Pregenerated sensors for BLOC1S5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038982Ensembl transcript IDs: ENSMUST00000035899.8, ENSMUST00000224115.2, ENSMUST00000224902.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTGTGCTCGCGCACGTGCATGCAGGTCAGGAGTTTTAGGAGGTaGTCCTCTCCCTCTACCATACAGTTCCTGGACACTGAACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: CVCSRTCMQVRSFRR*SSPSTIQFLDTEQR Trigger: CCTCTGTTCAGTGTCCAGGAACTGTATGGTAGAGGGAGAGGACCACCTCCTAAAACTCCTGACCTGCATGCACGTGCGCGAGCACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | CCTCTACCATACAGTTCCTGGACACTGAACAGAGGTCAACAGCCTTaGCGCCCTGCTGCTGAGCCATTTCACCGACCCATTATGGAGACT | + |
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Preference number: 1 (lower is better) Translates to: PLPYSSWTLNRGQQP*RPAAEPFHRPIMET Trigger: AGTCTCCATAATGGGTCGGTGAAATGGCTCAGCAGCAGGGCGCCAAGGCTGTTGACCTCTGTTCAGTGTCCAGGAACTGTATGGTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | AGGCAGACACCCTACACATCCAGAGCCTCCATCCATCACACCAAATaGGTAGCAACCTGGACTCTGCTCACTGGATCCCAGTCAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RQTPYTSRASIHHTK*VATWTLLTGSQSRR Trigger: TCTCCTTGACTGGGATCCAGTGAGCAGAGTCCAGGTTGCTACCCATTTGGTGTGATGGATGGAGGCTCTGGATGTGTAGGGTGTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| 3UTR CCA 90 bp | TACACATCCAGAGCCTCCATCCATCACACCAAATGGGTAGCAACCTaGACTCTGCTCACTGGATCCCAGTCAAGGAGATTGGAATGCCAT | + |
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Preference number: 1 (lower is better) Translates to: YTSRASIHHTKWVAT*TLLTGSQSRRLECH Trigger: ATGGCATTCCAATCTCCTTGACTGGGATCCAGTGAGCAGAGTCCAGGTTGCTACCCATTTGGTGTGATGGATGGAGGCTCTGGATGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| 3UTR TCA 90 bp | TTATCTGAGTTTGGTCCCCAGAGTCCACATGGCAGAGGAGAGAACTaGCTCGACTCCCACAAATTATCCTCTGATCTCCACACGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: LSEFGPQSPHGRGEN*LDSHKLSSDLHTCG Trigger: ACCACACGTGTGGAGATCAGAGGATAATTTGTGGGAGTCGAGTCAGTTCTCTCCTCTGCCATGTGGACTCTGGGGACCAAACTCAGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR TCA 90 bp | TTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGTaGAAGTTGGGTTATCTCCTTCCATCATGTGGGTCCCAGGGATTG | + |
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Preference number: 1 (lower is better) Translates to: LAHATEHMWRSEDNL*KLGYLLPSCGSQGL Trigger: CAATCCCTGGGACCCACATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | CCCCTGAGTGTACTGCTAAGCTTGAAGGAGAGACTACATGGTTGGTaGGAGGATTGGGGGAATGAGAAAGCACTTCCTCATTCATCTGTC | + |
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Preference number: 1 (lower is better) Translates to: PLSVLLSLKERLHGW*EDWGNEKALPHSSV Trigger: GACAGATGAATGAGGAAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTCAAGCTTAGCAGTACACTCAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | GTGCCCCTGAGTGTACTGCTAAGCTTGAAGGAGAGACTACATGGTTaGTGGGAGGATTGGGGGAATGAGAAAGCACTTCCTCATTCATCT | + |
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Preference number: 1 (lower is better) Translates to: VPLSVLLSLKERLHG*WEDWGNEKALPHSS Trigger: AGATGAATGAGGAAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTCAAGCTTAGCAGTACACTCAGGGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | GTTTCAAGCAGCCATGTCTCTCTGAGTGAGAATAAAAGGCAGAGATaGTATCAGTCTACTCCAGCTGCCACAGGGTGGGTGGTTCAACCA | + |
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Preference number: 1 (lower is better) Translates to: VSSSHVSLSENKRQR*YQSTPAATGWVVQP Trigger: TGGTTGAACCACCCACCCTGTGGCAGCTGGAGTAGACTGATACCATCTCTGCCTTTTATTCTCACTCAGAGAGACATGGCTGCTTGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR TCA 90 bp | CCATTCTGGCTAGAAGGGTCTGTGTTTCAAGCAGCCATGTCTCTCTaGGTGAGAATAAAAGGCAGAGATGGTATCAGTCTACTCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PFWLEGSVFQAAMSL*VRIKGRDGISLLQL Trigger: CAGCTGGAGTAGACTGATACCATCTCTGCCTTTTATTCTCACTCAGAGAGACATGGCTGCTTGAAACACAGACCCTTCTAGCCAGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR GCA 90 bp | TCCAAGCAAGCGTTCAAAGCCCACTGTGGTATCTCTGTCACAGGATaGTGTGATGGGAAGTTGTCATACCTGCCATTTAATCCACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: SKQAFKAHCGISVTG*CDGKLSYLPFNPQG Trigger: ACCTTGTGGATTAAATGGCAGGTATGACAACTTCCCATCACAGCATCCTGTGACAGAGATACCACAGTGGGCTTTGAACGCTTGCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR TCA 90 bp | GAGATAACACGACAGTTAGGGGTTCTCTGCCTTACCCTTCTTTACTaGGGAGAAGGAAATACTAGAAAGACCCACCCACACCTCAAATGC | + |
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Preference number: 1 (lower is better) Translates to: EITRQLGVLCLTLLY*GEGNTRKTHPHLKC Trigger: GCATTTGAGGTGTGGGTGGGTCTTTCTAGTATTTCCTTCTCCTCAGTAAAGAAGGGTAAGGCAGAGAACCCCTAACTGTCGTGTTATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR GCA 90 bp | GGAAGTGAGAAGTGCCTGCCACTGGAAGACACACCAACTGACCTTTaGGGAAATCTAACAGTGCTACACAAAACTGAGGACATTAACATG | + |
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Preference number: 1 (lower is better) Translates to: GSEKCLPLEDTPTDL*GNLTVLHKTEDINM Trigger: CATGTTAATGTCCTCAGTTTTGTGTAGCACTGTTAGATTTCCGCAAAGGTCAGTTGGTGTGTCTTCCAGTGGCAGGCACTTCTCACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | TTCCAAGGAAGAATCCTCACACTCTTGCATTCTTGTCAGGAACCATaGTGTCATCTGATCAAGGCATTCCCTGTGGTGGCCATGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: FQGRILTLLHSCQEP*CHLIKAFPVVAMSL Trigger: TAAAGACATGGCCACCACAGGGAATGCCTTGATCAGATGACACCATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR GCA 90 bp | GACCTTTGTCCCTGTGCTCATAGAAAAAGCAAAAACAAGCACACATaGTCTGGTGCCTGTCTCTTCCTCTTCTTATACAGGCTTTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: DLCPCAHRKSKNKHT*SGACLFLFLYRLWS Trigger: AGACCAAAGCCTGTATAAGAAGAGGAAGAGACAGGCACCAGAGCATGTGTGCTTGTTTTTGCTTTTTCTATGAGCACAGGGACAAAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | GTACTGCTAAGCTTGAAGGAGAGACTACATGGTTGGTGGGAGGATTaGGGGAATGAGAAAGCACTTCCTCATTCATCTGTCTCTTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VLLSLKERLHGWWED*GNEKALPHSSVSFR Trigger: TCTAAAAGAGACAGATGAATGAGGAAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTCAAGCTTAGCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CCA 90 bp | ATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTaGTTACAGAACCCCCTCCCCACCAGTGCTACAAGAAATGATTTA | + |
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Preference number: 1 (lower is better) Translates to: IATHFLSNFHTQKSL*LQNPLPTSATRNDL Trigger: TAAATCATTTCTTGTAGCACTGGTGGGGAGGGGGTTCTGTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR TCA 90 bp | AGTAGCCTAGGATATTTTCACCAATCACAGTTAAGCCCTAAAGATTaGAGGCATCTAGGACTAAGTAGGTATTCAGGTAAGTTACGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SSLGYFHQSQLSPKD*RHLGLSRYSGKLRR Trigger: CCTGCGTAACTTACCTGAATACCTACTTAGTCCTAGATGCCTTCAATCTTTAGGGCTTAACTGTGATTGGTGAAAATATCCTAGGCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR TCA 90 bp | AATACTTATTTCATCTCTTCTATTAGCTTTAATCCCACTTCAGCATaGGCCAAGAACGAAGCTCTCACAGTCAGCCGTACATTTACGTAC | + |
