Pregenerated sensors for BLMH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020840Ensembl transcript IDs: ENSMUST00000021197.10, ENSMUST00000146197.3, ENSMUST00000168124.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACTCAGCCAAAGCCCCCATGGGGTCCCATGCCGGCAGGACAATaGGCTCCTGCTCTAACACAGCCAGCACCTCTTCCGGGACATGCT | + |
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Preference number: 1 (lower is better) Translates to: LTQPKPPWGPMPAGQ*APALTQPAPLPGHA Trigger: AGCATGTCCCGGAAGAGGTGCTGGCTGTGTTAGAGCAGGAGCCCATTGTCCTGCCGGCATGGGACCCCATGGGGGCTTTGGCTGAGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CCA 90 bp | AACAGCCATCCATGTAACTTTGGTTTCAGTCCCCGGGTCTGTCCTTaGCAGCTCCATCCGATCCCATGGGAGGAGGAGAGCAGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: NSHPCNFGFSPRVCP*QLHPIPWEEESRRQ Trigger: CTGCCTCCTGCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAACCAAAGTTACATGGATGGCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021197.10 ENSMUST00000168124.2 |
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| 3UTR TCA 90 bp | GCACACCACTCTGAATATCTCCTCCATCATGGCATCTTGTGTAGATaGGATCTCCCCTTTGGTGGCTCCACTGTGTACCAGGTTCCGAAG | + |
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Preference number: 1 (lower is better) Translates to: AHHSEYLLHHGILCR*DLPFGGSTVYQVPK Trigger: CTTCGGAACCTGGTACACAGTGGAGCCACCAAAGGGGAGATCTCATCTACACAAGATGCCATGATGGAGGAGATATTCAGAGTGGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR TCA 90 bp | ATCGGTCATGCACAGGTAGCCTTTGTGGCCGTGGTCTTCACCCCATaGATTCTCTACTCTCCATTTCACAAAAGTACCTTCCTGATTATC | + |
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Preference number: 1 (lower is better) Translates to: IGHAQVAFVAVVFTP*ILYSPFHKSTFLII Trigger: GATAATCAGGAAGGTACTTTTGTGAAATGGAGAGTAGAGAATTCATGGGGTGAAGACCACGGCCACAAAGGCTACCTGTGCATGACCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CCA 90 bp | GTAATTTTTATCTTTGTCTCGGTACTCCCAGGTGAAGGTCTCTGGTaGGTTGCCCAAACAGATGCACACCACTCTGAATATCTCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: VIFIFVSVLPGEGLW*VAQTDAHHSEYLLH Trigger: ATGGAGGAGATATTCAGAGTGGTGTGCATCTGTTTGGGCAACCCACCAGAGACCTTCACCTGGGAGTACCGAGACAAAGATAAAAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR TCA 90 bp | CTTACTCCGTCTTACTACAAACACAAAGACTGTGACAGAGGACAATaGCATCCAATTAAAATGCTACGAGATCCTGAGCCGTCAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: LTPSYYKHKDCDRGQ*HPIKMLRDPEPSEM Trigger: CATCTCTGACGGCTCAGGATCTCGTAGCATTTTAATTGGATGTCATTGTCCTCTGTCACAGTCTTTGTGTTTGTAGTAAGACGGAGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR GCA 90 bp | CAATGGGCTGGTTGTTATACAGCGTTTTTCTCCCTCCAACCATATTaGTCAAGTAGTCTACTGTGTACAATTTATTGTACTTGTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QWAGCYTAFFSLQPY*SSSLLCTIYCTCAG Trigger: CCCAGCACAAGTACAATAAATTGTACACAGTAGACTACTTGAGCAATATGGTTGGAGGGAGAAAAACGCTGTATAACAACCAGCCCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR TCA 90 bp | CACGCACTCACTCAGCCAAAGCCCCCATGGGGTCCCATGCCGGCAGGACAATGGGGCCCAGCTTGCCATTaGAGTGTTTTCCAACATCAC | + |
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Preference number: 2 (lower is better) Translates to: HALTQPKPPWGPMPAGQWGPACH*SVFQHH Trigger: GTGATGTTGGAAAACACTTCAATGGCAAGCTGGGCC...CCATTGTCCTGCCGGCATGGGACCCCATGGGGGCTTTGGCTGAGTGAGTGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCAGGACAATGGGCTCCTGCTCTAACACAGCCAGCACCTCTTCCGGGACAGTGAAGGTCATGGCGTaGGTCATGAGTGACTCACCA | + |
