Pregenerated sensors for BMI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026739Ensembl transcript IDs: ENSMUST00000028071.13, ENSMUST00000051929.13, ENSMUST00000134734.8, ENSMUST00000147365.2, ENSMUST00000150834.8, ENSMUST00000156284.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTaGACTGTGATATCCGCAAAGGTCGAACCCATTTGGAGAAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: NIKTNSVLVVSLSIG*TVISAKVEPIWRSL Trigger: TAAACTTCTCCAAATGGGTTCGACCTTTGCGGATATCACAGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR TCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTAATTGTTATTCACAGTaGCGTGGCTGCACAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: INIKTNSVLVVSLSIGCTNCYSQ*RGCTEC Trigger: GCATTCTGTGCAGCCACGTCACTGTGAATAACAATT...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTGAGATTAACAAACTATaGCCCAATGTCTACCCACTG | + |
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Preference number: 2 (lower is better) Translates to: INIKTNSVLVVSLSIGCTEINKL*PNVYPL Trigger: CAGTGGGTAGACATTGGGCCATAGTTTGTTAATCTC...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR CAA 90 bp | CCTCAGCATTGGGTGCACTGTGATATCCGCAAAGGTCGAACCCATTaGGAGAAGTTTACAACTGTTTTTGAATGCATGAAACACAATATT | + |
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Preference number: 2 (lower is better) Translates to: PQHWVHCDIRKGRTH*EKFTTVFECMKHNI Trigger: AATATTGTGTTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCGGATATCACAGTGCACCCAATGCTGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR CCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTCAAAAGGAAGCAAACTaGACGACAGTCACATGTATT | + |
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Preference number: 2 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSQKEAN*TTVTCI Trigger: AATACATGTGACTGTCGTCCAGTTTGCTTCCTTTTG...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR TCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTCACTTAACATCCATATaGAGTATCACATCTAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: INIKTNSVLVVSLSIGCTHLTSI*SITSSP Trigger: TGGACTAGATGTGATACTTCATATGGATGTTAAGTG...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAATTATTCACAGTGACGTaGCTGCACAGAATGCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: RKGRTHLEKFTTVFECMKLFTVT*LHRMQY Trigger: ATACTGCATTCTGTGCAGCCACGTCACTGTGAATAA...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTAAGGTCGAACCCATTTaGAGAAGTTTACAACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: INIKTNSVLVVSLSIGCTKVEPI*RSLQLF Trigger: AAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTT...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAATCCAGATCCAAACAGTaGTCACAGAAATCATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RKGRTHLEKFTTVFECMKSRSKQ*SQKSFH Trigger: GTGAAATGATTTCTGTGACCACTGTTTGGATCTGGA...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCAAAAGGAAGCAAACTaGACGACAGTCACATGTATT | + |
|
Preference number: 2 (lower is better) Translates to: LKVLLEKSQNYEDLPFASQKEAN*TTVTCI Trigger: AATACATGTGACTGTCGTCCAGTTTGCTTCCTTTTG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCACTTAACATCCATATaGAGTATCACATCTAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LKVLLEKSQNYEDLPFASHLTSI*SITSSP Trigger: TGGACTAGATGTGATACTTCATATGGATGTTAAGTG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR GCA 72 bp | ACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTaGACTGTGATATCCGCAAAGGTCGAACCCATTTGG | + |
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Preference number: 3 (lower is better) Translates to: TNSVLVVSLSIG*TVISAKVEPIW Trigger: CCAAATGGGTTCGACCTTTGCGGATATCACAGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR GCA 72 bp | AAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTaGCATTTGCTTCTAAGTGGAAAAGAATTTGAAACT | + |
