Pregenerated sensors for BMERB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044117Ensembl transcript IDs: ENSMUST00000056521.12, ENSMUST00000118412.8, ENSMUST00000131608.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTTGGCCACTGTTaGCTTGCTAGGTGGGGGCTCTGCCTTCTTCTCTGCCCGGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: PTAILDECQPCLGHC*LARWGLCLLLCPGA Trigger: AGCTCCCGGGCAGAGAAGAAGGCAGAGCCCCCACCTAGCAAGCCAACAGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR TCA 90 bp | ACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTaGGGGGCTCTCTATTGCTACACGCTGTACAGACTGGGCCCACCT | + |
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Preference number: 1 (lower is better) Translates to: TDSWVGHALGRVMRQ*GALYCYTLYRLGPP Trigger: AGGTGGGCCCAGTCTGTACAGCGTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| 3UTR TCA 90 bp | GCTACAGTCCCTGGGAGAGGGCAAACAGGGAACGGGACTTGTATCTaGCAGCAAAGCTGGGAGGGTAGGTGGGGAATGGGACCAACACTG | + |
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Preference number: 1 (lower is better) Translates to: ATVPGRGQTGNGTCI*QQSWEGRWGMGPTL Trigger: CAGTGTTGGTCCCATTCCCCACCTACCCTCCCAGCTTTGCTGTCAGATACAAGTCCCGTTCCCTGTTTGCCCTCTCCCAGGGACTGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | CCCATAGCTCTGGGGCACCCACATAGGGGCTACATGATGTTGCACTaGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: PIALGHPHRGYMMLH*VVPQQSLMSASPVL Trigger: CAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTGCAACATCATGTAGCCCCTATGTGGGTGCCCCAGAGCTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR GCA 90 bp | ATGATAAGACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATaGGACAGTGAGGGGCTCTCTATTGCTACACGCTGTACAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: MIRQTPGLGMLWGGS*DSEGLSIATRCTDW Trigger: CCAGTCTGTACAGCGTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCTTATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| 3UTR CCA 90 bp | ACTCTGTTCCACTGTGGGCTGGGCATGGCAAATCAAGGAAGAGCCTaGAGTCTGGCAGATAGATACACACCAGGCTGGGATGGAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: TLFHCGLGMANQGRA*SLADRYTPGWDGAG Trigger: TCCTGCTCCATCCCAGCCTGGTGTGTATCTATCTGCCAGACTCCAGGCTCTTCCTTGATTTGCCATGCCCAGCCCACAGTGGAACAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | TCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTTaGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: SLQFSATWSKHWICF*SQFPTLFHCGLGMA Trigger: TGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR GCA 90 bp | TATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTaGTTTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: YWSLQFSATWSKHWI*FWSQFPTLFHCGLG Trigger: GCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR TCA 90 bp | TGGGTTGGCATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCTTaGTATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: WVGIFSGSPSHSLWS*YWSLQFSATWSKHW Trigger: CCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | TTTGCAGCAGCCCTGGGTGAAGAGGATGTGGGTTGGCATCTTTTCTaGGTCCCCTTCTCATTCACTCTGGTCTTGATATTGGTCCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FAAALGEEDVGWHLF*VPFSFTLVLILVPA Trigger: TGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | AGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCTaGGTGAAGAGGATGTGGGTTGGCATCTTTTCTGGGTCCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSVTFPLVCTHLQQP*VKRMWVGIFSGSPS Trigger: AGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR GCA 90 bp | CCCTTCTCATTCACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTaGTACCTGGTCCAAGCACTGGATCTGCTTTTGGTCACAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: PFSFTLVLILVPAVL*YLVQALDLLLVTVP Trigger: GGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | CCACTTGTATGTACTCATTTGCAGCAGCCCTGGGTGAAGAGGATGTaGGTTGGCATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: PLVCTHLQQPWVKRM*VGIFSGSPSHSLWS Trigger: AGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGAGTACATACAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | CAGACAATGGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGTGTTaGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: QTMGHSWVRLPVSVC*ASSVTFPLVCTHLQ Trigger: CTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR GCA 90 bp | TTTCTGGGTCCCCTTCTCATTCACTCTGGTCTTGATATTGGTCCCTaGAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: FLGPLLIHSGLDIGP*SSLLPGPSTGSAFG Trigger: ACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CCA 90 bp | TGTATGTACTCATTTGCAGCAGCCCTGGGTGAAGAGGATGTGGGTTaGCATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCTTGATA | + |