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Preference number: 1 (lower is better) Translates to: NTYFISSISFNPTSA*AKNEALTVSRTFTY Trigger: GTACGTAAATGTACGGCTGACTGTGAGAGCTTCGTTCTTGGCTCATGCTGAAGTGGGATTAAAGCTAATAGAAGAGATGAAATAAGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCAACAGCCTTGGCGCCCTGCTGCTGAGCCATTTCACCGACCCATTATGGAGTGGGCGAGCACTTTCTaGCCACCCAGAGCCCGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GQQPWRPAAEPFHRPIMEWASTF*PPRARL Trigger: AAGACGGGCTCTGGGTGGGCAGAAAGTGCTCGCCCA...CTCCATAATGGGTCGGTGAAATGGCTCAGCAGCAGGGCGCCAAGGCTGTTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCAGCTGAGTCATGCACAGACACTGTTCCGTGGAGCGCTGGCCCAGAGCGAACACTGGACATGTATCTaGCTCCGGCAGTGTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: AQLSHAQTLFRGALAQSEHWTCI*LRQCLS Trigger: AGAGAGACACTGCCGGAGCCAGATACATGTCCAGTG...TTCGCTCTGGGCCAGCGCTCCACGGAACAGTGTCTGTGCATGACTCAGCTGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGCTGAGTCATGCACAGACACTGTTCCGTGGAGCGCTGGCCCAGAGCGAACTCCTCTCCTTCAGATaGCCACAGTTAGGTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: AQLSHAQTLFRGALAQSELLSFR*PQLGAE Trigger: TTCTGCACCTAACTGTGGTCATCTGAAGGAGAGGAG...TTCGCTCTGGGCCAGCGCTCCACGGAACAGTGTCTGTGCATGACTCAGCTGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | GCACATGAACCACCCAAAGTCTTTGCTGCGTTGTGTGCCGGTGACCACAGCAGACCGGGGACCACAGGATaGTGGATGAAGCTGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: AHEPPKVFAALCAGDHSRPGTTG*WMKLSG Trigger: GCCTGACAGCTTCATCCATCATCCTGTGGTCCCCGG...TCTGCTGTGGTCACCGGCACACAACGCAGCAAAGACTTTGGGTGGTTCATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAACAGCCTTGGCGCCCTGCTGCTGAGCCATTTCACCGACCCATTATGGAGTCCCCAGAGTCCACATaGCAGAGGAGAGAACTGACT | + |
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Preference number: 2 (lower is better) Translates to: GQQPWRPAAEPFHRPIMESPEST*QRRELT Trigger: AGTCAGTTCTCTCCTCTGCCATGTGGACTCTGGGGA...CTCCATAATGGGTCGGTGAAATGGCTCAGCAGCAGGGCGCCAAGGCTGTTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGGGTTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGCCGTCTTACACGGCCTaGGAAGGACTTGGCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: VCGLAHATEHMWRSEDNLPSYTA*EGLGRL Trigger: GAGTCTGCCAAGTCCTTCCCAGGCCGTGTAAGACGG...CAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAACCCACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCTGGCTATTAGACAGCTGGGCTCTCTTCTTGTGATACCCTCATGTGACCTGCTGCCGACTCACTaGGCAGCTGAGTCATGCACA | + |
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Preference number: 2 (lower is better) Translates to: LFLAIRQLGSLLVIPSCDLLPTH*AAESCT Trigger: TGTGCATGACTCAGCTGCGCAGTGAGTCGGCAGCAG...GTCACATGAGGGTATCACAAGAAGAGAGCCCAGCTGTCTAATAGCCAGGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGGGTTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGCCATCCGGACAAGCCTaGTGGAGAAAGGATGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: VCGLAHATEHMWRSEDNLPSGQA*WRKDAK Trigger: CTTAGCATCCTTTCTCCAGCAGGCTTGTCCGGATGG...CAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAACCCACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | ACGAGGTCAGACTCTGTTCAAAAGTTCTCGGGCTTCACTGGGGGAAGACTGGCAAGAAGTGCCTGCCACTaGAAGACACACCAACTGACC | + |
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Preference number: 2 (lower is better) Translates to: TRSDSVQKFSGFTGGRLARSACH*KTHQLT Trigger: GGTCAGTTGGTGTGTCTTCCAGTGGCAGGCACTTCT...TGCCAGTCTTCCCCCAGTGAAGCCCGAGAACTTTTGAACAGAGTCTGACCTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGGGTTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGGAGAGACTACATGGTTaGTGGGAGGATTGGGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: VCGLAHATEHMWRSEDNLERLHG*WEDWGN Trigger: ATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTC...CAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAACCCACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | ACGAGGTCAGACTCTGTTCAAAAGTTCTCGGGCTTCACTGGGGGAAGACTGGCATCCGGACAAGCCTGCTaGAGAAAGGATGCTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: TRSDSVQKFSGFTGGRLASGQAC*RKDAKT Trigger: TGTCTTAGCATCCTTTCTCCAGCAGGCTTGTCCGGA...TGCCAGTCTTCCCCCAGTGAAGCCCGAGAACTTTTGAACAGAGTCTGACCTCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAACAGCCTTGGCGCCCTGCTGCTGAGCCATTTCACCGACCCATTATGGAGATGAAACAATCAGGTTaGGGCAGAGTTACCTATCAC | + |
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Preference number: 2 (lower is better) Translates to: GQQPWRPAAEPFHRPIMEMKQSG*GRVTYH Trigger: GTGATAGGTAACTCTGCCCCAACCTGATTGTTTCAT...CTCCATAATGGGTCGGTGAAATGGCTCAGCAGCAGGGCGCCAAGGCTGTTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAACAGCCTTGGCGCCCTGCTGCTGAGCCATTTCACCGACCCATTATGGAGCAACTGAAACCAAGTTaGGAGACAGCAGATTCTACA | + |
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Preference number: 2 (lower is better) Translates to: GQQPWRPAAEPFHRPIMEQLKPS*ETADST Trigger: TGTAGAATCTGCTGTCTCCCAACTTGGTTTCAGTTG...CTCCATAATGGGTCGGTGAAATGGCTCAGCAGCAGGGCGCCAAGGCTGTTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGCATTCCAAGGAAGAATCCTCACACTCTTGCATTCTTGTCAGGAACCATCCAGGAATCTTGCACTaGGCAGCCCCACTCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: TRHSKEESSHSCILVRNHPGILH*AAPLSQ Trigger: CTGTGAGAGTGGGGCTGCTCAGTGCAAGATTCCTGG...ATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAGACATGGCACTGTGTTGCACTGCAAAACCTGGTGTCTCCAAGCAAGCGGGTTGGTGGGAGGATTaGGGGAATGAGAAAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: VKDMALCCTAKPGVSKQAGWWED*GNEKAL Trigger: AAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACC...CGCTTGCTTGGAGACACCAGGTTTTGCAGTGCAACACAGTGCCATGTCTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCTGGCTATTAGACAGCTGGGCTCTCTTCTTGTGATACCCTCATGTGACGGCACTGTGTTGCACTaGAAAACCTGGTGTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LFLAIRQLGSLLVIPSCDGTVLH*KTWCLQ Trigger: TTGGAGACACCAGGTTTTGCAGTGCAACACAGTGCC...GTCACATGAGGGTATCACAAGAAGAGAGCCCAGCTGTCTAATAGCCAGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGGAGGTCAGAGGACAACCTGTGAAAGTTGGGTTATCTCCTTCCATCATTTAGGTGGTCAGGTGTaGTACACAGCACCATCACCC | + |
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Preference number: 2 (lower is better) Translates to: TCGGQRTTCESWVISFHHLGGQV*YTAPSP Trigger: GGGTGATGGTGCTGTGTACCACACCTGACCACCTAA...ATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGGAGGTCAGAGGACAACCTGTGAAAGTTGGGTTATCTCCTTCCATCATGACATGGCACTGTGTTaGACTGCAAAACCTGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: TCGGQRTTCESWVISFHHDMALC*TAKPGV Trigger: GACACCAGGTTTTGCAGTGCAACACAGTGCCATGTC...ATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCTGGCTATTAGACAGCTGGGCTCTCTTCTTGTGATACCCTCATGTGACAAAAACAAGCACACATaGTCTGGTGCCTGTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LFLAIRQLGSLLVIPSCDKNKHT*SGACLF Trigger: GAAGAGACAGGCACCAGAGCATGTGTGCTTGTTTTT...GTCACATGAGGGTATCACAAGAAGAGAGCCCAGCTGTCTAATAGCCAGGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCATTCCAAGGAAGAATCCTCACACTCTTGCATTCTTGTCAGGAACCATCAAGCACACATGCTCTaGTGCCTGTCTCTTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TRHSKEESSHSCILVRNHQAHML*CLSLPL Trigger: AAGAGGAAGAGACAGGCACCAGAGCATGTGTGCTTG...ATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCCTGGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CAA 90 bp | CAGTCATGTAATGTCTTGTCACAAAGTGAAAGACATGGCACTGTGTaGCACTGCAAAACCTGGTGTCTCCAAGCAAGCGTTCAAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QSCNVLSQSERHGTV*HCKTWCLQASVQSP Trigger: TGGGCTTTGAACGCTTGCTTGGAGACACCAGGTTTTGCAGTGCAACACAGTGCCATGTCTTTCACTTTGTGACAAGACATTACATGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCCTGGCTATTAGACAGCTGGGCTCTCTTCTTGTGATACCCTCATGTGACTTGCCCTTGGTGGAATaGATGAAGAAATCTACACTC | + |
