Pregenerated sensors for BIVM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041684Ensembl transcript IDs: ENSMUST00000035991.8, ENSMUST00000114709.3, ENSMUST00000155917.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACCTAATTGCTTGGAGGTTTCACAAAAGGAAACGGCTCAGAGTTaGAAATACAAAGTCTTCCTCAGAGTGAGCTGGACATTGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: TPNCLEVSQKETAQS*KYKVFLRVSWTLPT Trigger: TGTTGGCAATGTCCAGCTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCTCCAAGCAATTAGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR TCA 90 bp | GGCAGCAAAAGGAAAACAAGAGCCGCTAAAGAGGAGCTCAAGTATTaGACTCACACTTCCAGAATATGTAACTCACACTTCCAACACCTA | + |
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Preference number: 1 (lower is better) Translates to: GSKRKTRAAKEELKY*THTSRICNSHFQHL Trigger: TAGGTGTTGGAAGTGTGAGTTACATATTCTGGAAGTGTGAGTTCAATACTTGAGCTCCTCTTTAGCGGCTCTTGTTTTCCTTTTGCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CCA 90 bp | TGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATaGGAGGTGGATACTGTTAGCACTGAAAGAACAACTAGACTAGAA | + |
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Preference number: 1 (lower is better) Translates to: CCFLENPESYSGKQR*EVDTVSTERTTRLE Trigger: TTCTAGTCTAGTTGTTCTTTCAGTGCTAACAGTATCCACCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CCA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTaGAGTAGTTTCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: NDLSHLSAPREKVSF*SSFCCFLENPESYS Trigger: TGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CCA 90 bp | CACACTTCCAGAATATGTAACTCACACTTCCAACACCTAATTGCTTaGAGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAG | + |
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Preference number: 1 (lower is better) Translates to: HTSRICNSHFQHLIA*RFHKRKRLRVENTK Trigger: CTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCTCCAAGCAATTAGGTGTTGGAAGTGTGAGTTACATATTCTGGAAGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR TCA 90 bp | CCTAAATCACGTTGTGAAGGATTAGAGAATCAGTGCTCAAGTACTTaGAAAGTAGCAAGCATGGAATGGAAGTTATTGGCTTTTCACATT | + |
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Preference number: 1 (lower is better) Translates to: PKSRCEGLENQCSST*KVASMEWKLLAFHI Trigger: AATGTGAAAAGCCAATAACTTCCATTCCATGCTTGCTACTTTTCAAGTACTTGAGCACTGATTCTCTAATCCTTCACAACGTGATTTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114709.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAAAGTCTTCCTCAGAGTaGGCTGGACATTGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: KSSIIDGYESHLGSKRKTKSSSE*AGHCQH Trigger: ATGTTGGCAATGTCCAGCTCACTCTGAGGAAGACTT...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CAA 90 bp | GCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTTCTGCTGCTTTTaGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATGGGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: APREKVSFWSSFCCF*ENPESYSGKQRWEV Trigger: CACCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAGAGGAGCTCAAGTATTaGACTCACACTTCCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: KSSIIDGYESHLGSKRKTEELKY*THTSRI Trigger: TATTCTGGAAGTGTGAGTTCAATACTTGAGCTCCTC...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CAA 90 bp | CTTCCTCAGAGTGAGCTGGACATTGCCAACATGACATCAGTGCTGTaGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATC | + |
|
Preference number: 2 (lower is better) Translates to: LPQSELDIANMTSVL*LTHDSIKRQVKCDI Trigger: GATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAGCACTGATGTCATGTTGGCAATGTCCAGCTCACTCTGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAGAAAAGGTCAGTTTCTaGAGTAGTTTCTGCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KSSIIDGYESHLGSKRKTEKVSF*SSFCCF Trigger: AAAGCAGCAGAAACTACTCCAGAAACTGACCTTTTC...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATGGGAGGTTGTATTGGATTTTGTaGAACCCTTTGTCCAGATTG | + |
