Pregenerated sensors for BLOC1S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090247Ensembl transcript IDs: ENSMUST00000026405.10, ENSMUST00000131271.2, ENSMUST00000153731.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 72 bp | CCATTGGCTGCTATGCGGCCCAAGACACTGGTGATGTaGACCACCCGACCCCTGGCCTGCTGTAGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PLAAMRPKTLVM*TTRPLACCSRG Trigger: GCCCCTGCTACAGCAGGCCAGGGGTCGGGTGGTCAACATCACCAGTGTCTTGGGCCGCATAGCAGCCAATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR GCA 90 bp | GCCATTGGCTGCTATGCGGCCCAAGACACTGGTGATGTTGACCACCCGACCCCTATCCACTGGCCTGTCTaGTTGGCAAACTGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AIGCYAAQDTGDVDHPTPIHWPV*LANWAA Trigger: GGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGAT...AGGGGTCGGGTGGTCAACATCACCAGTGTCTTGGGCCGCATAGCAGCCAATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR CCA 90 bp | ATTGGCTGCTATGCGGCCCAAGACACTGGTGATGTTGACCACCCGACCCCTGGCACCATTCCAATCCACTaGCCTGTCTGCTTGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: IGCYAAQDTGDVDHPTPGTIPIH*PVCLAN Trigger: GTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGT...GCCAGGGGTCGGGTGGTCAACATCACCAGTGTCTTGGGCCGCATAGCAGCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGGCGCAGTGGCAATGGTaGGCATGTCCAGCTCGATGC | + |
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Preference number: 4 (lower is better) Translates to: EACVFIRGSPVSLLSRRVAQWQW*ACPARC Trigger: GCATCGAGCTGGACATGCGCACCATTGCCACTGCGC...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR GCA 90 bp | TGGAAATCATCCTGTGTTAGCCATGGTGTGGGCCCGATGATACCAGCTACGCCACTCCTCCTCTTCTCCTaGAGCTCCTTGCGTTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: WKSSCVSHGVGPMIPATPLLLFS*SSLRSF Trigger: GAACGAACGCAAGGAGCTGCAGGAGAAGAGGAGGAG...TGGCGTAGCTGGTATCATCGGGCCCACACCATGGCTAACACAGGATGATTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR GCA 90 bp | GGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGGTCAGGCAGGTCGCTaGAGCGATAGCTTCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSLCFYSWLTSFPPVQEGGQAGR*SDSFSP Trigger: AGGAGAGAAGCTATCGCTGCAGCGACCTGCCTGACC...ACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR GCA 90 bp | GGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTATCCACTGGCCTGTCTaGTTGGCAAACTGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSLCFYSWLTSFPPVQEGIHWPV*LANWAA Trigger: GGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGAT...ACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR GCA 90 bp | TGGAAATCATCCTGTGTTAGCCATGGTGTGGGCCCGATGATACCAGCTACGCCATCTCCTGCAGCTCCTTaGGTTCGTTCTGCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WKSSCVSHGVGPMIPATPSPAAP*VRSAWL Trigger: AAGCCAAGCAGAACGAACGCAAGGAGCTGCAGGAGA...TGGCGTAGCTGGTATCATCGGGCCCACACCATGGCTAACACAGGATGATTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGCTCCTCCTCTTCTCCTaGAGCTCCTTGCGTTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: EACVFIRGSPVSLLSRRVLLLFS*SSLRSF Trigger: GAACGAACGCAAGGAGCTGCAGGAGAAGAGGAGGAG...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CCA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGGTCTGCTTGGCAAACTaGGCAGCCTGGACCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: EACVFIRGSPVSLLSRRVVCLAN*AAWTCR Trigger: TCTACAGGTCCAGGCTGCCCAGTTTGCCAAGCAGAC...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CCA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGTCGTTCTGCTTGGCTTaGTGTTCTTTGAGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: EACVFIRGSPVSLLSRRVSFCLA*CSLSRR Trigger: CCGCCTGCTCAAAGAACACCAAGCCAAGCAGAACGA...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CCA 90 bp | GGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTACCATTCCAATCCACTaGCCTGTCTGCTTGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GSLCFYSWLTSFPPVQEGTIPIH*PVCLAN Trigger: GTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGT...ACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR GCA 90 bp | AGAATGGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGTCTCCTGCAGCTCCTTaGGTTCGTTCTGCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RMEACVFIRGSPVSLLSRSPAAP*VRSAWL Trigger: AAGCCAAGCAGAACGAACGCAAGGAGCTGCAGGAGA...CCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCCATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR GCA 90 bp | TCATCCTGTGTTAGCCATGGTGTGGGCCCGATGATACCAGCTACGCCAGCGTTACAAAAAGTCCTTAAGTaGCTGGTTGAAGTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSCVSHGVGPMIPATPALQKVLK*LVEVLH Trigger: GTGGAGAACTTCAACCAGGCACTTAAGGACTTTTTG...TAACGCTGGCGTAGCTGGTATCATCGGGCCCACACCATGGCTAACACAGGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTGTGTTCACACTCAGTACTCTCTGGAAATCATCCTGTGTTAGCCATGGTTCGTTCTGCTTGGCTTaGTGTTCTTTGAGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PSVFTLSTLWKSSCVSHGSFCLA*CSLSRR Trigger: CCGCCTGCTCAAAGAACACCAAGCCAAGCAGAACGA...ACCATGGCTAACACAGGATGATTTCCAGAGAGTACTGAGTGTGAACACACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR CCA 90 bp | CCGATGGGCCCCAGTGTGTTCACACTCAGTACTCTCTGGAAATCATCCTGTGTTAGAGTCTTCACCTCATaGTCCAGCTTTCTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PMGPSVFTLSTLWKSSCVRVFTS*SSFLWF Trigger: GAACCAGAGAAAGCTGGACCATGAGGTGAAGACTCT...AACACAGGATGATTTCCAGAGAGTACTGAGTGTGAACACACTGGGGCCCATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGCCCAATTTCCTTAAGTaGCTGGTTGAAGTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EACVFIRGSPVSLLSRRVPNFLK*LVEVLH Trigger: GTGGAGAACTTCAACCAGGCACTTAAGGAAATTGGG...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CCA 90 bp | AGAATGGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGAGTCTTCACCTCATaGTCCAGCTTTCTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RMEACVFIRGSPVSLLSRRVFTS*SSFLWF Trigger: GAACCAGAGAAAGCTGGACCATGAGGTGAAGACTCT...CCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCCATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CCA 90 bp | ACTCTCTGGAAATCATCCTGTGTTAGCCATGGTGTGGGCCCGATGATACCAGCTAAGTCCTTAAGTGCCTaGTTGAAGTTCTCCACCATT | + |
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Preference number: 4 (lower is better) Translates to: TLWKSSCVSHGVGPMIPAKSLSA*LKFSTI Trigger: AATGGTGGAGAACTTCAACCAGGCACTTAAGGACTT...AGCTGGTATCATCGGGCCCACACCATGGCTAACACAGGATGATTTCCAGAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGATTTCCTTAAGTGCCTaGTTGAAGTTCTCCACCATT | + |
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Preference number: 4 (lower is better) Translates to: EACVFIRGSPVSLLSRRVISLSA*LKFSTI Trigger: AATGGTGGAGAACTTCAACCAGGCACTTAAGGAAAT...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CAA 90 bp | CAGGGCAAGGGTGACACCGATGGGCCCCAGTGTGTTCACACTCAGTACTCTCTGCACTGGCCTGTCTGCTaGGCAAACTGGGCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QGKGDTDGPQCVHTQYSLHWPVC*ANWAAW Trigger: CCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTG...CAGAGAGTACTGAGTGTGAACACACTGGGGCCCATCGGTGTCACCCTTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS GCA 90 bp | ACCCACGTTGAGGTGATCCACCAACGCTTCGGTCAGGCAGGTCGCTaGAGCGATAGCTTCTCTCCTCCTCTTCTCTCTCCACCGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: THVEVIHQRFGQAGR*SDSFSPPLLSPPRF Trigger: GAACCTCGGTGGAGAGAGAAGAGGAGGAGAGAAGCTATCGCTGCAGCGACCTGCCTGACCGAAGCGTTGGTGGATCACCTCAACGTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131271.2 |
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| CDS-3UTR CAA 90 bp | CCATTGGCTGCTATGCGGCCCAAGACACTGGTGATGTTGACCACCCGACCCCTGTTGCGTTCGTTCTGCTaGGCTTGGTGTTCTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLAAMRPKTLVMLTTRPLLRSFC*AWCSLS Trigger: GCTCAAAGAACACCAAGCCAAGCAGAACGAACGCAA...CAGGGGTCGGGTGGTCAACATCACCAGTGTCTTGGGCCGCATAGCAGCCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR CAA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGCACTGGCCTGTCTGCTaGGCAAACTGGGCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EACVFIRGSPVSLLSRRVHWPVC*ANWAAW Trigger: CCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTG...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS GCA 90 bp | AGTGCCTGGTTGAAGTTCTCCACCATTCCAATCCACTGGCCTGTCTaGTTGGCAAACTGGGCAGCCTGGACCTGTAGAGTCTTCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: SAWLKFSTIPIHWPV*LANWAAWTCRVFTS Trigger: TGAGGTGAAGACTCTACAGGTCCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGTGGAGAACTTCAACCAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026405.10 ENSMUST00000131271.2 ENSMUST00000153731.8 |
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| CDS CCA 90 bp | ACCATTCCAATCCACTGGCCTGTCTGCTTGGCAAACTGGGCAGCCTaGACCTGTAGAGTCTTCACCTCATGGTCCAGCTTTCTCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: TIPIHWPVCLANWAA*TCRVFTSWSSFLWF Trigger: GAACCAGAGAAAGCTGGACCATGAGGTGAAGACTCTACAGGTCCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026405.10 ENSMUST00000131271.2 ENSMUST00000153731.8 |