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Preference number: 2 (lower is better) Translates to: LFLAIRQLGSLLVIPSCDLPLVE*MKKSTL Trigger: GAGTGTAGATTTCTTCATTCATTCCACCAAGGGCAA...GTCACATGAGGGTATCACAAGAAGAGAGCCCAGCTGTCTAATAGCCAGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTGCTCTATGGGCGAGATaGTGGTCCTTGGAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: NKRYQFLLICRTGRNLQPALWAR*WSLERK Trigger: TTTCCTCTCCAAGGACCATCATCTCGCCCATAGAGC...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGGAGGTCAGAGGACAACCTGTGAAAGTTGGGTTATCTCCTTCCATCATTGTGTATGGTGCACATaGACCACCCAAAGTCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: TCGGQRTTCESWVISFHHCVWCT*TTQSLC Trigger: GCAAAGACTTTGGGTGGTTCATGTGCACCATACACA...ATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGACATTCCAATCCTATATTATCTGACTGGACTTCAACTACAGGAGGGCTCAGAAGGAGAGACTACATaGTTGGTGGGAGGATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: MDIPILYYLTGLQLQEGSEGETT*LVGGLG Trigger: CCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTC...TGAGCCCTCCTGTAGTTGAAGTCCAGTCAGATAATATAGGATTGGAATGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGGAGGTCAGAGGACAACCTGTGAAAGTTGGGTTATCTCCTTCCATCATGTTCAAAGCCCACTGTaGTATCTCTGTCACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: TCGGQRTTCESWVISFHHVQSPL*YLCHRM Trigger: CATCCTGTGACAGAGATACCACAGTGGGCTTTGAAC...ATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR CAA 90 bp | AAAGCCCACTGTGGTATCTCTGTCACAGGATGCTGTGATGGGAAGTaGTCATACCTGCCATTTAATCCACAAGGTCAAACATTTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KAHCGISVTGCCDGK*SYLPFNPQGQTFAL Trigger: AAGGGCAAATGTTTGACCTTGTGGATTAAATGGCAGGTATGACAACTTCCCATCACAGCATCCTGTGACAGAGATACCACAGTGGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAGCCCACTGTGGTATCTCTGTCACAGGATGCTGTGATGGGAAGTTGTCACCTTGGTGGAATGAATaGAGAAATCTACACTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: FKAHCGISVTGCCDGKLSPWWNE*RNLHSQ Trigger: CTGTGAGTGTAGATTTCTTCATTCATTCCACCAAGG...TGACAACTTCCCATCACAGCATCCTGTGACAGAGATACCACAGTGGGCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTCTCAAGGCCCTCTCCTaGACAATCAGCAAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: NKRYQFLLICRTGRNLQPLKALS*TISKAV Trigger: AACAGCTTTGCTGATTGTGCAGGAGAGGGCCTTGAG...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTGGTTACAAGGACCAGGAATCTTaGACTGAGCAGCCCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: KLPHTSLAISIHRNLSGYKDQES*TEQPHS Trigger: AGAGTGGGGCTGCTCAGTGCAAGATTCCTGGTCCTT...GTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTGTGCATGGAAAACCATaGGGTCAGAAGTACACGAGA | + |
|
Preference number: 2 (lower is better) Translates to: NKRYQFLLICRTGRNLQPVHGKP*GQKYTR Trigger: TCTCGTGTACTTCTGACCCCATGGTTTTCCATGCAC...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTACAGCAAATGACGTTTaGTGTGGTCCTTCCTTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: NKRYQFLLICRTGRNLQPTANDV*CGPSLD Trigger: GTCTAAGGAAGGACCACATCAAACGTCATTTGCTGT...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGGCATTCCAAGGAAGAATCCTCACACTCTTGCATTCTTGTCAGGAACCATTTAGTTTACAGCAAATaGCGTTTGATGTGGTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TRHSKEESSHSCILVRNHLVYSK*RLMWSF Trigger: GAAGGACCACATCAAACGTCATTTGCTGTAAACTAA...ATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGGCATTCCAAGGAAGAATCCTCACACTCTTGCATTCTTGTCAGGAACCATTTAAGCCCTAAAGATTaGAGGCATCTAGGACTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TRHSKEESSHSCILVRNHLSPKD*RHLGLS Trigger: ACTTAGTCCTAGATGCCTTCAATCTTTAGGGCTTAA...ATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGACATTCCAATCCTATATTATCTGACTGGACTTCAACTACAGGAGGGCTCATCTCAAATGAGTGCGTaGCCTTGTTTAGTTTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: MDIPILYYLTGLQLQEGSSQMSA*PCLVYS Trigger: GCTGTAAACTAAACAAGGTCACGCACTCATTTGAGA...TGAGCCCTCCTGTAGTTGAAGTCCAGTCAGATAATATAGGATTGGAATGTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGCATTCCAAGGAAGAATCCTCACACTCTTGCATTCTTGTCAGGAACCATTACCTTCAAAACTGGTaGAAAAGAAGTGCATGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TRHSKEESSHSCILVRNHYLQNW*KRSAWK Trigger: TTTCCATGCACTTCTTTTGCACCAGTTTTGAAGGTA...ATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTACGTACATTTACACAGGCACGCATTGTCAATTGTCTGCATTGAGAATTCTGATCTCTGTCACAGGATaGTGTGATGGGAAGTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FTYIYTGTHCQLSALRILISVTG*CDGKLS Trigger: TGACAACTTCCCATCACAGCATCCTGTGACAGAGAT...CAGAATTCTCAATGCAGACAATTGACAATGCGTGCCTGTGTAAATGTACGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTGGTTACTGTCTTGTCACAAAGTaGAAGACATGGCACTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KLPHTSLAISIHRNLSGYCLVTK*KTWHCV Trigger: AACACAGTGCCATGTCTTTCACTTTGTGACAAGACA...GTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCAATTGTCTGCATTGAGAATTCTGAGATAACACGACAGTTAGGGGTTCTCCGAGATGATGGTCCTTaGAGAGGAAAAAGTCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LSIVCIENSEITRQLGVLRDDGP*RGKSQN Trigger: ATTTTGACTTTTTCCTCTCCAAGGACCATCATCTCG...GAGAACCCCTAACTGTCGTGTTATCTCAGAATTCTCAATGCAGACAATTGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTGGTTACACGAGAGGTAAAAATTaGGTGTGTACCTTCAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: KLPHTSLAISIHRNLSGYTRGKN*VCTFKT Trigger: AGTTTTGAAGGTACACACTCAATTTTTACCTCTCGT...GTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | CTGGGAAGGACTTGGCAGACTCTGCTGCCGACTCACTaGGCAGCTGAGTCATGCACAGACACTGTTCCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGRTWQTLLPTH*AAESCTDTVPW Trigger: CCACGGAACAGTGTCTGTGCATGACTCAGCTGCGCAGTGAGTCGGCAGCAGAGTCTGCCAAGTCCTTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | AGACACTGTTCCGTGGAGCGCTGGCCCAGAGCGAAATaGAGCGGAGAGCAAGGTGAGCTCTATGGGCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RHCSVERWPRAK*SGEQGELYGRD Trigger: ATCTCGCCCATAGAGCTCACCTTGCTCTCCGCTCCATTTCGCTCTGGGCCAGCGCTCCACGGAACAGTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | GTGGTCCTCTCCCTCTACCATACAGTTCCTGGACACTaGACAGAGGTCAACAGCCTTGGCGCCCTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VVLSLYHTVPGH*TEVNSLGALLL Trigger: CAGCAGCAGGGCGCCAAGGCTGTTGACCTCTGTTCAGTGTCCAGGAACTGTATGGTAGAGGGAGAGGACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | CAGCAAATGTGCCCCACCGCCCTCCTCTCCTTCAGATaGCCACAGTTAGGTGCAGAAGCACGCTTCTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QQMCPTALLSFR*PQLGAEARFFH Trigger: GTGGAAGAAGCGTGCTTCTGCACCTAACTGTGGTCATCTGAAGGAGAGGAGGGCGGTGGGGCACATTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | GGTGTCTGTGTGTGTATGTGTGTGTGCTCGCGCACGTaGATGCAGGTCAGGAGTTTTAGGAGGTGGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GVCVCMCVCSRT*MQVRSFRRWSS Trigger: AGAGGACCACCTCCTAAAACTCCTGACCTGCATGCACGTGCGCGAGCACACACACATACACACACAGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | TTAGGAGGTGGTCCTCTCCCTCTACCATACAGTTCCTaGACACTGAACAGAGGTCAACAGCCTTGGCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGGGPLPLPYSS*TLNRGQQPWRP