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Preference number: 1 (lower is better) Translates to: CMYSFAAALGEEDVG*HLFWVPFSFTLVLI Trigger: TATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGAGTACATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR GCA 90 bp | AGGCCAGTCATAACACACATACACGCACAGAGTTCACACAGGCTGTaGTGGGCTGGCCATTTAAAATGTACATCAAGTTACACAAGACGA | + |
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Preference number: 1 (lower is better) Translates to: RPVITHIHAQSSHRL*WAGHLKCTSSYTRR Trigger: TCGTCTTGTGTAACTTGATGTACATTTTAAATGGCCAGCCCAGCACAGCCTGTGTGAACTCTGTGCGTGTATGTGTGTTATGACTGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 90 bp | TGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCTCTCTATaGCTACACGCTGTACAGACTGGGCCCACCTGCCATACCCATAGC | + |
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Preference number: 2 (lower is better) Translates to: WACSGEGHATVRGSL*LHAVQTGPTCHTHS Trigger: GCTATGGGTATGGCAGGTGGGCCCAGTCTGTACAGCGTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| 3UTR CAA 90 bp | CACTGGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTaGGCCACTGTTGGCTTGCTAGGTGGGGGCTCTGCCTTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HWVVPQQSLMSASPV*ATVGLLGGGSAFFS Trigger: AGAGAAGAAGGCAGAGCCCCCACCTAGCAAGCCAACAGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTTGGCCACTGTGAAATGGGGGCTATaGGGACAAGAGGGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HWVVPQQSLMSASPVLATVKWGL*GQEGGR Trigger: CCTCCCACCCTCTTGTCCTCATAGCCCCCATTTCAC...AGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTTGGCCACTGCTCTTGTACCCCTGTaGAATGGGGGCTATGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: HWVVPQQSLMSASPVLATALVPL*NGGYED Trigger: GTCCTCATAGCCCCCATTTCACAGGGGTACAAGAGC...AGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCAATCCCTTCTGCCTTaGAAAGCTCTTGTACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RQTPGLGMLWGGSCDSEGQSLLP*KALVPL Trigger: CAGGGGTACAAGAGCTTTCCAAGGCAGAAGGGATTG...CCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| 3UTR CAA 90 bp | GTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTaGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGC | + |
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Preference number: 2 (lower is better) Translates to: VPAVLCYLVQALDLL*VTVPYSVPLWAGHG Trigger: GCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR TCA 90 bp | ATAAGACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGCACATAGGGGCTACATaGTGTTGCACTGGGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: IRQTPGLGMLWGGSCDSEHIGAT*CCTGWS Trigger: GGACCACCCAGTGCAACATCATGTAGCCCCTATGTG...CTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCTTTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGCAGACAGACTCCTGGGTTaGGCATGCTCTGGGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: ICFWSQFPTLFHCGLGMADRLLG*ACSGEG Trigger: ACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTC...TGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR TCA 90 bp | ATCTGCTTTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGCAGTGAAATGGGGGCTATaGGGACAAGAGGGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ICFWSQFPTLFHCGLGMAVKWGL*GQEGGR Trigger: CCTCCCACCCTCTTGTCCTCATAGCCCCCATTTCAC...TGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCTTTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGCAAGCTGGGAGGGTAGGTaGGGAATGGGACCAACACTG | + |
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Preference number: 2 (lower is better) Translates to: ICFWSQFPTLFHCGLGMASWEGR*GMGPTL Trigger: CAGTGTTGGTCCCATTCCCCACCTACCCTCCCAGCT...TGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCTGGTTCAAACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTGGTGTGTGGGCTGTGTaGAACCCTCCAAGCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: VGLVQTRHQTMGHSWVRLGVWAV*NPPSYS Trigger: ACTGTAGCTTGGAGGGTTCCACACAGCCCACACACC...AAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGTTTGAACCAGCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 90 bp | AGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTGGAAAGCTCTaGTACCCCTGTGAAATGGGGGCTATGAGGACAAGAGGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSHGLAVNPFCLGKL*YPCEMGAMRTRGWE Trigger: CTCCCACCCTCTTGTCCTCATAGCCCCCATTTCACAGGGGTACAAGAGCTTTCCAAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCTGGTTCAAACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTCAGTTCTCTGCTACCTaGTCCAAGCACTGGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: VGLVQTRHQTMGHSWVRLQFSAT*SKHWIC Trigger: GCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTG...AAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGTTTGAACCAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 90 bp | GCTGGGAGGGTAGGTGGGGAATGGGACCAACACTGTGCTAGATTATaGAAATTCACAGCTATACACACCTGGGGCTATGCCCTTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGRVGGEWDQHCARL*KFTAIHTWGYALAQ Trigger: CTGGGCAAGGGCATAGCCCCAGGTGTGTATAGCTGTGAATTTCAATAATCTAGCACAGTGTTGGTCCCATTCCCCACCTACCCTCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCAACGGGACTTGTATCTaGCAGCAAAGCTGGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: CWASSVTFPLVCTHLQQPNGTCI*QQSWEG Trigger: ACCCTCCCAGCTTTGCTGTCAGATACAAGTCCCGTT...