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Preference number: 2 (lower is better) Translates to: AGRTMGSCSNTASTSSGTVKVMA*VMSDSP Trigger: TGGTGAGTCACTCATGACCCACGCCATGACCTTCAC...TGTCCCGGAAGAGGTGCTGGCTGTGTTAGAGCAGGAGCCCATTGTCCTGCCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR TCA 90 bp | AGACGTACTCCGAGAACCACTCATCGGTCATGCACAGGTAGCCTTTGTGGCCGTTCTCTGAGACAGCAGTaGAGGTCATGGCGTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RRTPRTTHRSCTGSLCGRSLRQQ*RSWRGS Trigger: TGACCCACGCCATGACCTTCACTGCTGTCTCAGAGA...ACGGCCACAAAGGCTACCTGTGCATGACCGATGAGTGGTTCTCGGAGTACGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCCCAACGCACACAGACATTAAAGCACTCAGTGGGTGACCCTCGTGATTACCTCCATCCGATCCCATaGGAGGAGGAGAGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QPQRTQTLKHSVGDPRDYLHPIP*EEESRR Trigger: CCTCCTGCTCTCCTCCTCCCATGGGATCGGATGGAG...GTAATCACGAGGGTCACCCACTGAGTGCTTTAATGTCTGTGTGCGTTGGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCATCAGTTATCAGAAAGAACGAGCATCGCTGCCTCTCCCCGCCCAACCGGAAACCCAAGAGTCTaGCTGTATCCTGTGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: QHHQLSERTSIAASPRPTGNPRV*LYPVGT Trigger: TGTTCCCACAGGATACAGTCAGACTCTTGGGTTTCC...GGTTGGGCGGGGAGAGGCAGCGATGCTCGTTCTTTCTGATAACTGATGGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR-3UTR GCA 90 bp | AGACGTACTCCGAGAACCACTCATCGGTCATGCACAGGTAGCCTTTGTGGCCGTAGGTCTCTGGTGGGTTaGCCAAACAGATGCACACCA | + |
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Preference number: 2 (lower is better) Translates to: RRTPRTTHRSCTGSLCGRRSLVG*PNRCTP Trigger: TGGTGTGCATCTGTTTGGGCAACCCACCAGAGACCT...ACGGCCACAAAGGCTACCTGTGCATGACCGATGAGTGGTTCTCGGAGTACGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCTCTCTCAAAGAGGTTCCTaGAGGAGACTGGAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: SPTAQTRKRRSHLRPINLSQRGS*RRLETQ Trigger: TTGGGTTTCCAGTCTCCTCCAGGAACCTCTTTGAGA...GAGGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTGTGTAGATGAGATCTCCCCTTTGGTGGCTCCACTGTGTACCAGGTTCGGAAACCCAAGAGTCTaGCTGTATCCTGTGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: ASCVDEISPLVAPLCTRFGNPRV*LYPVGT Trigger: TGTTCCCACAGGATACAGTCAGACTCTTGGGTTTCC...GAACCTGGTACACAGTGGAGCCACCAAAGGGGAGATCTCATCTACACAAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAAATGCTACGAGATCCTGAGCCGTCAGAGATGAGGAGAGCAACGGATGCCGTTCCTGGAGGAGACTaGAAACCCAAGAGTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: IKMLRDPEPSEMRRATDAVPGGD*KPKSLT Trigger: AGTCAGACTCTTGGGTTTCCAGTCTCCTCCAGGAAC...GGCATCCGTTGCTCTCCTCATCTCTGACGGCTCAGGATCTCGTAGCATTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCATCGGTCATGCACAGGTAGCCTTTGTGGCCGTGGTCTTCACCCCATGAATACTGCAAGGGTGTTATaGGGCCAATCTTGTGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: THRSCTGSLCGRGLHPMNTARVL*GQSCGN Trigger: ATTACCACAAGATTGGCCCCATAACACCCTTGCAGT...ATTCATGGGGTGAAGACCACGGCCACAAAGGCTACCTGTGCATGACCGATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CAA 90 bp | AATATCTCCTCCATCATGGCATCTTGTGTAGATGAGATCTCCCCTTaGGTGGCTCCACTGTGTACCAGGTTCCGAAGCCGTATACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: NISSIMASCVDEISP*VAPLCTRFRSRIQN Trigger: ATTCTGTATACGGCTTCGGAACCTGGTACACAGTGGAGCCACCAAAGGGGAGATCTCATCTACACAAGATGCCATGATGGAGGAGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CAA 90 bp | TTTTTATCTTTGTCTCGGTACTCCCAGGTGAAGGTCTCTGGTGGGTaGCCCAAACAGATGCACACCACTCTGAATATCTCCTCCATCATG | + |
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Preference number: 2 (lower is better) Translates to: FLSLSRYSQVKVSGG*PKQMHTTLNISSIM Trigger: CATGATGGAGGAGATATTCAGAGTGGTGTGCATCTGTTTGGGCAACCCACCAGAGACCTTCACCTGGGAGTACCGAGACAAAGATAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATGCACACCACTCTGAATATCTCCTCCATCATGGCATCTTGTGTAGATGAGGTTCCTGGAGGAGACTaGAAACCCAAGAGTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: QMHTTLNISSIMASCVDEVPGGD*KPKSLT Trigger: AGTCAGACTCTTGGGTTTCCAGTCTCCTCCAGGAAC...CTCATCTACACAAGATGCCATGATGGAGGAGATATTCAGAGTGGTGTGCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCAGCAACCATCTTTTTCAAGAAGTCAATGGGCTGGTTGTTATACAGCGTCTTGTGCTGGGGCCGTaGGTCATTCACAAAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: GGSNHLFQEVNGLVVIQRLVLGP*VIHKTN Trigger: ATTTGTTTTGTGAATGACCCACGGCCCCAGCACAAG...ACGCTGTATAACAACCAGCCCATTGACTTCTTGAAAAAGATGGTTGCTGCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCACACAGCCTCTCCATCTTTGATGGAGGCAGCAACCATCTTTTTCAAGAATCAGGCTCCTTTTTCTaGGCTGTGTCCACAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KPHSLSIFDGGSNHLFQESGSFF*AVSTKA Trigger: TGCTTTTGTGGACACAGCTCAGAAAAAGGAGCCTGA...TTCTTGAAAAAGATGGTTGCTGCCTCCATCAAAGATGGAGAGGCTGTGTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAACCATCTTTTTCAAGAAGTCAATGGGCTGGTTGTTATACAGCGTTTTATGAGATCTCCCCTTTaGTGGCTCCACTGTGTACCA | + |
