Pregenerated sensors for BLVRB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040466Ensembl transcript IDs: ENSMUST00000037399.16, ENSMUST00000108357.8, ENSMUST00000108358.8, ENSMUST00000133750.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCAAAATTTCTCAGGATGCATaGCCCTCCCCACCTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LNIQLCVGLPSTGKTLTKISQDA*PSPPRS Trigger: TGACCTAGGTGGGGAGGGTCATGCATCCTGAGAAAT...TTTGGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR TCA 90 bp | GGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCCTGCGCCAGTGTGGTaGGCCCGGTCCTGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GKTLTKIITDRERKIRVRPAPVW*ARSCRW Trigger: CCACCGGCAGGACCGGGCTCACCACACTGGCGCAGG...CCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR TCA 90 bp | ACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTTTAGTACCTGCGCCAGTGTGGTaGGCCCGGTCCTGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TWDSFNTVFQRTGAACLVPAPVW*ARSCRW Trigger: CCACCGGCAGGACCGGGCTCACCACACTGGCGCAGG...TACTAAACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR TCA 90 bp | AGCACGGGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGTGGCTGGGGTCCTTCTaGCGGCAGCCTGCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: STGKTLTKIITDRERKIRWLGSF*RQPAGV Trigger: GACTCCAGCAGGCTGCCGTCAGAAGGACCCCAGCCA...CCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACCCGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | ACGGGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTCCTGCTTGCACCGCCTaGGCCAGTGTGGTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TGKTLTKIITDRERKIRVPACTA*ASVVSP Trigger: CGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGG...AACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | GTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTCCTGCTTGCACCGCCTaGGCCAGTGTGGTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VITWDSFNTVFQRTGAACPACTA*ASVVSP Trigger: CGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGG...ACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR TCA 90 bp | GTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTTGGCTGGGGTCCTTCTaGCGGCAGCCTGCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VITWDSFNTVFQRTGAACWLGSF*RQPAGV Trigger: GACTCCAGCAGGCTGCCGTCAGAAGGACCCCAGCCA...ACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR GCA 90 bp | CTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCAAAGTAGGAAGGCCGAGGTaGAGGCCACGACCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LNIQLCVGLPSTGKTLTKVGRPR*RPRPCP Trigger: TGGACAAGGTCGTGGCCTGCACCTCGGCCTTCCTAC...TTTGGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | GGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGGCCCGGTCCTGCCGGTaGCACCGAAGATCGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: GKTLTKIITDRERKIRVRARSCR*HRRSRS Trigger: AGATCGCGATCTTCGGTGCCACCGGCAGGACCGGGC...CCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | GTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTGCCCGGTCCTGCCGGTaGCACCGAAGATCGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: VITWDSFNTVFQRTGAACARSCR*HRRSRS Trigger: AGATCGCGATCTTCGGTGCCACCGGCAGGACCGGGC...ACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR GCA 90 bp | GGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGTCCACATCGGCCGCCTaGCGAACATCTCCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GKTLTKIITDRERKIRVRSTSAA*RTSPTT Trigger: GGTGGTGGGAGATGTTCGGCAGGCGGCCGATGTGGA...CCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | TGTGTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTCCACATCGGCCGCCTaGCGAACATCTCCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: CVITWDSFNTVFQRTGAASTSAA*RTSPTT Trigger: GGTGGTGGGAGATGTTCGGCAGGCGGCCGATGTGGA...AGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR GCA 90 bp | ACGGGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTTCATCGGTCACGTCCTaGAGGCGTGGGGGCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: TGKTLTKIITDRERKIRVSSVTS*RRGGTL Trigger: CAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGA...AACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | TGTGTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTACCACCCACCCGAGGTaGAGGCCACGACCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CVITWDSFNTVFQRTGAATTHPR*RPRPCP Trigger: TGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGT...AGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR CCA 90 bp | ACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGACACGTCCTGCAGGCGTaGGGGCACCTTGGTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKIITDRERKIRVRLPERHVLQA*GHLGRV Trigger: GACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTG...TCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR TCA 90 bp | GGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGGGTCATGCTTGGATATaGCCCTCGAGGGCCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKTLTKIITDRERKIRVRGHAWI*PSRALV Trigger: GACGAGGGCCCTCGAGGGTCATATCCAAGCATGACC...CCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | ACGGGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTTCTCCCACCACCACATaGGCTGGCTGGGGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGKTLTKIITDRERKIRVSPTTT*AGWGPS Trigger: AGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGA...AACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | GTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTTCTCCCACCACCACATaGGCTGGCTGGGGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VITWDSFNTVFQRTGAACSPTTT*AGWGPS Trigger: AGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGA...ACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR GCA 90 bp | GGACTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCTTCAGCCCTGACTCTTaGAGAATCTTATGCATCCGG | + |
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Preference number: 4 (lower is better) Translates to: GLNIQLCVGLPSTGKTLTFSPDS*RILCIR Trigger: CCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAA...GGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | ACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGAGGCGTGGGGGCACCTTaGTCGGGTCCCATAGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: TKIITDRERKIRVRLPERGVGAP*SGPIVG Trigger: TCCTACTATGGGACCCGACCAAGGTGCCCCCACGCC...TCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | CTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCAAATTATGCATCCGGATGTaGTCATCGGTCACGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LNIQLCVGLPSTGKTLTKLCIRM*SSVTSC Trigger: GCAGGACGTGACCGATGACCACATCCGGATGCATAA...TTTGGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | ACGGGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTACGATGACAGCTTCCTaGCCAGCCACAGTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TGKTLTKIITDRERKIRVTMTAS*PATVLS Trigger: GGACAAGACTGTGGCTGGGCAGGAAGCTGTCATCGT...AACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | ACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGAATTTGAAGCTTTTGGCGCCCCAGTTAGTGGTTaGTCTCCTATGTGTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TERGKSGLGFLKEFEAFGAPVSG*SPMCGG Trigger: GCCCCCACACATAGGAGACCAACCACTAACTGGGGC...GCCAAAAGCTTCAAATTCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | ACGGGTAAGACGCTGACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTGGTGGGAGGGGTAGGTaGTGTGTCCGTCATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: TGKTLTKIITDRERKIRVGGRGR*CVRHTH Trigger: ATGAGTATGACGGACACACCACCTACCCCTCCCACC...AACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGTCAGCGTCTTACCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CCA 90 bp | ACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGAATTTGAAGCTTTTGGCCTCCATGTGCCTTCATaGCTGTCACGATGTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TERGKSGLGFLKEFEAFGLHVPS*LSRCSG Trigger: CCCGGAACATCGTGACAGCCATGAAGGCACATGGAG...GCCAAAAGCTTCAAATTCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | ACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGACTTGTCCACTCCATGTaGCTTCATGGCTGTCACGAT | + |
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Preference number: 4 (lower is better) Translates to: TKIITDRERKIRVRLPERLVHSM*LHGCHD Trigger: ATCGTGACAGCCATGAAGGCACATGGAGTGGACAAG...TCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR GCA 90 bp | ATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTTTACTTGTCCACTCCATGTaGCTTCATGGCTGTCACGAT | + |
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Preference number: 4 (lower is better) Translates to: ITWDSFNTVFQRTGAACLLVHSM*LHGCHD Trigger: ATCGTGACAGCCATGAAGGCACATGGAGTGGACAAG...TAAACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS GCA 90 bp | CGGCAGCCTGCTGGAGTCTCGAACCAGCACCGTCACCTCATAACCTaGTTGCACCGCCTGCGCCAGTGTGGTGAGCCCGGTCCTGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: RQPAGVSNQHRHLIT*LHRLRQCGEPGPAG Trigger: ACCGGCAGGACCGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGGTGACGGTGCTGGTTCGAGACTCCAGCAGGCTGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS CCA 90 bp | ACATCGGCCGCCTGCCGAACATCTCCCACCACCACATGGGCTGGCTaGGGTCCTTCTGACGGCAGCCTGCTGGAGTCTCGAACCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: TSAACRTSPTTTWAG*GPSDGSLLESRTST Trigger: GGTGCTGGTTCGAGACTCCAGCAGGCTGCCGTCAGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGATGTTCGGCAGGCGGCCGATGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS CCA 90 bp | TCCGGATGTGGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTTaGTCGGGTCCCATAGTAGGAAGGCCGAGGTGCAGGCCACGACCT | + |
