Pregenerated sensors for BMF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040093Ensembl transcript IDs: ENSMUST00000090219.13, ENSMUST00000110859.3, ENSMUST00000125860.3
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCCACTCCCTGCCATGCTCAGTGTTGGGCTTGCGTTTCGCCACTaGGGCAGCAAGGCAGGCCAGCGGGGCCTCTCTGGGCTCTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: HPLPAMLSVGLAFRH*GSKAGQRGLSGLWK Trigger: TTTCCAGAGCCCAGAGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTGAGCATGGCAGGGAGTGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 90 bp | TTGGCTAGACTGTCCCCAACACCCACTCCCTGCCATGCTCAGTGTTaGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: LARLSPTPTPCHAQC*ACVSPLGQQGRPAG Trigger: CCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTGAGCATGGCAGGGAGTGGGTGTTGGGGACAGTCTAGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR TCA 90 bp | ATGTGCAGCCTAGAGAGCAGGGCACAGGCTGGACCTCAGCCTCTATaGGCCCCCTCTGTCGGTAGCCTTGGCAGGGAGAAACCTGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: MCSLESRAQAGPQPL*APSVGSLGREKPAQ Trigger: TTGGGCAGGTTTCTCCCTGCCAAGGCTACCGACAGAGGGGGCTCATAGAGGCTGAGGTCCAGCCTGTGCCCTGCTCTCTAGGCTGCACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR TCA 90 bp | TTCCCACGCCCCCAGCAAGCCCACCCCATCTCCAAGTGCTTCTGCTaGGATGGATGCAGACAGATCCAGTCCAGTCATTGGCAGGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: FPRPQQAHPISKCFC*DGCRQIQSSHWQGL Trigger: AAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCATCTCAGCAGAAGCACTTGGAGATGGGGTGGGCTTGCTGGGGGCGTGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CCA 90 bp | AGAGCTGACAAAGGCACAGGCCGCTGGGTACAACGGCATGGTGACTaGCTACTTGGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: RADKGTGRWVQRHGD*LLGSSKGGSSLHPW Trigger: CCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCCAAGTAGCCAGTCACCATGCCGTTGTACCCAGCGGCCTGTGCCTTTGTCAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CCA 90 bp | CCAATTAAAGCAAGCAGCCAGGGGGAACCTCTTGCCTCCTTGAGCTaGGCTGCCAGCTGCCTCCAAGAGGTTGGAGAGAGGGGGCATATT | + |
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Preference number: 1 (lower is better) Translates to: PIKASSQGEPLASLS*AASCLQEVGERGHI Trigger: AATATGCCCCCTCTCTCCAACCTCTTGGAGGCAGCTGGCAGCCCAGCTCAAGGAGGCAAGAGGTTCCCCCTGGCTGCTTGCTTTAATTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 90 bp | ACGCCCCCAGCAAGCCCACCCCATCTCCAAGTGCTTCTGCTGAGATaGATGCAGACAGATCCAGTCCAGTCATTGGCAGGGTCTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: TPPASPPHLQVLLLR*MQTDPVQSLAGSSE Trigger: TTCAGAAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCATCTCAGCAGAAGCACTTGGAGATGGGGTGGGCTTGCTGGGGGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CCA 90 bp | GACTGGCTACTTGGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTaGGGACCAATCAAGGGGCTTCCATGTAGGACCGAGTCAGACTTG | + |
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Preference number: 1 (lower is better) Translates to: DWLLGSSKGGSSLHP*GPIKGLPCRTESDL Trigger: CAAGTCTGACTCGGTCCTACATGGAAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCCAAGTAGCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR TCA 90 bp | AAAGCTCAGAATATTCTCCTCGCTGACCAGGCAGGACTGTCACAGTaGCCTCACTGCTTAGTTCCTGGAAAGCTTGGGACAGACAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: KAQNILLADQAGLSQ*PHCLVPGKLGTDRG Trigger: GCCCCTGTCTGTCCCAAGCTTTCCAGGAACTAAGCAGTGAGGTCACTGTGACAGTCCTGCCTGGTCAGCGAGGAGAATATTCTGAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR GCA 90 bp | TCCCGGCTTGGCCCAAAATGGAGACAGTACATTCTGACCAGCTTCTaGCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: SRLGPKWRQYILTSF*LVQAQCSGQTLGSV Trigger: AACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGCTGGTCAGAATGTACTGTCTCCATTTTGGGCCAAGCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CCA 90 bp | TGGGGTGGACATCAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTaGGGTCACAGACCTCATAGCACCTTGGCCAAAGCTGGCATATAT | + |
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Preference number: 1 (lower is better) Translates to: WGGHQTTVEKGAVQA*GHRPHSTLAKAGIY Trigger: ATATATGCCAGCTTTGGCCAAGGTGCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTGATGTCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 90 bp | AGCCTCTCAAGTTTGATTCATTTTGTGGCACCTTTGAGGGGTTCTTaGAGAAGTCCGACCCTCCCTGAGGTCTTCCGGAAGTTGACAGCG | + |
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Preference number: 1 (lower is better) Translates to: SLSSLIHFVAPLRGS*RSPTLPEVFRKLTA Trigger: CGCTGTCAACTTCCGGAAGACCTCAGGGAGGGTCGGACTTCTCCAAGAACCCCTCAAAGGTGCCACAAAATGAATCAAACTTGAGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR TCA 90 bp | AGTAAGTTTGGTCCCGGCTTGGCCCAAAATGGAGACAGTACATTCTaGCCAGCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: SKFGPGLAQNGDSTF*PASAWSRLNVQVKL Trigger: GAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGCTGGTCAGAATGTACTGTCTCCATTTTGGGCCAAGCCGGGACCAAACTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR GCA 90 bp | CTTCATAGCAGCCACAGTGGCCACTGTACTGATTCCCCCAAATCCTaGAGAGCCACGAAGGCTGATGTCTTGTTACTCCATACACTGGTA | + |
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Preference number: 1 (lower is better) Translates to: LHSSHSGHCTDSPKS*RATKADVLLLHTLV Trigger: TACCAGTGTATGGAGTAACAAGACATCAGCCTTCGTGGCTCTGCAGGATTTGGGGGAATCAGTACAGTGGCCACTGTGGCTGCTATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 90 bp | AAGTTTCACCCTGGCTTGCCTGAGTTAGTAAGTTTGGTCCCGGCTTaGCCCAAAATGGAGACAGTACATTCTGACCAGCTTCTGCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: KFHPGLPELVSLVPA*PKMETVHSDQLLPG Trigger: ACCAGGCAGAAGCTGGTCAGAATGTACTGTCTCCATTTTGGGCCAAGCCGGGACCAAACTTACTAACTCAGGCAAGCCAGGGTGAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR TCA 90 bp | GAAATGCCTCCTGGGGATTGTGAATTAGTAGAGCAGTTTGGCCCCTaGATACAGGGCTTCTGTTCCTCTAGGGCATTTCTACAGAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: EMPPGDCELVEQFGP*IQGFCSSRAFLQSF Trigger: AAAACTCTGTAGAAATGCCCTAGAGGAACAGAAGCCCTGTATTCAGGGGCCAAACTGCTCTACTAATTCACAATCCCCAGGAGGCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR TCA 90 bp | CCATGGTCTAAACATTGTCTGTTACTTCCAAAGTCACTTTTCAGCTaGCAAAGCCTCAGTCCTAGCTTCTTCCTGTATCCCGCTAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PWSKHCLLLPKSLFS*QSLSPSFFLYPARY Trigger: GTACCTAGCGGGATACAGGAAGAAGCTAGGACTGAGGCTTTGTCAGCTGAAAAGTGACTTTGGAAGTAACAGACAATGTTTAGACCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR TCA 90 bp | TATTTATTTATATTTTACAGTCCTGGGATCCATCCGAGGGTCTCTTaGCCGACAGGCAAGCCCTTTATCATTGAGCTTCAACTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: YLFIFYSPGIHPRVS*PTGKPFIIELQLQP Trigger: AGGCTGGAGTTGAAGCTCAATGATAAAGGGCTTGCCTGTCGGTCAAGAGACCCTCGGATGGATCCCAGGACTGTAAAATATAAATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR GCA 90 bp | CCCTCAGAACCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTTaGAAACAGAAACCCACTTTCTTAGCAGACGAACTATGGTATAGA | + |