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR TCA 90 bp | ATACCCATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTTGCCCGGGAGCTGGCTaGAGTCTTGGTTACTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: IPIAPDSSHGLAVNPFCLCPGAG*SLGYFV Trigger: GACAAAGTAACCAAGACTTCAGCCAGCTCCCGGGCA...AAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTATGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGGGTTGGGCATGCTCTaGGGAGGGTCATGCGACAGT | + |
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Preference number: 2 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFGLGML*GGSCDS Trigger: ACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCC...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCAGGGTAGGTGGGGAATaGGACCAACACTGTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: CWASSVTFPLVCTHLQQPRVGGE*DQHCAR Trigger: TCTAGCACAGTGTTGGTCCCATTCCCCACCTACCCT...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 90 bp | GTGGGTTGGCATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCTaGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: VGWHLFWVPFSFTLV*ILVPAVLCYLVQAL Trigger: CAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCCAATCCCTTCTGCCTTaGAAAGCTCTTGTACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CWASSVTFPLVCTHLQQPQSLLP*KALVPL Trigger: CAGGGGTACAAGAGCTTTCCAAGGCAGAAGGGATTG...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTAGATACACACCAGGCTaGGATGGAGCAGGAGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: HSGLDIGPCSSLLPGPSTRYTPG*DGAGGV Trigger: TACACCTCCTGCTCCATCCCAGCCTGGTGTGTATCT...AGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 90 bp | TGGCATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCTTGATATaGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: WHLFWVPFSFTLVLI*VPAVLCYLVQALDL Trigger: CAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCTCTTGTACCCCTGTaGAATGGGGGCTATGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFALVPL*NGGYED Trigger: GTCCTCATAGCCCCCATTTCACAGGGGTACAAGAGC...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCCTTGATATTGGTCCCTaGAGTTCTCTGCTACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CWASSVTFPLVCTHLQQPLDIGP*SSLLPG Trigger: ACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAG...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTACAGCTATACACACCTaGGGCTATGCCCTTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFTAIHT*GYALAQ Trigger: CTGGGCAAGGGCATAGCCCCAGGTGTGTATAGCTGT...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGAAGAGGATGTGGGTTaGCATCTTTTCTGGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFEEDVG*HLFWVP Trigger: GGGGACCCAGAAAAGATGCCAACCCACATCCTCTTC...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGTGTCTTTAGGGAAGTaGTTACAATGGAGCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: HSGLDIGPCSSLLPGPSTVSLGK*LQWSLR Trigger: TCTTAGGCTCCATTGTAATCACTTCCCTAAAGACAC...AGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTGGAAAGAGCTGGCTGAAGTCTTaGTTACTTTGTCTAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: IAPDSSHGLAVNPFCLGKSWLKS*LLCLEV Trigger: AACCTCTAGACAAAGTAACCAAGACTTCAGCCAGCT...CTTTCCAAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCTTGGCCACTGTTGGCTaGCTAGGTGGGGGCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DRLLGWACSGEGHATVRGLATVG*LGGGSA Trigger: GGCAGAGCCCCCACCTAGCAAGCCAACAGTGGCCAA...GCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| 3UTR GCA 72 bp | CAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATaGGACAGTGAGGGGCTCTCTATTGCTACACGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QTPGLGMLWGGS*DSEGLSIATRC Trigger: ACAGCGTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCAGACAGACTCCTGGGTaGGGCATGCTCTGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CWASSVTFPLVCTHLQQPRQTPG*GMLWGG Trigger: CCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCT...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGTCCCACAGCAATCCTaGATGAGTGCCAGCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IRQTPGLGMLWGGSCDSEVPQQS*MSASPV Trigger: GACAGGGCTGGCACTCATCAAGGATTGCTGTGGGAC...CTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| 3UTR TCA 72 bp | TGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTaGGGGGCTCTCTATTGCTACACGCTGTACAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: WVGHALGRVMRQ*GALYCYTLYRL Trigger: CAGTCTGTACAGCGTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| 3UTR GCA 72 bp | GTTGCACTGGGTGGTCCCACAGCAATCCTTGATGAGTaGCAGCCCTGTCTTGGCCACTGTTGGCTTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VALGGPTAILDE*QPCLGHCWLAR Trigger: CCTAGCAAGCCAACAGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| 3UTR CCA 72 bp | CTGGGGCACCCACATAGGGGCTACATGATGTTGCACTaGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGHPHRGYMMLH*VVPQQSLMSAS Trigger: GCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTGCAACATCATGTAGCCCCTATGTGGGTGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| 3UTR CCA 72 bp | CACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATaGCAAATCAAGGAAGAGCCTGGAGTCTGGCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: HSSLLCSTVGWA*QIKEEPGVWQI Trigger: TATCTGCCAGACTCCAGGCTCTTCCTTGATTTGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | TTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTaGGCATGGCAAATCAAGGAAGAGCCTGGAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FGHSSLLCSTVG*AWQIKEEPGVW Trigger: CCAGACTCCAGGCTCTTCCTTGATTTGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR-3UTR CAA 90 bp | ACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGTGTTGCCTTGGAAAGCTCTaGTACCCCTGTGAAATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TRHQTMGHSWVRLPVSVCCLGKL*YPCEMG Trigger: CCCCATTTCACAGGGGTACAAGAGCTTTCCAAGGCA...ACACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR TCA 72 bp | TCAGGCTTCCTGTCAGTGTGTGTTGGGCCAGCAGTGTaGCCTTCCCACTTGTATGTACTCATTTGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGFLSVCVGPAV*PSHLYVLICSS Trigger: GCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACAGGAAGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR GCA 72 bp | CCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTaGCTTGGAAAGCTCTTGTACCCCTGTGAAATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PDSSHGLAVNPF*LGKLLYPCEMG Trigger: CCCCATTTCACAGGGGTACAAGAGCTTTCCAAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| 3UTR CCA 72 bp | TTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTTaGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSATWSKHWICF*SQFPTLFHCGL Trigger: CAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | TCATTTGCAGCAGCCCTGGGTGAAGAGGATGTGGGTTaGCATCTTTTCTGGGTCCCCTTCTCATTCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFAAALGEEDVG*HLFWVPFSFTL Trigger: CAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | GAATTGTGGGGCTGGTTCAAACACGCCACCAGACAATaGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ELWGWFKHATRQ*DIVGSGFLSVC Trigger: ACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGTTTGAACCAGCCCCACAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTTGGTCTCAATCCCTTCTGCCTaGGAAAGCTCTTGTACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVPAVLCYLVQALDLLLVSIPSA*ESSCTP Trigger: AGGGGTACAAGAGCTTTCCAAGGCAGAAGGGATTGA...GACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR GCA 72 bp | CTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTaGTTTTGGTCACAGTTCCCTACTCTGTTCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LQFSATWSKHWI*FWSQFPTLFHC Trigger: ACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | GCCCTGGGTGAAGAGGATGTGGGTTGGCATCTTTTCTaGGTCCCCTTCTCATTCACTCTGGTCTTGATATTG | + |
|
Preference number: 3 (lower is better) Translates to: ALGEEDVGWHLF*VPFSFTLVLIL Trigger: CAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | TGTACTCATTTGCAGCAGCCCTGGGTGAAGAGGATGTaGGTTGGCATCTTTTCTGGGTCCCCTTCTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: CTHLQQPWVKRM*VGIFSGSPSHS Trigger: TGAATGAGAAGGGGACCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | ACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCTaGGTGAAGAGGATGTGGGTTGGCATCTTTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TFPLVCTHLQQP*VKRMWVGIFSG Trigger: CCCAGAAAAGATGCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR TCA 72 bp | ATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCTTaGTATTGGTCCCTGCAGTTCTCTGCTACCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: IFSGSPSHSLWS*YWSLQFSATWS Trigger: GGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTCTGGGGCACCCACATAGGGGCTACATGATGTTGCACTGGGTGGTCCCAGAAGTCTTGGTTACTTaGTCTAGAGGTTTTAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: IALGHPHRGYMMLHWVVPEVLVT*SRGFNL Trigger: CAAGTTAAAACCTCTAGACAAAGTAACCAAGACTTC...TGGGACCACCCAGTGCAACATCATGTAGCCCCTATGTGGGTGCCCCAGAGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| 3UTR GCA 72 bp | GAAATTCACAGCTATACACACCTGGGGCTATGCCCTTaGCCAGTTCGTTTGCATGGTAGGTTAGATACACCT | + |
