Pregenerated sensors for BLZF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026577Ensembl transcript IDs: ENSMUST00000027866.11, ENSMUST00000086032.4, ENSMUST00000120447.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATaGATATGGCCACACCCCTTTACAATGCATGGTTGGAGTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RLCCPTVKQPDSGKG*IWPHPFTMHGWSLP Trigger: AGGCAAACTCCAACCATGCATTGTAAAGGGGTGTGGCCATATCCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 90 bp | TGCTCTATAAAGGGATGGACTTTGCTAGCCACACACCGACTCTGCTaGCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGATATGG | + |
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Preference number: 1 (lower is better) Translates to: CSIKGWTLLATHRLC*PTVKQPDSGKGWIW Trigger: CCATATCCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAGCAAAGTCCATCCCTTTATAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 90 bp | ACTTGCTCTATAAAGGGATGGACTTTGCTAGCCACACACCGACTCTaGTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGATA | + |
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Preference number: 1 (lower is better) Translates to: TCSIKGWTLLATHRL*CPTVKQPDSGKGWI Trigger: TATCCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAGCAAAGTCCATCCCTTTATAGAGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR CCA 90 bp | TGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGATATaGCCACACCCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: CCPTVKQPDSGKGWI*PHPFTMHGWSLPGF Trigger: AAAACCAGGCAAACTCCAACCATGCATTGTAAAGGGGTGTGGCCATATCCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 90 bp | ATACACGTTGAGTGTGTGCGCATACCTGTCAAGGACAGAGGCTTATaGACTGAGTGTCTTCCTTCATCATTTTCCACCTTACTGTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: IHVECVRIPVKDRGL*TECLPSSFSTLLSE Trigger: CTCAGACAGTAAGGTGGAAAATGATGAAGGAAGACACTCAGTGCATAAGCCTCTGTCCTTGACAGGTATGCGCACACACTCAACGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR CCA 90 bp | ATTCTACAGACTACAGCATCTCTTCAGCCTCTGCCCACTTCTAACTaGGTAGGCTACTGTGTACCTCAATGCATGAATGCTTTTCAATTT | + |
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Preference number: 1 (lower is better) Translates to: ILQTTASLQPLPTSN*VGYCVPQCMNAFQF Trigger: AAATTGAAAAGCATTCATGCATTGAGGTACACAGTAGCCTACCCAGTTAGAAGTGGGCAGAGGCTGAAGAGATGCTGTAGTCTGTAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR TCA 90 bp | AGCATCCATGAACGACACTGCTTCAAAAACTTACACAAACATCTATaGCAGTGCCCAAGTTCTCTTGGCTATAAACCTAGAATGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: SIHERHCFKNLHKHL*QCPSSLGYKPRMVG Trigger: ACCCACCATTCTAGGTTTATAGCCAAGAGAACTTGGGCACTGTCATAGATGTTTGTGTAAGTTTTTGAAGCAGTGTCGTTCATGGATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR GCA 90 bp | CACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTaGAACCGTGCAAAGAAAGAACACCTCACCAAAACTAAACAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: HQYELVLMSLFPLSN*NRAKKEHLTKTKQH Trigger: ATGCTGTTTAGTTTTGGTGAGGTGTTCTTTCTTTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTCATGTTGTGTGGCAGCATTCTACAGACTACAGCATCTCTTCAGCCTCTGCCACACACCGACTCTaGTGCCCTACAGTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSHVVWQHSTDYSISSASATHRL*CPTVKQ Trigger: CTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGC...AGAGGCTGAAGAGATGCTGTAGTCTGTAGAATGCTGCCACACAACATGAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTCATGTTGTGTGGCAGCATTCTACAGACTACAGCATCTCTTCAGCCTCTACAGTCAGAGCCACCTaGAGACTGAGGCCAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GSHVVWQHSTDYSISSASTVRAT*RLRPKH Trigger: ATGCTTTGGCCTCAGTCTTCAGGTGGCTCTGACTGT...AGAGGCTGAAGAGATGCTGTAGTCTGTAGAATGCTGCCACACAACATGAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR CCA 90 bp | ACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGTGGTTGGAGTTTGCCTaGTTTTGCTTTATGCACCAA | + |
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Preference number: 2 (lower is better) Translates to: THRLCCPTVKQPDSGKGWWLEFA*FCFMHQ Trigger: TTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCA...CCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCATGTTGTGTGGCAGCATTCTACAGACTACAGCATCTCTTCAGCCTCTGCCCAAAGCATGCTCTTCTaGAAGGAAAGGGCACTAACC | + |