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Preference number: 2 (lower is better) Translates to: SAAFWRILRVIQESNDGRLYWIL*NPLSRL Trigger: CAATCTGGACAAAGGGTTTCACAAAATCCAATACAA...CCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTAGTTTCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAATACATAACAGCTGTGTaGGTAACACCAGTGGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: WSSFCCFLENPESYSGKQYITAV*VTPVAK Trigger: CTTAGCCACTGGTGTTACCCACACAGCTGTTATGTA...TTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGTACATAACAGCTGTGTaGGTAACACCAGTGGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: FTKGNGSELKIQSLPQSEYITAV*VTPVAK Trigger: CTTAGCCACTGGTGTTACCCACACAGCTGTTATGTA...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGAGCAACGATGGGAGGTaGATACTGTTAGCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: RFHKRKRLRVENTKSSSESNDGR*ILLALK Trigger: TTTCAGTGCTAACAGTATCCACCTCCCATCGTTGCT...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAGTTTCTGCTGCTTTTTaGAGAATCCTGAGAGTTATT | + |
|
Preference number: 2 (lower is better) Translates to: KSSIIDGYESHLGSKRKTVSAAF*RILRVI Trigger: AATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAAC...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACACAACACCTAATTGCTTaGAGGTTTCACAAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KSSIIDGYESHLGSKRKTQHLIA*RFHKRK Trigger: TTTCCTTTTGTGAAACCTCCAAGCAATTAGGTGTTG...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR GCA 90 bp | CATGTTACCGTGGATAAGGAAACTTTGGATGCCAAGTGCTCTCTAACTATATCCTTCTGGAGTAGTTTCTaGTGCTTTTTGGAGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: HVTVDKETLDAKCSLTISFWSSF*CFLENP Trigger: AGGATTCTCCAAAAAGCAGCAGAAACTACTCCAGAA...GGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR TCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGTTGTATTGGATTTTGTaGAACCCTTTGTCCAGATTG | + |
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Preference number: 2 (lower is better) Translates to: LTHDSIKRQVKCDISQHMLYWIL*NPLSRL Trigger: CAATCTGGACAAAGGGTTTCACAAAATCCAATACAA...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR TCA 72 bp | ACCTACGACGTGAAAGAGCAGCATCATAGACGGCTATaGGTCACACCTTGGCAGCAAAAGGAAAACAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: TYDVKEQHHRRL*VTPWQQKENKS Trigger: GCTCTTGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTTTCACGTCGTAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR TCA 72 bp | CGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTaGGCTGGACATTGCCAACATGACATCAGTGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: RLRVENTKSSSE*AGHCQHDISAV Trigger: AACAGCACTGATGTCATGTTGGCAATGTCCAGCTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR TCA 72 bp | TGCTTGGAGGTTTCACAAAAGGAAACGGCTCAGAGTTaGAAATACAAAGTCTTCCTCAGAGTGAGCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: CLEVSQKETAQS*KYKVFLRVSWT Trigger: TGTCCAGCTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCTCCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | GACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTTCACTACAGGGTGTGTTTaGTACCACAAAATCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: DLSHLSAPREKVSFWSSFTTGCV*YHKICS Trigger: GGAACAGATTTTGTGGTACAAAACACACCCTGTAGT...GAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACATACCTGCCTGTATATTaGAAGCCAACCATAGTAATC | + |
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Preference number: 3 (lower is better) Translates to: KSSIIDGYESHLGSKRKTYLPVY*KPTIVI Trigger: GATTACTATGGTTGGCTTCAAATATACAGGCAGGTA...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAAGTTTCTGCTGCTTTTaGGAGAATCCTGAGAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: KSSIIDGYESHLGSKRKTSFCCF*ENPESY Trigger: ATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACT...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR GCA 72 bp | GCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTTCTaGTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: APREKVSFWSSF*CFLENPESYSG Trigger: TCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CCA 72 bp | TTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATaGGAGGTGGATACTGTTAGCACTGAAAGAACAACT | + |