|
Preference number: 3 (lower is better) Translates to: EIHSYTHLGLCP*PVRLHGRLDTP Trigger: AGGTGTATCTAACCTACCATGCAAACGAACTGGGCAAGGGCATAGCCCCAGGTGTGTATAGCTGTGAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCCACTGTGCTAGATTATaGAAATTCACAGCTATACAC | + |
|
Preference number: 3 (lower is better) Translates to: CWASSVTFPLVCTHLQQPHCARL*KFTAIH Trigger: GTGTATAGCTGTGAATTTCAATAATCTAGCACAGTG...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | GTATCTGACAGCAAAGCTGGGAGGGTAGGTGGGGAATaGGACCAACACTGTGCTAGATTATTGAAATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: VSDSKAGRVGGE*DQHCARLLKFT Trigger: TGTGAATTTCAATAATCTAGCACAGTGTTGGTCCCATTCCCCACCTACCCTCCCAGCTTTGCTGTCAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | CATACACGCACAGAGTTCACACAGGCTGTGCTGGGCTaGCCATTTAAAATGTACATCAAGTTACACAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: HTRTEFTQAVLG*PFKMYIKLHKT Trigger: CGTCTTGTGTAACTTGATGTACATTTTAAATGGCCAGCCCAGCACAGCCTGTGTGAACTCTGTGCGTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | TGTGCTAGATTATTGAAATTCACAGCTATACACACCTaGGGCTATGCCCTTGCCCAGTTCGTTTGCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CARLLKFTAIHT*GYALAQFVCMV Trigger: TACCATGCAAACGAACTGGGCAAGGGCATAGCCCCAGGTGTGTATAGCTGTGAATTTCAATAATCTAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CCA 72 bp | ACACACATACACGCACAGAGTTCACACAGGCTGTGCTaGGCTGGCCATTTAAAATGTACATCAAGTTACACA | + |
|
Preference number: 3 (lower is better) Translates to: THIHAQSSHRLC*AGHLKCTSSYT Trigger: TGTGTAACTTGATGTACATTTTAAATGGCCAGCCCAGCACAGCCTGTGTGAACTCTGTGCGTGTATGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR TCA 90 bp | CACTGGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTTGGCCACTCCGCCCCATAACGCCTaGGAGGCTTCTCGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HWVVPQQSLMSASPVLATPPHNA*EASRLP Trigger: TGGAAGCCGAGAAGCCTCTCAGGCGTTATGGGGCGG...AGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| CDS-3UTR GCA 90 bp | CACTGGGTGGTCCCACAGCAATCCTTGATGAGTGCCAGCCCTGTCTTGGCCACTTCCCTCCGCTTTCCATaGTGTCTCCTCCACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HWVVPQQSLMSASPVLATSLRFP*CLLHRP Trigger: GGGGCGGTGGAGGAGACAGCATGGAAAGCGGAGGGA...AGTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGCTGTGGGACCACCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| CDS-3UTR GCA 90 bp | GACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCATGGCGACCAAGTTCTaGAGCTCCTGCTTCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRLLGWACSGEGHATVRGMATKF*SSCFRS Trigger: GGACCTGAAGCAGGAGCTGCAGAACTTGGTCGCCAT...GCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTCTTGTACCCCTGTGAAATGGGGGCTATGAGGACAAGAGGGTGGGAGGAATCCCTCCGCTTTCCATaGTGTCTCCTCCACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLYPCEMGAMRTRGWEESLRFP*CLLHRP Trigger: GGGGCGGTGGAGGAGACAGCATGGAAAGCGGAGGGA...TTCCTCCCACCCTCTTGTCCTCATAGCCCCCATTTCACAGGGGTACAAGAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGTACATGATGTTGCACTaGGTGGTCCCACAGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RQTPGLGMLWGGSCDSEGYMMLH*VVPQQS Trigger: GGATTGCTGTGGGACCACCCAGTGCAACATCATGTA...CCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR TCA 90 bp | GACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCTTCTCGGCTTCCAGATaGACAGACAGAGATTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRLLGWACSGEGHATVRGFSASR*TDRDCF Trigger: AAAGCAATCTCTGTCTGTTCATCTGGAAGCCGAGAA...GCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTCCGCCCCATAACGCCTaGGAGGCTTCTCGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGLDIGPCSSLLPGPSTPPHNA*EASRLP Trigger: TGGAAGCCGAGAAGCCTCTCAGGCGTTATGGGGCGG...AGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCTGGGGCACCCACATAGGGGCTACATGATGTTGCACTGGGTGGTCCCACATGAACCTGAGTTCTaGCTCTCGACGGACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IALGHPHRGYMMLHWVVPHEPEF*LSTDQD Trigger: GTCCTGGTCCGTCGAGAGTCAGAACTCAGGTTCATG...TGGGACCACCCAGTGCAACATCATGTAGCCCCTATGTGGGTGCCCCAGAGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCTCTCTATTGCTACACCCTGCTTCAGGTCCATaGTGTCCTTGCAGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WACSGEGHATVRGSLLLHPASGP*CPCRAE Trigger: TTCAGCTCTGCAAGGACATCATGGACCTGAAGCAGG...GTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGACTCCTGGGTTGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGTTCTGTACCAGTCTGTaGATCTTCTGGATGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQTPGLGMLWGGSCDSEGFCTSL*IFWMSS