Pregenerated sensors for BLOC1S2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057506Ensembl transcript IDs: ENSMUST00000079033.6, ENSMUST00000237630.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAAAACAGGTCCCCTCACTGGACTCTACTGGCAAACCCAGGTATaGCCTGAACTCTACAGTCTCCATCTTAGATGGATGATGAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: GKTGPLTGLYWQTQV*PELYSLHLRWMMKH Trigger: ATGCTTCATCATCCATCTAAGATGGAGACTGTAGAGTTCAGGGCATACCTGGGTTTGCCAGTAGAGTCCAGTGAGGGGACCTGTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR CCA 90 bp | AAATGCCCAATACCAGGGAAAACAGGTCCCCTCACTGGACTCTACTaGCAAACCCAGGTATGCCCTGAACTCTACAGTCTCCATCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: KCPIPGKTGPLTGLY*QTQVCPELYSLHLR Trigger: TCTAAGATGGAGACTGTAGAGTTCAGGGCATACCTGGGTTTGCCAGTAGAGTCCAGTGAGGGGACCTGTTTTCCCTGGTATTGGGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCCCCTCACTGGACTCTACTGGCAAACCCAGGTATGCCCTGAACTCTACACATTCAAGTAAACGGTaGGGAGTCCCAGGTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QVPSLDSTGKPRYALNSTHSSKR*GVPGVS Trigger: ACTCACACCTGGGACTCCTCACCGTTTACTTGAATG...TGTAGAGTTCAGGGCATACCTGGGTTTGCCAGTAGAGTCCAGTGAGGGGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGCCCTGAACTCTACAGTCTCCATCTTAGATGGATGATGAAGCATTCAAGTCCAGGTGTGAGTTTCTaGGAGGTACCACCTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VCPELYSLHLRWMMKHSSPGVSF*EVPPQR Trigger: CCTCTGAGGTGGTACCTCTCAGAAACTCACACCTGG...ACTTGAATGCTTCATCATCCATCTAAGATGGAGACTGTAGAGTTCAGGGCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGAAAACAGCTCACTGGACTCTACTaGCAAACCCAGGTATGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KAAILEDDVLNAQYQGKQLTGLY*QTQVCP Trigger: AGGGCATACCTGGGTTTGCCAGTAGAGTCCAGTGAG...CTGTTTTCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCTAAATGCCCAATACCAGGGAAAACAGGTCCCCTCACTGGACTCTACTGGCCCAGTTCATCCAGTATaGCGTGGCCTTGGGCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: VLNAQYQGKQVPSLDSTGPVHPV*RGLGLN Trigger: GTTAAGCCCAAGGCCACGCAATACTGGATGAACTGG...GCCAGTAGAGTCCAGTGAGGGGACCTGTTTTCCCTGGTATTGGGCATTTAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR CCA 72 bp | ATACCAGGGAAAACAGGTCCCCTCACTGGACTCTACTaGCAAACCCAGGTATGCCCTGAACTCTACAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: IPGKTGPLTGLY*QTQVCPELYSL Trigger: GAGACTGTAGAGTTCAGGGCATACCTGGGTTTGCCAGTAGAGTCCAGTGAGGGGACCTGTTTTCCCTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR CAA 90 bp | AACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGAAAACCAGTTCATCCAGTATaGCGTGGCCTTGGGCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: NKAAILEDDVLNAQYQGKPVHPV*RGLGLN Trigger: GTTAAGCCCAAGGCCACGCAATACTGGATGAACTGG...TTTTCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR CAA 90 bp | GTATGCCCTGAACTCTACAGTCTCCATCTTAGATGGATGATGAAGCATTCAAGTCATATTAACAAACACTaGAGCCACATGAACACGATT | + |
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Preference number: 3 (lower is better) Translates to: VCPELYSLHLRWMMKHSSHINKH*SHMNTI Trigger: AATCGTGTTCATGTGGCTCAAGTGTTTGTTAATATG...ACTTGAATGCTTCATCATCCATCTAAGATGGAGACTGTAGAGTTCAGGGCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR-3UTR CAA 90 bp | AACAAACAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCATATTAACAAACACTaGAGCCACATGAACACGATT | + |