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Preference number: 1 (lower is better) Translates to: PSEPVFIFITWVPSP*KQKPTFLADELWYR Trigger: TCTATACCATAGTTCGTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGTTCTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTGGAGACAGTACATTCTaGCCAGCTTCTGCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: QCWACVSPLGQQGRPAGPGDSTF*PASAWS Trigger: GGACCAGGCAGAAGCTGGTCAGAATGTACTGTCTCC...AGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTCTAGAAACCTGCCCAACTaGACACCCAGGAGATCCGGT | + |
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Preference number: 2 (lower is better) Translates to: VLGLRFATGAARQASGASRNLPN*TPRRSG Trigger: ACCGGATCTCCTGGGTGTCCAGTTGGGCAGGTTTCT...AGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGCTTTTCGTTCCCTCCCTGAGCACTGCAGCGGGGAGAGAAGGAAGGAGCAGTGGGATGGCTGCTaGGTTCCCACGCCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SAAFRSLPEHCSGERRKEQWDGC*VPTPPA Trigger: TGCTGGGGGCGTGGGAACCCAGCAGCCATCCCACTG...CTCCTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGAACGAAAAGCAGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTCTAGCACAGCCAAACTTTaGAACAGAGAGACAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VLGLRFATGAARQASGASSTAKL*NRETGP Trigger: TGGCCCTGTCTCTCTGTTTCAAAGTTTGGCTGTGCT...AGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTGTGCTTCTGCTGAGATaGATGCAGACAGATCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QCWACVSPLGQQGRPAGPVLLLR*MQTDPV Trigger: GACTGGATCTGTCTGCATCCATCTCAGCAGAAGCAC...AGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGGCCACAGGGTACCGGTGGGCGCTGGCTGTaGCAAGTGGGAACCCAGACG | + |
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Preference number: 2 (lower is better) Translates to: QAQCSGQTLGSVLRPQGTGGRWL*QVGTQT Trigger: CGTCTGGGTTCCCACTTGGCACAGCCAGCGCCCACC...GGTACCCTGTGGCCTGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTCTCAGCTAAGGTCCTGCTaGGTTCTAGAACTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: VLGLRFATGAARQASGASQLRSC*VLELSF Trigger: AAAGGAGAGTTCTAGAACCCAGCAGGACCTTAGCTG...AGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | GTGGGATGGCTGCTGGGTTCCCACGCCCCCAGCAAGCCCACCCCATCTCCAAGTTCTCAGTCCACTTCCTaGAGAACATCACCAACTGGT | + |
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Preference number: 2 (lower is better) Translates to: VGWLLGSHAPSKPTPSPSSQSTS*RTSPTG Trigger: ACCAGTTGGTGATGTTCTCCAGGAAGTGGACTGAGA...ACTTGGAGATGGGGTGGGCTTGCTGGGGGCGTGGGAACCCAGCAGCCATCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CAA 90 bp | ACAAAGGCACAGGCCGCTGGGTACAACGGCATGGTGACTGGCTACTaGGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTGGGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: TKAQAAGYNGMVTGY*APAKVAVVCTLGDQ Trigger: TTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCCAAGTAGCCAGTCACCATGCCGTTGTACCCAGCGGCCTGTGCCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | CAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTGGGGTCACAGACCTCATAGCACCCACTCCCTGCCATaGTCAGTGTTGGGCTTGCGT | + |
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Preference number: 2 (lower is better) Translates to: QTTVEKGAVQAWGHRPHSTHSLP*SVLGLR Trigger: ACGCAAGCCCAACACTGAGCATGGCAGGGAGTGGGT...GCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGCTTTTCGTTCCCTCCCTGAGCACTGCAGCGGGGAGAGAAGGAAGGAGTCCCAGACAGGGTCCTaGTGGGTTAAAGCCATGATC | + |
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Preference number: 2 (lower is better) Translates to: SAAFRSLPEHCSGERRKESQTGS*WVKAMI Trigger: GATCATGGCTTTAACCCACCAGGACCCTGTCTGGGA...CTCCTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGAACGAAAAGCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCAGCTTTGTTCTGCTGTCTTCCTTGAGGCTCTGTCCCCTAGGTCTGCAGAAACTGCAGGGAGGGTaGGATGTAGGAAGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ELSFVLLSSLRLCPLGLQKLQGG*DVGRLG Trigger: GCCCAGCCTTCCTACATCCCACCCTCCCTGCAGTTT...CTGCAGACCTAGGGGACAGAGCCTCAAGGAAGACAGCAGAACAAAGCTGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTGGGGGAGTCAGTGACGGGACTGGGGGATGTTCCTCTCCAGATCTGTTCAAGTCACTTTTCAGCTaGCAAAGCCTCAGTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LPGGVSDGTGGCSSPDLFKSLFS*QSLSPS Trigger: GCTAGGACTGAGGCTTTGTCAGCTGAAAAGTGACTT...GAACAGATCTGGAGAGGAACATCCCCCAGTCCCGTCACTGACTCCCCCAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTGCTTTTCGTTCCCTCCCTGAGCACTGCAGCGGGGAGAGAAGGAAGGAGACCAGCAGACACAGCTaGCTCTCCTTCAACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SAAFRSLPEHCSGERRKETSRHS*LSFNSV Trigger: AACACTGTTGAAGGAGAGGCAGCTGTGTCTGCTGGT...CTCCTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGAACGAAAAGCAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGCCCACATCAGGATGTaGAGCCTAGAGAGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASAWSRLNVQVKLWAQFSAHIRM*SLESRA Trigger: TGCCCTGCTCTCTAGGCTGCACATCCTGATGTGGGC...TGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAACTCTGGGCAGACCCTaGCCACATCAGGATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASAWSRLNVQVKLWAQFSTLGRP*PHQDVQ Trigger: CTGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGT...TGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | TTATCAGTGGGATGGCTGCTGGGTTCCCACGCCCCCAGCAAGCCCACCCCATCTATCCAGTCCAGTCATTaGCAGGGTCTTCTGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: LSVGWLLGSHAPSKPTPSIQSSH*QGLLKT Trigger: TGTTTTCAGAAGACCCTGCCAATGACTGGACTGGAT...AGATGGGGTGGGCTTGCTGGGGGCGTGGGAACCCAGCAGCCATCCCACTGATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGACCTCATAGCACCTTGGCCAAAGCTGGCATATATGGAAGAGCTCAGCTTTGGACCTCAGCCTCTATaGGCCCCCTCTGTCGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: TDLIAPWPKLAYMEELSFGPQPL*APSVGS Trigger: GCTACCGACAGAGGGGGCTCATAGAGGCTGAGGTCC...AAAGCTGAGCTCTTCCATATATGCCAGCTTTGGCCAAGGTGCTATGAGGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR TCA 90 bp | CAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTGGGGTCACAGACCTCATAGCGCCACTGGGGACAACTaGACAGCACAGCCAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: QTTVEKGAVQAWGHRPHSATGDN*TAQPNF Trigger: AAAGTTTGGCTGTGCTGTTCAGTTGTCCCCAGTGGC...GCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGGCCACAGGGTACCTCTGTCCTCCCAGACTaGATTCCTGGTGATCCATCC | + |
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Preference number: 2 (lower is better) Translates to: QAQCSGQTLGSVLRPQGTSVLPD*IPGDPS Trigger: GGATGGATCACCAGGAATGCAGTCTGGGAGGACAGA...GGTACCCTGTGGCCTGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | AACCCAGACGTGAATCGGGCTAGCCAAGGCACAGTTGATCTTAGCCAGGAGGCTTCTGTCCTCCCAGACTaGATTCCTGGTGATCCATCC | + |