Trigger: TGAGCTCATCCAGAAGATCCACAGACTGGTACAGAA...CCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCAACCCAGGAGTCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR CCA 90 bp | TTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTTGGTCTGTCTTGGCCACTGTTaGCTTGCTAGGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPAVLCYLVQALDLLLVCLGHC*LARWGL Trigger: GAGCCCCCACCTAGCAAGCCAACAGTGGCCAAGACA...GACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| 3UTR CAA 72 bp | GCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTaGCAGCAGCCCTGGGTGAAGAGGATGTGGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSVTFPLVCTH*QQPWVKRMWVG Trigger: GCCAACCCACATCCTCTTCACCCAGGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR TCA 90 bp | GTGGGGCTGGTTCAAACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTTCTCAGCCATGGAGATaGTGTCTAGCTGGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGLVQTRHQTMGHSWVRLSQPWR*CLAGFP Trigger: TGGGAAGCCAGCTAGACATCATCTCCATGGCTGAGA...AAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGTTTGAACCAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR GCA 90 bp | ACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGTGTGCAATCCTTGATGAGTaGCAGCCCTGTCTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRHQTMGHSWVRLPVSVCAILDE*QPCLGH Trigger: GTGGCCAAGACAGGGCTGGCACTCATCAAGGATTGC...ACACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR TCA 90 bp | CACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTCATGAACCTGAGTTCTaGCTCTCGACGGACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGLDIGPCSSLLPGPSTHEPEF*LSTDQD Trigger: GTCCTGGTCCGTCGAGAGTCAGAACTCAGGTTCATG...AGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR TCA 90 bp | CACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTTGCCCGGGAGCTGGCTaGAGTCTTGGTTACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSGLDIGPCSSLLPGPSTCPGAG*SLGYFV Trigger: GACAAAGTAACCAAGACTTCAGCCAGCTCCCGGGCA...AGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR GCA 90 bp | GTGGGGCTGGTTCAAACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTAAGTTCTGCAGCTCCTaGTTCAGGTCCATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLVQTRHQTMGHSWVRLKFCSS*FRSMMS Trigger: GGACATCATGGACCTGAAGCAGGAGCTGCAGAACTT...AAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGTTTGAACCAGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR GCA 90 bp | ATACCCATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTATGGCGACCAAGTTCTaGAGCTCCTGCTTCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPIAPDSSHGLAVNPFCLMATKF*SSCFRS Trigger: GGACCTGAAGCAGGAGCTGCAGAACTTGGTCGCCAT...AAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTATGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTTTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGCAACTTCACGGAGACGCTaGATTTTCGCCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICFWSQFPTLFHCGLGMATSRRR*IFAISS Trigger: GCTGGAGATGGCGAAAATCCAGCGTCTCCGTGAAGT...TGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTTCTCTGCCCGGGAGCTGGCTGAAGTCTTGGTTACTTTGTCTAGAGGTACTTCACGGAGACGCTaGATTTTCGCCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFFSARELAEVLVTLSRGTSRRR*IFAISS Trigger: GCTGGAGATGGCGAAAATCCAGCGTCTCCGTGAAGT...ACCTCTAGACAAAGTAACCAAGACTTCAGCCAGCTCCCGGGCAGAGAAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
||
| CDS-3UTR CCA 90 bp | ATACCCATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTTCCTGTTCCCTGGGATaGCGACCAAGTTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPIAPDSSHGLAVNPFCLSCSLG*RPSSAA Trigger: AGCTGCAGAACTTGGTCGCCATCCCAGGGAACAGGA...AAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTATGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| 3UTR CAA 72 bp | GTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTaGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLCYLVQALDLL*VTVPYSVPLWA Trigger: AGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR TCA 90 bp | ATACCCATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTCCTGCTTCAGGTCCATaGTGTCCTTGCAGAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: IPIAPDSSHGLAVNPFCLPASGP*CPCRAE Trigger: TTCAGCTCTGCAAGGACATCATGGACCTGAAGCAGG...AAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTATGGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS-3UTR GCA 90 bp | ATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTGGAAAGTCTCCTCTGGCATCATaGTGGTCTCAGCCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IAPDSSHGLAVNPFCLGKSPLAS*WSQPWR Trigger: TCTCCATGGCTGAGACCAGCATGATGCCAGAGGAGA...CTTTCCAAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS-3UTR