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Preference number: 3 (lower is better) Translates to: NKQNKAAILEDDVLNAQYHINKH*SHMNTI Trigger: AATCGTGTTCATGTGGCTCAAGTGTTTGTTAATATG...GTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTGTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR GCA 90 bp | GAGGTACCACCTCAGAGGAGACTCCGGAGCAGCCACGGCCCTCCAGTTCATCCAATCGAGCTTGTAGGCTaGCTGCTCCAGAGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: EVPPQRRLRSSHGPPVHPIELVG*LLQSCH Trigger: GTGGCAGCTCTGGAGCAGGCAGCCTACAAGCTCGAT...TGGATGAACTGGAGGGCCGTGGCTGCTCCGGAGTCTCCTCTGAGGTGGTACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR GCA 90 bp | GAGGTACCACCTCAGAGGAGACTCCGGAGCAGCCACGGCCCTCCAGTTCATCCATCCAGAGCTGCCACCTaGTCCTCAATCATGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: EVPPQRRLRSSHGPPVHPSRAAT*SSIMLI Trigger: GATCAACATGATTGAGGAGCAGGTGGCAGCTCTGGA...TGGATGAACTGGAGGGCCGTGGCTGCTCCGGAGTCTCCTCTGAGGTGGTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| 3UTR CAA 72 bp | CTCCGGAGCAGCCACGGCCCTCCAGTTCATCCAGTATaGCGTGGCCTTGGGCTTAACCAGCCATTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRSSHGPPVHPV*RGLGLNQPFSS Trigger: AGAAGAAAATGGCTGGTTAAGCCCAAGGCCACGCAATACTGGATGAACTGGAGGGCCGTGGCTGCTCCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR TCA 90 bp | GTGCTAAATGCCCAATACCAGGGAAAACAGGTCCCCTCACTGGACTCTACTGGCGCTCCTCAATCATGTTaGTCTGGTCCAGATATGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLNAQYQGKQVPSLDSTGAPQSC*SGPDMA Trigger: AGCCATATCTGGACCAGATCAACATGATTGAGGAGC...GCCAGTAGAGTCCAGTGAGGGGACCTGTTTTCCCTGGTATTGGGCATTTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR TCA 90 bp | AAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGAAAACAGCCCGGCAGAGCTCATTaGTGTCAGCTTCGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KAAILEDDVLNAQYQGKQPGRAH*CQLRQA Trigger: AGCCTGCCGAAGCTGACATCAATGAGCTCTGCCGGG...CTGTTTTCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS-3UTR GCA 90 bp | AACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGAAAATTCGGCAGGCTCCTTTaGTTCCTCGGCTGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NKAAILEDDVLNAQYQGKFGRLL*FLGCLH Trigger: GTGGAGACAGCCGAGGAAGCAAAGGAGCCTGCCGAA...TTTTCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS-3UTR GCA 90 bp | CAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGATGCCTGCTCCAGAGCTaGCACCTGCTCCTCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: QNKAAILEDDVLNAQYQGCLLQS*HLLLNH Trigger: ATGATTGAGGAGCAGGTGGCAGCTCTGGAGCAGGCA...TCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR GCA 90 bp | GTATGCCCTGAACTCTACAGTCTCCATCTTAGATGGATGATGAAGCATTCAAGTTGCCTGCTCCAGAGCTaGCACCTGCTCCTCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: VCPELYSLHLRWMMKHSSCLLQS*HLLLNH Trigger: ATGATTGAGGAGCAGGTGGCAGCTCTGGAGCAGGCA...ACTTGAATGCTTCATCATCCATCTAAGATGGAGACTGTAGAGTTCAGGGCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR GCA 90 bp | AACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGAAAAATCGAGCTTGTAGGCTaGCTGCTCCAGAGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NKAAILEDDVLNAQYQGKIELVG*LLQSCH Trigger: GTGGCAGCTCTGGAGCAGGCAGCCTACAAGCTCGAT...TTTTCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR GCA 90 bp | CAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGATCCAGAGCTGCCACCTaGTCCTCAATCATGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: QNKAAILEDDVLNAQYQGSRAAT*SSIMLI Trigger: GATCAACATGATTGAGGAGCAGGTGGCAGCTCTGGA...TCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR TCA 90 bp | AACAAACAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACGCTCCTCAATCATGTTaGTCTGGTCCAGATATGGCT | + |