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Preference number: 2 (lower is better) Translates to: SHVVWQHSTDYSISSASAQSMLF*KERALT Trigger: GGTTAGTGCCCTTTCCTTTCAGAAGAGCATGCTTTG...GGCAGAGGCTGAAGAGATGCTGTAGTCTGTAGAATGCTGCCACACAACATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR TCA 90 bp | TCTCCACACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTGCTTACCCCAGTGTTTCTaGAGGCCTCTTGTGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: SPHQYELVLMSLFPLSNCLPQCF*RPLVYP Trigger: TGGGTACACAAGAGGCCTTCAGAAACACTGGGGTAA...GCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR CAA 90 bp | GTCTCCTGTTGTTCTCCACACCAATATGAGTTGGTGCTTATGAGTTaGTTTCCTTTGTCAAACTGCAACCGTGCAAAGAAAGAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: VSCCSPHQYELVLMS*FPLSNCNRAKKEHL Trigger: GAGGTGTTCTTTCTTTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGAACAACAGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR CAA 90 bp | CTAATAATTTGCTCATTTTGCAAGTATGTATGGCACACATACACGTaGAGTGTGTGCGCATACCTGTCAAGGACAGAGGCTTATGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LIICSFCKYVWHTYT*SVCAYLSRTEAYAL Trigger: CAGTGCATAAGCCTCTGTCCTTGACAGGTATGCGCACACACTCAACGTGTATGTGTGCCATACATACTTGCAAAATGAGCAAATTATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR TCA 90 bp | AATTTGCTCATTTTGCAAGTATGTATGGCACACATACACGTTGAGTGTGTGCGCAGTTACCACTTAGCTTaGAGCTCATCAACTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: NLLILQVCMAHIHVECVRSYHLA*SSSTQP Trigger: TGGCTGAGTTGATGAGCTTCAAGCTAAGTGGTAACT...GCGCACACACTCAACGTGTATGTGTGCCATACATACTTGCAAAATGAGCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTCATGTTGTGTGGCAGCATTCTACAGACTACAGCATCTCTTCAGCCTCTGAGTTTGCCTGGTTTTaGTTTATGCACCAAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSHVVWQHSTDYSISSASEFAWF*FMHQNE Trigger: TTCATTTTGGTGCATAAAGCAAAACCAGGCAAACTC...AGAGGCTGAAGAGATGCTGTAGTCTGTAGAATGCTGCCACACAACATGAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR GCA 90 bp | TATTCTTTAGTTTTAAAACACTTTCCTGCCCTTCTCCAGACCCTGGTACCAGTACAAATCCCTTTTTCATaGACCCCAGCTCTTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: YSLVLKHFPALLQTLVPVQIPFS*TPALLP Trigger: TGGTAGAAGAGCTGGGGTGCATGAAAAAGGGATTTG...TACTGGTACCAGGGTCTGGAGAAGGGCAGGAAAGTGTTTTAAAACTAAAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR CAA 90 bp | TGTTCTCCACACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTaGTCAAACTGCAACCGTGCAAAGAAAGAACACCTCACCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: CSPHQYELVLMSLFP*SNCNRAKKEHLTKT Trigger: AGTTTTGGTGAGGTGTTCTTTCTTTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR CAA 90 bp | CTTCTGAAAGGAAAGGGCACTAACCACAAAGAAATTGGACCTTTATaGCCATTTAAAGCCATAAAAATGGCTCAGATGAGTCAGACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLKGKGTNHKEIGPL*PFKAIKMAQMSQTK Trigger: TTTTGTCTGACTCATCTGAGCCATTTTTATGGCTTTAAATGGCAATAAAGGTCCAATTTCTTTGTGGTTAGTGCCCTTTCCTTTCAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR GCA 72 bp | AAGGGATGGACTTTGCTAGCCACACACCGACTCTGCTaGCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: KGWTLLATHRLC*PTVKQPDSGKG Trigger: TCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAGCAAAGTCCATCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 72 bp | ATAAAGGGATGGACTTTGCTAGCCACACACCGACTCTaGTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: IKGWTLLATHRL*CPTVKQPDSGK Trigger: TTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAGCAAAGTCCATCCCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR CCA 72 bp | TGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATaGATATGGCCACACCCCTTTACAATGCATGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: CPTVKQPDSGKG*IWPHPFTMHGW Trigger: CCAACCATGCATTGTAAAGGGGTGTGGCCATATCCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 72 bp | TGCAAGTATGTATGGCACACATACACGTTGAGTGTGTaGGCATACCTGTCAAGGACAGAGGCTTATGCACTG | + |
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Preference number: 3 (lower is better) Translates to: CKYVWHTYTLSV*AYLSRTEAYAL Trigger: CAGTGCATAAGCCTCTGTCCTTGACAGGTATGCGCACACACTCAACGTGTATGTGTGCCATACATACTTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR CCA 72 bp | ACTACAGCATCTCTTCAGCCTCTGCCCACTTCTAACTaGGTAGGCTACTGTGTACCTCAATGCATGAATGCT | + |
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Preference number: 3 (lower is better) Translates to: TTASLQPLPTSN*VGYCVPQCMNA Trigger: AGCATTCATGCATTGAGGTACACAGTAGCCTACCCAGTTAGAAGTGGGCAGAGGCTGAAGAGATGCTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR TCA 72 bp | TGTGCGCATACCTGTCAAGGACAGAGGCTTATGCACTaGGTGTCTTCCTTCATCATTTTCCACCTTACTGTC | + |
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Preference number: 3 (lower is better) Translates to: CAHTCQGQRLMH*VSSFIIFHLTV Trigger: GACAGTAAGGTGGAAAATGATGAAGGAAGACACTCAGTGCATAAGCCTCTGTCCTTGACAGGTATGCGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR GCA 72 bp | GCGGTAAAGGATGGATATGGCCACACCCCTTTACAATaGATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCA | + |
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Preference number: 3 (lower is better) Translates to: AVKDGYGHTPLQ*MVGVCLVLLYA Trigger: TGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGGGTGTGGCCATATCCATCCTTTACCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 72 bp | GAGTGTGTGCGCATACCTGTCAAGGACAGAGGCTTATaGACTGAGTGTCTTCCTTCATCATTTTCCACCTTA | + |