TCA 90 bp | ATACCCATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTTGTGGATCTTCTGGATaGGCTCATCCTCTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IPIAPDSSHGLAVNPFCLCGSSG*AHPLSA Trigger: AGCAGAGAGAGGATGAGCTCATCCAGAAGATCCACA...AAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTATGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR TCA 90 bp | TGGGCATGCTCTGGGGAGGGTCATGCGACAGTGAGGGGCTCTCTATTGCTACACCTAGAGGTTTTAACTTaGTTCTCAGGAAATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WACSGEGHATVRGSLLLHLEVLT*FSGNQP Trigger: TGGCTGATTTCCTGAGAATCAAGTTAAAACCTCTAG...GTGTAGCAATAGAGAGCCCCTCACTGTCGCATGACCCTCCCCAGAGCATGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR CCA 90 bp | ACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGTGTAGTCTGTGGATCTTCTaGATGAGCTCATCCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TRHQTMGHSWVRLPVSVCSLWIF*MSSSSL Trigger: GAGAGAGGATGAGCTCATCCAGAAGATCCACAGACT...ACACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR CCA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTTGTTGGCTTGCTAGGTaGGGGCTCTGCCTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFCWLAR*GLCLLL Trigger: GAGAAGAAGGCAGAGCCCCCACCTAGCAAGCCAACA...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 72 bp | ATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTaGGAAAGCTCTTGTACCCCTGTGAAATGGGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: IAVMGLLSIPSA*ESSCTPVKWGL Trigger: TAGCCCCCATTTCACAGGGGTACAAGAGCTTTCCAAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| 3UTR CAA 72 bp | TTCTGGGTCCCCTTCTCATTCACTCTGGTCTTGATATaGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FWVPFSFTLVLI*VPAVLCYLVQA Trigger: TGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR TCA 90 bp | ACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGTGTTTCTCGGCTTCCAGATaGACAGACAGAGATTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TRHQTMGHSWVRLPVSVCFSASR*TDRDCF Trigger: AAAGCAATCTCTGTCTGTTCATCTGGAAGCCGAGAA...ACACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR TCA 90 bp | ACACGCCACCAGACAATGGGACATAGTTGGGTCAGGCTTCCTGTCAGTGTGTGTATGTCCTTGCAGAGCTaGATGTCATCCATCATGAAC | + |
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Preference number: 4 (lower is better) Translates to: TRHQTMGHSWVRLPVSVCMSLQS*MSSIMN Trigger: GTTCATGATGGATGACATTCAGCTCTGCAAGGACAT...ACACACACTGACAGGAAGCCTGACCCAACTATGTCCCATTGTCTGGTGGCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR CCA 90 bp | TTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGGATCTGCTTTTGGTCTTTCTTTTTCTGGGATaGCGACCAAGTTCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LVPAVLCYLVQALDLLLVFLFLG*RPSSAA Trigger: AGCTGCAGAACTTGGTCGCCATCCCAGAAAAAGAAA...GACCAAAAGCAGATCCAGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| 3UTR CAA 72 bp | CATCTTTTCTGGGTCCCCTTCTCATTCACTCTGGTCTaGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HLFWVPFSFTLV*ILVPAVLCYLV Trigger: GACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTGAATGAGAAGGGGACCCAGAAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR TCA 90 bp | ATAGCCCCTGATAGCAGTCATGGGCTTGCTGTCAATCCCTTCTGCCTTGGAAAGATGTCCTTGCAGAGCTaGATGTCATCCATCATGAAC | + |
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Preference number: 4 (lower is better) Translates to: IAPDSSHGLAVNPFCLGKMSLQS*MSSIMN Trigger: GTTCATGATGGATGACATTCAGCTCTGCAAGGACAT...CTTTCCAAGGCAGAAGGGATTGACAGCAAGCCCATGACTGCTATCAGGGGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS-3UTR GCA 90 bp | GCCCGGGAGCTGGCTGAAGTCTTGGTTACTTTGTCTAGAGGTTTTAACTTGATTAAGTTCTGCAGCTCCTaGTTCAGGTCCATGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: ARELAEVLVTLSRGFNLIKFCSS*FRSMMS Trigger: GGACATCATGGACCTGAAGCAGGAGCTGCAGAACTT...AATCAAGTTAAAACCTCTAGACAAAGTAACCAAGACTTCAGCCAGCTCCCGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118412.8 |
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| CDS-3UTR CCA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTAGCTGGCTGAAGTCTTaGTTACTTTGTCTAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFSWLKS*LLCLEV Trigger: AACCTCTAGACAAAGTAACCAAGACTTCAGCCAGCT...