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Preference number: 4 (lower is better) Translates to: NKQNKAAILEDDVLNAQYAPQSC*SGPDMA Trigger: AGCCATATCTGGACCAGATCAACATGATTGAGGAGC...GTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTGTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR CCA 90 bp | CAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGATCAATCATGTTGATCTaGTCCAGATATGGCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: QNKAAILEDDVLNAQYQGSIMLI*SRYGCS Trigger: ACTACAGCCATATCTGGACCAGATCAACATGATTGA...TCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR CCA 90 bp | AACAAACAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACTCAATCATGTTGATCTaGTCCAGATATGGCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: NKQNKAAILEDDVLNAQYSIMLI*SRYGCS Trigger: ACTACAGCCATATCTGGACCAGATCAACATGATTGA...GTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTGTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS GCA 90 bp | TTTGCTTCCTCGGCTGTCTCCACCGCAGCATCATCTCGAGGTGGCTaGTCCTCCCGTCGCGTCGCCGGGACGCCCTCCGCAGCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: FASSAVSTAASSRGG*SSRRVAGTPSAAAA Trigger: GGCGGCGGCTGCGGAGGGCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGATGATGCTGCGGTGGAGACAGCCGAGGAAGCAAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS CCA 90 bp | CTCCTTTGCTTCCTCGGCTGTCTCCACCGCAGCATCATCTCGAGGTaGCTGCTCCTCCCGTCGCGTCGCCGGGACGCCCTCCGCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LLCFLGCLHRSIISR*LLLPSRRRDALRSR Trigger: GCGGCTGCGGAGGGCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGATGATGCTGCGGTGGAGACAGCCGAGGAAGCAAAGGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS CCA 90 bp | ATTCATATTTTCCAGGAGTTTGTAGTCTTCACTGGTGGCTCGAGGTaGCTGCTCCTCCCGTCGCGTCGCCGGGACGCCCTCCGCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: IHIFQEFVVFTGGSR*LLLPSRRRDALRSR Trigger: GCGGCTGCGGAGGGCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGCCACCAGTGAAGACTACAAACTCCTGGAAAATATGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237630.2 |
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| CDS GCA 90 bp | CATGTCCCGGCAGAGCTCATTGATGTCAGCTTCGGCAGGCTCCTTTaGTTCCTCGGCTGTCTCCACCGCAGCATCATCTCGAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HVPAELIDVSFGRLL*FLGCLHRSIISRWL Trigger: CAGCCACCTCGAGATGATGCTGCGGTGGAGACAGCCGAGGAAGCAAAGGAGCCTGCCGAAGCTGACATCAATGAGCTCTGCCGGGACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS CCA 90 bp | TTGTTAGCTTATTCATATTTTCCAGGAGTTTGTAGTCTTCACTGGTaGCTCGAGGTGGCTGCTCCTCCCGTCGCGTCGCCGGGACGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LLAYSYFPGVCSLHW*LEVAAPPVASPGRP Trigger: AGGGCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGCCACCAGTGAAGACTACAAACTCCTGGAAAATATGAATAAGCTAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237630.2 |
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| CDS CCA 90 bp | AGCTTGTTAGCTTATTCATATTTTCCAGGAGTTTGTAGTCTTCACTaGTGGCTCGAGGTGGCTGCTCCTCCCGTCGCGTCGCCGGGACGC | + |