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Preference number: 3 (lower is better) Translates to: KSYWRKARTMKI*HLLLSGKEFET Trigger: AGTTTCAAATTCTTTTCCACTTAGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTGCAAACAGGAAGAGGTaGAGGGAACACCTCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTANRKR*REHLRL Trigger: CAGCCGGAGGTGTTCCCTCCACCTCTTCCTGTTTGC...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTCTGGAGTGCTGGGACTaGGCAAACAGGAAGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTLECWD*ANRKRW Trigger: CCACCTCTTCCTGTTTGCCCAGTCCCAGCACTCCAG...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTGTGAGGAGACTGCACTaGAGTGCTGGGACTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTVRRLH*SAGTGQ Trigger: TTGCCCAGTCCCAGCACTCCAGTGCAGTCTCCTCAC...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAACTCCGGCTGGGCTGTTaGCCTTGTCACTCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKLRLGC*PCHSQS Trigger: ACTCTGGGAGTGACAAGGCCAACAGCCCAGCCGGAG...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAAGGGAACACCTCCGGCTaGGCTGTTGGCCTTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKGNTSG*AVGLVT Trigger: AGTGACAAGGCCAACAGCCCAGCCGGAGGTGTTCCC...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTCTTCATTGGAGCCATTaGCAGCATCAGCTGACGGGT | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSLHWSH*QHQLTG Trigger: ACCCGTCAGCTGATGCTGCCAATGGCTCCAATGAAG...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTCTTCATTGGAGCCATTaGCAGCATCAGCTGACGGGT | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTLHWSH*QHQLTG Trigger: ACCCGTCAGCTGATGCTGCCAATGGCTCCAATGAAG...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCTCCGGCTGGGCTGTTaGCCTTGTCACTCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASLRLGC*PCHSQS Trigger: ACTCTGGGAGTGACAAGGCCAACAGCCCAGCCGGAG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTGGGAACACCTCCGGCTaGGCTGTTGGCCTTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASGNTSG*AVGLVT Trigger: AGTGACAAGGCCAACAGCCCAGCCGGAGGTGTTCCC...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAAGCAAACAGGAAGAGGTaGAGGGAACACCTCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKANRKR*REHLRL Trigger: CAGCCGGAGGTGTTCCCTCCACCTCTTCCTGTTTGC...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTCACTGGGGCTGTTGCTaGTTCCATTCATGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTHWGCC*FHSWYW Trigger: CCAGTACCATGAATGGAACCAGCAACAGCCCCAGTG...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR GCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTCCTCTTCTCCTCATCTaGAACTTCTCCTCGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTPLLLI*NFSSVF Trigger: GAAGACCGAGGAGAAGTTGCAGATGAGGAGAAGAGG...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR GCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTGAGACTGCACTGGAGTaGTGGGACTGGGCAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASETALE*WDWANR Trigger: CCTGTTTGCCCAGTCCCAGCACTCCAGTGCAGTCTC...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAAACTGCACTGGAGTGCTaGGACTGGGCAAACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKTALEC*DWANRK Trigger: CTTCCTGTTTGCCCAGTCCCAGCACTCCAGTGCAGT...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTGTGAGGAGACTGCACTaGAGTGCTGGGACTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASVRRLH*SAGTGQ Trigger: TTGCCCAGTCCCAGCACTCCAGTGCAGTCTCCTCAC...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTGCAAAGGAAGATTGGTaGTTAGCACTGGGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSAKEDW*LALGLL Trigger: CAACAGCCCCAGTGCTAACCACCAATCTTCCTTTGC...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTACTGCACTGGAGTGCTaGGACTGGGCAAACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASTALEC*DWANRK Trigger: CTTCCTGTTTGCCCAGTCCCAGCACTCCAGTGCAGT...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAACTGGCAAAGGAAGATTaGTGGTTAGCACTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKLAKED*WLALGL Trigger: CAGCCCCAGTGCTAACCACCAATCTTCCTTTGCCAG...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTCCTTATGTTCAGGAGTaGTCTGGTTTTGTGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSPYVQE*SGFVNL Trigger: CAGGTTCACAAAACCAGACCACTCCTGAACATAAGG...