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR CAA 90 bp | ATCTGCTTTTGGTCACAGTTCCCTACTCTGTTCCACTGTGGGCTGGGCATGGCATTGGCCACTGTTGGCTaGCTAGGTGGGGGCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ICFWSQFPTLFHCGLGMALATVG*LGGGSA Trigger: GGCAGAGCCCCCACCTAGCAAGCCAACAGTGGCCAA...TGCCATGCCCAGCCCACAGTGGAACAGAGTAGGGAACTGTGACCAAAAGCAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS TCA 90 bp | CCAGCTCGATCTCCTCTGGCATCATGCTGGTCTCAGCCATGGAGATaGTGTCTAGCTGGCTTCCCAGTCCCTCCGCTTTCCATGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PARSPLASCWSQPWR*CLAGFPVPPLSMLS Trigger: AGACAGCATGGAAAGCGGAGGGACTGGGAAGCCAGCTAGACATCATCTCCATGGCTGAGACCAGCATGATGCCAGAGGAGATCGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS TCA 90 bp | GTCCCTCCGCTTTCCATGCTGTCTCCTCCACCGCCCCATAACGCCTaGGAGGCTTCTCGGCTTCCAGATGAACAGACAGAGATTGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: VPPLSMLSPPPPHNA*EASRLPDEQTEIAL Trigger: TAAAGCAATCTCTGTCTGTTCATCTGGAAGCCGAGAAGCCTCTCAGGCGTTATGGGGCGGTGGAGGAGACAGCATGGAAAGCGGAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS CCA 90 bp | AACCTGAGTTCTGACTCTCGACGGACCAGGACTTCACGGAGACGCTaGATTTTCGCCATCTCCAGCTCGATCTCCTCTGGCATCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: NLSSDSRRTRTSRRR*IFAISSSISSGIML Trigger: CAGCATGATGCCAGAGGAGATCGAGCTGGAGATGGCGAAAATCCAGCGTCTCCGTGAAGTCCTGGTCCGTCGAGAGTCAGAACTCAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGCAGCAGCCCAGTGCCAGCCCTGTCTaGGCCACTGTTGGCTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: CWASSVTFPLVCTHLQQPSASPV*ATVGLL Trigger: TAGCAAGCCAACAGTGGCCAAGACAGGGCTGGCACT...GGGCTGCTGCAAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS CCA 90 bp | ACCTCGGCATCATCCACCAGGAAGTCTCTCTTCTGTACCAGTCTGTaGATCTTCTGGATGAGCTCATCCTCTCTCTGCTTCTGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: TSASSTRKSLFCTSL*IFWMSSSSLCFCSL Trigger: CAAGCTGCAGAAGCAGAGAGAGGATGAGCTCATCCAGAAGATCCACAGACTGGTACAGAAGAGAGACTTCCTGGTGGATGATGCCGAGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000131608.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGTCCCACAGCAATCCTaGATGAGTGCCAGCCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFVPQQS*MSASPV Trigger: GACAGGGCTGGCACTCATCAAGGATTGCTGTGGGAC...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR CAA 90 bp | CACTCTGGTCTTGATATTGGTCCCTGCAGTTCTCTGCTACCTGGTCCAAGCACTGAGCTGGCTGAAGTCTaGGTTACTTTGTCTAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: HSGLDIGPCSSLLPGPSTELAEV*VTLSRG Trigger: ACCTCTAGACAAAGTAACCAAGACTTCAGCCAGCTC...AGTGCTTGGACCAGGTAGCAGAGAACTGCAGGGACCAATATCAAGACCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS-3UTR CAA 90 bp | TGTCAGTGTGTGTTGGGCCAGCAGTGTGACCTTCCCACTTGTATGTACTCATTTGAAGTCTTGGTTACTTaGTCTAGAGGTTTTAACTTG | + |
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Preference number: 5 (lower is better) Translates to: CQCVLGQQCDLPTCMYSFEVLVT*SRGFNL Trigger: CAAGTTAAAACCTCTAGACAAAGTAACCAAGACTTC...AAATGAGTACATACAAGTGGGAAGGTCACACTGCTGGCCCAACACACACTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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| CDS CCA 72 bp | TCTGACTCTCGACGGACCAGGACTTCACGGAGACGCTaGATTTTCGCCATCTCCAGCTCGATCTCCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SDSRRTRTSRRR*IFAISSSISSG Trigger: GCCAGAGGAGATCGAGCTGGAGATGGCGAAAATCCAGCGTCTCCGTGAAGTCCTGGTCCGTCGAGAGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS TCA 72 bp | CTTTCCATGCTGTCTCCTCCACCGCCCCATAACGCCTaGGAGGCTTCTCGGCTTCCAGATGAACAGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSMLSPPPPHNA*EASRLPDEQTE Trigger: CTCTGTCTGTTCATCTGGAAGCCGAGAAGCCTCTCAGGCGTTATGGGGCGGTGGAGGAGACAGCATGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS TCA 72 bp | TCTCCTCTGGCATCATGCTGGTCTCAGCCATGGAGATaGTGTCTAGCTGGCTTCCCAGTCCCTCCGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPLASCWSQPWR*CLAGFPVPPLS Trigger: GGAAAGCGGAGGGACTGGGAAGCCAGCTAGACATCATCTCCATGGCTGAGACCAGCATGATGCCAGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS CCA 72 bp | ATCATGCTGGTCTCAGCCATGGAGATGATGTCTAGCTaGCTTCCCAGTCCCTCCGCTTTCCATGCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IMLVSAMEMMSS*LPSPSAFHAVS Trigger: GGAGACAGCATGGAAAGCGGAGGGACTGGGAAGCCAGCTAGACATCATCTCCATGGCTGAGACCAGCATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000118412.8 |
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| CDS CCA 72 bp | TCATCCACCAGGAAGTCTCTCTTCTGTACCAGTCTGTaGATCTTCTGGATGAGCTCATCCTCTCTCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSTRKSLFCTSL*IFWMSSSSLCF Trigger: GAAGCAGAGAGAGGATGAGCTCATCCAGAAGATCCACAGACTGGTACAGAAGAGAGACTTCCTGGTGGATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056521.12 ENSMUST00000131608.2 |
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| CDS CAA 72 bp | TCTGCCTTCTTCTCTGCCCGGGAGCTGGCTGAAGTCTaGGTTACTTTGTCTAGAGGTTTTAACTTGATTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAFFSARELAEV*VTLSRGFNLIL Trigger: GAGAATCAAGTTAAAACCTCTAGACAAAGTAACCAAGACTTCAGCCAGCTCCCGGGCAGAGAAGAAGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056521.12 |
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