Pregenerated sensors for BLK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014453Ensembl transcript IDs: ENSMUST00000014597.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCAGGGATGGGTAGGGGGCACACAGCCAGGGGACCTGGAGGATTaGCCCATAGTTCTGAAGCAGCAGACAGGGAGGCACTTGCTGATG | + |
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Preference number: 1 (lower is better) Translates to: MQGWVGGTQPGDLED*PIVLKQQTGRHLLM Trigger: CATCAGCAAGTGCCTCCCTGTCTGCTGCTTCAGAACTATGGGTCAATCCTCCAGGTCCCCTGGCTGTGTGCCCCCTACCCATCCCTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR TCA 90 bp | TCATGCCTCACCATGAAGCCATCTTTGTCTCCTGGCTCCCTCACTTaGGAAGCAGGCACACCATTCTTCCCTGATTCTGCAACCTACCTG | + |
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Preference number: 1 (lower is better) Translates to: SCLTMKPSLSPGSLT*EAGTPFFPDSATYL Trigger: CAGGTAGGTTGCAGAATCAGGGAAGAATGGTGTGCCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR CAA 90 bp | CATGCAGGGATGGGTAGGGGGCACACAGCCAGGGGACCTGGAGGATaGACCCATAGTTCTGAAGCAGCAGACAGGGAGGCACTTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: HAGMGRGHTARGPGG*THSSEAADREALAD Trigger: ATCAGCAAGTGCCTCCCTGTCTGCTGCTTCAGAACTATGGGTCAATCCTCCAGGTCCCCTGGCTGTGTGCCCCCTACCCATCCCTGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR-3UTR TCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGAAGGCACACAGCCAGTaGAAGGTGGACCGAGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMKAHSQ*KVDRGC Trigger: ACAACCTCGGTCCACCTTTCACTGGCTGTGTGCCTT...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR-3UTR TCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGGGGGACCTGGAGGATTaGCCCATAGTTCTGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMGDLED*PIVLKQ Trigger: CTGCTTCAGAACTATGGGTCAATCCTCCAGGTCCCC...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR TCA 72 bp | GACCGAGGTTGTGCCTTGAGAGCTCATGCCTCACCATaGAGCCATCTTTGTCTCCTGGCTCCCTCACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: DRGCALRAHASP*SHLCLLAPSLE Trigger: CTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCATGAGCTCTCAAGGCACAACCTCGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR TCA 72 bp | CACACAGCCAGTGAAAGGTGGACCGAGGTTGTGCCTTaGGAGCTCATGCCTCACCATGAAGCCATCTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: HTASERWTEVVP*ELMPHHEAIFV Trigger: GACAAAGATGGCTTCATGGTGAGGCATGAGCTCTCAAGGCACAACCTCGGTCCACCTTTCACTGGCTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| 3UTR CCA 72 bp | GAGCTCATGCCTCACCATGAAGCCATCTTTGTCTCCTaGCTCCCTCACTTGAGAAGCAGGCACACCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: ELMPHHEAIFVS*LPHLRSRHTIL Trigger: AAGAATGGTGTGCCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCATGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGGGTAGGCCGCTCCTCTaGCCGGCCCCGCCAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKGRPLL*PAPPAL Trigger: GAGTGCTGGCGGGGCCGGCCAGAGGAGCGGCCTACC...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGACACCCCGAAGTGGATaGCCTCCGGGGCGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKTPRSG*PPGRST Trigger: AGTGGACCGCCCCGGAGGCCATCCACTTCGGGGTGT...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | GACGACACAGAGCAGCAAAGTAACTTGGCCAAAGGCACACAGCCAGTGAAAGGTCCTCCCCCTGGGTGGTaGTATCTTTCACGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: DDTEQQSNLAKGTQPVKGPPPGW*YLSRTG Trigger: CCCTGTCCGTGAAAGATATCACCACCCAGGGGGAGG...ACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | GACGACACAGAGCAGCAAAGTAACTTGGCCAAAGGCACACAGCCAGTGAAAGGTGCTCCAGGCTACGGATaGCCTCAGGGTTGCTCATTC | + |