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCTCCTCGGTCTTCATTaGAGCCATTGGCAGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASLLGLH*SHWQHQ Trigger: CTGATGCTGCCAATGGCTCCAATGAAGACCGAGGAG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTTGCTGGTTCCATTCATaGTACTGGAAATGTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSCWFHS*YWKCEG Trigger: TCCCTCACATTTCCAGTACCATGAATGGAACCAGCA...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCACTGGGGCTGTTGCTaGTTCCATTCATGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASHWGCC*FHSWYW Trigger: CCAGTACCATGAATGGAACCAGCAACAGCCCCAGTG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAAGCAAAGGAAGATTGGTaGTTAGCACTGGGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKAKEDW*LALGLL Trigger: CAACAGCCCCAGTGCTAACCACCAATCTTCCTTTGC...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTAGTGGTCTGGTTTTGTaGACCTGGACATCACAAATA | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSSGLVL*TWTSQI Trigger: TATTTGTGATGTCCAGGTTCACAAAACCAGACCACT...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR GCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCCTCTTCTCCTCATCTaGAACTTCTCCTCGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASPLLLI*NFSSVF Trigger: GAAGACCGAGGAGAAGTTGCAGATGAGGAGAAGAGG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR CAA 72 bp | TGGGTGCACTGTGATATCCGCAAAGGTCGAACCCATTaGGAGAAGTTTACAACTGTTTTTGAATGCATGAAA | + |
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Preference number: 4 (lower is better) Translates to: WVHCDIRKGRTH*EKFTTVFECMK Trigger: TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCGGATATCACAGTGCACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTGTTCCTCTTCATACATaGCGTCAATCTGGAAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTVPLHT*RQSGKY Trigger: ATACTTTCCAGATTGACGTCATGTATGAAGAGGAAC...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR GCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTTCATCTTCATTCTTTTaGAAGTTGGCCGAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSSSSFF*KLAELC Trigger: ACAGAGTTCGGCCAACTTGCAAAAGAATGAAGATGA...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTTCTTCATCTCATTTTTaGAAAGCCCTGGGACTAATT | + |
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Preference number: 4 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSSSSHF*KALGLI Trigger: AATTAGTCCCAGGGCTTTTCAAAAATGAGATGAAGA...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTTCTTCATCTCATTTTTaGAAAGCCCTGGGACTAATT | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTSSSHF*KALGLI Trigger: AATTAGTCCCAGGGCTTTTCAAAAATGAGATGAAGA...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCCTTATGTTCAGGAGTaGTCTGGTTTTGTGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASPYVQE*SGFVNL Trigger: CAGGTTCACAAAACCAGACCACTCCTGAACATAAGG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTCAATCTGGAAAGTATTaGGTATGTCCATTTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: INIKTNSVLVVSLSIGCTQSGKY*VCPFYS Trigger: GGAGTAAAATGGACATACCCAATACTTTCCAGATTG...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAATTCCATTCATGGTACTaGAAATGTGAGGGAACTGTG | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKFHSWY*KCEGTV Trigger: CACAGTTCCCTCACATTTCCAGTACCATGAATGGAA...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAAATTTTCGAGGTCTACTaGCAAAGGAAGATTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKIFEVY*QRKIGG Trigger: ACCACCAATCTTCCTTTGCCAGTAGACCTCGAAAAT...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTAGTGGTCTGGTTTTGTaGACCTGGACATCACAAATA | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASSGLVL*TWTSQI Trigger: TATTTGTGATGTCCAGGTTCACAAAACCAGACCACT...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCGATCCAATCTGCTCTaGTCAAAGAACTCAATAGAC | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASRSNLL*SKNSID Trigger: GTCTATTGAGTTCTTTGATCAGAGCAGATTGGATCG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR TCA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAAGTTCCTCTTCATACATaGCGTCAATCTGGAAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: RKGRTHLEKFTTVFECMKVPLHT*RQSGKY Trigger: ATACTTTCCAGATTGACGTCATGTATGAAGAGGAAC...