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Preference number: 5 (lower is better) Translates to: SGCGHRSRPAGVGAP*SGPIVGRPRCRPRP Trigger: AGGTCGTGGCCTGCACCTCGGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS CCA 90 bp | GTCTTGTCCACATCGGCCGCCTGCCGAACATCTCCCACCACCACATaGGCTGGCTGGGGTCCTTCTGACGGCAGCCTGCTGGAGTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: VLSTSAACRTSPTTT*AGWGPSDGSLLESR Trigger: TCGAGACTCCAGCAGGCTGCCGTCAGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGATGTTCGGCAGGCGGCCGATGTGGACAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS TCA 90 bp | CTGCCGAACATCTCCCACCACCACATGGGCTGGCTGGGGTCCTTCTaGCGGCAGCCTGCTGGAGTCTCGAACCAGCACCGTCACCTCATA | + |
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Preference number: 5 (lower is better) Translates to: LPNISHHHMGWLGSF*RQPAGVSNQHRHLI Trigger: TATGAGGTGACGGTGCTGGTTCGAGACTCCAGCAGGCTGCCGTCAGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGATGTTCGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS GCA 90 bp | ATGACAGCTTCCTGCCCAGCCACAGTCTTGTCCACATCGGCCGCCTaGCGAACATCTCCCACCACCACATGGGCTGGCTGGGGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: MTASCPATVLSTSAA*RTSPTTTWAGWGPS Trigger: AGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGATGTTCGGCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCAGGAAGCTGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS GCA 90 bp | CCACCACCCACCCGAGGTGCAGGCCACGACCTTGTCCACTCCATGTaGCTTCATGGCTGTCACGATGTTCCGGGTGCCCTCGGACATTAC | + |
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Preference number: 5 (lower is better) Translates to: PPPTRGAGHDLVHSM*LHGCHDVPGALGHY Trigger: GTAATGTCCGAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS GCA 90 bp | GGACTGAGGTCGTTGCCAGTGCCCAGTAGCACGATGACAGCTTCCTaGCCAGCCACAGTCTTGTCCACATCGGCCGCCTGCCGAACATCT | + |
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Preference number: 5 (lower is better) Translates to: GLRSLPVPSSTMTAS*PATVLSTSAACRTS Trigger: AGATGTTCGGCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCAGGAAGCTGTCATCGTGCTACTGGGCACTGGCAACGACCTCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000133750.8 |
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| CDS GCA 90 bp | TTCCCAGTTCAGCCCCACTTCCATGACCCCACCACCCACCCGAGGTaGAGGCCACGACCTTGTCCACTCCATGTGCCTTCATGGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: FPVQPHFHDPTTHPR*RPRPCPLHVPSWLS Trigger: TGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGTGGGGTCATGGAAGTGGGGCTGAACTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS CCA 90 bp | TCCGGATGTGGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTTaGTCGGGTCCCATAGTAGGAAGGCTTGTCCACTCCATGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SGCGHRSRPAGVGAP*SGPIVGRLVHSMCL Trigger: AAGGCACATGGAGTGGACAAGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS GCA 90 bp | GTACTGAGGTCGTTGCCAGTGCCCAGTAGCACGATGACAGCTTCCTaGCCAGCCACAGTCTTGTCCACATCGGCCGCCTGCCGAACATCT | + |
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Preference number: 5 (lower is better) Translates to: VLRSLPVPSSTMTAS*PATVLSTSAACRTS Trigger: AGATGTTCGGCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCAGGAAGCTGTCATCGTGCTACTGGGCACTGGCAACGACCTCAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS GCA 90 bp | TCTTGCAGAATCTTATGCATCCGGATGTGGTCATCGGTCACGTCCTaGAGGCGTGGGGGCACCTTGGTCGGGTCCCATAGTAGGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SCRILCIRMWSSVTS*RRGGTLVGSHSRKA Trigger: GGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS GCA 90 bp | GGCATCACTGCCACGTATTTCAGCCCTGACTCTTGCAGAATCTTATaGATCCGGATGTGGTCATCGGTCACGTCCTGCAGGCGTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GITATYFSPDSCRIL*IRMWSSVTSCRRGG Trigger: GCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGCAGTGATGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS GCA 90 bp | GCACCTTGGTCGGGTCCCATAGTAGGAAGGCTTGTCCACTCCATGTaGCTTCATGGCTGTCACGATGTTCCGGGTGCCCTCGGACATTAC | + |