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Preference number: 3 (lower is better) Translates to: ECVRIPVKDRGL*TECLPSSFSTL Trigger: TAAGGTGGAAAATGATGAAGGAAGACACTCAGTGCATAAGCCTCTGTCCTTGACAGGTATGCGCACACACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTCATGTTGTGTGGCAGCATTCTACAGACTACAGCATCTCTTCAGCCTCTCCACACCAATATGAGTaGGTGCTTATGAGTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GSHVVWQHSTDYSISSASPHQYE*VLMSLF Trigger: AAACAAACTCATAAGCACCAACTCATATTGGTGTGG...AGAGGCTGAAGAGATGCTGTAGTCTGTAGAATGCTGCCACACAACATGAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR CAA 90 bp | ATAGTGTCTTCTGACCACACCTATCTAATCCCTGTACTGCATATGTCTGAACCCATGAGTTTGTTTCCTTaGTCAAACTGCAACCGTGCA | + |
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Preference number: 3 (lower is better) Translates to: IVSSDHTYLIPVLHMSEPMSLFP*SNCNRA Trigger: TGCACGGTTGCAGTTTGACAAAGGAAACAAACTCAT...GGGTTCAGACATATGCAGTACAGGGATTAGATAGGTGTGGTCAGAAGACACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR TCA 72 bp | CCTGTTGTTCTCCACACCAATATGAGTTGGTGCTTATaGGTTTGTTTCCTTTGTCAAACTGCAACCGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: PVVLHTNMSWCL*VCFLCQTATVQ Trigger: TTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGAACAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 72 bp | AATGTGACCATAAAGGGACTGCAAATCCCTTTTTCATaGACCCCAGCTCTTCTACCAGACTTGCTCTATAAA | + |
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Preference number: 3 (lower is better) Translates to: NVTIKGLQIPFS*TPALLPDLLYK Trigger: TTTATAGAGCAAGTCTGGTAGAAGAGCTGGGGTGCATGAAAAAGGGATTTGCAGTCCCTTTATGGTCACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR GCA 72 bp | CTTTCCTGCCCTTCTCCAGACCCTGGTACCAGTATTTaGCCATTTGTATCTAACCTAGTTCATGTAATATTC | + |
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Preference number: 3 (lower is better) Translates to: LSCPSPDPGTSI*PFVSNLVHVIF Trigger: GAATATTACATGAACTAGGTTAGATACAAATGGGCAAATACTGGTACCAGGGTCTGGAGAAGGGCAGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR CAA 90 bp | TATTCTTTAGTTTTAAAACACTTTCCTGCCCTTCTCCAGACCCTGGTACCAGTAATGCATGGTTGGAGTTaGCCTGGTTTTGCTTTATGC | + |
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Preference number: 3 (lower is better) Translates to: YSLVLKHFPALLQTLVPVMHGWS*PGFALC Trigger: GCATAAAGCAAAACCAGGCAAACTCCAACCATGCAT...TACTGGTACCAGGGTCTGGAGAAGGGCAGGAAAGTGTTTTAAAACTAAAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR GCA 72 bp | GAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTaGAACCGTGCAAAGAAAGAACACCTCACCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: ELVLMSLFPLSN*NRAKKEHLTKT Trigger: AGTTTTGGTGAGGTGTTCTTTCTTTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR-3UTR CAA 90 bp | GAAATTGGACCTTTATTGCCATTTAAAGCCATAAAAATGGCTCAGATGAGTCAGCACCAGATCTGCCTTTaGAAGATTTCTGATAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: EIGPLLPFKAIKMAQMSQHQICL*KISDRH Trigger: GTGCCTATCAGAAATCTTCAAAAGGCAGATCTGGTG...CTGACTCATCTGAGCCATTTTTATGGCTTTAAATGGCAATAAAGGTCCAATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR-3UTR CAA 90 bp | AATTTGCTCATTTTGCAAGTATGTATGGCACACATACACGTTGAGTGTGTGCGCCTTGTGCTTTTGTTGTaGTACACAAGAAGTCATAGT | + |
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Preference number: 3 (lower is better) Translates to: NLLILQVCMAHIHVECVRLVLLL*YTRSHS Trigger: ACTATGACTTCTTGTGTACAACAACAAAAGCACAAG...GCGCACACACTCAACGTGTATGTGTGCCATACATACTTGCAAAATGAGCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR TCA 72 bp | GAACGACACTGCTTCAAAAACTTACACAAACATCTATaGCAGTGCCCAAGTTCTCTTGGCTATAAACCTAGA | + |
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Preference number: 3 (lower is better) Translates to: ERHCFKNLHKHL*QCPSSLGYKPR Trigger: TCTAGGTTTATAGCCAAGAGAACTTGGGCACTGTCATAGATGTTTGTGTAAGTTTTTGAAGCAGTGTCGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR TCA 72 bp | TACTTGTGTACTGAGAATTCCATACATAGTGTCTTCTaGCCACACCTATCTAATCCCTGTACTGCATATGTC | + |
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Preference number: 3 (lower is better) Translates to: YLCTENSIHSVF*PHLSNPCTAYV Trigger: GACATATGCAGTACAGGGATTAGATAGGTGTGGTCAGAAGACACTATGTATGGAATTCTCAGTACACAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| 3UTR GCA 72 bp | CCTAGTTCATGTAATATTCATGTCAGGCATCAAGTGTaGATTTTAGAGGTTGAATGTATTCCTTGTCATATG | + |