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR GCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTTCATCTTCATTCTTTTaGAAGTTGGCCGAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASSSSFF*KLAELC Trigger: ACAGAGTTCGGCCAACTTGCAAAAGAATGAAGATGA...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCAATCTGGAAAGTATTaGGTATGTCCATTTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASQSGKY*VCPFYS Trigger: GGAGTAAAATGGACATACCCAATACTTTCCAGATTG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCATTCTTTTGCAAGTTaGCCGAACTCTGTATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKVLLEKSQNYEDLPFASHSFAS*PNSVFQ Trigger: TTGAAATACAGAGTTCGGCCAACTTGCAAAAGAATG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| 3UTR CAA 72 bp | TATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTaGCTTCTAAGTGGAAAAGAATTTGAAACTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: YWRKARTMKICH*LLSGKEFETGY Trigger: ATAACCAGTTTCAAATTCTTTTCCACTTAGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS CCA 90 bp | GAGGAGACTGCACTGGAGTGCTGGGACTGGGCAAACAGGAAGAGGTaGAGGGAACACCTCCGGCTGGGCTGTTGGCCTTGTCACTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EETALECWDWANRKR*REHLRLGCWPCHSQ Trigger: CTGGGAGTGACAAGGCCAACAGCCCAGCCGGAGGTGTTCCCTCCACCTCTTCCTGTTTGCCCAGTCCCAGCACTCCAGTGCAGTCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTCCTCCGGCTGGGCTGTaGGCCTTGTCACTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSPPAGL*ALSLPE Trigger: CTCTGGGAGTGACAAGGCCAACAGCCCAGCCGGAGG...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTGCTGGGCTGTTGGCCTaGTCACTCCCAGAGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSAGLLA*SLPESL Trigger: AAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGC...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTTCTCCTCGGTCTTCATaGGAGCCATTGGCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSSPRSS*EPLAAS Trigger: TGATGCTGCCAATGGCTCCAATGAAGACCGAGGAGA...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTACTGGCAAAGGAAGATaGGTGGTTAGCACTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSTGKGR*VVSTGA Trigger: AGCCCCAGTGCTAACCACCAATCTTCCTTTGCCAGT...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTGCTGGGCTGTTGGCCTaGTCACTCCCAGAGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LKVLLEKSQNYEDLPFASAGLLA*SLPESL Trigger: AAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGC...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTTTAGCACTGGGGCTGTaGCTGGTTCCATTCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: INIKTNSVLVVSLSIGCTLALGL*LVPFMV Trigger: TACCATGAATGGAACCAGCAACAGCCCCAGTGCTAA...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTTCTTCATTGGAGCCATaGGCAGCATCAGCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVLLEKSQNYEDLPFASSSLEP*AASADG Trigger: CCCGTCAGCTGATGCTGCCAATGGCTCCAATGAAGA...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTTCTCCTCGGTCTTCATaGGAGCCATTGGCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LKVLLEKSQNYEDLPFASSPRSS*EPLAAS Trigger: TGATGCTGCCAATGGCTCCAATGAAGACCGAGGAGA...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTCTCATCTTCATTCTTTaGCAAGTTGGCCGAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSLIFIL*QVGRTL Trigger: CAGAGTTCGGCCAACTTGCAAAAGAATGAAGATGAG...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTTTTAGCTCAGTGATCTaGATTCTGGTTGTTCGATGC | + |
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Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSFSSVI*ILVVRC Trigger: GCATCGAACAACCAGAATCAAGATCACTGAGCTAAA...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTTTAGCACTGGGGCTGTaGCTGGTTCCATTCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: LKVLLEKSQNYEDLPFASLALGL*LVPFMV Trigger: TACCATGAATGGAACCAGCAACAGCCCCAGTGCTAA...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTTCATTCTTTTGCAAGTaGGCCGAACTCTGTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: INIKTNSVLVVSLSIGCTSFFCK*AELCIS Trigger: TGAAATACAGAGTTCGGCCAACTTGCAAAAGAATGA...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ACAAACTATGGCCCAATGTCTACCCACTGTAGAACATTTCCAGATCCAAACAGTTCATTCTTTTGCAAGTaGGCCGAACTCTGTATTTCA | + |
