCTTGCTGACGACCCTACATTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 90 bp | TGTAGGGTCGTCAGCAAGGAGGGCGGTGGAGGGCCACCCTGGCTTTaGCATTTGGACCCTCTGTTCCATAAAAAGCACCACTCCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: CRVVSKEGGGGPPWL*HLDPLFHKKHHSPQ Trigger: TTGTGGGGAGTGGTGCTTTTTATGGAACAGAGGGTCCAAATGGCAAAGCCAGGGTGGCCCTCCACCGCCCTCCTTGCTGACGACCCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 90 bp | GCCACCGGAACTCACGAGTCTCATTGCCTTTTTGCTGCTGACACATaGAGCGGAGGCGAAGAACACTCCGTCCCTTGCGATTCCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: ATGTHESHCLFAADT*SGGEEHSVPCDSRA Trigger: AGCTCTGGAATCGCAAGGGACGGAGTGTTCTTCGCCTCCGCTTCATGTGTCAGCAGCAAAAAGGCAATGAGACTCGTGAGTTCCGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 90 bp | CTCACCATTTTCGCTCCAATCGTGCGGTTCTCCCTTGGATGGCCATaGGGGTCAGCCGAACGATGGTATAACTTGAGCATGTACCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTIFAPIVRFSLGWP*GSAERWYNLSMYLR Trigger: CCTGAGGTACATGCTCAAGTTATACCATCGTTCGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAAAATGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CCA 90 bp | ACCAGCCTCACCATTTTCGCTCCAATCGTGCGGTTCTCCCTTGGATaGCCATGCGGGTCAGCCGAACGATGGTATAACTTGAGCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: TSLTIFAPIVRFSLG*PCGSAERWYNLSMY Trigger: GTACATGCTCAAGTTATACCATCGTTCGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAAAATGGTGAGGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 90 bp | GACATGGGAGAAGGCTTTGAGGAACCCGATTTAGAAGAAGGTAAGTaGTTGGTCCGGCATTTAGGAACCCAAGTTTCCACATGGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: DMGEGFEEPDLEEGK*LVRHLGTQVSTWQE Trigger: CTCCTGCCATGTGGAAACTTGGGTTCCTAAATGCCGGACCAAGCACTTACCTTCTTCTAAATCGGGTTCCTCAAAGCCTTCTCCCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGGGAGGCCTTACTGTGTaGGCCGACGGCTTTACCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLLIHARIPAPETFLQAEGGLTV*ADGFTS Trigger: GCTGGTAAAGCCGTCGGCCAACACAGTAAGGCCTCC...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | CTGCCAGCTTTAACACAGTTTTCTTTAAACATCTATAGCTTCTTGGGAAACCTGTCGTGCGGTTCTCCCTaGGATGGCCATGCGGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LPALTQFSLNIYSFLGNLSCGSP*DGHAGQ Trigger: CTGACCCGCATGGCCATCCAAGGGAGAACCGCACGA...CAGGTTTCCCAAGAAGCTATAGATGTTTAAAGAAAACTGTGTTAAAGCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 90 bp | CGGAGGCGAAGAACACTCCGTCCCTTGCGATTCCAGAGCTTCTGCTaGATACAATGTGTAATATCTATCTCTGTCCAGGCTTTAGACATG | + |
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Preference number: 5 (lower is better) Translates to: RRRRTLRPLRFQSFC*IQCVISISVQALDM Trigger: CATGTCTAAAGCCTGGACAGAGATAGATATTACACATTGTATTCAGCAGAAGCTCTGGAATCGCAAGGGACGGAGTGTTCTTCGCCTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGCATTGCTTCATCTCCTaGCCAGGGGCTTCTTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VLLIHARIPAPETFLQAEHCFIS*PGASLA Trigger: GGCCAAAGAAGCCCCTGGCAAGGAGATGAAGCAATG...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 90 bp | GGCCTCTTGCAAGAAGTTTACCCTGAACTCTGTCATCGGTGTCATTaGAATAGAGTAGCAAGAAGGCAACATCCAAGGATGTCATGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GLLQEVYPELCHRCH*NRVARRQHPRMSCH Trigger: ATGGCATGACATCCTTGGATGTTGCCTTCTTGCTACTCTATTTCAATGACACCGATGACAGAGTTCAGGGTAAACTTCTTGCAAGAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | GTTCTACTGATCCATGCTAGGATACCAGCACCAGAAACATTTTTACAAGCTGAGAGTCTCATTGCCTTTTaGCTGCTGACACATGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: VLLIHARIPAPETFLQAESLIAF*LLTHEA Trigger: CGCTTCATGTGTCAGCAGCAAAAAGGCAATGAGACT...CTCAGCTTGTAAAAATGTTTCTGGTGCTGGTATCCTAGCATGGATCAGTAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | CTCCATCTTTTCTCAGTGAAGACAGTAATACTAGAGCATTTTAAGGGAAACCATTTGCCAGGGGCTTCTTaGGCCAGATCCAAAATTGAG | + |