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Preference number: 4 (lower is better) Translates to: DDTEQQSNLAKGTQPVKGAPGYG*PQGCSF Trigger: GAATGAGCAACCCTGAGGTCATCCGTAGCCTGGAGC...ACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | ATGCCTCACCATGAAGCCATCTTTGTCTCCTGGCTCCCTCACTTGAGAAGCAGGACCACCAGTCTCCAGTaGTCCTCAAGACCTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: MPHHEAIFVSWLPHLRSRTTSLQ*SSRPGA Trigger: AGCTCCAGGTCTTGAGGAGCACTGGAGACTGGTGGT...CCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | GACGACACAGAGCAGCAAAGTAACTTGGCCAAAGGCACACAGCCAGTGAAAGGTATCGGAGCCAGCAACTaGCTCTCAGCATCCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: DDTEQQSNLAKGTQPVKGIGASN*LSASFR Trigger: CCGGAAGGATGCTGAGAGGCAGTTGCTGGCTCCGAT...ACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGCAGACTTCGCCAAACTaGCCAGACCCAAGTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKQTSPN*PDPSFR Trigger: CCGGAAACTTGGGTCTGGGCAGTTTGGCGAAGTCTG...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | ATGCCTCACCATGAAGCCATCTTTGTCTCCTGGCTCCCTCACTTGAGAAGCAGGAAATGGGCTCTCTGGTaGCCACAGCGTAGAGACGAA | + |
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Preference number: 4 (lower is better) Translates to: MPHHEAIFVSWLPHLRSRKWALW*PQRRDE Trigger: TTCGTCTCTACGCTGTGGTCACCAGAGAGCCCATTT...CCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGGAACGCGCCCATAGGTaGCAATCTCCATCAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKERAHR*QSPSAR Trigger: TCTTGCTGATGGAGATTGTCACCTATGGGCGCGTTC...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGATCCCCTCTGCAACCTaGGCTGACATGTCAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKIPSAT*ADMSIS Trigger: GCTGATTGACATGTCAGCCCAGGTTGCAGAGGGGAT...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | CTTGAGAAGCAGGCACACCATTCTTCCCTGATTCTGCAACCTACCTGGAAGAAGCTCTGCAACCTGGGCTaGCATGTCAATCAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LEKQAHHSSLILQPTWKKLCNLG*HVNQPW Trigger: CCAAGGCTGATTGACATGTCAGCCCAGGTTGCAGAG...CTTCTTCCAGGTAGGTTGCAGAATCAGGGAAGAATGGTGTGCCTGCTTCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGCATGTCAATCAGCCTTaGAAGGGACAACCTGCTACC | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKHVNQP*KGQPAT Trigger: GGTAGCAGGTTGTCCCTTCCAAGGCTGATTGACATG...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | ATGCCTCACCATGAAGCCATCTTTGTCTCCTGGCTCCCTCACTTGAGAAGCAGGAACTTGGCCCCCTCTTaGGCAGTGTATTCACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: MPHHEAIFVSWLPHLRSRNLAPS*AVYSLS Trigger: TGACAGTGAATACACTGCCCAAGAGGGGGCCAAGTT...CCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | CTTGAGAAGCAGGCACACCATTCTTCCCTGATTCTGCAACCTACCTGGAAGAAGCGAACCAGCCTCTCATaGTGCAGGGTTTTCATCACG | + |
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Preference number: 4 (lower is better) Translates to: LEKQAHHSSLILQPTWKKRTSLS*CRVFIT Trigger: CGTGATGAAAACCCTGCAGCATGAGAGGCTGGTTCG...CTTCTTCCAGGTAGGTTGCAGAATCAGGGAAGAATGGTGTGCCTGCTTCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | CATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCTCAGGCTGGGAGCCCTGAAGTTGGAAGGGACAACCTaGTACCTTCATCGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HINPKSESRRRLRLGALKLEGTT*YLHRSS Trigger: TGAAGACCGATGAAGGTAGCAGGTTGTCCCTTCCAA...CTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCTGACTTTGGGTTAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | GGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCCTTGCCCTTCTCACTaGCCTGCCTCTTGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GRRAKCEHINPKSESRRRPCPSH*PASCCS Trigger: TGAGCAGCAAGAGGCAGGTCAGTGAGAAGGGCAAGG...CCTCCTTCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | CTACCTGGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGATCTTCCTGTGACGAGTaGCCTGGCCAACCACCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LPGRRAKCEHINPKSESRSSCDE*PGQPPV Trigger: GACTGGTGGTTGGCCAGGTCACTCGTCACAGGAAGA...TCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CTACCTGGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAGCCCGCAGGTCACGGTaGATGGAATTCATGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPGRRAKCEHINPKSESRARRSR*MEFMRS Trigger: AGAGCGCATGAATTCCATCCACCGTGACCTGCGGGC...TCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | CTACCTGGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAAACCTTCTCTTCCTGTaGCGAGTGACCTGGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: LPGRRAKCEHINPKSESRNLLFL*RVTWPT Trigger: GGTTGGCCAGGTCACTCGTCACAGGAAGAGAAGGTT...TCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CTACCTGGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAGATGGTGGGGCAAGGTaGTTGAAGACAACCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LPGRRAKCEHINPKSESRDGGAR*LKTTRG Trigger: ACCCCTGGTTGTCTTCAACCACCTTGCCCCACCATC...TCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | GGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAAGGAGGGTCCTGGTTAGGAGATaGTGGGGCAAGGTGGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GRRAKCEHINPKSESRRRVLVRR*WGKVVE Trigger: TTCAACCACCTTGCCCCACCATCTCCTAACCAGGAC...CCTCCTTCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAAGGAGGACCAGCCTCTCATGCTaGAGGGTTTTCATCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: GRRAKCEHINPKSESRRRTSLSC*RVFITL Trigger: CAACGTGATGAAAACCCTGCAGCATGAGAGGCTGGT...CCTCCTTCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | CTACCTGGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAATTGTACAACTCCGGTaGACATGTCTCCGGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LPGRRAKCEHINPKSESRIVQLR*TCLRAW Trigger: CCATGCCCGGAGACATGTCCACCGGAGTTGTACAAT...TCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGGGATCTTATAGTGCTTaGCCACCTCCCCCTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMGSYSA*PPPPGW Trigger: CCACCCAGGGGGAGGTGGTCAAGCACTATAAGATCC...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR GCA 90 bp | CTACCTGGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAACCAACTTGAGAGACTaGCTGGGGATTTCCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: LPGRRAKCEHINPKSESRTNLRD*LGISHS Trigger: TGAATGGGAAATCCCCAGGCAGTCTCTCAAGTTGGT...TCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGCTGGTTAGGAGATGGTaGGGCAAGGTGGTTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMLVRRW*GKVVED Trigger: GTCTTCAACCACCTTGCCCCACCATCTCCTAACCAG...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGACGCTCCTCTTCATCTaGGTCCTGGTTAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMTLLFI*VLVRRW Trigger: CCATCTCCTAACCAGGACCCAGATGAAGAGGAGCGT...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGTTGACCACCTCCCCCTaGGTGGTGATATCTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMLTTSP*VVISFT Trigger: CGTGAAAGATATCACCACCCAGGGGGAGGTGGTCAA...