Trigger: AGGGCGCCAAGGCTGTTGACCTCTGTTCAGTGTCCAGGAACTGTATGGTAGAGGGAGAGGACCACCTCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGGTCAGACTCTGTTCAAAAGTTCTCGGGCTTCACTGGGGGAAGACTGGCAGGAGAGACTACATGGTaGGTGGGAGGATTGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TRSDSVQKFSGFTGGRLAGETTW*VGGLGE Trigger: TTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCC...TGCCAGTCTTCCCCCAGTGAAGCCCGAGAACTTTTGAACAGAGTCTGACCTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGGGTTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGTGTGGGTCCCAGGGATaGATGTTAGGTGGTCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCGLAHATEHMWRSEDNLCGSQG*MLGGQV Trigger: CACCTGACCACCTAACATCAATCCCTGGGACCCACA...CAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAACCCACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | AGCGCTCTTTCAGTCCGGGGACCACAGGATGATGGATaGAGCTGTCAGGCTTACAGTAGCAGACAGAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: SALSVRGPQDDG*SCQAYSSRQKT Trigger: CGTTTTCTGTCTGCTACTGTAAGCCTGACAGCTTCATCCATCATCCTGTGGTCCCCGGACTGAAAGAGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | GTGGTGGTAGACAGCGGTGTTCCATCCGGACAAGCCTaGTGGAGAAAGGATGCTAAGACAAAGAGGGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: VVVDSGVPSGQA*WRKDAKTKRVY Trigger: GTAAACCCTCTTTGTCTTAGCATCCTTTCTCCAGCAGGCTTGTCCGGATGGAACACCGCTGTCTACCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | GGAGTAATGTCACTACTGACCCTCAAGGCCCTCTCCTaGACAATCAGCAAAGCTGTTACGCCAGACCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GVMSLLTLKALS*TISKAVTPDPE Trigger: TTCTGGGTCTGGCGTAACAGCTTTGCTGATTGTGCAGGAGAGGGCCTTGAGGGTCAGTAGTGACATTACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | GTGGTAGACAGCGGTGTTCCATCCGGACAAGCCTGCTaGAGAAAGGATGCTAAGACAAAGAGGGTTTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: VVDSGVPSGQAC*RKDAKTKRVYL Trigger: GAGGTAAACCCTCTTTGTCTTAGCATCCTTTCTCCAGCAGGCTTGTCCGGATGGAACACCGCTGTCTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | TGTGGGTCCCAGGGATTGATGTTAGGTGGTCAGGTGTaGTACACAGCACCATCACCCGCTAAGCCATTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CGSQGLMLGGQV*YTAPSPAKPFF Trigger: GAAAAATGGCTTAGCGGGTGATGGTGCTGTGTACCACACCTGACCACCTAACATCAATCCCTGGGACCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAACAGCCTTGGCGCCCTGCTGCTGAGCCATTTCACCGACCCATTATGGAGTTTCATGTGGTAAAATaGCCACACACTTCCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GQQPWRPAAEPFHRPIMEFHVVK*PHTSLA Trigger: TGCTAAGGAAGTGTGTGGCAATTTTACCACATGAAA...CTCCATAATGGGTCGGTGAAATGGCTCAGCAGCAGGGCGCCAAGGCTGTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | TTTGGTCCCCAGAGTCCACATGGCAGAGGAGAGAACTaGCTCGACTCCCACAAATTATCCTCTGATCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FGPQSPHGRGEN*LDSHKLSSDLH Trigger: GTGGAGATCAGAGGATAATTTGTGGGAGTCGAGTCAGTTCTCTCCTCTGCCATGTGGACTCTGGGGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | GCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGTaGAAGTTGGGTTATCTCCTTCCATCATGTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ATEHMWRSEDNL*KLGYLLPSCGS Trigger: GGACCCACATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | ATACAATGCTTGCCTAGCATAGATGAAACCCTGGGCTaGCCAGTGCCATCAAGATGGAGCATGTCACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IQCLPSIDETLG*PVPSRWSMSPA Trigger: TGCAGGTGACATGCTCCATCTTGATGGCACTGGGCAGCCCAGGGTTTCATCTATGCTAGGCAAGCATTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | GCACAATCAGCAAAGCTGTTACGCCAGACCCAGAAGTaGAGGGACGAGGTCAGACTCTGTTCAAAAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AQSAKLLRQTQK*RDEVRLCSKVL Trigger: GAGAACTTTTGAACAGAGTCTGACCTCGTCCCTCCACTTCTGGGTCTGGCGTAACAGCTTTGCTGATTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | AGCCATGTCTCTCTGAGTGAGAATAAAAGGCAGAGATaGTATCAGTCTACTCCAGCTGCCACAGGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHVSLSENKRQR*YQSTPAATGWV Trigger: CACCCACCCTGTGGCAGCTGGAGTAGACTGATACCATCTCTGCCTTTTATTCTCACTCAGAGAGACATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | TTGGGAGACAGCAGATTCTACAGGGTAACTCAGCTCTaGTATCGGAGCCACCATAAACGTGTCCCCATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGDSRFYRVTQL*YRSHHKRVPIH Trigger: ATGGATGGGGACACGTTTATGGTGGCTCCGATACCAGAGCTGAGTTACCCTGTAGAATCTGCTGTCTCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | AGCACATGTGGAGGTCAGAGGACAACCTGTGAAAGTTaGGTTATCTCCTTCCATCATGTGGGTCCCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: STCGGQRTTCES*VISFHHVGPRD Trigger: ATCCCTGGGACCCACATGATGGAAGGAGATAACCCAACTTTCACAGGTTGTCCTCTGACCTCCACATGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGGGTTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGTATGAAACAATCAGGTaGGGGCAGAGTTACCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: VCGLAHATEHMWRSEDNLYETIR*GQSYLS Trigger: TGATAGGTAACTCTGCCCCAACCTGATTGTTTCATA...CAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAACCCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | AAGTGCCTGCCACTGGAAGACACACCAACTGACCTTTaGGGAAATCTAACAGTGCTACACAAAACTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KCLPLEDTPTDL*GNLTVLHKTED Trigger: GTCCTCAGTTTTGTGTAGCACTGTTAGATTTCCGCAAAGGTCAGTTGGTGTGTCTTCCAGTGGCAGGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | GCGCCAATCAGTCAGGCAACAAGAGGTACCAGTTCTTaGTCATTTGTAGAACAGGTCGGAACTTACAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: APISQATRGTSS*SFVEQVGTYNL Trigger: CAGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTTGCCTGACTGATTGGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | AGCTTGAAGGAGAGACTACATGGTTGGTGGGAGGATTaGGGGAATGAGAAAGCACTTCCTCATTCATCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLKERLHGWWED*GNEKALPHSSV Trigger: GACAGATGAATGAGGAAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | GTACTGCTAAGCTTGAAGGAGAGACTACATGGTTGGTaGGAGGATTGGGGGAATGAGAAAGCACTTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLKERLHGW*EDWGNEKALPH Trigger: ATGAGGAAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTCAAGCTTAGCAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CCA 72 bp | AGTGTACTGCTAAGCTTGAAGGAGAGACTACATGGTTaGTGGGAGGATTGGGGGAATGAGAAAGCACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SVLLSLKERLHG*WEDWGNEKALP Trigger: AGGAAGTGCTTTCTCATTCCCCCAATCCTCCCACCAACCATGTAGTCTCTCCTTCAAGCTTAGCAGTACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | GCGTTCAAAGCCCACTGTGGTATCTCTGTCACAGGATaGTGTGATGGGAAGTTGTCATACCTGCCATTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AFKAHCGISVTG*CDGKLSYLPFN Trigger: ATTAAATGGCAGGTATGACAACTTCCCATCACAGCATCCTGTGACAGAGATACCACAGTGGGCTTTGAACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | TTGTCACAAAGTGAAAGACATGGCACTGTGTTGCACTaGAAAACCTGGTGTCTCCAAGCAAGCGTTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSQSERHGTVLH*KTWCLQASVQS Trigger: GCTTTGAACGCTTGCTTGGAGACACCAGGTTTTGCAGTGCAACACAGTGCCATGTCTTTCACTTTGTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | ATGTCTTGTCACAAAGTGAAAGACATGGCACTGTGTTaGACTGCAAAACCTGGTGTCTCCAAGCAAGCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSCHKVKDMALC*TAKPGVSKQAF