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Preference number: 2 (lower is better) Translates to: NPDVNRASQGTVDLSQEASVLPD*IPGDPS Trigger: GGATGGATCACCAGGAATGCAGTCTGGGAGGACAGA...AGCCTCCTGGCTAAGATCAACTGTGCCTTGGCTAGCCCGATTCACGTCTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCATCCCTCCCTGAGCACTaGAGCGGGGAGAGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IRKDIPYSGQTLPTSGCASLPEH*SGERRK Trigger: CTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGA...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTGCCCACATCAGGATGTaGAGCCTAGAGAGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LYGEGHACTIKHMYCSTCAHIRM*SLESRA Trigger: TGCCCTGCTCTCTAGGCTGCACATCCTGATGTGGGC...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGCACACCACAAAAGCCTGTTGCCTTCAGCTGGTTACAGGTCACCACACACCTTTGAGGGGTTCTTaGAGAAGTCCGACCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PQHTTKACCLQLVTGHHTPLRGS*RSPTLP Trigger: AGGGAGGGTCGGACTTCTCCAAGAACCCCTCAAAGG...TGTGTGGTGACCTGTAACCAGCTGAAGGCAACAGGCTTTTGTGGTGTGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | TTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACTTTCTTAGCAGACCAGTGGGATGGCTGCTaGGTTCCCACGCCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FITWVPSPCKQKPTFLADQWDGC*VPTPPA Trigger: TGCTGGGGGCGTGGGAACCCAGCAGCCATCCCACTG...GTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTAAACTGCAGGGAGGGTaGGATGTAGGAAGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LYGEGHACTIKHMYCSTCKLQGG*DVGRLG Trigger: GCCCAGCCTTCCTACATCCCACCCTCCCTGCAGTTT...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTGGGGTCACAGACCTCATAGCAGACAGCCAAGCTCCTaGAGTTCTGGAGAGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QTTVEKGAVQAWGHRPHSRQPSS*SSGEAK Trigger: CTTTGCCTCTCCAGAACTCCAGGAGCTTGGCTGTCT...GCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTGGGGACCAATCAAGGGGCTTATTTTGTGGCACCTTTaGGGGGTTCTTGGAGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: GSSKGGSSLHPWGPIKGLILWHL*GVLGEV Trigger: GACTTCTCCAAGAACCCCTCAAAGGTGCCACAAAAT...AAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGCTCAGCTTTGTTCTGCTGTCTTCCTTGAGGCTCTGTCCCCTAGGTCTGCAGTTTTCCACCTCTGATTaGGCAAGACAAGGCCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: ELSFVLLSSLRLCPLGLQFSTSD*ARQGHW Trigger: CCAGTGGCCTTGTCTTGCTCAATCAGAGGTGGAAAA...CTGCAGACCTAGGGGACAGAGCCTCAAGGAAGACAGCAGAACAAAGCTGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR GCA 90 bp | ACAGACCTCATAGCACCTTGGCCAAAGCTGGCATATATGGAAGAGCTCAGCTTTTCCCTCCCTGAGCACTaGAGCGGGGAGAGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TDLIAPWPKLAYMEELSFSLPEH*SGERRK Trigger: CTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGA...AAAGCTGAGCTCTTCCATATATGCCAGCTTTGGCCAAGGTGCTATGAGGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCTCCCAGACAGGGTCCTaGTGGGTTAAAGCCATGATC | + |
|
Preference number: 2 (lower is better) Translates to: SFCLVQAQCSGQTLGSVLSQTGS*WVKAMI Trigger: GATCATGGCTTTAACCCACCAGGACCCTGTCTGGGA...GAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGTAGTTTGCACCCTTaGGGACCAATCAAGGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SFCLVQAQCSGQTLGSVLSSLHP*GPIKGL Trigger: AAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACT...GAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTACCCGCCCCCTCCCCAGTAAGTCCCAGAGCGGGAAAGCTCAGAATATTATCCAGTCCAGTCATTaGCAGGGTCTTCTGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: TGTRPLPSKSQSGKAQNIIQSSH*QGLLKT Trigger: TGTTTTCAGAAGACCCTGCCAATGACTGGACTGGAT...AATATTCTGAGCTTTCCCGCTCTGGGACTTACTGGGGAGGGGGCGGGTACCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CCA 90 bp | TTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACTTTCTTAGCAGACGAGCAGGGCACAGGCTaGACCTCAGCCTCTATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FITWVPSPCKQKPTFLADEQGTG*TSASMS Trigger: GCTCATAGAGGCTGAGGTCCAGCCTGTGCCCTGCTC...GTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CAA 90 bp | GGTTCTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATaGCAGCACATGTACCAAGCACATACCAGAAGCCTGCCTGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: GSVWGGARMYHQAHV*QHMYQAHTRSLPVI Trigger: TATGACAGGCAGGCTTCTGGTATGTGCTTGGTACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTTCCTTCAACAGTGTTTaGCAAAGGCCCCCATCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LYGEGHACTIKHMYCSTCSFNSV*QRPPSS Trigger: TGAGGATGGGGGCCTTTGTCAAACACTGTTGAAGGA...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCATCTCAGTCCACTTCCTaGAGAACATCACCAACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ASAWSRLNVQVKLWAQFSSQSTS*RTSPTG Trigger: ACCAGTTGGTGATGTTCTCCAGGAAGTGGACTGAGA...TGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTGTGCTTCTGCTGAGATaGATGCAGACAGATCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LYGEGHACTIKHMYCSTCVLLLR*MQTDPV Trigger: GACTGGATCTGTCTGCATCCATCTCAGCAGAAGCAC...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGCTTTTCGTTCCCTCCCTGAGCACTGCAGCGGGGAGAGAAGGAAGGAGGCTCTGCAGTTTCCATaGTCTAAACATTGTCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SAAFRSLPEHCSGERRKEALQFP*SKHCLL Trigger: TAACAGACAATGTTTAGACCATGGAAACTGCAGAGC...CTCCTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGAACGAAAAGCAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | CAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTGGGGTCACAGACCTCATAGCCTCCTCCAAAGTCCTTaGATAATCCTGTGTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QTTVEKGAVQAWGHRPHSLLQSP*IILCSS Trigger: AGAAGAACACAGGATTATTCAAGGACTTTGGAGGAG...GCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGGCCACAGGGTACCAAGATGTGTCAGCTCTaGAGTTTCCATGGTCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QAQCSGQTLGSVLRPQGTKMCQL*SFHGLN Trigger: GTTTAGACCATGGAAACTGCAGAGCTGACACATCTT...GGTACCCTGTGGCCTGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | ACCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACAGAAACCTGCCCAACTaGACACCCAGGAGATCCGGT | + |
|
Preference number: 2 (lower is better) Translates to: TSLHIHYLGPLSLQTETHRNLPN*TPRRSG Trigger: ACCGGATCTCCTGGGTGTCCAGTTGGGCAGGTTTCT...GTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCACCTTTCTGGCCTAGCTaGAAGCTAAAGGGAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: IRKDIPYSGQTLPTSGCAPFWPS*KLKGDS Trigger: TGAATCTCCCTTTAGCTTTCAGCTAGGCCAGAAAGG...