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Preference number: 3 (lower is better) Translates to: LENPESYSGKQR*EVDTVSTERTT Trigger: AGTTGTTCTTTCAGTGCTAACAGTATCCACCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGGTGGATAAGGAAACTTaGGATGCCAAGTGCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: FTKGNGSELKIQSLPQSEVDKET*DAKCSL Trigger: TAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCAC...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGACTACAGGGTGTGTTTaGTACCACAAAATCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LTHDSIKRQVKCDISQHMTTGCV*YHKICS Trigger: GGAACAGATTTTGTGGTACAAAACACACCCTGTAGT...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR TCA 72 bp | CGTTGTGAAGGATTAGAGAATCAGTGCTCAAGTACTTaGAAAGTAGCAAGCATGGAATGGAAGTTATTGGCT | + |
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Preference number: 3 (lower is better) Translates to: RCEGLENQCSST*KVASMEWKLLA Trigger: AGCCAATAACTTCCATTCCATGCTTGCTACTTTTCAAGTACTTGAGCACTGATTCTCTAATCCTTCACAACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114709.3 |
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| 3UTR GCA 72 bp | GACCTATATTCTTCTTGTAGCTATTTCACAACCACGTaGCAAGTCAAGAGTATCAGGATCAATGACCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: DLYSSCSYFTTT*QVKSIRINDLS Trigger: ACTTAGGTCATTGATCCTGATACTCTTGACTTGGCACGTGGTTGTGAAATAGCTACAAGAAGAATATAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR CCA 72 bp | AGAATATGTAACTCACACTTCCAACACCTAATTGCTTaGAGGTTTCACAAAAGGAAACGGCTCAGAGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: RICNSHFQHLIA*RFHKRKRLRVE Trigger: TTCAACTCTGAGCCGTTTCCTTTTGTGAAACCTCCAAGCAATTAGGTGTTGGAAGTGTGAGTTACATATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGTACCTGCCTGTATATTaGAAGCCAACCATAGTAATC | + |
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Preference number: 3 (lower is better) Translates to: LLLTHDSIKRQVKCDISQYLPVY*KPTIVI Trigger: GATTACTATGGTTGGCTTCAAATATACAGGCAGGTA...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| 3UTR-3UTR CAA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGTGCTTTGAAGCCGTTTaGATTGTATTGGATTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LTHDSIKRQVKCDISQHMCFEAV*IVLDFV Trigger: CACAAAATCCAATACAATCAAAACGGCTTCAAAGCA...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR GCA 90 bp | GACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTTCCTGCCCAGGCGCCCATaGTGCTTCTTAGAGATATTG | + |
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Preference number: 4 (lower is better) Translates to: DLSHLSAPREKVSFWSSFLPRRP*CFLEIL Trigger: CAATATCTCTAAGAAGCAGCATGGGCGCCTGGGCAG...GAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACACATGTCCAGGATCAGTaGCTTTTCCAGCTTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KSSIIDGYESHLGSKRKTHVQDQ*LFQLQW Trigger: CCACTGAAGCTGGAAAAGCCACTGATCCTGGACATG...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGCTCCTCTGGGCGCTATaGGTGCTTCTGAGGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSELLWAL*VLLRHL Trigger: CAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAG...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGCTCCTCTGGGCGCTATaGGTGCTTCTGAGGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMLLWAL*VLLRHL Trigger: CAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAG...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CCA 90 bp | GACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTTCCCTCACTCTCAGATTTaGCAATTCCCGGGACATGTG | + |
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Preference number: 4 (lower is better) Translates to: DLSHLSAPREKVSFWSSFPHSQI*QFPGHV Trigger: CACATGTCCCGGGAATTGCCAAATCTGAGAGTGAGG...GAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR TCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTTCCATGCCGAGTCCTaGTGGAAACTCGCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RFHKRKRLRVENTKSSSEFHAES*WKLALK Trigger: CTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAA...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR TCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGTTCCATGCCGAGTCCTaGTGGAAACTCGCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSEFHAES*WKLALK Trigger: CTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAA...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR GCA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTGGGCCCCCTGCTGAATaGTTTATTAGCTTTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: NDLSHLSAPREKVSFWSSGPPAE*FISFHR Trigger: CCTGTGAAAGCTAATAAAGCATTCAGCAGGGGGCCC...ACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR GCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGCCCAGGCGCCCATGCTaGTTCTTAGAGATATTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RFHKRKRLRVENTKSSSEPRRPC*FLEILS Trigger: GGACAATATCTCTAAGAAGCAGCATGGGCGCCTGGG...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR GCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGCCCAGGCGCCCATGCTaGTTCTTAGAGATATTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSEPRRPC*FLEILS Trigger: GGACAATATCTCTAAGAAGCAGCATGGGCGCCTGGG...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR GCA 90 bp | TGGAGTAGTTTCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACTGCCCAGGCGCCCATaGTGCTTCTTAGAGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSFCCFLENPESYSGKQLPRRP*CFLEIL Trigger: CAATATCTCTAAGAAGCAGCATGGGCGCCTGGGCAG...TTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATGGGAGGGCTTGCCCATGCCAGTaGACAAGTTTTCCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAAFWRILRVIQESNDGRACPCQ*TSFPSY Trigger: ATAACTTGGAAAACTTGTCCACTGGCATGGGCAAGC...CCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACATGCCAACTGAGTCTCTaGAATGCTATGATGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSIIDGYESHLGSKRKTCQLSL*NAMMQC Trigger: GCATTGCATCATAGCATTCCAGAGACTCAGTTGGCA...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAGTCTCTGGAATGCTATaGTGCAATGCAAATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSSIIDGYESHLGSKRKTVSGML*CNANFL Trigger: GAGGAAATTTGCATTGCATCATAGCATTCCAGAGAC...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGGAGGTAGCTTGCCCATaGCAGTGGACAAGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFHKRKRLRVENTKSSSEEVACP*QWTSFP Trigger: TGGAAAACTTGTCCACTGGCATGGGCAAGCTACCTC...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGGAGGTAGCTTGCCCATaGCAGTGGACAAGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSEEVACP*QWTSFP Trigger: TGGAAAACTTGTCCACTGGCATGGGCAAGCTACCTC...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | CATGTTACCGTGGATAAGGAAACTTTGGATGCCAAGTGCTCTCTAACTATATCCCACTGGACAACTCGATaGATAATGCCCATCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVTVDKETLDAKCSLTISHWTTR*IMPISS Trigger: AGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTG...GGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | CATGTTACCGTGGATAAGGAAACTTTGGATGCCAAGTGCTCTCTAACTATATCCTTCTTGGGTAATAGGTaGGAGATTCCCAGCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVTVDKETLDAKCSLTISFLGNR*EIPSSH Trigger: ATGGGAGCTGGGAATCTCCCACCTATTACCCAAGAA...GGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACATGTAATGCCTCTTCTTaGGTAATAGGTGGGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KSSIIDGYESHLGSKRKTCNASS*VIGGRF Trigger: GAATCTCCCACCTATTACCCAAGAAGAGGCATTACA...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGCCTCACTCTCAGATTTaGCAATTCCCGGGACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFHKRKRLRVENTKSSSEPHSQI*QFPGHV Trigger: CACATGTCCCGGGAATTGCCAAATCTGAGAGTGAGG...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| 3UTR CAA 72 bp | TTGCTTGGAGGTTTCACAAAAGGAAACGGCTCAGAGTaGAAAATACAAAGTCTTCCTCAGAGTGAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGGFTKGNGSE*KIQSLPQSELD Trigger: GTCCAGCTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCTCCAAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | CATGTTACCGTGGATAAGGAAACTTTGGATGCCAAGTGCTCTCTAACTATATCCATTTTCTCTCGAGTGTaGGTCACTGGACAACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HVTVDKETLDAKCSLTISIFSRV*VTGQLD Trigger: ATCGAGTTGTCCAGTGACTCACACTCGAGAGAAAAT...GGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATGGGAGGGAGGAAGGCATAATCTaGGCAGATCGCATAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAAFWRILRVIQESNDGREEGII*ADRINF Trigger: AAAATTTATGCGATCTGCTCAGATTATGCCTTCCTC...CCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGCTGATGTTGCCTGGTTaGGGAAGGCATAATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMLMLPG*GRHNLS Trigger: GCTCAGATTATGCCTTCCTCAACCAGGCAACATCAG...