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Preference number: 3 (lower is better) Translates to: PSSCNIHVRHQV*ILEVECIPCHM Trigger: CATATGACAAGGAATACATTCAACCTCTAAAATGCACACTTGATGCCTGACATGAATATTACATGAACTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR TCA 90 bp | CTAGCCACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGCTAGACGTTCAAAGTaGTACTGCGGGTCATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LATHRLCCPTVKQPDSGKARRSK*YCGSSP Trigger: TGGGGATGACCCGCAGTATCACTTTGAACGTCTAGC...TTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR CCA 90 bp | CCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTACACTCCTGCTCCTCGGATTaGGGTCGAAGTAAGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: PGSQIMTLGTEHGSNRLHSCSSD*GRSKDA Trigger: GGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGA...GTGTAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CCA 90 bp | TTTGCTAGCCACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGAGCTGTTCAGAAAGCTaGGCTGTGTTCCGACCTAGT | + |
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Preference number: 4 (lower is better) Translates to: FASHTPTLLPYSKAARQRSCSES*AVFRPS Trigger: ACTAGGTCGGAACACAGCCCAGCTTTCTGAACAGCT...CCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR TCA 90 bp | CCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTACACTTGGTGGGGATGTCGTaGGTGATAGCAGCTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PGSQIMTLGTEHGSNRLHLVGMS*VIAALG Trigger: TCCCAAAGCTGCTATCACTCACGACATCCCCACCAA...GTGTAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR GCA 90 bp | ACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGTTAGGGGAGTATGTCTaGTCTCTCCCCCACTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: THRLCCPTVKQPDSGKGWLGEYV*SLPHCK Trigger: CTTACAGTGGGGGAGAGAGCAGACATACTCCCCTAA...CCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR CCA 90 bp | CTAGCCACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAAGCTGTTCAGAAAGCTaGGCTGTGTTCCGACCTAGT | + |
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Preference number: 4 (lower is better) Translates to: LATHRLCCPTVKQPDSGKSCSES*AVFRPS Trigger: ACTAGGTCGGAACACAGCCCAGCTTTCTGAACAGCT...TTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR TCA 90 bp | CTAGCCACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAATGGAGTTCTTCTCTGTaGTGTCCTAGGGACTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LATHRLCCPTVKQPDSGKWSSSL*CPRDLT Trigger: GGTTAAGTCCCTAGGACATCACAGAGAAGAACTCCA...TTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGATCCTGCTCCTCGGATTaGGGTCGAAGTAAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRSCSSD*GRSKDA Trigger: GGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGA...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | AATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTATCCTGCTCCTCGGATTaGGGTCGAAGTAAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPGSQIMTLGTEHGSNRLSCSSD*GRSKDA Trigger: GGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGA...TAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGGGACACTTTCTTCCGTaGACTTGGAAGGACATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: THRLCCPTVKQPDSGKGWGHFLP*TWKDML Trigger: CAACATGTCCTTCCAAGTCCACGGAAGAAAGTGTCC...CCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTACACAGCTGTTCAGAAAGCTaGGCTGTGTTCCGACCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSQIMTLGTEHGSNRLHSCSES*AVFRPS Trigger: ACTAGGTCGGAACACAGCCCAGCTTTCTGAACAGCT...GTGTAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGAGCTAGACGTTCAAAGTaGTACTGCGGGTCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRARRSK*YCGSSP Trigger: TGGGGATGACCCGCAGTATCACTTTGAACGTCTAGC...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCTTCCATTCCATCTCCTaGTCCTCGGATTGGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLTNPGSQIMTLGTEHGSFHSIS*SSDWGR Trigger: TCGACCCCAATCCGAGGAGCAGGAGATGGAATGGAA...GGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | AATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTATTAGGGGAGTATGTCTaGTCTCTCCCCCACTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPGSQIMTLGTEHGSNRLLGEYV*SLPHCK Trigger: CTTACAGTGGGGGAGAGAGCAGACATACTCCCCTAA...TAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTACACTTTTCTAAGATGAGCTaGTTCTTCTCCCGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSQIMTLGTEHGSNRLHFSKMS*FFSRAR Trigger: TCTAGCCCGGGAGAAGAACCAGCTCATCTTAGAAAA...GTGTAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | AATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTATGGAGTTCTTCTCTGTaGTGTCCTAGGGACTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: NPGSQIMTLGTEHGSNRLWSSSL*CPRDLT Trigger: GGTTAAGTCCCTAGGACATCACAGAGAAGAACTCCA...TAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACCAGATGGGCATGTATTaGTTGTGCCAGTCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNQMGMY*LCQSMV Trigger: AACCATGGACTGGCACAAGCAATACATGCCCATCTG...