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Preference number: 5 (lower is better) Translates to: APWSGPIVGRLVHSM*LHGCHDVPGALGHY Trigger: GTAATGTCCGAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGCCTTCCTACTATGGGACCCGACCAAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS GCA 90 bp | TCTTGCAGAATCTTATGCATCCGGATGTGGTCATCGGTCACGTCCTaGAGGCGTGGGGGCACCTTGGTCGGGTCCCATAGTAGGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SCRILCIRMWSSVTS*RRGGTLVGSHSRKA Trigger: AGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS CCA 90 bp | ACGTATTTCAGCCCTGACTCTTGCAGAATCTTATGCATCCGGATGTaGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTTGGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: TYFSPDSCRILCIRM*SSVTSCRRGGTLVG Trigger: CCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS-3UTR CAA 90 bp | GGACTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCGTGCAGGCCACGACCTaGTCCACTCCATGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GLNIQLCVGLPSTGKTLTVQATT*STPCAF Trigger: GAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCAC...GGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS GCA 90 bp | CCTATGTGTGGGGGCATCACTGCCACGTATTTCAGCCCTGACTCTTaGAGAATCTTATGCATCCGGATGTGGTCATCGGTCACGTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PMCGGITATYFSPDS*RILCIRMWSSVTSC Trigger: GCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGCAGTGATGCCCCCACACATAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS-3UTR CAA 90 bp | CTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCAAAGTGGGACTGAGGTCGTaGCCAGTGCCCAGTAGCACG | + |
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Preference number: 5 (lower is better) Translates to: LNIQLCVGLPSTGKTLTKVGLRS*PVPSST Trigger: CGTGCTACTGGGCACTGGCAACGACCTCAGTCCCAC...TTTGGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CAA 90 bp | TGTGTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGCCCAGCCACAGTCTaGTCCACATCGGCCGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: CVITWDSFNTVFQRTGAACPATV*STSAAC Trigger: GCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCA...AGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS TCA 90 bp | TTGGTCTCCTATGTGTGGGGGCATCACTGCCACGTATTTCAGCCCTaGCTCTTGCAGAATCTTATGCATCCGGATGTGGTCATCGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LVSYVWGHHCHVFQP*LLQNLMHPDVVIGH Trigger: GTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGCAGTGATGCCCCCACACATAGGAGACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS-3UTR CAA 90 bp | GTGATAACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTCACCTCATAACCTGCTaGCACCGCCTGCGCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: VITWDSFNTVFQRTGAACHLITC*HRLRQC Trigger: ACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGGTG...ACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGTTATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR CAA 90 bp | ACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGATGCCCAGCCACAGTCTaGTCCACATCGGCCGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TKIITDRERKIRVRLPERCPATV*STSAAC Trigger: GCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCA...TCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CAA 90 bp | ACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGAAGGCGTGGGGGCACCTaGGTCGGGTCCCATAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: TKIITDRERKIRVRLPERRRGGT*VGSHSR Trigger: CCTACTATGGGACCCGACCAAGGTGCCCCCACGCCT...TCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CAA 90 bp | CTGAATATACAGCTCTGTGTGGGTTTACCAAGCACGGGTAAGACGCTGACCAAATGTCCGTCATACTCATaGGTGGTGAGGCACCGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LNIQLCVGLPSTGKTLTKCPSYS*VVRHRS Trigger: GCTACGGTGCCTCACCACCAATGAGTATGACGGACA...TTTGGTCAGCGTCTTACCCGTGCTTGGTAAACCCACACAGAGCTGTATATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS-3UTR CAA 90 bp | ACTTGGGATAGCTTTAATACCGTATTTCAGAGGACTGGGGCTGCTTGTTTAGTAGTGCAGGCCACGACCTaGTCCACTCCATGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TWDSFNTVFQRTGAACLVVQATT*STPCAF Trigger: GAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCAC...TACTAAACAAGCAGCCCCAGTCCTCTGAAATACGGTATTAAAGCTATCCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS-3UTR CAA 90 bp | ACCAAAATAATCACAGACAGAGAGAGGAAAATCAGGGTTAGGCTTCCTGAAAGACACCTCATAACCTGCTaGCACCGCCTGCGCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: TKIITDRERKIRVRLPERHLITC*HRLRQC Trigger: ACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGGTG...TCTTTCAGGAAGCCTAACCCTGATTTTCCTCTCTCTGTCTGTGATTATTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037399.16 |