Trigger: GAACGCTTGCTTGGAGACACCAGGTTTTGCAGTGCAACACAGTGCCATGTCTTTCACTTTGTGACAAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | TTCTTTCCCTTTTGCTACAAAACAATCAGGCTTTCATaGCATGGCTGTGAAAGCCAGTTGCCGGGTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FFPFCYKTIRLS*HGCESQLPGTV Trigger: CACTGTACCCGGCAACTGGCTTTCACAGCCATGGCATGAAAGCCTGATTGTTTTGTAGCAAAAGGGAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR GCA 72 bp | CTGTCACAGGATGCTGTGATGGGAAGTTGTCATACCTaGCATTTAATCCACAAGGTCAAACATTTGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSQDAVMGSCHT*HLIHKVKHLPL Trigger: CAAGGGCAAATGTTTGACCTTGTGGATTAAATGGCAGGTATGACAACTTCCCATCACAGCATCCTGTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTGGTTACACAACTGAAACCAAGTaGGGAGACAGCAGATTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KLPHTSLAISIHRNLSGYTTETK*GDSRFY Trigger: GTAGAATCTGCTGTCTCCCAACTTGGTTTCAGTTGT...GTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATGAAACAGGTGGGAAAACCGACTATATCAAACTCCAATAAATATGGACATTTACACAGGCACGCATaGTCAATTGTCTGCATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TMKQVGKPTISNSNKYGHLHRHA*SIVCIE Trigger: CTCAATGCAGACAATTGACAATGCGTGCCTGTGTAA...ATGTCCATATTTATTGGAGTTTGATATAGTCGGTTTTCCCACCTGTTTCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTTGTAACAAAAATGATTaGGAAAGGAGGGAAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NKRYQFLLICRTGRNLQPCNKND*ERREVR Trigger: TCTCACTTCCCTCCTTTCCAAATCATTTTTGTTACA...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | GTTACAGAACCCCCTCCCCACCAGTGCTACAAGAAATaGTTTAAGCTGTATTCTTTATTCATAGCCGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: VTEPPPHQCYKK*FKLYSLFIAEF Trigger: AAATTCGGCTATGAATAAAGAATACAGCTTAAATCATTTCTTGTAGCACTGGTGGGGAGGGGGTTCTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTGGTTACAATGAGTGCGTGACCTaGTTTAGTTTACAGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: KLPHTSLAISIHRNLSGYNECVT*FSLQQM Trigger: CATTTGCTGTAAACTAAACAAGGTCACGCACTCATT...GTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR TCA 72 bp | GGATATTTTCACCAATCACAGTTAAGCCCTAAAGATTaGAGGCATCTAGGACTAAGTAGGTATTCAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GYFHQSQLSPKD*RHLGLSRYSGK Trigger: CTTACCTGAATACCTACTTAGTCCTAGATGCCTTCAATCTTTAGGGCTTAACTGTGATTGGTGAAAATATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | GATCAAATCTGTCCAGCAGCAAATGTGCCCCACCGCCCTCCTCTCCTTCAGATGCGTCCACCTCAGCTCTaGGCTGCGGCTGTCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQICPAANVPHRPPLLQMRPPQL*AAAVRS Trigger: TGAGCGGACAGCCGCAGCGCAGAGCTGAGGTGGACG...CATCTGAAGGAGAGGAGGGCGGTGGGGCACATTTGCTGCTGGACAGATTTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR CCA 90 bp | GCGCAGCTGAGTCATGCACAGACACTGTTCCGTGGAGCGCTGGCCCAGAGCGAATGGTCTCTCTGCATTTaGGAAGCAGGCACTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQLSHAQTLFRGALAQSEWSLCI*EAGTHL Trigger: CAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCA...TTCGCTCTGGGCCAGCGCTCCACGGAACAGTGTCTGTGCATGACTCAGCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | ATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGGTGAGTCCCGCTTCTTaGCGCCCTGGGCGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFELLNMTGGWEMAPLVKVSPAS*RPGRRR Trigger: GCGACGCCGCCCAGGGCGGCAAGAAGCGGGACTCAC...CTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGGTCAGACTCTGTTCAAAAGTTCTCGGGCTTCACTGGGGGAAGACTGGCACCAGGCCGCACTCCATaGTCTCTCTGCATTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRSDSVQKFSGFTGGRLAPGRTP*SLCIWE Trigger: TTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGG...TGCCAGTCTTCCCCCAGTGAAGCCCGAGAACTTTTGAACAGAGTCTGACCTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | GAGAATATCAGGAACTGTTGTTTCAGCCTGTTTTGTGAGCAGATAATTGCCTTCGTGAGTCCCGCTTCTTaGCGCCCTGGGCGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ENIRNCCFSLFCEQIIAFVSPAS*RPGRRR Trigger: GCGACGCCGCCCAGGGCGGCAAGAAGCGGGACTCAC...GAAGGCAATTATCTGCTCACAAAACAGGCTGAAACAACAGTTCCTGATATTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR GCA 90 bp | AAATTGCCACACACTTCCTTAGCAATTTCCATACACAGAAATCTCTCTGGTTACGTGAGTCCCGCTTCTTaGCGCCCTGGGCGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLPHTSLAISIHRNLSGYVSPAS*RPGRRR Trigger: GCGACGCCGCCCAGGGCGGCAAGAAGCGGGACTCAC...GTAACCAGAGAGATTTCTGTGTATGGAAATTGCTAAGGAAGTGTGTGGCAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATGAAAAGATCAAATCTGTCCAGCAGCAAATGTGCCCCACCGCCCTCCTCCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: INEKIKSVQQQMCPTALLRSCSL*WSLQME Trigger: CTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACG...GAGGAGGGCGGTGGGGCACATTTGCTGCTGGACAGATTTGATCTTTTCATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR CCA 90 bp | GCACATGAACCACCCAAAGTCTTTGCTGCGTTGTGTGCCGGTGACCACAGCAGATGTGATCCAGCAGCCTaGAATGAATCTCTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHEPPKVFAALCAGDHSRCDPAA*NESLQD Trigger: ATCTTGGAGAGATTCATTCCAGGCTGCTGGATCACA...TCTGCTGTGGTCACCGGCACACAACGCAGCAAAGACTTTGGGTGGTTCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CAA 72 bp | TTGGGTTATCTCCTTCCATCATGTGGGTCCCAGGGATaGATGTTAGGTGGTCAGGTGTGGTACACAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGYLLPSCGSQG*MLGGQVWYTAP Trigger: TGGTGCTGTGTACCACACCTGACCACCTAACATCAATCCCTGGGACCCACATGATGGAAGGAGATAACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAGAATCCCAAAAGGCAGACACCCTACACATCCAGAGCCTCCATCCATCAGAGTCGTTAGCTGCTTaGAATCTCTGCAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKESQKADTLHIQSLHPSESLAA*NLCRVS Trigger: GGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTC...TGATGGATGGAGGCTCTGGATGTGTAGGGTGTCTGCCTTTTGGGATTCTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGAATCCCAAAAGGCAGACACCCTACACATCCAGAGCCTCCATCCATCATCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKESQKADTLHIQSLHPSSCSLC*SLQMES Trigger: CGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGA...TGATGGATGGAGGCTCTGGATGTGTAGGGTGTCTGCCTTTTGGGATTCTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGCCCACTGTGGTATCTCTGTCACAGGATGCTGTGATGGGAAGTTGTCAACTCCATGGTCTCTCTaGATTTGGGAAGCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FKAHCGISVTGCCDGKLSTPWSL*IWEAGT Trigger: AGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGT...TGACAACTTCCCATCACAGCATCCTGTGACAGAGATACCACAGTGGGCTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CAA 72 bp | AGGGACCAGGCATTCCAAGGAAGAATCCTCACACTCTaGCATTCTTGTCAGGAACCATGGTGTCATCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RDQAFQGRILTL*HSCQEPWCHLI Trigger: GATCAGATGACACCATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCCTGGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | TTTACGTACATTTACACAGGCACGCATTGTCAATTGTCTGCATTGAGAATTCTGTCCTTGATAATGAGGTaGGCCGCACCCGGAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTYIYTGTHCQLSALRILSLIMR*AAPGVP Trigger: GGGGACTCCGGGTGCGGCGCACCTCATTATCAAGGA...CAGAATTCTCAATGCAGACAATTGACAATGCGTGCCTGTGTAAATGTACGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGGGGAAGTTAAAGTATTTGAGGAGAATATCAGGAACTGTTGTTTCAGCTCCTTGATAATGAGGTaGGCCGCACCCGGAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPGEVKVFEENIRNCCFSSLIMR*AAPGVP