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCATGGGTTGGACTCCGTaGGTGACTTCAACAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLTNPGSQIMTLGTEHGSMGWTP*VTSTDL Trigger: TAAGTCTGTTGAAGTCACCCACGGAGTCCAACCCAT...GGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACGGACACTTTCTTCCGTaGACTTGGAAGGACATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNGHFLP*TWKDML Trigger: CAACATGTCCTTCCAAGTCCACGGAAGAAAGTGTCC...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGCTTTCCACATCTGCTGGTAAGCAGAGCAGTTCCAGATTTCAGGCTTGCCTGCCATTACCCTGCTTaGAAGGAATTTACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCFPHLLVSRAVPDFRLACHYPA*KEFTSP Trigger: TGGAGAAGTAAATTCCTTGCAAGCAGGGTAATGGCA...GGCAAGCCTGAAATCTGGAACTGCTCTGCTTACCAGCAGATGTGGAAAGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| CDS-3UTR GCA 90 bp | CCTGTCAAGGACAGAGGCTTATGCACTGAGTGTCTTCCTTCATCATTTTCCACCCAGATGGGCATGTATTaGTTGTGCCAGTCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVKDRGLCTECLPSSFSTQMGMY*LCQSMV Trigger: AACCATGGACTGGCACAAGCAATACATGCCCATCTG...GGTGGAAAATGATGAAGGAAGACACTCAGTGCATAAGCCTCTGTCCTTGACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| CDS-3UTR TCA 90 bp | AATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTATGGGAACAAATATTCTaGCAGCTTCAACTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NPGSQIMTLGTEHGSNRLWEQIF*QLQLPL Trigger: CAGTGGAAGTTGAAGCTGTCAGAATATTTGTTCCCA...TAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGATGGGAACAAATATTCTaGCAGCTTCAACTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRWEQIF*QLQLPL Trigger: CAGTGGAAGTTGAAGCTGTCAGAATATTTGTTCCCA...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGCTCATTTTGCAAGTATGTATGGCACACATACACGTTGAGTGTGTGCGCTTGGTGGGGATGTCGTaGGTGATAGCAGCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLLILQVCMAHIHVECVRLVGMS*VIAALG Trigger: TCCCAAAGCTGCTATCACTCACGACATCCCCACCAA...GCGCACACACTCAACGTGTATGTGTGCCATACATACTTGCAAAATGAGCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| CDS-3UTR GCA 90 bp | ACCCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATTCCATTCCATCTCCTaGTCCTCGGATTGGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQCMVGVCLVLLYAPKFHSIS*SSDWGR Trigger: TCGACCCCAATCCGAGGAGCAGGAGATGGAATGGAA...TTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACTGCCATTACCCTGCTTaGAAGGAATTTACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNCHYPA*KEFTSP Trigger: TGGAGAAGTAAATTCCTTGCAAGCAGGGTAATGGCA...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACCATCTGCCATTACCCTaGTTGCAAGGAATTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNHLPLP*LQGIYF Trigger: GAAGTAAATTCCTTGCAAGCAGGGTAATGGCAGATG...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACATCTGCCATTACCCTaGTTGCAAGGAATTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRHLPLP*LQGIYF Trigger: GAAGTAAATTCCTTGCAAGCAGGGTAATGGCAGATG...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTACACGAATTCGACTGTTGTTaGAATCTTCTTTTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSQIMTLGTEHGSNRLHEFDCC*NLLLMA Trigger: AGCCATCAAAAGAAGATTCCAACAACAGTCGAATTC...GTGTAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCGCTGTAAAACCACTCTaGAGTTTGTTAACTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLTNPGSQIMTLGTEHGSAVKPL*SLLTHL Trigger: CAGATGAGTTAACAAACTTCAGAGTGGTTTTACAGC...GGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGAGCTGTAAAACCACTCTaGAGTTTGTTAACTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRAVKPL*SLLTHL Trigger: CAGATGAGTTAACAAACTTCAGAGTGGTTTTACAGC...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGAGTTGGAATCTTCTTTTaGTGGCTAATGCCAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRVGIFF*WLMPTF Trigger: GAATGTTGGCATTAGCCATCAAAAGAAGATTCCAAC...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACTCCTTTCAGAATTCTTaGGCTTTTCCAAAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNSFQNS*AFPKPS Trigger: AGAAGGTTTTGGAAAAGCTCAAGAATTCTGAAAGGA...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | TATTCTTTAGTTTTAAAACACTTTCCTGCCCTTCTCCAGACCCTGGTACCAGTATTAGGGGAGTATGTCTaGTCTCTCCCCCACTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSLVLKHFPALLQTLVPVLGEYV*SLPHCK Trigger: CTTACAGTGGGGGAGAGAGCAGACATACTCCCCTAA...TACTGGTACCAGGGTCTGGAGAAGGGCAGGAAAGTGTTTTAAAACTAAAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| CDS-3UTR GCA 90 bp | ACCCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAACAGATGGGCATGTATTaGTTGTGCCAGTCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQCMVGVCLVLLYAPKQMGMY*LCQSMV Trigger: AACCATGGACTGGCACAAGCAATACATGCCCATCTG...TTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACTTTCTTCCGTGGACTTaGAAGGACATGTTGATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNFLPWT*KDMLIY Trigger: ATAAATCAACATGTCCTTCCAAGTCCACGGAAGAAA...