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| CDS CAA 90 bp | CAGCCTGCTGGAGTCTCGAACCAGCACCGTCACCTCATAACCTGCTaGCACCGCCTGCGCCAGTGTGGTGAGCCCGGTCCTGCCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QPAGVSNQHRHLITC*HRLRQCGEPGPAGG Trigger: GCCACCGGCAGGACCGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGGTGACGGTGCTGGTTCGAGACTCCAGCAGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS TCA 72 bp | CCTCATAACCTGCTTGCACCGCCTGCGCCAGTGTGGTaGGCCCGGTCCTGCCGGTGGCACCGAAGATCGCGA | + |
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Preference number: 6 (lower is better) Translates to: PHNLLAPPAPVW*ARSCRWHRRSR Trigger: TCGCGATCTTCGGTGCCACCGGCAGGACCGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS CCA 72 bp | ACATCGGCCGCCTGCCGAACATCTCCCACCACCACATaGGCTGGCTGGGGTCCTTCTGACGGCAGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSAACRTSPTTT*AGWGPSDGSLL Trigger: CAGCAGGCTGCCGTCAGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGATGTTCGGCAGGCGGCCGATGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS CCA 72 bp | GGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTTaGTCGGGTCCCATAGTAGGAAGGCCGAGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GHRSRPAGVGAP*SGPIVGRPRCR Trigger: CCTGCACCTCGGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS CAA 90 bp | ATCCGGATGTGGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTaGGTCGGGTCCCATAGTAGGAAGGCCGAGGTGCAGGCCACGACC | + |
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Preference number: 6 (lower is better) Translates to: IRMWSSVTSCRRGGT*VGSHSRKAEVQATT Trigger: GGTCGTGGCCTGCACCTCGGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS GCA 72 bp | TCCTGCCCAGCCACAGTCTTGTCCACATCGGCCGCCTaGCGAACATCTCCCACCACCACATGGGCTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCPATVLSTSAA*RTSPTTTWAGW Trigger: CCAGCCAGCCCATGTGGTGGTGGGAGATGTTCGGCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS CAA 72 bp | TGGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTaGGTCGGGTCCCATAGTAGGAAGGCCGAGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: WSSVTSCRRGGT*VGSHSRKAEVQ Trigger: CTGCACCTCGGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS TCA 72 bp | ATCTCCCACCACCACATGGGCTGGCTGGGGTCCTTCTaGCGGCAGCCTGCTGGAGTCTCGAACCAGCACCGT | + |
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Preference number: 6 (lower is better) Translates to: ISHHHMGWLGSF*RQPAGVSNQHR Trigger: ACGGTGCTGGTTCGAGACTCCAGCAGGCTGCCGTCAGAAGGACCCCAGCCAGCCCATGTGGTGGTGGGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS GCA 72 bp | GCTGGAGTCTCGAACCAGCACCGTCACCTCATAACCTaGTTGCACCGCCTGCGCCAGTGTGGTGAGCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: AGVSNQHRHLIT*LHRLRQCGEPG Trigger: ACCGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGGTGACGGTGCTGGTTCGAGACTCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS GCA 72 bp | GGCCGAGGTGCAGGCCACGACCTTGTCCACTCCATGTaGCTTCATGGCTGTCACGATGTTCCGGGTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GRGAGHDLVHSM*LHGCHDVPGAL Trigger: GAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS GCA 72 bp | CAGCCCCACTTCCATGACCCCACCACCCACCCGAGGTaGAGGCCACGACCTTGTCCACTCCATGTGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QPHFHDPTTHPR*RPRPCPLHVPS Trigger: TGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGTGGGGTCATGGAAGTGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS CCA 72 bp | GGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTTaGTCGGGTCCCATAGTAGGAAGGCTTGTCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: GHRSRPAGVGAP*SGPIVGRLVHS Trigger: GGAGTGGACAAGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS CAA 72 bp | GGAGTCTCGAACCAGCACCGTCACCTCATAACCTGCTaGCACCGCCTGCGCCAGTGTGGTGAGCCCGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GVSNQHRHLITC*HRLRQCGEPGP Trigger: AGGACCGGGCTCACCACACTGGCGCAGGCGGTGCAAGCAGGTTATGAGGTGACGGTGCTGGTTCGAGACTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS CAA 90 bp | CCAGTGCCCAGTAGCACGATGACAGCTTCCTGCCCAGCCACAGTCTaGTCCACATCGGCCGCCTGCCGAACATCTCCCACCACCACATGG | + |
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Preference number: 6 (lower is better) Translates to: PVPSSTMTASCPATV*STSAACRTSPTTTW Trigger: CCATGTGGTGGTGGGAGATGTTCGGCAGGCGGCCGATGTGGACAAGACTGTGGCTGGGCAGGAAGCTGTCATCGTGCTACTGGGCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108358.8 ENSMUST00000133750.8 |