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Preference number: 5 (lower is better) Translates to: LHLFSVKTVILEHFKGNHLPGAS*ARSKIE Trigger: CTCAATTTTGGATCTGGCCAAAGAAGCCCCTGGCAA...ATGGTTTCCCTTAAAATGCTCTAGTATTACTGTCTTCACTGAGAAAAGATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | ACCTCCAGGACTCCATATGTTCTTCTACCATGGACCAGTATTTTCTTGATTTTTATACCCTCATACTCCTaGTACAAGATACTCCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: TSRTPYVLLPWTSIFLIFIPSYS*YKILPL Trigger: CAACGGGAGTATCTTGTACAAGGAGTATGAGGGTAT...AAAAATCAAGAAAATACTGGTCCATGGTAGAAGAACATATGGAGTCCTGGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS-3UTR CAA 90 bp | CTGCCAGCTTTAACACAGTTTTCTTTAAACATCTATAGCTTCTTGGGAAACCTGTTCCTTTACAGTAATTaGGGGTATAGAGACGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPALTQFSLNIYSFLGNLFLYSN*GYRDEE Trigger: CTCCTCGTCTCTATACCCCAAATTACTGTAAAGGAA...CAGGTTTCCCAAGAAGCTATAGATGTTTAAAGAAAACTGTGTTAAAGCTGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 72 bp | ACGGCTTTACCAGCCTCACCATTTTCGCTCCAATCGTaGGGTTCTCCCTTGGATGGCCATGCGGGTCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: TALPASPFSLQS*GSPLDGHAGQP Trigger: CGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAAAATGGTGAGGCTGGTAAAGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CCA 72 bp | AGGAGGGCGGTGGAGGGCCACCCTGGCTTTGCCATTTaGACCCTCTGTTCCATAAAAAGCACCACTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RRAVEGHPGFAI*TLCSIKSTTPH Trigger: GTGGGGAGTGGTGCTTTTTATGGAACAGAGGGTCCAAATGGCAAAGCCAGGGTGGCCCTCCACCGCCCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CCA 72 bp | AGGGTCGTCAGCAAGGAGGGCGGTGGAGGGCCACCCTaGCTTTGCCATTTGGACCCTCTGTTCCATAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: RVVSKEGGGGPP*LCHLDPLFHKK Trigger: CTTTTTATGGAACAGAGGGTCCAAATGGCAAAGCCAGGGTGGCCCTCCACCGCCCTCCTTGCTGACGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CCA 72 bp | GAGGAAAGTCCAGGGTCTGTACATGCCAGGAACCTCTaGGAGGCCTTACTGTGTTGGCCGACGGCTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: EESPGSVHARNL*EALLCWPTALP Trigger: TGGTAAAGCCGTCGGCCAACACAGTAAGGCCTCCCAGAGGTTCCTGGCATGTACAGACCCTGGACTTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CAA 72 bp | GCCTCACCATTTTCGCTCCAATCGTGCGGTTCTCCCTaGGATGGCCATGCGGGTCAGCCGAACGATGGTATA | + |
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Preference number: 6 (lower is better) Translates to: ASPFSLQSCGSP*DGHAGQPNDGI Trigger: TATACCATCGTTCGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAAAATGGTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 72 bp | CACCGGAACTCACGAGTCTCATTGCCTTTTTGCTGCTaGCACATGAAGCGGAGGCGAAGAACACTCCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: HRNSRVSLPFCC*HMKRRRRTLRP Trigger: GGGACGGAGTGTTCTTCGCCTCCGCTTCATGTGTCAGCAGCAAAAAGGCAATGAGACTCGTGAGTTCCGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 72 bp | TTCGCTCCAATCGTGCGGTTCTCCCTTGGATGGCCATaGGGGTCAGCCGAACGATGGTATAACTTGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: FAPIVRFSLGWP*GSAERWYNLSM Trigger: CATGCTCAAGTTATACCATCGTTCGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CAA 90 bp | GGATGTCATGCCATGCCACCGGAACTCACGAGTCTCATTGCCTTTTaGCTGCTGACACATGAAGCGGAGGCGAAGAACACTCCGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GCHAMPPELTSLIAF*LLTHEAEAKNTPSL Trigger: AAGGGACGGAGTGTTCTTCGCCTCCGCTTCATGTGTCAGCAGCAAAAAGGCAATGAGACTCGTGAGTTCCGGTGGCATGGCATGACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 72 bp | TGGTTTGATGCTAGAGGAAAGTCCAGGGTCTGTACATaGCAGGAACCTCTGGGAGGCCTTACTGTGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WFDARGKSRVCT*QEPLGGLTVLA Trigger: GGCCAACACAGTAAGGCCTCCCAGAGGTTCCTGGCATGTACAGACCCTGGACTTTCCTCTAGCATCAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CCA 72 bp | ACCATTTTCGCTCCAATCGTGCGGTTCTCCCTTGGATaGCCATGCGGGTCAGCCGAACGATGGTATAACTTG | + |