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCACACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTGCTGGAGTTCTTCTCTGTaGTGTCCTAGGGACTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPHQYELVLMSLFPLSNCWSSSL*CPRDLT Trigger: GGTTAAGTCCCTAGGACATCACAGAGAAGAACTCCA...GCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCAAGGACAGAGGCTTATGCACTGAGTGTCTTCCTTCATCATTTTCCACCTCCTTTCAGAATTCTTaGGCTTTTCCAAAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVKDRGLCTECLPSSFSTSFQNS*AFPKPS Trigger: AGAAGGTTTTGGAAAAGCTCAAGAATTCTGAAAGGA...GGTGGAAAATGATGAAGGAAGACACTCAGTGCATAAGCCTCTGTCCTTGACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| CDS-3UTR CCA 90 bp | TCTCCACACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTGCATGGGTTGGACTCCGTaGGTGACTTCAACAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPHQYELVLMSLFPLSNCMGWTP*VTSTDL Trigger: TAAGTCTGTTGAAGTCACCCACGGAGTCCAACCCAT...GCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTGCGGACACTTTCTTCCGTaGACTTGGAAGGACATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPHQYELVLMSLFPLSNCGHFLP*TWKDML Trigger: CAACATGTCCTTCCAAGTCCACGGAAGAAAGTGTCC...GCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| 3UTR CAA 72 bp | ACTTACACAAACATCTATGACAGTGCCCAAGTTCTCTaGGCTATAAACCTAGAATGGTGGGTCAGGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TYTNIYDSAQVL*AINLEWWVRQD Trigger: ATCTTGCCTGACCCACCATTCTAGGTTTATAGCCAAGAGAACTTGGGCACTGTCATAGATGTTTGTGTAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| CDS-3UTR TCA 90 bp | CCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGTGGGAACAAATATTCTaGCAGCTTCAACTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PFTMHGWSLPGFALCTKMWEQIF*QLQLPL Trigger: CAGTGGAAGTTGAAGCTGTCAGAATATTTGTTCCCA...CATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGTGCCATTACCCTGCTTaGAAGGAATTTACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFTMHGWSLPGFALCTKMCHYPA*KEFTSP Trigger: TGGAGAAGTAAATTCCTTGCAAGCAGGGTAATGGCA...CATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | TACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGAAACCTTTTCTAAGATGAGCTaGTTCTTCTCCCGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNAWLEFAWFCFMHQNETFSKMS*FFSRAR Trigger: TCTAGCCCGGGAGAAGAACCAGCTCATCTTAGAAAA...GGTTTCATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| 3UTR CAA 72 bp | CACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTaGTCAAACTGCAACCGTGCAAAGAAAGAACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQYELVLMSLFP*SNCNRAKKEHL Trigger: GAGGTGTTCTTTCTTTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | TACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGAAACCGCTGTAAAACCACTCTaGAGTTTGTTAACTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YNAWLEFAWFCFMHQNETAVKPL*SLLTHL Trigger: CAGATGAGTTAACAAACTTCAGAGTGGTTTTACAGC...GGTTTCATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR TCA 90 bp | TACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGAAACCGTTGGAATCTTCTTTTaGTGGCTAATGCCAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: YNAWLEFAWFCFMHQNETVGIFF*WLMPTF Trigger: GAATGTTGGCATTAGCCATCAAAAGAAGATTCCAAC...GGTTTCATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGTTTCTTCCGTGGACTTaGAAGGACATGTTGATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFTMHGWSLPGFALCTKMFLPWT*KDMLIY Trigger: ATAAATCAACATGTCCTTCCAAGTCCACGGAAGAAA...CATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
||
| CDS-3UTR CCA 90 bp | GAAATTGGACCTTTATTGCCATTTAAAGCCATAAAAATGGCTCAGATGAGTCAGTTTTCTAAGATGAGCTaGTTCTTCTCCCGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIGPLLPFKAIKMAQMSQFSKMS*FFSRAR Trigger: TCTAGCCCGGGAGAAGAACCAGCTCATCTTAGAAAA...CTGACTCATCTGAGCCATTTTTATGGCTTTAAATGGCAATAAAGGTCCAATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
||
| 3UTR CAA 72 bp | TGTTCTCCACACCAATATGAGTTGGTGCTTATGAGTTaGTTTCCTTTGTCAAACTGCAACCGTGCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSPHQYELVLMS*FPLSNCNRAKK Trigger: TTTCTTTGCACGGTTGCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR TCA 90 bp | TACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGAAACCTCCTTTCAGAATTCTTaGGCTTTTCCAAAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNAWLEFAWFCFMHQNETSFQNS*AFPKPS Trigger: AGAAGGTTTTGGAAAAGCTCAAGAATTCTGAAAGGA...GGTTTCATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR GCA 90 bp | GAAATTGGACCTTTATTGCCATTTAAAGCCATAAAAATGGCTCAGATGAGTCAGCATCTGCCATTACCCTaGTTGCAAGGAATTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIGPLLPFKAIKMAQMSQHLPLP*LQGIYF Trigger: GAAGTAAATTCCTTGCAAGCAGGGTAATGGCAGATG...CTGACTCATCTGAGCCATTTTTATGGCTTTAAATGGCAATAAAGGTCCAATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR CCA 90 bp | TACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAATGAAACCGAATTCGACTGTTGTTaGAATCTTCTTTTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNAWLEFAWFCFMHQNETEFDCC*NLLLMA Trigger: AGCCATCAAAAGAAGATTCCAACAACAGTCGAATTC...GGTTTCATTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| 3UTR CAA 72 bp | GGAAAGGGCACTAACCACAAAGAAATTGGACCTTTATaGCCATTTAAAGCCATAAAAATGGCTCAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKGTNHKEIGPL*PFKAIKMAQMS Trigger: ACTCATCTGAGCCATTTTTATGGCTTTAAATGGCAATAAAGGTCCAATTTCTTTGTGGTTAGTGCCCTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR TCA 90 bp | GAAATTGGACCTTTATTGCCATTTAAAGCCATAAAAATGGCTCAGATGAGTCAGGTTGGAATCTTCTTTTaGTGGCTAATGCCAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: EIGPLLPFKAIKMAQMSQVGIFF*WLMPTF Trigger: GAATGTTGGCATTAGCCATCAAAAGAAGATTCCAAC...CTGACTCATCTGAGCCATTTTTATGGCTTTAAATGGCAATAAAGGTCCAATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS CCA 90 bp | GCTTGTGCCAGTCCATGGTTCGTGAGTGCTAAGTCTGCCGTGCTATaGGGCTGTGTGTTAGGGGAGTATGTCTGCTCTCTCCCCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: ACASPWFVSAKSAVL*GCVLGEYVCSLPHC Trigger: ACAGTGGGGGAGAGAGCAGACATACTCCCCTAACACACAGCCCCATAGCACGGCAGACTTAGCACTCACGAACCATGGACTGGCACAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | ACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGACAGATGGGCATGTATaGCTTGTGCCAGTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: THRLCCPTVKQPDSGKGWTDGHV*LVPVHG Trigger: ACCATGGACTGGCACAAGCAATACATGCCCATCTGT...CCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | CTAGCCACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAATGTTGATTTATGGGTaGGACTCCGTGGGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LATHRLCCPTVKQPDSGKMLIYG*DSVGDF Trigger: GAAGTCACCCACGGAGTCCAACCCATAAATCAACAT...TTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS CCA 90 bp | CTTAGGGGGCTCCTCCGTTTCCATTCCATCTCCTGCTCCTCGGATTaGGGTCGAAGTAAGGATGCCTTTCATCATTTCTTGTTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRGLLRFHSISCSSD*GRSKDAFHHFLFPF Trigger: AAAGGGAAACAAGAAATGATGAAAGGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGAGATGGAATGGAAACGGAGGAGCCCCCTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR CAA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGAACAGATGGGCATGTATaGCTTGTGCCAGTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRTDGHV*LVPVHG Trigger: ACCATGGACTGGCACAAGCAATACATGCCCATCTGT...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS TCA 90 bp | CGTTCACTCAGGAGATCCTGGATAGCGCTCTGGGCATCTCGGTTCTaGCGCTGTAAAACCACTCTGAAGTTTGTTAACTCATCTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RSLRRSWIALWASRF*RCKTTLKFVNSSAI Trigger: AATGGCAGATGAGTTAACAAACTTCAGAGTGGTTTTACAGCGTCAGAACCGAGATGCCCAGAGCGCTATCCAGGATCTCCTGAGTGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | AATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTAATGTTGATTTATGGGTaGGACTCCGTGGGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPGSQIMTLGTEHGSNRLMLIYG*DSVGDF Trigger: GAAGTCACCCACGGAGTCCAACCCATAAATCAACAT...TAGTCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | ACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAGGATGGCTCCTTTCAGAATTCTaGAGCTTTTCCAAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THRLCCPTVKQPDSGKGWLLSEF*SFSKTF Trigger: GAAGGTTTTGGAAAAGCTCAAGAATTCTGAAAGGAG...CCATCCTTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | ATTCTACAGACTACAGCATCTCTTCAGCCTCTGCCCACTTCTAACTGGGTAGGCCTGCCATTACCCTGCTaGCAAGGAATTTACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILQTTASLQPLPTSNWVGLPLPC*QGIYFS Trigger: GGAGAAGTAAATTCCTTGCAAGCAGGGTAATGGCAG...GCCTACCCAGTTAGAAGTGGGCAGAGGCTGAAGAGATGCTGTAGTCTGTAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR CAA 90 bp | ACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGACTGCCATTACCCTGCTaGCAAGGAATTTACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNPGSQIMTLGTEHGSNRLPLPC*QGIYFS Trigger: GGAGAAGTAAATTCCTTGCAAGCAGGGTAATGGCAG...TCTGTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | CTAGCCACACACCGACTCTGCTGCCCTACAGTAAAGCAGCCAGACAGCGGTAAAAGAATTCGACTGTTGTaGGAATCTTCTTTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LATHRLCCPTVKQPDSGKRIRLL*ESSFDG Trigger: GCCATCAAAAGAAGATTCCAACAACAGTCGAATTCT...TTTACCGCTGTCTGGCTGCTTTACTGTAGGGCAGCAGAGTCGGTGTGTGGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS TCA 90 bp | GAGACCAAGAGTTCTTCCAAAAATTTTTGGGTAGAGGTCATTTCCTaGCGAAACTGCTCTCGTTCACTCAGGAGATCCTGGATAGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETKSSSKNFWVEVIS*RNCSRSLRRSWIAL Trigger: GAGCGCTATCCAGGATCTCCTGAGTGAACGAGAGCAGTTTCGTCAGGAAATGACCTCTACCCAAAAATTTTTGGAAGAACTCTTGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | CAACTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCCTCCTTTCAGAATTCTaGAGCTTTTCCAAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLTNPGSQIMTLGTEHGSLLSEF*SFSKTF