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| CDS GCA 72 bp | ACCCGAGGTGCAGGCCACGACCTTGTCCACTCCATGTaGCTTCATGGCTGTCACGATGTTCCGGGTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TRGAGHDLVHSM*LHGCHDVPGAL Trigger: GAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133750.8 |
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| CDS CAA 72 bp | TGGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTaGGTCGGGTCCCATAGTAGGAAGGCTTGTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: WSSVTSCRRGGT*VGSHSRKACPL Trigger: GAGTGGACAAGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS CAA 90 bp | ATCCGGATGTGGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACCTaGGTCGGGTCCCATAGTAGGAAGGCTTGTCCACTCCATGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: IRMWSSVTSCRRGGT*VGSHSRKACPLHVP Trigger: AGGCACATGGAGTGGACAAGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS GCA 72 bp | GCACCTTGGTCGGGTCCCATAGTAGGAAGGCCGAGGTaGAGGCCACGACCTTGTCCACTCCATGTGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: APWSGPIVGRPR*RPRPCPLHVPS Trigger: TGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGCCTTCCTACTATGGGACCCGACCAAGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS CAA 90 bp | TTGGTCGGGTCCCATAGTAGGAAGGCCGAGGTGCAGGCCACGACCTaGTCCACTCCATGTGCCTTCATGGCTGTCACGATGTTCCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LVGSHSRKAEVQATT*STPCAFMAVTMFRV Trigger: CACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGCCTTCCTACTATGGGACCCGACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS GCA 72 bp | ATCTTATGCATCCGGATGTGGTCATCGGTCACGTCCTaGAGGCGTGGGGGCACCTTGGTCGGGTCCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: ILCIRMWSSVTS*RRGGTLVGSHS Trigger: ACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS CCA 72 bp | AGCCCTGACTCTTGCAGAATCTTATGCATCCGGATGTaGTCATCGGTCACGTCCTGCAGGCGTGGGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SPDSCRILCIRM*SSVTSCRRGGT Trigger: GGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS GCA 72 bp | TCGGGTCCCATAGTAGGAAGGCTTGTCCACTCCATGTaGCTTCATGGCTGTCACGATGTTCCGGGTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SGPIVGRLVHSM*LHGCHDVPGAL Trigger: GAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGCCTTCCTACTATGGGACCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS CCA 72 bp | TGCAGGCCACGACCTTGTCCACTCCATGTGCCTTCATaGCTGTCACGATGTTCCGGGTGCCCTCGGACATTA | + |
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Preference number: 6 (lower is better) Translates to: CRPRPCPLHVPS*LSRCSGCPRTL Trigger: TAATGTCCGAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000133750.8 |
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| CDS CAA 72 bp | TCCCATAGTAGGAAGGCCGAGGTGCAGGCCACGACCTaGTCCACTCCATGTGCCTTCATGGCTGTCACGATG | + |
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Preference number: 6 (lower is better) Translates to: SHSRKAEVQATT*STPCAFMAVTM Trigger: CATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCACCTCGGCCTTCCTACTATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 |
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| CDS GCA 72 bp | GCCACGTATTTCAGCCCTGACTCTTGCAGAATCTTATaGATCCGGATGTGGTCATCGGTCACGTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATYFSPDSCRIL*IRMWSSVTSCR Trigger: CCTGCAGGACGTGACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS GCA 72 bp | GGGGGCATCACTGCCACGTATTTCAGCCCTGACTCTTaGAGAATCTTATGCATCCGGATGTGGTCATCGGTC | + |
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Preference number: 6 (lower is better) Translates to: GGITATYFSPDS*RILCIRMWSSV Trigger: GACCGATGACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGCAGTGATGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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| CDS CCA 72 bp | CATAGTAGGAAGGCTTGTCCACTCCATGTGCCTTCATaGCTGTCACGATGTTCCGGGTGCCCTCGGACATTA | + |
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Preference number: 6 (lower is better) Translates to: HSRKACPLHVPS*LSRCSGCPRTL Trigger: TAATGTCCGAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGCCTTCCTACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108358.8 |
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| CDS TCA 72 bp | TATGTGTGGGGGCATCACTGCCACGTATTTCAGCCCTaGCTCTTGCAGAATCTTATGCATCCGGATGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: YVWGHHCHVFQP*LLQNLMHPDVV Trigger: GACCACATCCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGCAGTGATGCCCCCACACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037399.16 ENSMUST00000108357.8 ENSMUST00000108358.8 |
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