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Preference number: 2 (lower is better) Translates to: GSNHLFQEVNGLVVIQRFMRSPL*WLHCVP Trigger: TGGTACACAGTGGAGCCACCAAAGGGGAGATCTCAT...AAAACGCTGTATAACAACCAGCCCATTGACTTCTTGAAAAAGATGGTTGCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTTGAGAGTTCAAATCCTAGCTAACCCTCCCCTAATCTACTCTAGGAACAAGGACATCCAATTAAAATaGTACGAGATCCTGAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: ALRVQILANPPLIYSRNKDIQLK*YEILSR Trigger: ACGGCTCAGGATCTCGTAGCATTTTAATTGGATGTC...CTTGTTCCTAGAGTAGATTAGGGGAGGGTTAGCTAGGATTTGAACTCTCAACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR-3UTR GCA 90 bp | AAACCACACAGCCTCTCCATCTTTGATGGAGGCAGCAACCATCTTTTTCAAGAATCCCTCCAACCATATTaGTCAAGTAGTCTACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: KPHSLSIFDGGSNHLFQESLQPY*SSSLLC Trigger: ACACAGTAGACTACTTGAGCAATATGGTTGGAGGGA...TTCTTGAAAAAGATGGTTGCTGCCTCCATCAAAGATGGAGAGGCTGTGTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAATATCATTCATTCTTCTGGTAGCCTCTGTCGTATGCGATTCGGGAAATCTCAAAGAGGTTCCTaGAGGAGACTGGAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: IQNIIHSSGSLCRMRFGKSQRGS*RRLETQ Trigger: TTGGGTTTCCAGTCTCCTCCAGGAACCTCTTTGAGA...TTTCCCGAATCGCATACGACAGAGGCTACCAGAAGAATGAATGATATTCTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CCA 72 bp | CCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATaGGAGGAGGAGAGCAGGAGGCAGTCCACGCACTCA | + |
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Preference number: 3 (lower is better) Translates to: PRVCPWQLHPIP*EEESRRQSTHS Trigger: TGAGTGCGTGGACTGCCTCCTGCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CCA 72 bp | CCAAAGCCCCCATGGGGTCCCATGCCGGCAGGACAATaGGCTCCTGCTCTAACACAGCCAGCACCTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: PKPPWGPMPAGQ*APALTQPAPLP Trigger: CGGAAGAGGTGCTGGCTGTGTTAGAGCAGGAGCCCATTGTCCTGCCGGCATGGGACCCCATGGGGGCTTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR GCA 72 bp | CCTCGTAGACGTACTCCGAGAACCACTCATCGGTCATaGACAGGTAGCCTTTGTGGCCGTGGTCTTCACCCC | + |
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Preference number: 3 (lower is better) Translates to: PRRRTPRTTHRS*TGSLCGRGLHP Trigger: GGGGTGAAGACCACGGCCACAAAGGCTACCTGTGCATGACCGATGAGTGGTTCTCGGAGTACGTCTACGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CCA 72 bp | CCATGTAACTTTGGTTTCAGTCCCCGGGTCTGTCCTTaGCAGCTCCATCCGATCCCATGGGAGGAGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PCNFGFSPRVCP*QLHPIPWEEES Trigger: GCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAACCAAAGTTACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021197.10 ENSMUST00000168124.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAACTGTGTACAATTTATaGTACTTGTGCTGGGGCCGT | + |
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Preference number: 3 (lower is better) Translates to: FQSPGLSLAAPSDPMGGGTVYNL*YLCWGR Trigger: ACGGCCCCAGCACAAGTACAATAAATTGTACACAGT...TCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR GCA 72 bp | ACAGGAAACAACTCGGCAGAAGTTGAATTCAGCGACTaGCAGGTAGGAAGGACAGTGACCTGTGAGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: TGNNSAEVEFSD*QVGRTVTCEAA Trigger: TGCTGCCTCACAGGTCACTGTCCTTCCTACCTGGCAGTCGCTGAATTCAACTTCTGCCGAGTTGTTTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCCATATTGAAGAGCGGCTTCACGTGCTCCTTGTAAAACTGCAAGGGTGTAAGGTCTCTGGTGGGTaGCCCAAACAGATGCACACC | + |
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Preference number: 3 (lower is better) Translates to: IFHIEERLHVLLVKLQGCKVSGG*PKQMHT Trigger: GGTGTGCATCTGTTTGGGCAACCCACCAGAGACCTT...ACACCCTTGCAGTTTTACAAGGAGCACGTGAAGCCGCTCTTCAATATGGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR TCA 72 bp | GCACAGGTAGCCTTTGTGGCCGTGGTCTTCACCCCATaGATTCTCTACTCTCCATTTCACAAAAGTACCTTC | + |