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Preference number: 6 (lower is better) Translates to: TIFAPIVRFSLG*PCGSAERWYNL Trigger: CAAGTTATACCATCGTTCGGCTGACCCGCATGGCCATCCAAGGGAGAACCGCACGATTGGAGCGAAAATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CAA 72 bp | GCCATGCCACCGGAACTCACGAGTCTCATTGCCTTTTaGCTGCTGACACATGAAGCGGAGGCGAAGAACACT | + |
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Preference number: 6 (lower is better) Translates to: AMPPELTSLIAF*LLTHEAEAKNT Trigger: AGTGTTCTTCGCCTCCGCTTCATGTGTCAGCAGCAAAAAGGCAATGAGACTCGTGAGTTCCGGTGGCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 72 bp | AGTAGCAAGAAGGCAACATCCAAGGATGTCATGCCATaGCACCGGAACTCACGAGTCTCATTGCCTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSKKATSKDVMP*HRNSRVSLPFC Trigger: GCAAAAAGGCAATGAGACTCGTGAGTTCCGGTGGCATGGCATGACATCCTTGGATGTTGCCTTCTTGCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CAA 90 bp | ATGGGAGAAGGCTTTGAGGAACCCGATTTAGAAGAAGGTAAGTGCTaGGTCCGGCATTTAGGAACCCAAGTTTCCACATGGCAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: MGEGFEEPDLEEGKC*VRHLGTQVSTWQER Trigger: TCTCTCCTGCCATGTGGAAACTTGGGTTCCTAAATGCCGGACCAAGCACTTACCTTCTTCTAAATCGGGTTCCTCAAAGCCTTCTCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS GCA 72 bp | AATAGAGTAGCAAGAAGGCAACATCCAAGGATGTCATaGCATGCCACCGGAACTCACGAGTCTCATTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: NRVARRQHPRMS*HATGTHESHCL Trigger: AAGGCAATGAGACTCGTGAGTTCCGGTGGCATGGCATGACATCCTTGGATGTTGCCTTCTTGCTACTCTATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CAA 72 bp | CATGTACAGGACTGGGCAATCATACCCTCATACTCCTaGTACAAGATACTCCCGTTGGTCTCAATCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: HVQDWAIIPSYS*YKILPLVSIRR Trigger: CCTCCTGATTGAGACCAACGGGAGTATCTTGTACAAGGAGTATGAGGGTATGATTGCCCAGTCCTGTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 72 bp | CTAGATGAAGTTGATGGCGGTAAACCACAGTGGCTCTaGTTAGTTCGTATGCTACCTGGTTTGATGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: LDEVDGGKPQWL*LVRMLPGLMLE Trigger: CTCTAGCATCAAACCAGGTAGCATACGAACTAATCAGAGCCACTGTGGTTTACCGCCATCAACTTCATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 72 bp | AGAACACTCCGTCCCTTGCGATTCCAGAGCTTCTGCTaGATACAATGTGTAATATCTATCTCTGTCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RTLRPLRFQSFC*IQCVISISVQA Trigger: AGCCTGGACAGAGATAGATATTACACATTGTATTCAGCAGAAGCTCTGGAATCGCAAGGGACGGAGTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 72 bp | CAGATTCAATGCTGCATGCTTGCCGGACACTCCGCATaGGAAAAGAAGATTCCCTATCAGTTAACTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QIQCCMLAGHSA*EKKIPYQLTPL Trigger: AAGAGGAGTTAACTGATAGGGAATCTTCTTTTCTCATGCGGAGTGTCCGGCAAGCATGCAGCATTGAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 72 bp | AGGGAACACTGGTTATTTACAGACCCATCATGTTCCTaGGAAGGACAAGAGGCATCAGATTCAATGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: REHWLFTDPSCS*EGQEASDSMLH Trigger: ATGCAGCATTGAATCTGATGCCTCTTGTCCTTCTCAGGAACATGATGGGTCTGTAAATAACCAGTGTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS TCA 72 bp | CAAGAAGTTTACCCTGAACTCTGTCATCGGTGTCATTaGAATAGAGTAGCAAGAAGGCAACATCCAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: QEVYPELCHRCH*NRVARRQHPRM Trigger: CATCCTTGGATGTTGCCTTCTTGCTACTCTATTTCAATGACACCGATGACAGAGTTCAGGGTAAACTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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| CDS CAA 72 bp | ATCATACCCTCATACTCCTTGTACAAGATACTCCCGTaGGTCTCAATCAGGAGGATGCTCATAGGAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: IIPSYSLYKILP*VSIRRMLIGRK Trigger: TTTTCTTCCTATGAGCATCCTCCTGATTGAGACCAACGGGAGTATCTTGTACAAGGAGTATGAGGGTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024049.8 |
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