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACAATAGATATAAGCCAGTaGCTCATCTTTCAATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSSIIDGYESHLGSKRKTIDISQ*LIFQSS Trigger: CGAGGATTGAAAGATGAGTCACTGGCTTATATCTAT...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTAGCTTTCACAGGGGTTaGTTCAAAGCCAATTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NDLSHLSAPREKVSFWSSSFHRG*FKANWT Trigger: TGTCCAATTGGCTTTGAAGCAACCCCTGTGAAAGCT...ACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGGGGCCCCCTGCTGAATaGTTTATTAGCTTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLTHDSIKRQVKCDISQGPPAE*FISFHR Trigger: CCTGTGAAAGCTAATAAAGCATTCAGCAGGGGGCCC...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGATGGGAGGCCTAATATCTTCAAATaGGGGTTGGAAGCCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAAFWRILRVIQESNDGRPNIFK*GLEAQN Trigger: ATTTTGGGCTTCCAACCCCCATTTGAAGATATTAGG...CCTCCCATCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| 3UTR CAA 72 bp | CATCTCACAGCACATGTTACCGTGGATAAGGAAACTTaGGATGCCAAGTGCTCTCTAACTATATCCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLTAHVTVDKET*DAKCSLTISLK Trigger: TTTCAGGGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATGTGCTGTGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | GACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTTCATAGATATAAGCCAGTaGCTCATCTTTCAATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DLSHLSAPREKVSFWSSFIDISQ*LIFQSS Trigger: CGAGGATTGAAAGATGAGTCACTGGCTTATATCTAT...GAAACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | CATGTTACCGTGGATAAGGAAACTTTGGATGCCAAGTGCTCTCTAACTATATCCCAAAAGCCAAATCTCTaGCAACTGAGTCTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HVTVDKETLDAKCSLTISQKPNL*QLSLWN Trigger: ATTCCAGAGACTCAGTTGGCAGAGATTTGGCTTTTG...GGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGCACTGGACAACTCGATaGATAATGCCCATCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMHWTTR*IMPISS Trigger: AGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTG...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGTTCTTGGGTAATAGGTaGGAGATTCCCAGCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTHDSIKRQVKCDISQFLGNR*EIPSSH Trigger: ATGGGAGCTGGGAATCTCCCACCTATTACCCAAGAA...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGTGCCAACTGAGTCTCTaGAATGCTATGATGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSECQLSL*NAMMQC Trigger: GCATTGCATCATAGCATTCCAGAGACTCAGTTGGCA...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| 3UTR CAA 72 bp | GAAAAGGTCAGTTTCTGGAGTAGTTTCTGCTGCTTTTaGGAGAATCCTGAGAGTTATTCAGGAAAGCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: EKVSFWSSFCCF*ENPESYSGKQR Trigger: TCGTTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCAGAAACTGACCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGATTTTCTCTCGAGTGTaGGTCACTGGACAACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTHDSIKRQVKCDISQIFSRV*VTGQLD Trigger: ATCGAGTTGTCCAGTGACTCACACTCGAGAGAAAAT...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGGTCTCTGGAATGCTATaGTGCAATGCAAATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFHKRKRLRVENTKSSSEVSGML*CNANFL Trigger: GAGGAAATTTGCATTGCATCATAGCATTCCAGAGAC...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTCCCAGCTCCCATTATaGTGTATAAGAAATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NDLSHLSAPREKVSFWSSSQLPL*CIRNSN Trigger: GTTGGAATTTCTTATACAGCATAATGGGAGCTGGGA...ACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGGCTTGCCCATGCCAGTaGACAAGTTTTCCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMACPCQ*TSFPSY Trigger: ATAACTTGGAAAACTTGTCCACTGGCATGGGCAAGC...