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Preference number: 3 (lower is better) Translates to: AQVAFVAVVFTP*ILYSPFHKSTF Trigger: GAAGGTACTTTTGTGAAATGGAGAGTAGAGAATTCATGGGGTGAAGACCACGGCCACAAAGGCTACCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR GCA 72 bp | AGAATATCATTCATTCTTCTGGTAGCCTCTGTCGTATaGGATTCGGGAAAGCATTTCTTAGGAACAACACCG | + |
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Preference number: 3 (lower is better) Translates to: RISFILLVASVV*DSGKHFLGTTP Trigger: CGGTGTTGTTCCTAAGAAATGCTTTCCCGAATCGCATACGACAGAGGCTACCAGAAGAATGAATGATATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR TCA 72 bp | TCTTACTACAAACACAAAGACTGTGACAGAGGACAATaGCATCCAATTAAAATGCTACGAGATCCTGAGCCG | + |
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Preference number: 3 (lower is better) Translates to: SYYKHKDCDRGQ*HPIKMLRDPEP Trigger: CGGCTCAGGATCTCGTAGCATTTTAATTGGATGTCATTGTCCTCTGTCACAGTCTTTGTGTTTGTAGTAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| 3UTR GCA 72 bp | GGTTGTTATACAGCGTTTTTCTCCCTCCAACCATATTaGTCAAGTAGTCTACTGTGTACAATTTATTGTACT | + |
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Preference number: 3 (lower is better) Translates to: GCYTAFFSLQPY*SSSLLCTIYCT Trigger: AGTACAATAAATTGTACACAGTAGACTACTTGAGCAATATGGTTGGAGGGAGAAAAACGCTGTATAACAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| 3UTR CCA 72 bp | TACTGTGTACAATTTATTGTACTTGTGCTGGGGCCGTaGGTCATTCACAAAACAAATCTTATCTTCCATATT | + |
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Preference number: 3 (lower is better) Translates to: YCVQFIVLVLGP*VIHKTNLIFHI Trigger: AATATGGAAGATAAGATTTGTTTTGTGAATGACCCACGGCCCCAGCACAAGTACAATAAATTGTACACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| CDS-3UTR GCA 90 bp | GGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGTCCCCCATGGGGTCCCATaGCGGCAGGACAATGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GAQDCLFSVHLSCSSYSVPHGVP*RQDNGL Trigger: GAGCCCATTGTCCTGCCGGCATGGGACCCCATGGGG...GACGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR CCA 90 bp | TCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGAATGTCCAGCAGATCGTaGGTGGTCCCGACATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SVPGSVLGSSIRSHGRRRMSSRS*VVPTFW Trigger: CCAGAATGTCGGGACCACCCACGATCTGCTGGACAT...TCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021197.10 ENSMUST00000168124.2 |
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| CDS-3UTR CCA 90 bp | CCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGAGCAGGAGGTGAAGGTCATGGCGTaGGTCATGAGTGACTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PGLSLAAPSDPMGGGEQEVKVMA*VMSDSP Trigger: TGGTGAGTCACTCATGACCCACGCCATGACCTTCAC...CTCCTGCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR CCA 90 bp | AGCCCCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCTCCAGCCAAAGCCCCCATaGGGTCCCATGCCGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPTAQTRKRRSHLRPINLQPKPP*GPMPAG Trigger: TCCTGCCGGCATGGGACCCCATGGGGGCTTTGGCTG...GAGGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR TCA 90 bp | TTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGTCATGGCGTGGGTCATaGGTGACTCACCAAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSPRVCPWQLHPIPWEEESWRGS*VTHQKP Trigger: TGGCTTTTGGTGAGTCACTCATGACCCACGCCATGA...CTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR CCA 90 bp | GGAGCCCCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCGAGCACCCTGGACCGTaGCCCTCCTCAGACATATGT | + |
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Preference number: 4 (lower is better) Translates to: GAPQLRPGREGVISDRSTEHPGP*PSSDIC Trigger: ACATATGTCTGAGGAGGGCCACGGTCCAGGGTGCTC...GGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGGGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR CCA 90 bp | TTTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGGTGAAGGTCTCTGGTaGGTTGCCCAAACAGATGCA | + |