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Preference number: 5 (lower is better) Translates to: TNYGPMSTHCRTFPDPNSSFFCK*AELCIS Trigger: TGAAATACAGAGTTCGGCCAACTTGCAAAAGAATGA...ACTGTTTGGATCTGGAAATGTTCTACAGTGGGTAGACATTGGGCCATAGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAACTCATCTTCATTCTTTaGCAAGTTGGCCGAACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKGRTHLEKFTTVFECMKLIFIL*QVGRTL Trigger: CAGAGTTCGGCCAACTTGCAAAAGAATGAAGATGAG...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAATTTAGCTCAGTGATCTaGATTCTGGTTGTTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: RKGRTHLEKFTTVFECMKFSSVI*ILVVRC Trigger: GCATCGAACAACCAGAATCAAGATCACTGAGCTAAA...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | ATCAACATTAAAACAAATTCTGTGCTGGTGGTAAGCCTCAGCATTGGGTGCACTTCAATCTGGAAAGTATaGGGTATGTCCATTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: INIKTNSVLVVSLSIGCTSIWKV*GMSILL Trigger: GAGTAAAATGGACATACCCAATACTTTCCAGATTGA...AGTGCACCCAATGCTGAGGCTTACCACCAGCACAGAATTTGTTTTAATGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | CGCAAAGGTCGAACCCATTTGGAGAAGTTTACAACTGTTTTTGAATGCATGAAACTCTTCATCTCATTTTaGAAAAGCCCTGGGACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RKGRTHLEKFTTVFECMKLFISF*KSPGTN Trigger: ATTAGTCCCAGGGCTTTTCAAAAATGAGATGAAGAG...TTTCATGCATTCAAAAACAGTTGTAAACTTCTCCAAATGGGTTCGACCTTTGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTCTCTTCATCTCATTTTaGAAAAGCCCTGGGACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKVLLEKSQNYEDLPFASLFISF*KSPGTN Trigger: ATTAGTCCCAGGGCTTTTCAAAAATGAGATGAAGAG...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCTTATTGGAGAAAAGCCAGAACTATGAAGATCTGCCATTTGCTTCTTCAATCTGGAAAGTATaGGGTATGTCCATTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LKVLLEKSQNYEDLPFASSIWKV*GMSILL Trigger: GAGTAAAATGGACATACCCAATACTTTCCAGATTGA...AGAAGCAAATGGCAGATCTTCATAGTTCTGGCTTTTCTCCAATAAGACTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS CCA 72 bp | GCACTGGAGTGCTGGGACTGGGCAAACAGGAAGAGGTaGAGGGAACACCTCCGGCTGGGCTGTTGGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALECWDWANRKR*REHLRLGCWPC Trigger: ACAAGGCCAACAGCCCAGCCGGAGGTGTTCCCTCCACCTCTTCCTGTTTGCCCAGTCCCAGCACTCCAGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS CAA 72 bp | GAGGTGGAGGGAACACCTCCGGCTGGGCTGTTGGCCTaGTCACTCCCAGAGTCACTTTCCAGCTCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EVEGTPPAGLLA*SLPESLSSSPA Trigger: TGCTGGAGAGCTGGAAAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGCCGGAGGTGTTCCCTCCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS CAA 72 bp | CAGGAAGAGGTGGAGGGAACACCTCCGGCTGGGCTGTaGGCCTTGTCACTCCCAGAGTCACTTTCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QEEVEGTPPAGL*ALSLPESLSSS Trigger: AGAGCTGGAAAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGCCGGAGGTGTTCCCTCCACCTCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 |
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| CDS TCA 72 bp | TTATCTGACCTTATGTTCAGGAGTGGTCTGGTTTTGTaGACCTGGACATCACAAATAGGACAATACTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSDLMFRSGLVL*TWTSQIGQYLL Trigger: CAGCAAGTATTGTCCTATTTGTGATGTCCAGGTTCACAAAACCAGACCACTCCTGAACATAAGGTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 ENSMUST00000134734.8 ENSMUST00000147365.2 ENSMUST00000150834.8 ENSMUST00000156284.8 |
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| CDS TCA 72 bp | CAATCTGGAAAGTATTGGGTATGTCCATTTTACTCCTaGGAAACTTTCTCAAGTGCATCACAGTCATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSGKYWVCPFYS*ETFSSASQSLL Trigger: CAGCAATGACTGTGATGCACTTGAGAAAGTTTCTCAGGAGTAAAATGGACATACCCAATACTTTCCAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028071.13 ENSMUST00000051929.13 ENSMUST00000156284.8 |
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