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACCTCATAGCACCTTGGCCAAAGCTGGCATATATGGAAGAGCTCAGCTTTGCCTCCTGGGGATTGTaGATTAGTAGAGCAGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TDLIAPWPKLAYMEELSFASWGL*ISRAVW Trigger: CCAAACTGCTCTACTAATTCACAATCCCCAGGAGGC...AAAGCTGAGCTCTTCCATATATGCCAGCTTTGGCCAAGGTGCTATGAGGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CAA 90 bp | AAAAGAGGGTTTAAGTTTCACCCTGGCTTGCCTGAGTTAGTAAGTTaGGTCCCGGCTTGGCCCAAAATGGAGACAGTACATTCTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRGFKFHPGLPELVS*VPAWPKMETVHSDQ Trigger: CTGGTCAGAATGTACTGTCTCCATTTTGGGCCAAGCCGGGACCAAACTTACTAACTCAGGCAAGCCAGGGTGAAACTTAAACCCTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACTCCTTCAACAGTGTTTaGCAAAGGCCCCCATCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSLHIHYLGPLSLQTETHSFNSV*QRPPSS Trigger: TGAGGATGGGGGCCTTTGTCAAACACTGTTGAAGGA...GTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACTTTCTTAGCAGACACCAGCAGACACAGCTaGCTCTCCTTCAACAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FITWVPSPCKQKPTFLADTSRHS*LSFNSV Trigger: AACACTGTTGAAGGAGAGGCAGCTGTGTCTGCTGGT...GTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCAGACAGATCCAGTCCAGTCATTGGCAGGGTCTTCTGAAAACAGAGCTGAAGCCTCTCAAGTTTaGTTCATTTTGTGGCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: WMQTDPVQSLAGSSENRAEASQV*FILWHL Trigger: AAGGTGCCACAAAATGAATCAAACTTGAGAGGCTTC...AGCTCTGTTTTCAGAAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CAA 90 bp | CAAATAATCAAGCCCACCCTCAGAACCAGTCTTCATATTCATTACTaGGGTCCCCTCTCCTTGCAAACAGAAACCCACTTTCTTAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QIIKPTLRTSLHIHY*GPLSLQTETHFLSR Trigger: TCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGTTCTGAGGGTGGGCTTGATTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACGAAGCCTCTCAAGTTTaGTTCATTTTGTGGCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: TSLHIHYLGPLSLQTETHEASQV*FILWHL Trigger: AAGGTGCCACAAAATGAATCAAACTTGAGAGGCTTC...GTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACTTTCTTAGCAGACCACACAGTACCTTTGTaGAAATTAGGAAAGACATTC | + |
|
Preference number: 2 (lower is better) Translates to: FITWVPSPCKQKPTFLADHTVPL*KLGKTF Trigger: GAATGTCTTTCCTAATTTGCACAAAGGTACTGTGTG...GTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CCA 90 bp | ACCACTGAGAGTGCACACAGTACCTTTGTGCAAATTAGGAAAGACATTCCTTACTCTTTCTTTGAGCCTTaGCTCATCTTCATTATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TTESAHSTFVQIRKDIPYSFFEP*LIFIIA Trigger: TGCTATAATGAAGATGAGCCAAGGCTCAAAGAAAGA...GTAAGGAATGTCTTTCCTAATTTGCACAAAGGTACTGTGTGCACTCTCAGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR CCA 72 bp | CCTGCCATGCTCAGTGTTGGGCTTGCGTTTCGCCACTaGGGCAGCAAGGCAGGCCAGCGGGGCCTCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PAMLSVGLAFRH*GSKAGQRGLSG Trigger: CCCAGAGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTGAGCATGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR GCA 72 bp | CAGCCAGGGGGAACCTCTTGCCTCCTTGAGCTGGGCTaGCAGCTGCCTCCAAGAGGTTGGAGAGAGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPGGTSCLLELG*QLPPRGWREGA Trigger: TGCCCCCTCTCTCCAACCTCTTGGAGGCAGCTGGCAGCCCAGCTCAAGGAGGCAAGAGGTTCCCCCTGGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR GCA 72 bp | GCCAGCGGGGCCTCTCTGGGCTCTGGAAACAAGCTCTaGCACATAGCTCTGGACACAGCCCATCCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASGASLGSGNKL*HIALDTAHPLG Trigger: CCCCAGGGGATGGGCTGTGTCCAGAGCTATGTGGCAGAGCTTGTTTCCAGAGCCCAGAGAGGCCCCGCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 72 bp | GCAAGCAGCCAGGGGGAACCTCTTGCCTCCTTGAGCTaGGCTGCCAGCTGCCTCCAAGAGGTTGGAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASSQGEPLASLS*AASCLQEVGER Trigger: CCTCTCTCCAACCTCTTGGAGGCAGCTGGCAGCCCAGCTCAAGGAGGCAAGAGGTTCCCCCTGGCTGCTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 72 bp | GGCAGCAAGGCAGGCCAGCGGGGCCTCTCTGGGCTCTaGAAACAAGCTCTGCCACATAGCTCTGGACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSKAGQRGLSGL*KQALPHSSGHS Trigger: GCTGTGTCCAGAGCTATGTGGCAGAGCTTGTTTCCAGAGCCCAGAGAGGCCCCGCTGGCCTGCCTTGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR CCA 72 bp | CTGTCCCCAACACCCACTCCCTGCCATGCTCAGTGTTaGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSPTPTPCHAQC*ACVSPLGQQGR Trigger: CCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTGAGCATGGCAGGGAGTGGGTGTTGGGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTCTCCTGAGTTAGTAAGTTaGGTCCCGGCTTGGCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLGLRFATGAARQASGASPELVS*VPAWPK Trigger: TTTGGGCCAAGCCGGGACCAAACTTACTAACTCAGG...AGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR GCA 72 bp | GGGGCCTTGGCTAGACTGTCCCCAACACCCACTCCCTaGCATGCTCAGTGTTGGGCTTGCGTTTCGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GALARLSPTPTP*HAQCWACVSPL Trigger: CAGTGGCGAAACGCAAGCCCAACACTGAGCATGGCAGGGAGTGGGTGTTGGGGACAGTCTAGCCAAGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
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| 3UTR TCA 72 bp | CTAGAGAGCAGGGCACAGGCTGGACCTCAGCCTCTATaGGCCCCCTCTGTCGGTAGCCTTGGCAGGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LESRAQAGPQPL*APSVGSLGREK Trigger: TTTCTCCCTGCCAAGGCTACCGACAGAGGGGGCTCATAGAGGCTGAGGTCCAGCCTGTGCCCTGCTCTCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCCCTCTGTCGGTAGCCTaGGCAGGGAGAAACCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SFCLVQAQCSGQTLGSVLPLSVA*AGRNLP Trigger: GGGCAGGTTTCTCCCTGCCAAGGCTACCGACAGAGG...GAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | CTGTCGGTAGCCTTGGCAGGGAGAAACCTGCCCAACTaGACACCCAGGAGATCCGGTGCCCTTTTATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSVALAGRNLPN*TPRRSGALLWY Trigger: GTACCATAAAAGGGCACCGGATCTCCTGGGTGTCCAGTTGGGCAGGTTTCTCCCTGCCAAGGCTACCGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTCCTCTGTCGGTAGCCTaGGCAGGGAGAAACCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LYGEGHACTIKHMYCSTCPLSVA*AGRNLP Trigger: GGGCAGGTTTCTCCCTGCCAAGGCTACCGACAGAGG...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR TCA 72 bp | GGCCACTGGGGACAACTGAACAGCACAGCCAAACTTTaGAACAGAGAGACAGGGCCAGGCAAAGTGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GHWGQLNSTAKL*NRETGPGKVPT Trigger: GGTGGGCACTTTGCCTGGCCCTGTCTCTCTGTTTCAAAGTTTGGCTGTGCTGTTCAGTTGTCCCCAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR CCA 72 bp | CTTGGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTaGGGACCAATCAAGGGGCTTCCATGTAGGACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGSSKGGSSLHP*GPIKGLPCRTE Trigger: CTCGGTCCTACATGGAAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | AAAGGCACAGGCCGCTGGGTACAACGGCATGGTGACTaGCTACTTGGCTCCAGCAAAGGTGGCAGTAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGTGRWVQRHGD*LLGSSKGGSSL Trigger: CAAACTACTGCCACCTTTGCTGGAGCCAAGTAGCCAGTCACCATGCCGTTGTACCCAGCGGCCTGTGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | GCAAGCCCACCCCATCTCCAAGTGCTTCTGCTGAGATaGATGCAGACAGATCCAGTCCAGTCATTGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASPPHLQVLLLR*MQTDPVQSLAG Trigger: CCCTGCCAATGACTGGACTGGATCTGTCTGCATCCATCTCAGCAGAAGCACTTGGAGATGGGGTGGGCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | GGCAGGACTGTCACAGTGACCTCACTGCTTAGTTCCTaGAAAGCTTGGGACAGACAGGGGCCTTGGCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRTVTVTSLLSS*KAWDRQGPWLD Trigger: GTCTAGCCAAGGCCCCTGTCTGTCCCAAGCTTTCCAGGAACTAAGCAGTGAGGTCACTGTGACAGTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR TCA 72 bp | GGTCCCGGCTTGGCCCAAAATGGAGACAGTACATTCTaGCCAGCTTCTGCCTGGTCCAGGCTCAATGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GPGLAQNGDSTF*PASAWSRLNVQ Trigger: CTGAACATTGAGCCTGGACCAGGCAGAAGCTGGTCAGAATGTACTGTCTCCATTTTGGGCCAAGCCGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR TCA 72 bp | GTCCCAGAGCGGGAAAGCTCAGAATATTCTCCTCGCTaGCCAGGCAGGACTGTCACAGTGACCTCACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPERESSEYSPR*PGRTVTVTSLL Trigger: AAGCAGTGAGGTCACTGTGACAGTCCTGCCTGGTCAGCGAGGAGAATATTCTGAGCTTTCCCGCTCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR CCA 72 bp | ATCCTCAGCACACCACAAAAGCCTGTTGCCTTCAGCTaGTTACAGGTCACCACACAGGTCAGACCCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ILSTPQKPVAFS*LQVTTQVRPSL Trigger: GAGGGAGGGTCTGACCTGTGTGGTGACCTGTAACCAGCTGAAGGCAACAGGCTTTTGTGGTGTGCTGAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTGGGGTCACAGACCTCATAGCCTGCACCTAGCAAGGTaGCTGAAGCTGACAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QTTVEKGAVQAWGHRPHSLHLAR*LKLTVM Trigger: CATGACTGTCAGCTTCAGCAACCTTGCTAGGTGCAG...GCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR GCA 72 bp | ACTGGCTACTTGGCTCCAGCAAAGGTGGCAGTAGTTTaGACCCTTGGGGACCAATCAAGGGGCTTCCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TGYLAPAKVAVV*TLGDQSRGFHV Trigger: TACATGGAAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCCAAGTAGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR GCA 72 bp | GGGGAGGGGCACGCATGTACCATCAAGCACATGTATTaGAGCACATGTACCAAGCACATACCAGAAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GEGHACTIKHMY*STCTKHIPEAC Trigger: GCAGGCTTCTGGTATGTGCTTGGTACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | CATCAGACAACTGTAGAGAAAGGGGCAGTGCAAGCCTaGGGTCACAGACCTCATAGCACCTTGGCCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HQTTVEKGAVQA*GHRPHSTLAKA Trigger: AGCTTTGGCCAAGGTGCTATGAGGTCTGTGACCCCAGGCTTGCACTGCCCCTTTCTCTACAGTTGTCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR TCA 72 bp | GAAGGAGGTCACCGGGAGGTGATCTTTTTCCACCTCTaGTTGAGCAAGACAAGGCCACTGGGGACAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EGGHREVIFFHL*LSKTRPLGTTE Trigger: TTCAGTTGTCCCCAGTGGCCTTGTCTTGCTCAATCAGAGGTGGAAAAAGATCACCTCCCGGTGACCTCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR GCA 72 bp | AGCCACAGTGGCCACTGTACTGATTCCCCCAAATCCTaGAGAGCCACGAAGGCTGATGTCTTGTTACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSGHCTDSPKS*RATKADVLLLH Trigger: ATGGAGTAACAAGACATCAGCCTTCGTGGCTCTGCAGGATTTGGGGGAATCAGTACAGTGGCCACTGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCACTAGCCAAGGCACAGTaGATCTTAGCCAGGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IRKDIPYSGQTLPTSGCALAKAQ*ILARRL Trigger: GAGCCTCCTGGCTAAGATCAACTGTGCCTTGGCTAG...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGGCCACAGGGTACCCATTTTGTGGCACCTTaGAGGGGTTCTTGGAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QAQCSGQTLGSVLRPQGTHFVAP*RGSWRS Trigger: ACTTCTCCAAGAACCCCTCAAAGGTGCCACAAAATG...GGTACCCTGTGGCCTGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGATGCAGACAGATCCAGTCCAGTCATTGGCAGGGTCTTCTGAAAACAGAGCTATGGTGACTGGCTACTaGGCTCCAGCAAAGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WMQTDPVQSLAGSSENRAMVTGY*APAKVA Trigger: TGCCACCTTTGCTGGAGCCAAGTAGCCAGTCACCAT...AGCTCTGTTTTCAGAAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGACTATAAAACCAATTCACCAGGCAGAGATCACCGGCCAATTAAAGCAGAACCTCTTGCCTCCTaGAGCTGGGCTGCCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRDYKTNSPGRDHRPIKAEPLAS*SWAASC Trigger: GCAGCTGGCAGCCCAGCTCAAGGAGGCAAGAGGTTC...TGCTTTAATTGGCCGGTGATCTCTGCCTGGTGAATTGGTTTTATAGTCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCAAAAGGTGGCAGTAGTTaGCACCCTTGGGGACCAATC | + |
|
Preference number: 3 (lower is better) Translates to: IRKDIPYSGQTLPTSGCAKGGSS*HPWGPI Trigger: GATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTT...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR TCA 72 bp | AATATTCTCCTCGCTGACCAGGCAGGACTGTCACAGTaGCCTCACTGCTTAGTTCCTGGAAAGCTTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: NILLADQAGLSQ*PHCLVPGKLGT Trigger: TGTCCCAAGCTTTCCAGGAACTAAGCAGTGAGGTCACTGTGACAGTCCTGCCTGGTCAGCGAGGAGAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR GCA 72 bp | GGCCCAAAATGGAGACAGTACATTCTGACCAGCTTCTaGCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPKWRQYILTSF*LVQAQCSGQTL Trigger: CAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGCTGGTCAGAATGTACTGTCTCCATTTTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | CCTGGCTTGCCTGAGTTAGTAAGTTTGGTCCCGGCTTaGCCCAAAATGGAGACAGTACATTCTGACCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PGLPELVSLVPA*PKMETVHSDQL Trigger: AAGCTGGTCAGAATGTACTGTCTCCATTTTGGGCCAAGCCGGGACCAAACTTACTAACTCAGGCAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | TTAACCAGCTCCGGTAGCAAGTCTCAGTCCACTTCCTaGAGAACATCACCAACTGGTCATCTTCAGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTSSGSKSQSTS*RTSPTGHLQSL Trigger: AAGGCTCTGAAGATGACCAGTTGGTGATGTTCTCCAGGAAGTGGACTGAGACTTGCTACCGGAGCTGGTTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCACATTTTGTGGCACCTTaGAGGGGTTCTTGGAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IRKDIPYSGQTLPTSGCAHFVAP*RGSWRS Trigger: ACTTCTCCAAGAACCCCTCAAAGGTGCCACAAAATG...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR TCA 72 bp | CCTGGGGATTGTGAATTAGTAGAGCAGTTTGGCCCCTaGATACAGGGCTTCTGTTCCTCTAGGGCATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PGDCELVEQFGP*IQGFCSSRAFL Trigger: TAGAAATGCCCTAGAGGAACAGAAGCCCTGTATTCAGGGGCCAAACTGCTCTACTAATTCACAATCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGACTATAAAACCAATTCACCAGGCAGAGATCACCGGCCAATTAAAGCACTCCTTCAACAGTGTTaGACAAAGGCCCCCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRDYKTNSPGRDHRPIKALLQQC*TKAPIL Trigger: GAGGATGGGGGCCTTTGTCAAACACTGTTGAAGGAG...TGCTTTAATTGGCCGGTGATCTCTGCCTGGTGAATTGGTTTTATAGTCTCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR-3UTR CAA 90 bp | ACCACTGAGAGTGCACACAGTACCTTTGTGCAAATTAGGAAAGACATTCCTTACATGGTGACTGGCTACTaGGCTCCAGCAAAGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTESAHSTFVQIRKDIPYMVTGY*APAKVA Trigger: TGCCACCTTTGCTGGAGCCAAGTAGCCAGTCACCAT...GTAAGGAATGTCTTTCCTAATTTGCACAAAGGTACTGTGTGCACTCTCAGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCACTGAGAGTGCACACAGTACCTTTGTGCAAATTAGGAAAGACATTCCTTACCTCCTTCAACAGTGTTaGACAAAGGCCCCCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TTESAHSTFVQIRKDIPYLLQQC*TKAPIL Trigger: GAGGATGGGGGCCTTTGTCAAACACTGTTGAAGGAG...GTAAGGAATGTCTTTCCTAATTTGCACAAAGGTACTGTGTGCACTCTCAGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | TATTTATATTTTACAGTCCTGGGATCCATCCGAGGGTCTCTTGACCGACAGGCAAGGACCGAGTCAGACTaGAAGCCTCTCAAGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YLYFTVLGSIRGSLDRQARTESD*KPLKFD Trigger: ATCAAACTTGAGAGGCTTCAAGTCTGACTCGGTCCT...TGCCTGTCGGTCAAGAGACCCTCGGATGGATCCCAGGACTGTAAAATATAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR TCA 72 bp | ATATTTTACAGTCCTGGGATCCATCCGAGGGTCTCTTaGCCGACAGGCAAGCCCTTTATCATTGAGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IFYSPGIHPRVS*PTGKPFIIELQ Trigger: TTGAAGCTCAATGATAAAGGGCTTGCCTGTCGGTCAAGAGACCCTCGGATGGATCCCAGGACTGTAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACCTCATAGCACCTTGGCCAAAGCTGGCATATATGGAAGAGCTCAGCTTTGTGCACACAGTACCTTaGTGCAAATTAGGAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: TDLIAPWPKLAYMEELSFVHTVP*CKLGKT Trigger: TGTCTTTCCTAATTTGCACAAAGGTACTGTGTGCAC...AAAGCTGAGCTCTTCCATATATGCCAGCTTTGGCCAAGGTGCTATGAGGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| 3UTR TCA 72 bp | GGGGAGTCACTGGGCTTGTTCAATTTGAGTCTACTCTaGGTTTCTCCTCCAAAGTCCTTGAATAATCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GESLGLFNLSLL*VSPPKSLNNPV Trigger: CACAGGATTATTCAAGGACTTTGGAGGAGAAACTCAGAGTAGACTCAAATTGAACAAGCCCAGTGACTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCACTGAGAGTGCACACAGTACCTTTGTGCAAATTAGGAAAGACATTCCTTACAGGACCGAGTCAGACTaGAAGCCTCTCAAGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TTESAHSTFVQIRKDIPYRTESD*KPLKFD Trigger: ATCAAACTTGAGAGGCTTCAAGTCTGACTCGGTCCT...GTAAGGAATGTCTTTCCTAATTTGCACAAAGGTACTGTGTGCACTCTCAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR-3UTR CAA 90 bp | TATTTATATTTTACAGTCCTGGGATCCATCCGAGGGTCTCTTGACCGACAGGCATCTCCTCCAAAGTCCTaGAATAATCCTGTGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YLYFTVLGSIRGSLDRQASPPKS*NNPVFF Trigger: GAAGAACACAGGATTATTCAAGGACTTTGGAGGAGA...TGCCTGTCGGTCAAGAGACCCTCGGATGGATCCCAGGACTGTAAAATATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR GCA 72 bp | CCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTTaGAAACAGAAACCCACTTTCTTAGCAGACGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: PVFIFITWVPSP*KQKPTFLADEL Trigger: TAGTTCGTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR TCA 72 bp | AAACATTGTCTGTTACTTCCAAAGTCACTTTTCAGCTaGCAAAGCCTCAGTCCTAGCTTCTTCCTGTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: KHCLLLPKSLFS*QSLSPSFFLYP Trigger: GGGATACAGGAAGAAGCTAGGACTGAGGCTTTGTCAGCTGAAAAGTGACTTTGGAAGTAACAGACAATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR GCA 72 bp | CTGAAAGCTAAAGGGAGATTCAAGATGTGTCAGCTCTaGAGTTTCCATGGTCTAAACATTGTCTGTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LKAKGRFKMCQL*SFHGLNIVCYF Trigger: GAAGTAACAGACAATGTTTAGACCATGGAAACTGCAGAGCTGACACATCTTGAATCTCCCTTTAGCTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CCA 72 bp | CTTCTTTGTCTAGGGAAGCCATCTTTCTTTGAGCCTTaGCTCATCTTCATTATAGCACCAATGTCTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLCLGKPSFFEP*LIFIIAPMSFL Trigger: AAGGAAAGACATTGGTGCTATAATGAAGATGAGCCAAGGCTCAAAGAAAGATGGCTTCCCTAGACAAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR GCA 90 bp | GTGGGATGGCTGCTGGGTTCCCACGCCCCCAGCAAGCCCACCCCATCTCCAAGTCAAACTCCAGCGGGCTaGGGTGGGAGGCGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VGWLLGSHAPSKPTPSPSQTPAG*GGRRWR Trigger: GCGCCACCGCCTCCCACCGCAGCCCGCTGGAGTTTG...ACTTGGAGATGGGGTGGGCTTGCTGGGGGCGTGGGAACCCAGCAGCCATCCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTCCCCACAAGGCAGCATaGCACCCTGGCTTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QCWACVSPLGQQGRPAGPPHKAA*HPGLGK Trigger: CTTCCCCAAGCCAGGGTGTCATGCTGCCTTGTGGGG...AGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGCTTTTCGTTCCCTCCCTGAGCACTGCAGCGGGGAGAGAAGGAAGGAGTGCGGCAGCGACTGCTaGAGGCGCGAGCTGGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAAFRSLPEHCSGERRKECGSDC*RRELAR Trigger: CCGCGCCAGCTCGCGCCTGCAGCAGTCGCTGCCGCA...CTCCTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGAACGAAAAGCAGCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTCTCAGTCCAGCTGGCTCTaGGCAAACAGGTCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGLRFATGAARQASGASQSSWL*ANRSAE Trigger: CTCTGCTGACCTGTTTGCCCAGAGCCAGCTGGACTG...AGAGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGATGGCTGCTGGGTTCCCACGCCCCCAGCAAGCCCACCCCATCTCCAAGTCAGTCCAGCTGGCTCTaGGCAAACAGGTCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGWLLGSHAPSKPTPSPSQSSWL*ANRSAE Trigger: CTCTGCTGACCTGTTTGCCCAGAGCCAGCTGGACTG...ACTTGGAGATGGGGTGGGCTTGCTGGGGGCGTGGGAACCCAGCAGCCATCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | TTATCAGTGGGATGGCTGCTGGGTTCCCACGCCCCCAGCAAGCCCACCCCATCTAGGGGACAGTCCAGCTaGCTCTGGGCAAACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVGWLLGSHAPSKPTPSRGQSS*LWANRS Trigger: TGACCTGTTTGCCCAGAGCCAGCTGGACTGTCCCCT...AGATGGGGTGGGCTTGCTGGGGGCGTGGGAACCCAGCAGCCATCCCACTGATAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGGGGAGTCAGTGACGGGACTGGGGGATGTTCCTCTCCAGATCTGTTCGTGAGAGGGAAGAGCTaGAGTCGACTGAGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGGVSDGTGGCSSPDLFVRGKS*SRLRGQ Trigger: CTGTCCCCTCAGTCGACTCCAGCTCTTCCCTCTCAC...GAACAGATCTGGAGAGGAACATCCCCCAGTCCCGTCACTGACTCCCCCAGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR TCA 90 bp | TTATCAGTGGGATGGCTGCTGGGTTCCCACGCCCCCAGCAAGCCCACCCCATCTTGGCTCCCCATCCTCTaGCTGGAACACATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVGWLLGSHAPSKPTPSWLPIL*LEHIIF Trigger: GAAGATGATGTGTTCCAGTCAGAGGATGGGGAGCCA...AGATGGGGTGGGCTTGCTGGGGGCGTGGGAACCCAGCAGCCATCCCACTGATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCATCAGCCTCCGAGTTGTaGTGCCAGGGCTCTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASAWSRLNVQVKLWAQFSSASEL*CQGSAP Trigger: TGGCGCAGAGCCCTGGCATCACAACTCGGAGGCTGA...TGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR TCA 90 bp | ACGCCCCCAGCAAGCCCACCCCATCTCCAAGTGCTTCTGCTGAGATGGATGCAGTGGCTCCCCATCCTCTaGCTGGAACACATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPASPPHLQVLLLRWMQWLPIL*LEHIIF Trigger: GAAGATGATGTGTTCCAGTCAGAGGATGGGGAGCCA...CTGCATCCATCTCAGCAGAAGCACTTGGAGATGGGGTGGGCTTGCTGGGGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTGGGGACCAATCAAGGGGCTTAGGGGACAGTCCAGCTaGCTCTGGGCAAACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSKGGSSLHPWGPIKGLRGQSS*LWANRS Trigger: TGACCTGTTTGCCCAGAGCCAGCTGGACTGTCCCCT...AAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAGCTTTGTTCTGCTGTCTTCCTTGAGGCTCTGTCCCCTAGGTCTGCAGTCCATCTCTCCTGGGTaGCTCCAGGACAGCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSFVLLSSLRLCPLGLQSISPG*LQDSVS Trigger: TGAGACGCTGTCCTGGAGTCACCCAGGAGAGATGGA...CTGCAGACCTAGGGGACAGAGCCTCAAGGAAGACAGCAGAACAAAGCTGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGCTGGACTGAGGGTCTaGGTGGCCTTGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASAWSRLNVQVKLWAQFSAGLRV*VALSSW Trigger: CCAGGAAGACAAGGCCACTCAGACCCTCAGTCCAGC...TGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTCCCCACAAGGCAGCATaGCACCCTGGCTTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYGEGHACTIKHMYCSTCPHKAA*HPGLGK Trigger: CTTCCCCAAGCCAGGGTGTCATGCTGCCTTGTGGGG...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCACTGCTCCCCAAGGGGTaGGCCTGCAGGGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRKDIPYSGQTLPTSGCALLPKG*ACRETG Trigger: GCCAGTTTCCCTGCAGGCTCACCCCTTGGGGAGCAG...