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Preference number: 4 (lower is better) Translates to: FQSPGLSLAAPSDPMGGGGEGLW*VAQTDA Trigger: TGCATCTGTTTGGGCAACCCACCAGAGACCTTCACC...TCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR TCA 90 bp | CAGCACCATCAGTTATCAGAAAGAACGAGCATCGCTGCCTCTCCCCGCCCAACCGGCGTGGGTCATGAGTaGCTCACCAAAAGCCAACCT | + |
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Preference number: 4 (lower is better) Translates to: QHHQLSERTSIAASPRPTGVGHE*LTKSQP Trigger: AGGTTGGCTTTTGGTGAGTCACTCATGACCCACGCC...GGTTGGGCGGGGAGAGGCAGCGATGCTCGTTCTTTCTGATAACTGATGGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
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| CDS-3UTR CCA 90 bp | AGACGTACTCCGAGAACCACTCATCGGTCATGCACAGGTAGCCTTTGTGGCCGTGAGCACCCTGGACCGTaGCCCTCCTCAGACATATGT | + |
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Preference number: 4 (lower is better) Translates to: RRTPRTTHRSCTGSLCGREHPGP*PSSDIC Trigger: ACATATGTCTGAGGAGGGCCACGGTCCAGGGTGCTC...ACGGCCACAAAGGCTACCTGTGCATGACCGATGAGTGGTTCTCGGAGTACGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
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| CDS-3UTR CCA 90 bp | AAGGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGCCAGCAGATCGTGGGTaGTCCCGACATTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEPRTVCSPYTSAAHLTPPADRG*SRHSGQ Trigger: TTGCCCAGAATGTCGGGACCACCCACGATCTGCTGG...CGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAACTGCAAGGGTGTTATaGGGCCAATCTTGTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FQSPGLSLAAPSDPMGGGTARVL*GQSCGN Trigger: ATTACCACAAGATTGGCCCCATAACACCCTTGCAGT...TCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGATGCCGGCAGGACAATaGGCTCCTGCTCTAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KEPRTVCSPYTSAAHLTPMPAGQ*APALTQ Trigger: CTGTGTTAGAGCAGGAGCCCATTGTCCTGCCGGCAT...CGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGAGGTCTCTGGTGGGTTaGCCAAACAGATGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: KEPRTVCSPYTSAAHLTPRSLVG*PNRCTP Trigger: TGGTGTGCATCTGTTTGGGCAACCCACCAGAGACCT...CGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | CAGCACCATCAGTTATCAGAAAGAACGAGCATCGCTGCCTCTCCCCGCCCAACCCTTGTGCTGGGGCCGTaGGTCATTCACAAAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHHQLSERTSIAASPRPTLVLGP*VIHKTN Trigger: ATTTGTTTTGTGAATGACCCACGGCCCCAGCACAAG...GGTTGGGCGGGGAGAGGCAGCGATGCTCGTTCTTTCTGATAACTGATGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| 3UTR CAA 72 bp | TCCATCATGGCATCTTGTGTAGATGAGATCTCCCCTTaGGTGGCTCCACTGTGTACCAGGTTCCGAAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SIMASCVDEISP*VAPLCTRFRSR Trigger: ACGGCTTCGGAACCTGGTACACAGTGGAGCCACCAAAGGGGAGATCTCATCTACACAAGATGCCATGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| 3UTR CAA 72 bp | TTGTCTCGGTACTCCCAGGTGAAGGTCTCTGGTGGGTaGCCCAAACAGATGCACACCACTCTGAATATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRYSQVKVSGG*PKQMHTTLNIS Trigger: GGAGATATTCAGAGTGGTGTGCATCTGTTTGGGCAACCCACCAGAGACCTTCACCTGGGAGTACCGAGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGTCTCAGGCTCCTTTTTCTaGGCTGTGTCCACAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAQDCLFSVHLSCSSYSVSGSFF*AVSTKA Trigger: TGCTTTTGTGGACACAGCTCAGAAAAAGGAGCCTGA...GACGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAGTCATCTCAGACCGATCAACCTCCCCTTTCCTGTCACAGGAAACAACTCTCTGAGACAGCAGTaGAGGTCATGGCGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRSHLRPINLPFPVTGNNSLRQQ*RSWRGS Trigger: TGACCCACGCCATGACCTTCACTGCTGTCTCAGAGA...GTTGTTTCCTGTGACAGGAAAGGGGAGGTTGATCGGTCTGAGATGACTCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | CAGCACCATCAGTTATCAGAAAGAACGAGCATCGCTGCCTCTCCCCGCCCAACCGTGGTCTTCACCCCATaGATTCTCTACTCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QHHQLSERTSIAASPRPTVVFTP*ILYSPF Trigger: AAATGGAGAGTAGAGAATTCATGGGGTGAAGACCAC...GGTTGGGCGGGGAGAGGCAGCGATGCTCGTTCTTTCTGATAACTGATGGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGTCTGGGCAAGTACGAACTaGGGGTCAGAATTTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAQDCLFSVHLSCSSYSVWASTN*GSEFSF