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGTCCCAGCTCCCATTATaGTGTATAAGAAATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSESQLPL*CIRNSN Trigger: GTTGGAATTTCTTATACAGCATAATGGGAGCTGGGA...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTAATGCTATGATGCAATaGAAATTTCCTCCAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDLSHLSAPREKVSFWSSNAMMQ*KFPPTF Trigger: GAAGGTTGGAGGAAATTTGCATTGCATCATAGCATT...ACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGCAAAAGCCAAATCTCTaGCAACTGAGTCTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMQKPNL*QLSLWN Trigger: ATTCCAGAGACTCAGTTGGCAGAGATTTGGCTTTTG...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGTGTAATGCCTCTTCTTaGGTAATAGGTGGGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMCNASS*VIGGRF Trigger: GAATCTCCCACCTATTACCCAAGAAGAGGCATTACA...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR TCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGGAGGAAGGCATAATCTaGGCAGATCGCATAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMEEGII*ADRINF Trigger: AAAATTTATGCGATCTGCTCAGATTATGCCTTCCTC...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCCTAATATCTTCAAATaGGGGTTGGAAGCCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTHDSIKRQVKCDISQPNIFK*GLEAQN Trigger: ATTTTGGGCTTCCAACCCCCATTTGAAGATATTAGG...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGATCAGTGACAATATCTaGCCATCTTTTACAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTKGNGSELKIQSLPQSEISDNI*PSFTVN Trigger: ATTCACTGTAAAAGATGGGCAGATATTGTCACTGAT...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGTAGTTTCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAAATCAGTGACAATATCTaGCCATCTTTTACAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSSFCCFLENPESYSGKQISDNI*PSFTVN Trigger: ATTCACTGTAAAAGATGGGCAGATATTGTCACTGAT...TTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR GCA 90 bp | TTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCACATGAATGCTATGATGCAATaGAAATTTCCTCCAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTHDSIKRQVKCDISQHMNAMMQ*KFPPTF Trigger: GAAGGTTGGAGGAAATTTGCATTGCATCATAGCATT...CATGTGCTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGATCTTTTACAGTGAATaGCAGGATGTTTTCTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFHKRKRLRVENTKSSSEIFYSE*QDVFYL Trigger: CAAGTAGAAAACATCCTGCCATTCACTGTAAAAGAT...CTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAGTTTCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAAATCTTTTACAGTGAATaGCAGGATGTTTTCTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSFCCFLENPESYSGKQIFYSE*QDVFYL Trigger: CAAGTAGAAAACATCCTGCCATTCACTGTAAAAGAT...TTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS TCA 90 bp | TTCCTCCTCTCGTGGATGCTAGACATGTTCTTCCATGCCGAGTCCTaGTGGAAACTCGCACTGAAGGACCTGCCCAGGCGCCCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLSWMLDMFFHAES*WKLALKDLPRRPCC Trigger: GCAGCATGGGCGCCTGGGCAGGTCCTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAAGAACATGTCTAGCATCCACGAGAGGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS GCA 90 bp | GTAGCCACTGTTCCTCCTCTCGTGGATGCTAGACATGTTCTTCCATaGCGAGTCCTGATGGAAACTCGCACTGAAGGACCTGCCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VATVPPLVDARHVLP*RVLMETRTEGPAQA Trigger: CGCCTGGGCAGGTCCTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAAGAACATGTCTAGCATCCACGAGAGGAGGAACAGTGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS GCA 90 bp | ACAGCACCTTGTAGACCCTCTTCTGGTGACTTGTTCTCAGATGTGTaGTCACCATGTCCAGGATCAGTGGCTTTTCCAGCTTCAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAPCRPSSGDLFSDV*SPCPGSVAFPASVA Trigger: CGCCACTGAAGCTGGAAAAGCCACTGATCCTGGACATGGTGAGCACACATCTGAGAACAAGTCACCAGAAGAGGGTCTACAAGGTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 ENSMUST00000155917.8 |
||
| CDS CCA 90 bp | TCACTGGACAACTCGATGGATAATGCCCATCTCCTCTGGGCGCTATaGGTGCTTCTGAGGCACTTGTATAGAAAGATGGTACAGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLDNSMDNAHLLWAL*VLLRHLYRKMVQHL Trigger: AAGGTGCTGTACCATCTTTCTATACAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
||