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Preference number: 5 (lower is better) Translates to: SLLAYSYFPGVCSLH*WLEVAAPPVASPGR Trigger: GCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGCCACCAGTGAAGACTACAAACTCCTGGAAAATATGAATAAGCTAACAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237630.2 |
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| CDS CCA 90 bp | GCTGCCTGCTCCAGAGCTGCCACCTGCTCCTCAATCATGTTGATCTaGTCCAGATATGGCTGTAGTTCAGCATATTTCTGGTTTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: AACSRAATCSSIMLI*SRYGCSSAYFWFKS Trigger: GGACTTAAACCAGAAATATGCTGAACTACAGCCATATCTGGACCAGATCAACATGATTGAGGAGCAGGTGGCAGCTCTGGAGCAGGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS-3UTR CAA 90 bp | CAAAACAAAGCAGCCATTTTAGAAGATGACGTGCTAAATGCCCAATACCAGGGACTTCGGCAGGCTCCTTaGCTTCCTCGGCTGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QNKAAILEDDVLNAQYQGLRQAP*LPRLSP Trigger: TGGAGACAGCCGAGGAAGCAAAGGAGCCTGCCGAAG...TCCCTGGTATTGGGCATTTAGCACGTCATCTTCTAAAATGGCTGCTTTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS-3UTR CAA 90 bp | GTATGCCCTGAACTCTACAGTCTCCATCTTAGATGGATGATGAAGCATTCAAGTTCCCGGCAGAGCTCATaGATGTCAGCTTCGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: VCPELYSLHLRWMMKHSSSRQSS*MSASAG Trigger: GCCTGCCGAAGCTGACATCAATGAGCTCTGCCGGGA...ACTTGAATGCTTCATCATCCATCTAAGATGGAGACTGTAGAGTTCAGGGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS CCA 72 bp | TTCCTCGGCTGTCTCCACCGCAGCATCATCTCGAGGTaGCTGCTCCTCCCGTCGCGTCGCCGGGACGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLGCLHRSIISR*LLLPSRRRDAL Trigger: GAGGGCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGATGATGCTGCGGTGGAGACAGCCGAGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079033.6 |
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| CDS CCA 72 bp | TTCCAGGAGTTTGTAGTCTTCACTGGTGGCTCGAGGTaGCTGCTCCTCCCGTCGCGTCGCCGGGACGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FQEFVVFTGGSR*LLLPSRRRDAL Trigger: GAGGGCGTCCCGGCGACGCGACGGGAGGAGCAGCCACCTCGAGCCACCAGTGAAGACTACAAACTCCTGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237630.2 |
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| CDS GCA 72 bp | ATAAGCATCGAGCTTGTAGGCTGCCTGCTCCAGAGCTaGCACCTGCTCCTCAATCATGTTGATCTGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ISIELVGCLLQS*HLLLNHVDLVQ Trigger: CTGGACCAGATCAACATGATTGAGGAGCAGGTGGCAGCTCTGGAGCAGGCAGCCTACAAGCTCGATGCTTAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS CAA 72 bp | GCCTGCTCCAGAGCTGCCACCTGCTCCTCAATCATGTaGATCTGGTCCAGATATGGCTGTAGTTCAGCATAT | + |
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Preference number: 6 (lower is better) Translates to: ACSRAATCSSIM*IWSRYGCSSAY Trigger: ATATGCTGAACTACAGCCATATCTGGACCAGATCAACATGATTGAGGAGCAGGTGGCAGCTCTGGAGCAGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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| CDS CAA 72 bp | TATTTCTGGTTTAAGTCCTTCAGGTTTCTGCTGATGTaGATAGCAATATCTTTCATTTCAAGGTACTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: YFWFKSFRFLLM*IAISFISRYFK Trigger: CTTGAAGTACCTTGAAATGAAAGATATTGCTATCAACATCAGCAGAAACCTGAAGGACTTAAACCAGAAATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079033.6 ENSMUST00000237630.2 |
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