Trigger: GAAACTAAATTCTGACCCTCAGTTCGTACTTGCCCA...GACGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | CAACCCCAACGCACACAGACATTAAAGCACTCAGTGGGTGACCCTCGTGATTACATGAGATCTCCCCTTTaGTGGCTCCACTGTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: QPQRTQTLKHSVGDPRDYMRSPL*WLHCVP Trigger: TGGTACACAGTGGAGCCACCAAAGGGGAGATCTCAT...GTAATCACGAGGGTCACCCACTGAGTGCTTTAATGTCTGTGTGCGTTGGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGTCATCTCAGACCGATCAACCTCCCCTTTCCTGTCACAGGAAACAACCCAGGTGAAGGTCTCTaGTGGGTTGCCCAAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRSHLRPINLPFPVTGNNPGEGL*WVAQTD Trigger: ATCTGTTTGGGCAACCCACCAGAGACCTTCACCTGG...GTTGTTTCCTGTGACAGGAAAGGGGAGGTTGATCGGTCTGAGATGACTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | GCGTTGAGAGTTCAAATCCTAGCTAACCCTCCCCTAATCTACTCTAGGAACAAGAGCTCTTCTGGTTGGTaGCTGGCTTGCCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALRVQILANPPLIYSRNKSSSGW*LACLPE Trigger: CTCAGGAAGGCAAGCCAGTCACCAACCAGAAGAGCT...CTTGTTCCTAGAGTAGATTAGGGGAGGGTTAGCTAGGATTTGAACTCTCAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGTCTTATCTTCCATATTaGAGAGCGGCTTCACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPRTVCSPYTSAAHLTPSYLPY*RAASRA Trigger: AGCACGTGAAGCCGCTCTTCAATATGGAAGATAAGA...CGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGATCAGAATTTAGTTTCTaGATCAAAGCAGATACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQSPGLSLAAPSDPMGGGSEFSF*IKADTF Trigger: GAAGGTATCTGCTTTGATCCAGAAACTAAATTCTGA...TCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021197.10 ENSMUST00000168124.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGCAACCATCTTTTTCAAGAAGTCAATGGGCTGGTTGTTATACAGCGTTCCAGCAGATCGTGGGTaGTCCCGACATTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EAATIFFKKSMGWLLYSVPADRG*SRHSGQ Trigger: TTGCCCAGAATGTCGGGACCACCCACGATCTGCTGG...AACGCTGTATAACAACCAGCCCATTGACTTCTTGAAAAAGATGGTTGCTGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCTCCCCTTTTTCAAGAAGTCAATaGGCTGGTTGTTATACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PQLRPGREGVISDRSTSPFSRSQ*AGCYTA Trigger: CGCTGTATAACAACCAGCCCATTGACTTCTTGAAAA...AGGGGAGGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGCAACCATCTTTTTCAAGAAGTCAATGGGCTGGTTGTTATACAGCGTTTTAGCTCTTCTGGTTGGTaGCTGGCTTGCCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSNHLFQEVNGLVVIQRFSSSGW*LACLPE Trigger: CTCAGGAAGGCAAGCCAGTCACCAACCAGAAGAGCT...AAAACGCTGTATAACAACCAGCCCATTGACTTCTTGAAAAAGATGGTTGCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS-3UTR TCA 90 bp | GCGTTGAGAGTTCAAATCCTAGCTAACCCTCCCCTAATCTACTCTAGGAACAAGGGCCCAGCTTGCCATTaGAGTGTTTTCCAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALRVQILANPPLIYSRNKGPACH*SVFQHH Trigger: GTGATGTTGGAAAACACTTCAATGGCAAGCTGGGCC...CTTGTTCCTAGAGTAGATTAGGGGAGGGTTAGCTAGGATTTGAACTCTCAACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTAATCTACTCTAGGAACAAGGAGCCCAGGACTGTTTGTTCTCCGTACTCCCTCCAACCATATTaGTCAAGTAGTCTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLIYSRNKEPRTVCSPYSLQPY*SSSLLC Trigger: ACACAGTAGACTACTTGAGCAATATGGTTGGAGGGA...GTACGGAGAACAAACAGTCCTGGGCTCCTTGTTCCTAGAGTAGATTAGGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | GCGTTGAGAGTTCAAATCCTAGCTAACCCTCCCCTAATCTACTCTAGGAACAAGTTATTGTACTTGTGCTaGGGCCGTGGGTCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALRVQILANPPLIYSRNKLLYLC*GRGSFT Trigger: TGTGAATGACCCACGGCCCCAGCACAAGTACAATAA...CTTGTTCCTAGAGTAGATTAGGGGAGGGTTAGCTAGGATTTGAACTCTCAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | TTACTCCGTCTTACTACAAACACAAAGACTGTGACAGAGGACAATGACATCCAAAGATCTCCCCTTTGGTaGCTCCACTGTGTACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLTTNTKTVTEDNDIQRSPLW*LHCVPG Trigger: ACCTGGTACACAGTGGAGCCACCAAAGGGGAGATCT...TTGGATGTCATTGTCCTCTGTCACAGTCTTTGTGTTTGTAGTAAGACGGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR TCA 90 bp | GTGTACAATTTATTGTACTTGTGCTGGGGCCGTGGGTCATTCACAAAACAAATCTGGGCAAGTACGAACTaGGGGTCAGAATTTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYNLLYLCWGRGSFTKQIWASTN*GSEFSF