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGAAGCTTCCGGTGACATaGTTCCCTCCTTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMKLPVT*FPPSGS Trigger: AGACCCTGAAGGAGGGAACCATGTCACCGGAAGCTT...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR TCA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGGGCAGAGTCAACTTCTaGCACAAACCATCCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMGRVNF*HKPSPF Trigger: GAAAGGGGATGGTTTGTGTCAGAAGTTGACTCTGCC...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS TCA 90 bp | ATGTCTCCGGGCATGGCATTCGGTAGCCGTGCTCCAGGCTACGGATaGCCTCAGGGTTGCTCATTCCTGGGTAGGGAACGCGCCCATAGG | + |
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Preference number: 5 (lower is better) Translates to: MSPGMAFGSRAPGYG*PQGCSFLGRERAHR Trigger: CCTATGGGCGCGTTCCCTACCCAGGAATGAGCAACCCTGAGGTCATCCGTAGCCTGGAGCACGGCTACCGAATGCCATGCCCGGAGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CCA 90 bp | CCGGCCCCGCCAGCACTCAGTGATGATATCATTGTACAACTCCGGTaGACATGTCTCCGGGCATGGCATTCGGTAGCCGTGCTCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PAPPALSDDIIVQLR*TCLRAWHSVAVLQA Trigger: AGCCTGGAGCACGGCTACCGAATGCCATGCCCGGAGACATGTCCACCGGAGTTGTACAATGATATCATCACTGAGTGCTGGCGGGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | GACGACACAGAGCAGCAAAGTAACTTGGCCAAAGGCACACAGCCAGTGAAAGGTACGGGGCTCCAGCCCTaGCCCTTCTCACTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: DDTEQQSNLAKGTQPVKGTGLQP*PFSLTC Trigger: GCAGGTCAGTGAGAAGGGCAAGGGCTGGAGCCCCGT...ACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | GACGACACAGAGCAGCAAAGTAACTTGGCCAAAGGCACACAGCCAGTGAAAGGTGGTGGGGCAAGGTGGTaGAAGACAACCAGGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: DDTEQQSNLAKGTQPVKGGGARW*KTTRGG Trigger: GCCACCCCTGGTTGTCTTCAACCACCTTGCCCCACC...ACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | ATGCCTCACCATGAAGCCATCTTTGTCTCCTGGCTCCCTCACTTGAGAAGCAGGAGAAAGGAGCCGGCCTaGTTCATCGGAGCCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: MPHHEAIFVSWLPHLRSRRKEPA*FIGASN Trigger: GTTGCTGGCTCCGATGAACAAGGCCGGCTCCTTTCT...CCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | GACGACACAGAGCAGCAAAGTAACTTGGCCAAAGGCACACAGCCAGTGAAAGGTGGGCTGCAGCTCATATaGGCCCTCCGTGGCTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: DDTEQQSNLAKGTQPVKGGLQLI*ALRGCV Trigger: TACACAGCCACGGAGGGCCAATATGAGCTGCAGCCC...ACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CCA 90 bp | AGTGATGATATCATTGTACAACTCCGGTGGACATGTCTCCGGGCATaGCATTCGGTAGCCGTGCTCCAGGCTACGGATGACCTCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: SDDIIVQLRWTCLRA*HSVAVLQATDDLRV Trigger: AACCCTGAGGTCATCCGTAGCCTGGAGCACGGCTACCGAATGCCATGCCCGGAGACATGTCCACCGGAGTTGTACAATGATATCATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | GGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAAGGAGGAGGGGTGGGGGAGCCTaGTCCTGGGTGCGGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: GRRAKCEHINPKSESRRRRGGGA*SWVRIF Trigger: GAAGATCCGCACCCAGGACAAGGCTCCCCCACCCCT...CCTCCTTCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGCAGGCACACCATTCTTCCCTGATTCTGCAACCTACCTGGAAGAAGAGGGTTTTCATCACGTaGGCCTCGCCCAGGAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: LEKQAHHSSLILQPTWKKRVFIT*ASPRKA Trigger: AGCTTTCCTGGGCGAGGCCAACGTGATGAAAACCCT...CTTCTTCCAGGTAGGTTGCAGAATCAGGGAAGAATGGTGTGCCTGCTTCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | GGAAGAAGAGCTAAGTGTGAACATATTAACCCAAAGTCAGAGTCCAGAAGGAGGCACTTGATGGGGAACTaGGCCCCCTCTTGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GRRAKCEHINPKSESRRRHLMGN*APSWAV