Trigger: GGGGACTCCGGGTGCGGCGCACCTCATTATCAAGGA...GCTGAAACAACAGTTCCTGATATTCTCCTCAAATACTTTAACTTCCCCAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGAAACAGGTGGGAAAACCGACTATATCAAACTCCAATAAATATGGACATACCTCAGCTCTGCGCTaGGGCTGTCCGCTCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TMKQVGKPTISNSNKYGHTSALR*GCPLTN Trigger: GTTCGTGAGCGGACAGCCGCAGCGCAGAGCTGAGGT...ATGTCCATATTTATTGGAGTTTGATATAGTCGGTTTTCCCACCTGTTTCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR CCA 90 bp | TCTATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGCCAGGCCGCACTCCATaGTCTCTCTGCATTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFELLNMTGGWEMAPLVPGRTP*SLCIWE Trigger: TTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGG...CACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR GCA 90 bp | TCTATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGGAGTCGTTAGCTGCTTaGAATCTCTGCAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIFELLNMTGGWEMAPLVESLAA*NLCRVS Trigger: GGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTC...CACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR GCA 90 bp | GGAGATTGGAATGCCATGCCTTCATTCATAGCACTGTCCCGTGGAATTATTTTTCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDWNAMPSFIALSRGIIFRSCSL*WSLQME Trigger: CTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACG...AAAAATAATTCCACGGGACAGTGCTATGAATGAAGGCATGGCATTCCAATCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFELLNMTGGWEMAPLVKRSCSL*WSLQME Trigger: CTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACG...CTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTGTCCTTCTCCATTGCTaGATACTGCTCTCGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKRYQFLLICRTGRNLQPVLLHC*ILLSEP Trigger: AGGCTCCGAGAGCAGTATGCAGCAATGGAGAAGGAC...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGAATCCCAAAAGGCAGACACCCTACACATCCAGAGCCTCCATCCATCATGTGATCCAGCAGCCTaGAATGAATCTCTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKESQKADTLHIQSLHPSCDPAA*NESLQD Trigger: ATCTTGGAGAGATTCATTCCAGGCTGCTGGATCACA...TGATGGATGGAGGCTCTGGATGTGTAGGGTGTCTGCCTTTTGGGATTCTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATATCAGGAACTGTTGTTTCAGCCTGTTTTGTGAGCAGATAATTGCCTTCCCAGGCCGCACTCCATaGTCTCTCTGCATTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENIRNCCFSLFCEQIIAFPGRTP*SLCIWE Trigger: TTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGG...GAAGGCAATTATCTGCTCACAAAACAGGCTGAAACAACAGTTCCTGATATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACATTCCAATCCTATATTATCTGACTGGACTTCAACTACAGGAGGGCTCATCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MDIPILYYLTGLQLQEGSSCSLC*SLQMES Trigger: CGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGA...TGAGCCCTCCTGTAGTTGAAGTCCAGTCAGATAATATAGGATTGGAATGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGTATTCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FELLNMTGGWEMAPLVKYSCSLC*SLQMES Trigger: CGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGA...ATACTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR TCA 90 bp | ATGGACATTCCAATCCTATATTATCTGACTGGACTTCAACTACAGGAGGGCTCATCCAGCAGCCTGGAATaGATCTCTCCAAGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MDIPILYYLTGLQLQEGSSSSLE*ISPRSL Trigger: CAAGGATCTTGGAGAGATTCATTCCAGGCTGCTGGA...TGAGCCCTCCTGTAGTTGAAGTCCAGTCAGATAATATAGGATTGGAATGTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR TCA 90 bp | GGAGATTGGAATGCCATGCCTTCATTCATAGCACTGTCCCGTGGAATTATTTTTTCCAGCAGCCTGGAATaGATCTCTCCAAGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDWNAMPSFIALSRGIIFSSSLE*ISPRSL Trigger: CAAGGATCTTGGAGAGATTCATTCCAGGCTGCTGGA...AAAAATAATTCCACGGGACAGTGCTATGAATGAAGGCATGGCATTCCAATCTCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR TCA 90 bp | TCTATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGTCCAGCAGCCTGGAATaGATCTCTCCAAGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIFELLNMTGGWEMAPLVSSSLE*ISPRSL Trigger: CAAGGATCTTGGAGAGATTCATTCCAGGCTGCTGGA...CACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR GCA 90 bp | ATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGTATTAACAACTCCATGGTCTCTCTaGATTTGGGAAGCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIKHDWGLGNGSVGEVLTTPWSL*IWEAGT Trigger: AGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGT...TGTTAATACTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTTTCACCTTGGGTAACTaGTCTGTGATCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKRYQFLLICRTGRNLQPFTLGN*SVIQQP Trigger: AGGCTGCTGGATCACAGACCAGTTACCCAAGGTGAA...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CAA 72 bp | AATGTCTTGTCACAAAGTGAAAGACATGGCACTGTGTaGCACTGCAAAACCTGGTGTCTCCAAGCAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NVLSQSERHGTV*HCKTWCLQASV Trigger: AACGCTTGCTTGGAGACACCAGGTTTTGCAGTGCAACACAGTGCCATGTCTTTCACTTTGTGACAAGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| 3UTR CAA 72 bp | GGCATTCCAAGGAAGAATCCTCACACTCTTGCATTCTaGTCAGGAACCATGGTGTCATCTGATCAAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GIPRKNPHTLAF*SGTMVSSDQGI Trigger: AATGCCTTGATCAGATGACACCATGGTTCCTGACAAGAATGCAAGAGTGTGAGGATTCTTCCTTGGAATGCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | TTTACGTACATTTACACAGGCACGCATTGTCAATTGTCTGCATTGAGAATTCTGGAGTCGTTAGCTGCTTaGAATCTCTGCAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTYIYTGTHCQLSALRILESLAA*NLCRVS Trigger: GGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTC...CAGAATTCTCAATGCAGACAATTGACAATGCGTGCCTGTGTAAATGTACGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR CCA 90 bp | GGAGATTGGAATGCCATGCCTTCATTCATAGCACTGTCCCGTGGAATTATTTTTTGGTCTCTCTGCATTTaGGAAGCAGGCACTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDWNAMPSFIALSRGIIFWSLCI*EAGTHL Trigger: CAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCA...AAAAATAATTCCACGGGACAGTGCTATGAATGAAGGCATGGCATTCCAATCTCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGTATTAACATGGTCTCTCTGCATTTaGGAAGCAGGCACTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: IIKHDWGLGNGSVGEVLTWSLCI*EAGTHL Trigger: CAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCA...TGTTAATACTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGTATTAACATTCGTCAGAAACAGGTaGATCCCTGCAGCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIKHDWGLGNGSVGEVLTFVRNR*IPAAHC Trigger: ACAATGAGCTGCAGGGATCCACCTGTTTCTGACGAA...TGTTAATACTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| 3UTR CAA 72 bp | TGTGGTATCTCTGTCACAGGATGCTGTGATGGGAAGTaGTCATACCTGCCATTTAATCCACAAGGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CGISVTGCCDGK*SYLPFNPQGQT Trigger: TGTTTGACCTTGTGGATTAAATGGCAGGTATGACAACTTCCCATCACAGCATCCTGTGACAGAGATACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAAGTTAAAGTATTTGAGGAGAATATCAGGAACTGTTGTTTCAGCCTGTTTACTCCATGGTCTCTCTaGATTTGGGAAGCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GEVKVFEENIRNCCFSLFTPWSL*IWEAGT Trigger: AGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGT...AAACAGGCTGAAACAACAGTTCCTGATATTCTCCTCAAATACTTTAACTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGTATTAACATGTGATCCAGCAGCCTaGAATGAATCTCTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IIKHDWGLGNGSVGEVLTCDPAA*NESLQD Trigger: ATCTTGGAGAGATTCATTCCAGGCTGCTGGATCACA...TGTTAATACTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGTATTTGAGGAGAATATCAGGAACTGTTGTTTCAGCCTGTTTTGTGAGCTTCACCTTGGGTAACTaGTCTGTGATCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYLRRISGTVVSACFVSFTLGN*SVIQQP Trigger: AGGCTGCTGGATCACAGACCAGTTACCCAAGGTGAA...GCTCACAAAACAGGCTGAAACAACAGTTCCTGATATTCTCCTCAAATACTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