Trigger: GAAACTAAATTCTGACCCTCAGTTCGTACTTGCCCA...GATTTGTTTTGTGAATGACCCACGGCCCCAGCACAAGTACAATAAATTGTACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS-3UTR GCA 90 bp | GCGTTGAGAGTTCAAATCCTAGCTAACCCTCCCCTAATCTACTCTAGGAACAAGTTCATAAGCAAATACTaGACCAGTCTCCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALRVQILANPPLIYSRNKFISKY*TSLPSS Trigger: TGAAGATGGGAGACTGGTGCAGTATTTGCTTATGAA...CTTGTTCCTAGAGTAGATTAGGGGAGGGTTAGCTAGGATTTGAACTCTCAACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CCA 90 bp | GCTAACCCTCCCCTAATCTACTCTAGGAACAAGGAGCCCAGGACTGTTTGTTCTTCAGAATTTAGTTTCTaGATCAAAGCAGATACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ANPPLIYSRNKEPRTVCSSEFSF*IKADTF Trigger: GAAGGTATCTGCTTTGATCCAGAAACTAAATTCTGA...AGAACAAACAGTCCTGGGCTCCTTGTTCCTAGAGTAGATTAGGGGAGGGTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| 3UTR CAA 72 bp | GCAGCAACCATCTTTTTCAAGAAGTCAATGGGCTGGTaGTTATACAGCGTTTTTCTCCCTCCAACCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: AATIFFKKSMGW*LYSVFLPPTIL Trigger: CAATATGGTTGGAGGGAGAAAAACGCTGTATAACAACCAGCCCATTGACTTCTTGAAAAAGATGGTTGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGAGCAGGAAAGGTCTCTGGTGGGTaGCCCAAACAGATGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: PGSVLGSSIRSHGRRRAGKVSGG*PKQMHT Trigger: GGTGTGCATCTGTTTGGGCAACCCACCAGAGACCTT...TCCTGCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | CACGCACTCACTCAGCCAAAGCCCCCATGGGGTCCCATGCCGGCAGGACAATGGCTGAGGCACAACGTGTaGAAACACATGCTGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HALTQPKPPWGPMPAGQWLRHNV*KHMLST Trigger: GGTGCTCAGCATGTGTTTCAACACGTTGTGCCTCAG...CCATTGTCCTGCCGGCATGGGACCCCATGGGGGCTTTGGCTGAGTGAGTGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS CCA 90 bp | CCTGAGGCACAACGTGTTGAAACACATGCTGAGCACCCTGGACCGTaGCCCTCCTCAGACATATGTCCAGCAGATCGTGGGTGGTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PEAQRVETHAEHPGP*PSSDICPADRGWSR Trigger: TCGGGACCACCCACGATCTGCTGGACATATGTCTGAGGAGGGCCACGGTCCAGGGTGCTCAGCATGTGTTTCAACACGTTGTGCCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGAGAACCACTCATCGGTCATGCACAGGTAGCCTTTGTGGCCGTGGTCTTCCCAGAGCTCTTCTGGTaGGTGACTGGCTTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LREPLIGHAQVAFVAVVFPELFW*VTGLPS Trigger: GGAAGGCAAGCCAGTCACCAACCAGAAGAGCTCTGG...GAAGACCACGGCCACAAAGGCTACCTGTGCATGACCGATGAGTGGTTCTCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168124.2 |
||
| CDS-3UTR CAA 90 bp | CCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGAGCAGGAGTACAATTTATTGTACTaGTGCTGGGGCCGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLSLAAPSDPMGGGEQEYNLLY*CWGRGS Trigger: TGACCCACGGCCCCAGCACAAGTACAATAAATTGTA...CTCCTGCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | CCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAGAGCAGGAGACTGTGTACAATTTATaGTACTTGTGCTGGGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGLSLAAPSDPMGGGEQETVYNL*YLCWGR Trigger: ACGGCCCCAGCACAAGTACAATAAATTGTACACAGT...CTCCTGCTCTCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | TTTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGATCACTGAGGCCCAGCTaGCCATTGAAGTGTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FQSPGLSLAAPSDPMGGGSLRPS*PLKCFP Trigger: TGGAAAACACTTCAATGGCAAGCTGGGCCTCAGTGA...TCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS CCA 90 bp | CCTGGACCGTGGCCCTCCTCAGACATATGTCCAGCAGATCGTGGGTaGTCCCGACATTCTGGGCAAGTACGAACTGAGGGTCAGAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGPWPSSDICPADRG*SRHSGQVRTEGQNL Trigger: TAAATTCTGACCCTCAGTTCGTACTTGCCCAGAATGTCGGGACCACCCACGATCTGCTGGACATATGTCTGAGGAGGGCCACGGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCTCGATGAGATCTCCCCTTaGGTGGCTCCACTGTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SPTAQTRKRRSHLRPINLDEISP*VAPLCT Trigger: GGTACACAGTGGAGCCACCAAAGGGGAGATCTCATC...GAGGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | TTTCAGTCCCCGGGTCTGTCCTTGGCAGCTCCATCCGATCCCATGGGAGGAGGAATCTTATCTTCCATATaGAAGAGCGGCTTCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQSPGLSLAAPSDPMGGGILSSI*KSGFTC