Trigger: GAAGGTTTTGGAAAAGCTCAAGAATTCTGAAAGGAG...GGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | CTTACTAATCCGGGCTCCCAAATAATGACTCTGGGTACTGAGCATGGCTCCAACAGAATTCGACTGTTGTaGGAATCTTCTTTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTNPGSQIMTLGTEHGSNRIRLL*ESSFDG Trigger: GCCATCAAAAGAAGATTCCAACAACAGTCGAATTCT...GTTGGAGCCATGCTCAGTACCCAGAGTCATTATTTGGGAGCCCGGATTAGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | ACCCCTTTACAATGCATGGTTGGAGTTTGCCTGGTTTTGCTTTATGCACCAAAACTGCCATTACCCTGCTaGCAAGGAATTTACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPLQCMVGVCLVLLYAPKLPLPC*QGIYFS Trigger: GGAGAAGTAAATTCCTTGCAAGCAGGGTAATGGCAG...TTTTGGTGCATAAAGCAAAACCAGGCAAACTCCAACCATGCATTGTAAAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS-3UTR CAA 90 bp | TATTCTTTAGTTTTAAAACACTTTCCTGCCCTTCTCCAGACCCTGGTACCAGTAACAGATGGGCATGTATaGCTTGTGCCAGTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: YSLVLKHFPALLQTLVPVTDGHV*LVPVHG Trigger: ACCATGGACTGGCACAAGCAATACATGCCCATCTGT...TACTGGTACCAGGGTCTGGAGAAGGGCAGGAAAGTGTTTTAAAACTAAAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR CAA 90 bp | GGTTCTCATGTTGTGTGGCAGCATTCTACAGACTACAGCATCTCTTCAGCCTCTAGAATTCGACTGTTGTaGGAATCTTCTTTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSHVVWQHSTDYSISSASRIRLL*ESSFDG Trigger: GCCATCAAAAGAAGATTCCAACAACAGTCGAATTCT...AGAGGCTGAAGAGATGCTGTAGTCTGTAGAATGCTGCCACACAACATGAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS-3UTR CAA 90 bp | TCTCCACACCAATATGAGTTGGTGCTTATGAGTTTGTTTCCTTTGTCAAACTGCATGTTGATTTATGGGTaGGACTCCGTGGGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPHQYELVLMSLFPLSNCMLIYG*DSVGDF Trigger: GAAGTCACCCACGGAGTCCAACCCATAAATCAACAT...GCAGTTTGACAAAGGAAACAAACTCATAAGCACCAACTCATATTGGTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027866.11 ENSMUST00000120447.8 |
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| CDS GCA 72 bp | AGACTTAGGGGGCTCCTCCGTTTCCATTCCATCTCCTaGTCCTCGGATTGGGGTCGAAGTAAGGATGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLRGLLRFHSIS*SSDWGRSKDAF Trigger: AAAGGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGAGATGGAATGGAAACGGAGGAGCCCCCTAAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS CCA 72 bp | CTCCTCCGTTTCCATTCCATCTCCTGCTCCTCGGATTaGGGTCGAAGTAAGGATGCCTTTGTTTTCCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: LLRFHSISCSSD*GRSKDAFVFRT Trigger: AGTTCGGAAAACAAAGGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGAGATGGAATGGAAACGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS CCA 72 bp | CTCCTCCGTTTCCATTCCATCTCCTGCTCCTCGGATTaGGGTCGAAGTAAGGATGCCTTTCATCATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRFHSISCSSD*GRSKDAFHHFL Trigger: CAAGAAATGATGAAAGGCATCCTTACTTCGACCCCAATCCGAGGAGCAGGAGATGGAATGGAAACGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027866.11 |
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| CDS TCA 72 bp | GAGGACACTTTCTTCCGTGGACTTGGAAGGACATGTTaGTTTATGGGTTGGACTCCGTGGGTGACTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: EDTFFRGLGRTC*FMGWTPWVTST Trigger: TGTTGAAGTCACCCACGGAGTCCAACCCATAAATCAACATGTCCTTCCAAGTCCACGGAAGAAAGTGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS TCA 72 bp | AGGAGATCCTGGATAGCGCTCTGGGCATCTCGGTTCTaGCGCTGTAAAACCACTCTGAAGTTTGTTAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRSWIALWASRF*RCKTTLKFVNS Trigger: TGAGTTAACAAACTTCAGAGTGGTTTTACAGCGTCAGAACCGAGATGCCCAGAGCGCTATCCAGGATCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS CCA 72 bp | AAATTGGTTGTCCGGAGAGCTCTCTGTACAGGCAACTaGATCCAAAATCCGCAGAACCTTTTCAGCCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: KLVVRRALCTGN*IQNPQNLFSHF Trigger: AAAATGGCTGAAAAGGTTCTGCGGATTTTGGATCCAGTTGCCTGTACAGAGAGCTCTCCGGACAACCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS TCA 72 bp | AGGGACTTAACCTTTGTGTTCTTGGTGGGGATGTCGTaGGTGATAGCAGCTTTGGGAACAAATATTCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RDLTFVFLVGMS*VIAALGTNILT Trigger: TGTCAGAATATTTGTTCCCAAAGCTGCTATCACTCACGACATCCCCACCAAGAACACAAAGGTTAAGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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| CDS TCA 72 bp | AGTTCTTCCAAAAATTTTTGGGTAGAGGTCATTTCCTaGCGAAACTGCTCTCGTTCACTCAGGAGATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSKNFWVEVIS*RNCSRSLRRSW Trigger: CCAGGATCTCCTGAGTGAACGAGAGCAGTTTCGTCAGGAAATGACCTCTACCCAAAAATTTTTGGAAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027866.11 ENSMUST00000086032.4 ENSMUST00000120447.8 |
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