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGCTTTGTTCTGCTGTCTTCCTTGAGGCTCTGTCCCCTAGGTCTGCAGCATGACACCCTGGCTTaGGGAAGCTGGACTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELSFVLLSSLRLCPLGLQHDTLA*GSWTEG Trigger: ACCCTCAGTCCAGCTTCCCCAAGCCAGGGTGTCATG...CTGCAGACCTAGGGGACAGAGCCTCAAGGAAGACAGCAGAACAAAGCTGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGCCTGGTCCAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGGCAGCATGACACCCTaGCTTGGGGAAGCTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASAWSRLNVQVKLWAQFSGSMTP*LGEAGL Trigger: CAGTCCAGCTTCCCCAAGCCAGGGTGTCATGCTGCC...TGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTGGACCAGGCAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGCTTTTCGTTCCCTCCCTGAGCACTGCAGCGGGGAGAGAAGGAAGGAGTTCAGGGCGAGGTTTTaGAGGAAAAGGAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAAFRSLPEHCSGERRKEFRARF*RKRKTC Trigger: GCAGGTCTTCCTTTTCCTTCAAAACCTCGCCCTGAA...CTCCTTCCTTCTCTCCCCGCTGCAGTGCTCAGGGAGGGAACGAAAAGCAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACGTGAGAGGGAAGAGCTaGAGTCGACTGAGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVWGGARMYHQAHVLQHVRGKS*SRLRGQ Trigger: CTGTCCCCTCAGTCGACTCCAGCTCTTCCCTCTCAC...GTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CAA 72 bp | GACTGGCTACTTGGCTCCAGCAAAGGTGGCAGTAGTTaGCACCCTTGGGGACCAATCAAGGGGCTTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DWLLGSSKGGSS*HPWGPIKGLPC Trigger: ACATGGAAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCCAAGTAGCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | TGGATGCAGACAGATCCAGTCCAGTCATTGGCAGGGTCTTCTGAAAACAGAGCTGCTGGACTGAGGGTCTaGGTGGCCTTGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WMQTDPVQSLAGSSENRAAGLRV*VALSSW Trigger: CCAGGAAGACAAGGCCACTCAGACCCTCAGTCCAGC...AGCTCTGTTTTCAGAAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | ACTGGTACCCGCCCCCTCCCCAGTAAGTCCCAGAGCGGGAAAGCTCAGAATATTTGGTCTGCAATACACTaGAGCTTTCTGGCGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTRPLPSKSQSGKAQNIWSAIH*SFLAIC Trigger: GCAGATCGCCAGAAAGCTTCAGTGTATTGCAGACCA...AATATTCTGAGCTTTCCCGCTCTGGGACTTACTGGGGAGGGGGCGGGTACCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAAAGACATTCCTTACTCTGGGCAGACCCTGCCCACATCAGGATGTGCAGACCACAGCAATGGGTaGGAGGGAAGAGCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRKDIPYSGQTLPTSGCADHSNG*EGRAGV Trigger: GACTCCAGCTCTTCCCTCTCACCCATTGCTGTGGTC...TGCACATCCTGATGTGGGCAGGGTCTGCCCAGAGTAAGGAATGTCTTTCCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | AACCCAGACGTGAATCGGGCTAGCCAAGGCACAGTTGATCTTAGCCAGGAGGCTTTCAGGGCGAGGTTTTaGAGGAAAAGGAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPDVNRASQGTVDLSQEAFRARF*RKRKTC Trigger: GCAGGTCTTCCTTTTCCTTCAAAACCTCGCCCTGAA...AGCCTCCTGGCTAAGATCAACTGTGCCTTGGCTAGCCCGATTCACGTCTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | TGGATGCAGACAGATCCAGTCCAGTCATTGGCAGGGTCTTCTGAAAACAGAGCTCATGACACCCTGGCTTaGGGAAGCTGGACTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WMQTDPVQSLAGSSENRAHDTLA*GSWTEG Trigger: ACCCTCAGTCCAGCTTCCCCAAGCCAGGGTGTCATG...AGCTCTGTTTTCAGAAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CAA 72 bp | TGGGGAGGGGCACGCATGTACCATCAAGCACATGTATaGCAGCACATGTACCAAGCACATACCAGAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGGARMYHQAHV*QHMYQAHTRSL Trigger: CAGGCTTCTGGTATGTGCTTGGTACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAGTGCACACAGTACCTTTGTGCAAATTAGGAAAGACATTCCTTACCTGCTCCCCAAGGGGTaGGCCTGCAGGGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTESAHSTFVQIRKDIPYLLPKG*ACRETG Trigger: GCCAGTTTCCCTGCAGGCTCACCCCTTGGGGAGCAG...GTAAGGAATGTCTTTCCTAATTTGCACAAAGGTACTGTGTGCACTCTCAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTGGGGACCAATCAAGGGGCTTCCGATGGAACTGGTCTaGAATACACTGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSKGGSSLHPWGPIKGLPMELV*NTLKLS Trigger: AGAAAGCTTCAGTGTATTGCAGACCAGTTCCATCGG...AAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTCATAGCACCTTGGCCAAAGCTGGCATATATGGAAGAGCTCAGCTTTTGGCTCCATCTCTCCTaGGTGACTCCAGGACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TDLIAPWPKLAYMEELSFWLHLS*VTPGQR Trigger: ACGCTGTCCTGGAGTCACCCAGGAGAGATGGAGCCA...AAAGCTGAGCTCTTCCATATATGCCAGCTTTGGCCAAGGTGCTATGAGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR CCA 90 bp | TATTTATATTTTACAGTCCTGGGATCCATCCGAGGGTCTCTTGACCGACAGGCAGGCAGCATGACACCCTaGCTTGGGGAAGCTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLYFTVLGSIRGSLDRQAGSMTP*LGEAGL Trigger: CAGTCCAGCTTCCCCAAGCCAGGGTGTCATGCTGCC...TGCCTGTCGGTCAAGAGACCCTCGGATGGATCCCAGGACTGTAAAATATAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAACAGTGTTTGACAAAGGCCCCCATCCTCAGTGGAGGTTCTGAACGGGGATCCCCATCCTCTGACTaGAACACATCATCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQQCLTKAPILSGGSERGSPSSD*NTSSSS Trigger: GCTAGAAGATGATGTGTTCCAGTCAGAGGATGGGGA...TCCCCGTTCAGAACCTCCACTGAGGATGGGGGCCTTTGTCAAACACTGTTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACTCCCCATCCTCTGACTaGAACACATCATCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVWGGARMYHQAHVLQHSPSSD*NTSSSS Trigger: GCTAGAAGATGATGTGTTCCAGTCAGAGGATGGGGA...GTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CAA 72 bp | CTGCTGAGATGGATGCAGACAGATCCAGTCCAGTCATaGGCAGGGTCTTCTGAAAACAGAGCTGACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRWMQTDPVQS*AGSSENRADKG Trigger: GCCTTTGTCAGCTCTGTTTTCAGAAGACCCTGCCAATGACTGGACTGGATCTGTCTGCATCCATCTCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR GCA 90 bp | CTGTATGGGGAGGGGCACGCATGTACCATCAAGCACATGTATTGCAGCACATGTCCGATGGAACTGGTCTaGAATACACTGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYGEGHACTIKHMYCSTCPMELV*NTLKLS Trigger: AGAAAGCTTCAGTGTATTGCAGACCAGTTCCATCGG...ACATGTGCTGCAATACATGTGCTTGATGGTACATGCGTGCCCCTCCCCATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTTGCAAACAGAAACCCACTGGTCTGCAATACACTaGAGCTTTCTGGCGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLHIHYLGPLSLQTETHWSAIH*SFLAIC Trigger: GCAGATCGCCAGAAAGCTTCAGTGTATTGCAGACCA...GTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CAA 72 bp | AAGCCCACCCTCAGAACCAGTCTTCATATTCATTACTaGGGTCCCCTCTCCTTGCAAACAGAAACCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPTLRTSLHIHY*GPLSLQTETHF Trigger: AAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGTTCTGAGGGTGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CAA 72 bp | TTTAAGTTTCACCCTGGCTTGCCTGAGTTAGTAAGTTaGGTCCCGGCTTGGCCCAAAATGGAGACAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FKFHPGLPELVS*VPAWPKMETVH Trigger: ATGTACTGTCTCCATTTTGGGCCAAGCCGGGACCAAACTTACTAACTCAGGCAAGCCAGGGTGAAACTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| 3UTR CAA 72 bp | ACCAGTCTTCATATTCATTACTTGGGTCCCCTCTCCTaGCAAACAGAAACCCACTTTCTTAGCAGACGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TSLHIHYLGPLS*QTETHFLSRRT Trigger: AGTTCGTCTGCTAAGAAAGTGGGTTTCTGTTTGCAAGGAGAGGGGACCCAAGTAATGAATATGAAGACTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS CCA 90 bp | GAGGCGGTGGCGCGGGCTGCGGCAGCGACTGCTGCAGGCGCGAGCTaGCGCGGGAGGAGGCCACGGCACACCGCGCGGTATTGTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EAVARAAAATAAGAS*RGRRPRHTARYCFQ Trigger: TTGGAAACAATACCGCGCGGTGTGCCGTGGCCTCCTCCCGCGCCAGCTCGCGCCTGCAGCAGTCGCTGCCGCAGCCCGCGCCACCGCCTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS CCA 90 bp | CCACACTCGATTGGGAAGAAGGGGGCAAACTCCAGCGGGCTGCGGTaGGAGGCGGTGGCGCGGGCTGCGGCAGCGACTGCTGCAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PHSIGKKGANSSGLR*EAVARAAAATAAGA Trigger: CGCGCCTGCAGCAGTCGCTGCCGCAGCCCGCGCCACCGCCTCCCACCGCAGCCCGCTGGAGTTTGCCCCCTTCTTCCCAATCGAGTGTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS GCA 90 bp | GGTGCCCACACTCGATTGGGAAGAAGGGGGCAAACTCCAGCGGGCTaGGGTGGGAGGCGGTGGCGCGGGCTGCGGCAGCGACTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GAHTRLGRRGQTPAG*GGRRWRGLRQRLLQ Trigger: CTGCAGCAGTCGCTGCCGCAGCCCGCGCCACCGCCTCCCACCGCAGCCCGCTGGAGTTTGCCCCCTTCTTCCCAATCGAGTGTGGGCACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS-3UTR CAA 90 bp | CAGTGTTGGGCTTGCGTTTCGCCACTGGGGCAGCAAGGCAGGCCAGCGGGGCCTGGTGCCCACACTCGATaGGGAAGAAGGGGGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QCWACVSPLGQQGRPAGPGAHTR*GRRGQT Trigger: AGTTTGCCCCCTTCTTCCCAATCGAGTGTGGGCACC...AGGCCCCGCTGGCCTGCCTTGCTGCCCCAGTGGCGAAACGCAAGCCCAACACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS CCA 90 bp | ATGGGCCGGAGTCCGGGACCACAGCAATGGGTGAGAGGGAAGAGCTaGAGTCGACTGAGGGGACAGTCCAGCTGGCTCTGGGCAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGRSPGPQQWVRGKS*SRLRGQSSWLWANR Trigger: CCTGTTTGCCCAGAGCCAGCTGGACTGTCCCCTCAGTCGACTCCAGCTCTTCCCTCTCACCCATTGCTGTGGTCCCGGACTCCGGCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS CCA 90 bp | AGAGGGAAGAGCTGGAGTCGACTGAGGGGACAGTCCAGCTGGCTCTaGGCAAACAGGTCAGCAGAGAGCAAGCCCCCAGGCTGTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGKSWSRLRGQSSWL*ANRSAESKPPGCVP Trigger: AGGGACACAGCCTGGGGGCTTGCTCTCTGCTGACCTGTTTGCCCAGAGCCAGCTGGACTGTCCCCTCAGTCGACTCCAGCTCTTCCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS CCA 90 bp | CTCTGTCACCCCACAAGGCAGCATGACACCCTGGCTTGGGGAAGCTaGACTGAGGGTCTGAGTGGCCTTGTCTTCCTGGCTTATGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCHPTRQHDTLAWGS*TEGLSGLVFLAYGP Trigger: CGGCCCATAAGCCAGGAAGACAAGGCCACTCAGACCCTCAGTCCAGCTTCCCCAAGCCAGGGTGTCATGCTGCCTTGTGGGGTGACAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS CCA 90 bp | CTGGGGTTCCTCTGTCACCCCACAAGGCAGCATGACACCCTGGCTTaGGGAAGCTGGACTGAGGGTCTGAGTGGCCTTGTCTTCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGFLCHPTRQHDTLA*GSWTEGLSGLVFLA Trigger: AGCCAGGAAGACAAGGCCACTCAGACCCTCAGTCCAGCTTCCCCAAGCCAGGGTGTCATGCTGCCTTGTGGGGTGACAGAGGAACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCCAGCAAAGGTGGCAGTAGTTTGCACCCTTGGGGACCAATCAAGGGGCTTGCACACCGCGCGGTATaGTTTCCAAAATACGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSKGGSSLHPWGPIKGLAHRAV*FPKYAR Trigger: GCGGGCGTATTTTGGAAACAATACCGCGCGGTGTGC...AAGCCCCTTGATTGGTCCCCAAGGGTGCAAACTACTGCCACCTTTGCTGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS GCA 90 bp | TCGGTTCTGCTGGTGTTGTTGCGTATGAAGCCGATGGAACTGGTCTaGAATACACTGAAGCTTTCTGGCGATCTGCACCTCTGCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLVLLRMKPMELV*NTLKLSGDLHLCSV Trigger: CACCGAGCAGAGGTGCAGATCGCCAGAAAGCTTCAGTGTATTGCAGACCAGTTCCATCGGCTTCATACGCAACAACACCAGCAGAACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS CCA 90 bp | GCGTATGAAGCCGATGGAACTGGTCTGCAATACACTGAAGCTTTCTaGCGATCTGCACCTCTGCTCGGTGCTGAAGGAACTGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AYEADGTGLQYTEAF*RSAPLLGAEGTVLQ Trigger: CTGAAGGACAGTTCCTTCAGCACCGAGCAGAGGTGCAGATCGCCAGAAAGCTTCAGTGTATTGCAGACCAGTTCCATCGGCTTCATACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS-3UTR CAA 90 bp | AACCCAGACGTGAATCGGGCTAGCCAAGGCACAGTTGATCTTAGCCAGGAGGCTGTTCAGGGCGAGGTTTaGAAGGAAAAGGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPDVNRASQGTVDLSQEAVQGEV*KEKEDL Trigger: CAGGTCTTCCTTTTCCTTCAAAACCTCGCCCTGAAC...AGCCTCCTGGCTAAGATCAACTGTGCCTTGGCTAGCCCGATTCACGTCTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCAATGTTCAGGTCAAACTCTGGGCTCAGTTCTCAGGCCACAGGGTACCGTTCAGGGCGAGGTTTaGAAGGAAAAGGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QAQCSGQTLGSVLRPQGTVQGEV*KEKEDL Trigger: CAGGTCTTCCTTTTCCTTCAAAACCTCGCCCTGAAC...GGTACCCTGTGGCCTGAGAACTGAGCCCAGAGTTTGACCTGAACATTGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 |
||
| CDS CCA 72 bp | GCGCGGGCTGCGGCAGCGACTGCTGCAGGCGCGAGCTaGCGCGGGAGGAGGCCACGGCACACCGCGCGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ARAAAATAAGAS*RGRRPRHTARY Trigger: ATACCGCGCGGTGTGCCGTGGCCTCCTCCCGCGCCAGCTCGCGCCTGCAGCAGTCGCTGCCGCAGCCCGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS CCA 72 bp | AGGGGGCAAACTCCAGCGGGCTGCGGTGGGAGGCGGTaGCGCGGGCTGCGGCAGCGACTGCTGCAGGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGQTPAGCGGRR*RGLRQRLLQAR Trigger: TCGCGCCTGCAGCAGTCGCTGCCGCAGCCCGCGCCACCGCCTCCCACCGCAGCCCGCTGGAGTTTGCCCCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS GCA 72 bp | ACTCGATTGGGAAGAAGGGGGCAAACTCCAGCGGGCTaGGGTGGGAGGCGGTGGCGCGGGCTGCGGCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TRLGRRGQTPAG*GGRRWRGLRQR Trigger: TCGCTGCCGCAGCCCGCGCCACCGCCTCCCACCGCAGCCCGCTGGAGTTTGCCCCCTTCTTCCCAATCGAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS CCA 72 bp | ATTGGGAAGAAGGGGGCAAACTCCAGCGGGCTGCGGTaGGAGGCGGTGGCGCGGGCTGCGGCAGCGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IGKKGANSSGLR*EAVARAAAATA Trigger: AGCAGTCGCTGCCGCAGCCCGCGCCACCGCCTCCCACCGCAGCCCGCTGGAGTTTGCCCCCTTCTTCCCAAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090219.13 |
||
| CDS CCA 72 bp | AGCTGGAGTCGACTGAGGGGACAGTCCAGCTGGCTCTaGGCAAACAGGTCAGCAGAGAGCAAGCCCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SWSRLRGQSSWL*ANRSAESKPPG Trigger: GCCTGGGGGCTTGCTCTCTGCTGACCTGTTTGCCCAGAGCCAGCTGGACTGTCCCCTCAGTCGACTCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS CCA 72 bp | GCCGATGGAACTGGTCTGCAATACACTGAAGCTTTCTaGCGATCTGCACCTCTGCTCGGTGCTGAAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: ADGTGLQYTEAF*RSAPLLGAEGT Trigger: AGTTCCTTCAGCACCGAGCAGAGGTGCAGATCGCCAGAAAGCTTCAGTGTATTGCAGACCAGTTCCATCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS CAA 72 bp | CCCTTCCCTGTTTTCTTGTCTGTTCAGGGCGAGGTTTaGAAGGAAAAGGAAGACCTGCCACCACGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PFPVFLSVQGEV*KEKEDLPPRTV Trigger: GACCGTGCGTGGTGGCAGGTCTTCCTTTTCCTTCAAAACCTCGCCCTGAACAGACAAGAAAACAGGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||
| CDS GCA 72 bp | CTGGTGTTGTTGCGTATGAAGCCGATGGAACTGGTCTaGAATACACTGAAGCTTTCTGGCGATCTGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVLLRMKPMELV*NTLKLSGDLHL Trigger: GAGGTGCAGATCGCCAGAAAGCTTCAGTGTATTGCAGACCAGTTCCATCGGCTTCATACGCAACAACACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090219.13 ENSMUST00000110859.3 ENSMUST00000125860.3 |
||