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| CDS CCA 90 bp | AAGTTCTCCACCATTCCAATCCACTGGCCTGTCTGCTTGGCAAACTaGGCAGCCTGGACCTGTAGAGTCTTCACCTCATGGTCCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KFSTIPIHWPVCLAN*AAWTCRVFTSWSSF Trigger: AAAGCTGGACCATGAGGTGAAGACTCTACAGGTCCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGTGGAGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026405.10 ENSMUST00000131271.2 ENSMUST00000153731.8 |
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| CDS-3UTR CAA 90 bp | TGGAAATCATCCTGTGTTAGCCATGGTGTGGGCCCGATGATACCAGCTACGCCATTCGTTCTGCTTGGCTaGGTGTTCTTTGAGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: WKSSCVSHGVGPMIPATPFVLLG*VFFEQA Trigger: CGCCTGCTCAAAGAACACCAAGCCAAGCAGAACGAA...TGGCGTAGCTGGTATCATCGGGCCCACACCATGGCTAACACAGGATGATTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS-3UTR CAA 90 bp | GGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTTTCTCCTGCAGCTCCTaGCGTTCGTTCTGCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSLCFYSWLTSFPPVQEGFSCSS*RSFCLA Trigger: AGCCAAGCAGAACGAACGCAAGGAGCTGCAGGAGAA...ACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CAA 90 bp | GGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTTTCGTTCTGCTTGGCTaGGTGTTCTTTGAGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: GSLCFYSWLTSFPPVQEGFVLLG*VFFEQA Trigger: CGCCTGCTCAAAGAACACCAAGCCAAGCAGAACGAA...ACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CAA 90 bp | GGAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTTTGCGTTCGTTCTGCTaGGCTTGGTGTTCTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GSLCFYSWLTSFPPVQEGLRSFC*AWCSLS Trigger: GCTCAAAGAACACCAAGCCAAGCAGAACGAACGCAA...ACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CAA 90 bp | GAAGCTTGTGTTTTTATTCGTGGCTCACCAGTTTCCCTCCTGTCCAGGAGGGTGTCCTTAAGTGCCTGGTaGAAGTTCTCCACCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: EACVFIRGSPVSLLSRRVSLSAW*KFSTIP Trigger: TGGAATGGTGGAGAACTTCAACCAGGCACTTAAGGA...CACCCTCCTGGACAGGAGGGAAACTGGTGAGCCACGAATAAAAACACAAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026405.10 |
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| CDS-3UTR CAA 90 bp | GGCCCCAGTGTGTTCACACTCAGTACTCTCTGGAAATCATCCTGTGTTAGCCATTCCTTAAGTGCCTGGTaGAAGTTCTCCACCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: GPSVFTLSTLWKSSCVSHSLSAW*KFSTIP Trigger: TGGAATGGTGGAGAACTTCAACCAGGCACTTAAGGA...ATGGCTAACACAGGATGATTTCCAGAGAGTACTGAGTGTGAACACACTGGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153731.8 |
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| CDS GCA 72 bp | GAGGTGATCCACCAACGCTTCGGTCAGGCAGGTCGCTaGAGCGATAGCTTCTCTCCTCCTCTTCTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EVIHQRFGQAGR*SDSFSPPLLLQ Trigger: CTGCAGGAGAAGAGGAGGAGAGAAGCTATCGCTGCAGCGACCTGCCTGACCGAAGCGTTGGTGGATCACCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026405.10 ENSMUST00000153731.8 |
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| CDS GCA 72 bp | GAGGTGATCCACCAACGCTTCGGTCAGGCAGGTCGCTaGAGCGATAGCTTCTCTCCTCCTCTTCTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EVIHQRFGQAGR*SDSFSPPLLSP Trigger: TGGAGAGAGAAGAGGAGGAGAGAAGCTATCGCTGCAGCGACCTGCCTGACCGAAGCGTTGGTGGATCACCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131271.2 |
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| CDS CAA 90 bp | GCCTGGTTGAAGTTCTCCACCATTCCAATCCACTGGCCTGTCTGCTaGGCAAACTGGGCAGCCTGGACCTGTAGAGTCTTCACCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: AWLKFSTIPIHWPVC*ANWAAWTCRVFTSW Trigger: CCATGAGGTGAAGACTCTACAGGTCCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGTGGAGAACTTCAACCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026405.10 ENSMUST00000131271.2 ENSMUST00000153731.8 |
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| CDS CCA 72 bp | AGTTCTCCACCATTCCAATCCACTGGCCTGTCTGCTTaGCAAACTGGGCAGCCTGGACCTGTAGAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSPPFQSTGLSA*QTGQPGPVESS Trigger: TGAAGACTCTACAGGTCCAGGCTGCCCAGTTTGCCAAGCAGACAGGCCAGTGGATTGGAATGGTGGAGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026405.10 ENSMUST00000131271.2 ENSMUST00000153731.8 |
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