||
| CDS TCA 90 bp | TCCAAGATCCTTGATAATGAGGTGCGCCGCACCCGGAGTCCCCAGTaGGTCCCGCTTCTTGCCGCCCTGGGCGGCGTCGCACGCTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKILDNEVRRTRSPQ*VPLLAALGGVARYR Trigger: CCTGTAGCGTGCGACGCCGCCCAGGGCGGCAAGAAGCGGGACTCACTGGGGACTCCGGGTGCGGCGCACCTCATTATCAAGGATCTTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
||
| CDS GCA 90 bp | CTCTCCACGGCTCTTCTGTGCTCCTCGTCCACCTCAGCTCTGCGCTaGGGCTGTCCGCTCACGAACTCCTCCCACTGGACCAGACGACGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTALLCSSSTSALR*GCPLTNSSHWTRRR Trigger: GCGTCGTCTGGTCCAGTGGGAGGAGTTCGTGAGCGGACAGCCGCAGCGCAGAGCTGAGGTGGACGAGGAGCACAGAAGAGCCGTGGAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS GCA 90 bp | GGAGCCTCTCCACGGCTCTTCTGTGCTCCTCGTCCACCTCAGCTCTaGGCTGCGGCTGTCCGCTCACGAACTCCTCCCACTGGACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GASPRLFCAPRPPQL*AAAVRSRTPPTGPD Trigger: GTCTGGTCCAGTGGGAGGAGTTCGTGAGCGGACAGCCGCAGCGCAGAGCTGAGGTGGACGAGGAGCACAGAAGAGCCGTGGAGAGGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
||
| CDS GCA 90 bp | CTCTGCTGGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAATCTCTaGAGGGTCTCCCCCAGGCCGCACTCCATGGTCTCTCTGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCWSLQMESLAACNL*RVSPRPHSMVSLHL Trigger: CAAATGCAGAGAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 90 bp | TCCTGTTCTCTCTGCTGGAGTCTGCAGATGGAGTCGTTAGCTGCTTaGAATCTCTGCAGGGTCTCCCCCAGGCCGCACTCCATGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSLCWSLQMESLAA*NLCRVSPRPHSMVS Trigger: AGAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 90 bp | ACGAGCCCTGGGTCAAGGAGGCCCTTTTTCCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAATCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPGSRRPFFRSCSL*WSLQMESLAACNLC Trigger: GCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGCCTCCTTGACCCAGGGCTCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS CCA 90 bp | AGCCCTGGGTCAAGGAGGCCCTTTTTCCGTTCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAATCTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGSRRPFFRSCSLC*SLQMESLAACNLCR Trigger: CCTGCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGCCTCCTTGACCCAGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS GCA 90 bp | GCAATCTCTGCAGGGTCTCCCCCAGGCCGCACTCCATGGTCTCTCTaGATTTGGGAAGCAGGCACTCATTTGTTTCCTGGATCGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: AISAGSPPGRTPWSL*IWEAGTHLFPGSYS Trigger: AGAATACGATCCAGGAAACAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGAGATTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS CCA 90 bp | TCTGCAGGGTCTCCCCCAGGCCGCACTCCATGGTCTCTCTGCATTTaGGAAGCAGGCACTCATTTGTTTCCTGGATCGTATTCTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SAGSPPGRTPWSLCI*EAGTHLFPGSYSPS Trigger: ACTTGGAGAATACGATCCAGGAAACAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS CCA 90 bp | GGCCAGACATACCAAGCTCCCTTTTTCCGTTCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAATCTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQTYQAPFFRSCSLC*SLQMESLAACNLCR Trigger: CCTGCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGAGCTTGGTATGTCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS CCA 90 bp | ATCCCTGCAGCTCATTGTCAGCAATGTACCCAAATCAACGAGCCCTaGGTCAAGGAGGCCCTTTTTCCGTTCCTGTTCTCTCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IPAAHCQQCTQINEP*VKEALFPFLFSLLE Trigger: CTCCAGCAGAGAGAACAGGAACGGAAAAAGGGCCTCCTTGACCCAGGGCTCGTTGATTTGGGTACATTGCTGACAATGAGCTGCAGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS GCA 90 bp | TTCGGCCAGACATACCAAGCTCCCTTTTTCCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAATCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FGQTYQAPFFRSCSL*WSLQMESLAACNLC Trigger: GCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGAGCTTGGTATGTCTGGCCGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS CCA 90 bp | GCTGTAATTGCGGGCTGCATTGCAGGAGGGTTCGTCAGAAACAGGTaGATCCCTGCAGCTCATTGTCAGCAATGTACCCAAATCAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVIAGCIAGGFVRNR*IPAAHCQQCTQINE Trigger: CTCGTTGATTTGGGTACATTGCTGACAATGAGCTGCAGGGATCCACCTGTTTCTGACGAACCCTCCTGCAATGCAGCCCGCAATTACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGGGTTAGCACATGCTACAGAGCACATGTGGAGGTCAGAGGACAACCTGATCTCTCCAAGATCCTaGATAATGAGGTGCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCGLAHATEHMWRSEDNLISPRS*IMRCAA Trigger: TGCGGCGCACCTCATTATCAAGGATCTTGGAGAGAT...CAGGTTGTCCTCTGACCTCCACATGTGCTCTGTAGCATGTGCTAACCCACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS-3UTR CAA 90 bp | GGAGATTGGAATGCCATGCCTTCATTCATAGCACTGTCCCGTGGAATTATTTTTGTGATGTGTGCGGCATaGTTTCTGATGGGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GDWNAMPSFIALSRGIIFVMCAA*FLMGEV Trigger: CACCTCCCCCATCAGAAACAATGCCGCACACATCAC...AAAAATAATTCCACGGGACAGTGCTATGAATGAAGGCATGGCATTCCAATCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS CCA 90 bp | TCCATGGTCTCTCTGCATTTGGGAAGCAGGCACTCATTTGTTTCCTaGATCGTATTCTCCAAGTTCTTAAGAACGCGCAATTCTCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMVSLHLGSRHSFVS*IVFSKFLRTRNSRR Trigger: CCTTCGAGAATTGCGCGTTCTTAAGAACTTGGAGAATACGATCCAGGAAACAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS-3UTR CAA 90 bp | TCTATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGATCTCTCCAAGATCCTaGATAATGAGGTGCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIFELLNMTGGWEMAPLVISPRS*IMRCAA Trigger: TGCGGCGCACCTCATTATCAAGGATCTTGGAGAGAT...CACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS-3UTR CAA 90 bp | GAGAATATCAGGAACTGTTGTTTCAGCCTGTTTTGTGAGCAGATAATTGCCTTCATCTCTCCAAGATCCTaGATAATGAGGTGCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ENIRNCCFSLFCEQIIAFISPRS*IMRCAA Trigger: TGCGGCGCACCTCATTATCAAGGATCTTGGAGAGAT...GAAGGCAATTATCTGCTCACAAAACAGGCTGAAACAACAGTTCCTGATATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS-3UTR CAA 90 bp | TATTATTTGTGTATGGTGCACATGAACCACCCAAAGTCTTTGCTGCGTTGTGTGGTAACGGATTTCACCTaGGGTAACTGGTCTGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: YYLCMVHMNHPKSLLRCVVTDFT*GNWSVI Trigger: GATCACAGACCAGTTACCCAAGGTGAAATCCGTTAC...CACACAACGCAGCAAAGACTTTGGGTGGTTCATGTGCACCATACACAAATAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS-3UTR CAA 90 bp | AACAAGAGGTACCAGTTCTTGCTCATTTGTAGAACAGGTCGGAACTTACAACCTATGGTCTCTCTGCATTaGGGAAGCAGGCACTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: NKRYQFLLICRTGRNLQPMVSLH*GSRHSF Trigger: AAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCAT...AGGTTGTAAGTTCCGACCTGTTCTACAAATGAGCAAGAACTGGTACCTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS-3UTR CAA 90 bp | TTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGTATATGGTCTCTCTGCATTaGGGAAGCAGGCACTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FELLNMTGGWEMAPLVKYMVSLH*GSRHSF Trigger: AAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCAT...ATACTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS-3UTR CAA 90 bp | ATATTTGAATTATTAAACATGACTGGGGGCTGGGAAATGGCTCCGTTGGTGAAGGATCCCTGCAGCTCATaGTCAGCAATGTACCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFELLNMTGGWEMAPLVKDPCSS*SAMYPN Trigger: ATTTGGGTACATTGCTGACAATGAGCTGCAGGGATC...CTTCACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS CCA 90 bp | TTCTTCAAATTCTTTTACAAAGTAACGGATTTCACCTTGGGTAACTaGTCTGTGATCCAGCAGCCTGGAATGAATCTCTCCAAGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FFKFFYKVTDFTLGN*SVIQQPGMNLSKIL Trigger: AAGGATCTTGGAGAGATTCATTCCAGGCTGCTGGATCACAGACCAGTTACCCAAGGTGAAATCCGTTACTTTGTAAAAGAATTTGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS-3UTR CAA 90 bp | TTAAAGTATTTGAGGAGAATATCAGGAACTGTTGTTTCAGCCTGTTTTGTGAGCGTAACGGATTTCACCTaGGGTAACTGGTCTGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LKYLRRISGTVVSACFVSVTDFT*GNWSVI Trigger: GATCACAGACCAGTTACCCAAGGTGAAATCCGTTAC...GCTCACAAAACAGGCTGAAACAACAGTTCCTGATATTCTCCTCAAATACTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS-3UTR CAA 90 bp | TTAAAGTATTTGAGGAGAATATCAGGAACTGTTGTTTCAGCCTGTTTTGTGAGCATGGTCTCTCTGCATTaGGGAAGCAGGCACTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LKYLRRISGTVVSACFVSMVSLH*GSRHSF Trigger: AAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCAT...GCTCACAAAACAGGCTGAAACAACAGTTCCTGATATTCTCCTCAAATACTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS GCA 72 bp | GCGCCGCACCCGGAGTCCCCAGTGAGTCCCGCTTCTTaGCGCCCTGGGCGGCGTCGCACGCTACAGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: APHPESPVSPAS*RPGRRRTLQGS Trigger: AGACCCCTGTAGCGTGCGACGCCGCCCAGGGCGGCAAGAAGCGGGACTCACTGGGGACTCCGGGTGCGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS CAA 90 bp | ATAATGAGGTGCGCCGCACCCGGAGTCCCCAGTGAGTCCCGCTTCTaGCCGCCCTGGGCGGCGTCGCACGCTACAGGGGTCTCGGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: IMRCAAPGVPSESRF*PPWAASHATGVSVP Trigger: AGGCACCGAGACCCCTGTAGCGTGCGACGCCGCCCAGGGCGGCAAGAAGCGGGACTCACTGGGGACTCCGGGTGCGGCGCACCTCATTAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 72 bp | GCTCTTCTGTGCTCCTCGTCCACCTCAGCTCTGCGCTaGGGCTGTCCGCTCACGAACTCCTCCCACTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ALLCSSSTSALR*GCPLTNSSHWT Trigger: GGTCCAGTGGGAGGAGTTCGTGAGCGGACAGCCGCAGCGCAGAGCTGAGGTGGACGAGGAGCACAGAAGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS GCA 72 bp | CCACGGCTCTTCTGTGCTCCTCGTCCACCTCAGCTCTaGGCTGCGGCTGTCCGCTCACGAACTCCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PRLFCAPRPPQL*AAAVRSRTPPT Trigger: AGTGGGAGGAGTTCGTGAGCGGACAGCCGCAGCGCAGAGCTGAGGTGGACGAGGAGCACAGAAGAGCCGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS CAA 90 bp | TTCCTGTTCTCTCTGCTGGAGTCTGCAGATGGAGTCGTTAGCTGCTaGCAATCTCTGCAGGGTCTCCCCCAGGCCGCACTCCATGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLFSLLESADGVVSC*QSLQGLPQAALHGL Trigger: GAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 72 bp | AGTCTGCAGATGGAGTCGTTAGCTGCTTGCAATCTCTaGAGGGTCTCCCCCAGGCCGCACTCCATGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLQMESLAACNL*RVSPRPHSMVS Trigger: AGAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGAGATTGCAAGCAGCTAACGACTCCATCTGCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS CCA 72 bp | GCAATCTCTGCAGGGTCTCCCCCAGGCCGCACTCCATaGTCTCTCTGCATTTGGGAAGCAGGCACTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: AISAGSPPGRTP*SLCIWEAGTHL Trigger: CAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGGGGGAGACCCTGCAGAGATTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 72 bp | GGGTCAAGGAGGCCCTTTTTCCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAGTCGTTAGCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSRRPFFRSCSL*WSLQMESLAAC Trigger: GCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGCCTCCTTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS CCA 72 bp | GCGGGCTGCATTGCAGGAGGGTTCGTCAGAAACAGGTaGATCCCTGCAGCTCATTGTCAGCAATGTACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGCIAGGFVRNR*IPAAHCQQCTQ Trigger: TTGGGTACATTGCTGACAATGAGCTGCAGGGATCCACCTGTTTCTGACGAACCCTCCTGCAATGCAGCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS CAA 72 bp | GTCTCCCCCAGGCCGCACTCCATGGTCTCTCTGCATTaGGGAAGCAGGCACTCATTTGTTTCCTGGATCGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSPRPHSMVSLH*GSRHSFVSWIV Trigger: TACGATCCAGGAAACAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGGGGGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 72 bp | AAAGGTGGAAAACTTGGCCAGGTCCTTCTCCATTGCTaGATACTGCTCTCGGAGCCTCTCCACGGCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KGGKLGQVLLHC*ILLSEPLHGSS Trigger: AGAAGAGCCGTGGAGAGGCTCCGAGAGCAGTATGCAGCAATGGAGAAGGACCTGGCCAAGTTTTCCACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS CCA 72 bp | TCTCCCCCAGGCCGCACTCCATGGTCTCTCTGCATTTaGGAAGCAGGCACTCATTTGTTTCCTGGATCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SPPGRTPWSLCI*EAGTHLFPGSY Trigger: ATACGATCCAGGAAACAAATGAGTGCCTGCTTCCCAAATGCAGAGAGACCATGGAGTGCGGCCTGGGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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| CDS GCA 72 bp | TTAAAAGGTGGAAAACTTGGCCAGGTCCTTCTCCATTaGTGCATACTGCTCTCGGAGCCTCTCCACGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKGGKLGQVLLH*CILLSEPLHGS Trigger: AGAGCCGTGGAGAGGCTCCGAGAGCAGTATGCAGCAATGGAGAAGGACCTGGCCAAGTTTTCCACCTTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS GCA 72 bp | ACATACCAAGCTCCCTTTTTCCGTTCCTGTTCTCTCTaGTGGAGTCTGCAGATGGAGTCGTTAGCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TYQAPFFRSCSL*WSLQMESLAAC Trigger: GCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGAGCTTGGTATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224115.2 |
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| CDS CCA 72 bp | TCAAGGAGGCCCTTTTTCCGTTCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRRPFFRSCSLC*SLQMESLAACN Trigger: ATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGGCCTCCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224902.2 |
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| CDS CCA 72 bp | TCATTAATCACCTTTTTCCGTTCCTGTTCTCTCTGCTaGAGTCTGCAGATGGAGTCGTTAGCTGCTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLITFFRSCSLC*SLQMESLAACN Trigger: ATTGCAAGCAGCTAACGACTCCATCTGCAGACTCCAGCAGAGAGAACAGGAACGGAAAAAGGTGATTAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035899.8 |
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| CDS CCA 72 bp | TTCTTTTACAAAGTAACGGATTTCACCTTGGGTAACTaGTCTGTGATCCAGCAGCCTGGAATGAATCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FFYKVTDFTLGN*SVIQQPGMNLS Trigger: GGAGAGATTCATTCCAGGCTGCTGGATCACAGACCAGTTACCCAAGGTGAAATCCGTTACTTTGTAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035899.8 ENSMUST00000224115.2 ENSMUST00000224902.2 |
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