Trigger: CACTGCCCAAGAGGGGGCCAAGTTCCCCATCAAGTG...CCTCCTTCTGGACTCTGACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGCAGGCACACCATTCTTCCCTGATTCTGCAACCTACCTGGAAGAAGAACCATCCCCTTTCTTaGAATAGTGCTGCACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LEKQAHHSSLILQPTWKKNHPLS*NSAAPG Trigger: CCCTGGTGCAGCACTATTCAAAGAAAGGGGATGGTT...CTTCTTCCAGGTAGGTTGCAGAATCAGGGAAGAATGGTGTGCCTGCTTCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGGAACTTGGCCCCCTCTaGGGCAGTGTATTCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMELGPL*GSVFTV Trigger: GACAGTGAATACACTGCCCAAGAGGGGGCCAAGTTC...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS-3UTR CAA 90 bp | TACAATTCTCATGACTTTATTATAGAAAAGTCCCAAAGTGTGCATGCAGGGATGAGTTTCCGGACCAACTaGAGAGACTGCCTGGGGATT | + |
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Preference number: 5 (lower is better) Translates to: YNSHDFIIEKSQSVHAGMSFRTN*RDCLGI Trigger: AATCCCCAGGCAGTCTCTCAAGTTGGTCCGGAAACT...CATCCCTGCATGCACACTTTGGGACTTTTCTATAATAAAGTCATGAGAATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS TCA 72 bp | GGCATGGCATTCGGTAGCCGTGCTCCAGGCTACGGATaGCCTCAGGGTTGCTCATTCCTGGGTAGGGAACGC | + |
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Preference number: 6 (lower is better) Translates to: GMAFGSRAPGYG*PQGCSFLGRER Trigger: GCGTTCCCTACCCAGGAATGAGCAACCCTGAGGTCATCCGTAGCCTGGAGCACGGCTACCGAATGCCATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CAA 72 bp | TCTGGCCGGCCCCGCCAGCACTCAGTGATGATATCATaGTACAACTCCGGTGGACATGTCTCCGGGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SGRPRQHSVMIS*YNSGGHVSGHG Trigger: GCCATGCCCGGAGACATGTCCACCGGAGTTGTACAATGATATCATCACTGAGTGCTGGCGGGGCCGGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CCA 72 bp | ACGCTCCTCTTCATCTGGGTCCTGGTTAGGAGATGGTaGGGCAAGGTGGTTGAAGACAACCAGGGGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TLLFIWVLVRRW*GKVVEDNQGWQ Trigger: CTGCCACCCCTGGTTGTCTTCAACCACCTTGCCCCACCATCTCCTAACCAGGACCCAGATGAAGAGGAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CCA 72 bp | ATCATTGTACAACTCCGGTGGACATGTCTCCGGGCATaGCATTCGGTAGCCGTGCTCCAGGCTACGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: IIVQLRWTCLRA*HSVAVLQATDD Trigger: GTCATCCGTAGCCTGGAGCACGGCTACCGAATGCCATGCCCGGAGACATGTCCACCGGAGTTGTACAATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CCA 72 bp | AGAGCCACCACAAAACGCTCCTCTTCATCTGGGTCCTaGTTAGGAGATGGTGGGGCAAGGTGGTTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: RATTKRSSSSGS*LGDGGARWLKT Trigger: TGTCTTCAACCACCTTGCCCCACCATCTCCTAACCAGGACCCAGATGAAGAGGAGCGTTTTGTGGTGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CCA 72 bp | CCAGCACTCAGTGATGATATCATTGTACAACTCCGGTaGACATGTCTCCGGGCATGGCATTCGGTAGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: PALSDDIIVQLR*TCLRAWHSVAV Trigger: CACGGCTACCGAATGCCATGCCCGGAGACATGTCCACCGGAGTTGTACAATGATATCATCACTGAGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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| CDS CAA 72 bp | GCAGAGTCAACTTCTGACACAAACCATCCCCTTTCTTaGAATAGTGCTGCACCAGGGCCTGGAGGGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AESTSDTNHPLS*NSAAPGPGGWE Trigger: TTCCCACCCTCCAGGCCCTGGTGCAGCACTATTCAAAGAAAGGGGATGGTTTGTGTCAGAAGTTGACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014597.5 |
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