Trigger: GCACGTGAAGCCGCTCTTCAATATGGAAGATAAGAT...TCCTCCTCCCATGGGATCGGATGGAGCTGCCAAGGACAGACCCGGGGACTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | AAGGAGCCCAGGACTGTTTGTTCTCCGTACACCTCAGCTGCTCATCTTACTCCGCTGAGGCACAACGTGTaGAAACACATGCTGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KEPRTVCSPYTSAAHLTPLRHNV*KHMLST Trigger: GGTGCTCAGCATGTGTTTCAACACGTTGTGCCTCAG...CGGAGTAAGATGAGCAGCTGAGGTGTACGGAGAACAAACAGTCCTGGGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | ATTAAAATGCTACGAGATCCTGAGCCGTCAGAGATGAGGAGAGCAACGGATGCCCCAGAGCTCTTCTGGTaGGTGACTGGCTTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKMLRDPEPSEMRRATDAPELFW*VTGLPS Trigger: GGAAGGCAAGCCAGTCACCAACCAGAAGAGCTCTGG...GGCATCCGTTGCTCTCCTCATCTCTGACGGCTCAGGATCTCGTAGCATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCAGGCCCAGCTTGCCATaGAAGTGTTTTCCAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: GAPQLRPGREGVISDRSTRPSLP*KCFPTS Trigger: TGATGTTGGAAAACACTTCAATGGCAAGCTGGGCCT...GGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGGGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAGTCATCTCAGACCGATCAACCTCCCCTTTCCTGTCACAGGAAACAACACAGCCTCTCCATCTTaGATGGAGGCAGCAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: RRSHLRPINLPFPVTGNNTASPS*MEAATI Trigger: GATGGTTGCTGCCTCCATCAAAGATGGAGAGGCTGT...GTTGTTTCCTGTGACAGGAAAGGGGAGGTTGATCGGTCTGAGATGACTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS TCA 90 bp | TCCAGCAGATCGTGGGTGGTCCCGACATTCTGGGCAAGTACGAACTaGGGGTCAGAATTTAGTTTCTGGATCAAAGCAGATACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSWVVPTFWASTN*GSEFSFWIKADTFS Trigger: GGAGAAGGTATCTGCTTTGATCCAGAAACTAAATTCTGACCCTCAGTTCGTACTTGCCCAGAATGTCGGGACCACCCACGATCTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGCTCAGACCAGGAAGAGAAGGAGTCATCTCAGACCGATCAACCTCCCCTAAGTCAATGGGCTGGTaGTTATACAGCGTTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQLRPGREGVISDRSTSPKSMGW*LYSVFL Trigger: GAGAAAAACGCTGTATAACAACCAGCCCATTGACTT...AGGGGAGGTTGATCGGTCTGAGATGACTCCTTCTCTTCCTGGTCTGAGCTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021197.10 |
||
| CDS CAA 90 bp | GCTCTTCTGGTTGGTGACTGGCTTGCCTTCCTGAGGCACAACGTGTaGAAACACATGCTGAGCACCCTGGACCGTGGCCCTCCTCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALLVGDWLAFLRHNV*KHMLSTLDRGPPQT Trigger: TGTCTGAGGAGGGCCACGGTCCAGGGTGCTCAGCATGTGTTTCAACACGTTGTGCCTCAGGAAGGCAAGCCAGTCACCAACCAGAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
||
| CDS CCA 72 bp | TGGCCCTCCTCAGACATATGTCCAGCAGATCGTGGGTaGTCCCGACATTCTGGGCAAGTACGAACTGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WPSSDICPADRG*SRHSGQVRTEG Trigger: ACCCTCAGTTCGTACTTGCCCAGAATGTCGGGACCACCCACGATCTGCTGGACATATGTCTGAGGAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
||
| CDS CCA 72 bp | CAACGTGTTGAAACACATGCTGAGCACCCTGGACCGTaGCCCTCCTCAGACATATGTCCAGCAGATCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QRVETHAEHPGP*PSSDICPADRG Trigger: CCCACGATCTGCTGGACATATGTCTGAGGAGGGCCACGGTCCAGGGTGCTCAGCATGTGTTTCAACACGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
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| CDS TCA 72 bp | AAAAGATCCAGCATCGTCCAGAGCTCTTCTGGTTGGTaGCTGGCTTGCCTTCCTGAGGCACAACGTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KRSSIVQSSSGW*LACLPEAQRVE Trigger: TTCAACACGTTGTGCCTCAGGAAGGCAAGCCAGTCACCAACCAGAAGAGCTCTGGACGATGCTGGATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 |
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| CDS TCA 72 bp | TCGTGGGTGGTCCCGACATTCTGGGCAAGTACGAACTaGGGGTCAGAATTTAGTTTCTGGATCAAAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SWVVPTFWASTN*GSEFSFWIKAD Trigger: ATCTGCTTTGATCCAGAAACTAAATTCTGACCCTCAGTTCGTACTTGCCCAGAATGTCGGGACCACCCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021197.10 ENSMUST00000146197.3 ENSMUST00000168124.2 |
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