| CDS CCA 90 bp | GAGTGTGAGTCACTGGACAACTCGATGGATAATGCCCATCTCCTCTaGGCGCTATGGGTGCTTCTGAGGCACTTGTATAGAAAGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ECESLDNSMDNAHLL*ALWVLLRHLYRKMV Trigger: TACCATCTTTCTATACAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTGACTCACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGCATCATAGACGGCTATGAGTCACACCTTGGCAGCAAAAGGAAAACATCCTCACTCTCAGATTaGGCAATTCCCGGGACATGT | + |
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Preference number: 5 (lower is better) Translates to: KSSIIDGYESHLGSKRKTSSLSD*AIPGTC Trigger: ACATGTCCCGGGAATTGCCAAATCTGAGAGTGAGGA...TGTTTTCCTTTTGCTGCCAAGGTGTGACTCATAGCCGTCTATGATGCTGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS GCA 90 bp | AAGCCAAATCTCTGCCAACTGAGTCTCTGGAATGCTATGATGCAATaGAAATTTCCTCCAACCTTCTTTGTTTTCCGGAACTGCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: KPNLCQLSLWNAMMQ*KFPPTFFVFRNCSP Trigger: GGGGCTGCAGTTCCGGAAAACAAAGAAGGTTGGAGGAAATTTGCATTGCATCATAGCATTCCAGAGACTCAGTTGGCAGAGATTTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTTCCTCACTCTCAGATTaGGCAATTCCCGGGACATGT | + |
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Preference number: 5 (lower is better) Translates to: NDLSHLSAPREKVSFWSSSSLSD*AIPGTC Trigger: ACATGTCCCGGGAATTGCCAAATCTGAGAGTGAGGA...ACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGGTTTCTCCAGCTGTTTaGTTCTTCCCATGGGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: FTKGNGSELKIQSLPQSEVSPAV*FFPWGL Trigger: TAAGCCCCATGGGAAGAACAAAACAGCTGGAGAAAC...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | TGGAGTAGTTTCTGCTGCTTTTTGGAGAATCCTGAGAGTTATTCAGGAAAGCAAATACCACATGAAGTCTaGTACTGTGGTCGGCTTATG | + |
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Preference number: 5 (lower is better) Translates to: WSSFCCFLENPESYSGKQIPHEV*YCGRLM Trigger: CATAAGCCGACCACAGTACAAGACTTCATGTGGTAT...TTGCTTTCCTGAATAACTCTCAGGATTCTCCAAAAAGCAGCAGAAACTACTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGATACCACATGAAGTCTaGTACTGTGGTCGGCTTATG | + |
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Preference number: 5 (lower is better) Translates to: LLLTHDSIKRQVKCDISQIPHEV*YCGRLM Trigger: CATAAGCCGACCACAGTACAAGACTTCATGTGGTAT...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | CATGTTACCGTGGATAAGGAAACTTTGGATGCCAAGTGCTCTCTAACTATATCCCAGGATGTTTTCTACTaGACTCTCCAATTAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: HVTVDKETLDAKCSLTISQDVFY*TLQLKS Trigger: GGATTTTAATTGGAGAGTCAAGTAGAAAACATCCTG...GGATATAGTTAGAGAGCACTTGGCATCCAAAGTTTCCTTATCCACGGTAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | AATGACCTAAGTCACCTATCTGCACCTAGAGAAAAGGTCAGTTTCTGGAGTAGTCAGGATGTTTTCTACTaGACTCTCCAATTAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: NDLSHLSAPREKVSFWSSQDVFY*TLQLKS Trigger: GGATTTTAATTGGAGAGTCAAGTAGAAAACATCCTG...ACTACTCCAGAAACTGACCTTTTCTCTAGGTGCAGATAGGTGACTTAGGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | TTCACAAAAGGAAACGGCTCAGAGTTGAAAATACAAAGTCTTCCTCAGAGTGAGCTAAGGTCTAACACTTaGCGTTGTTTAACATCATCA | + |
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Preference number: 5 (lower is better) Translates to: FTKGNGSELKIQSLPQSELRSNT*RCLTSS Trigger: TGATGATGTTAAACAACGCAAAGTGTTAGACCTTAG...CTCACTCTGAGGAAGACTTTGTATTTTCAACTCTGAGCCGTTTCCTTTTGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS-3UTR CAA 90 bp | CTGTTGTTAACACATGACTCCATTAAGAGACAAGTCAAATGTGACATCTCACAGCTAAGGTCTAACACTTaGCGTTGTTTAACATCATCA | + |
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Preference number: 5 (lower is better) Translates to: LLLTHDSIKRQVKCDISQLRSNT*RCLTSS Trigger: TGATGATGTTAAACAACGCAAAGTGTTAGACCTTAG...CTGTGAGATGTCACATTTGACTTGTCTCTTAATGGAGTCATGTGTTAACAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS TCA 72 bp | TCGTGGATGCTAGACATGTTCTTCCATGCCGAGTCCTaGTGGAAACTCGCACTGAAGGACCTGCCCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SWMLDMFFHAES*WKLALKDLPRR Trigger: GCGCCTGGGCAGGTCCTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAAGAACATGTCTAGCATCCACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 90 bp | GCACTGAAGGACCTGCCCAGGCGCCCATGCTGCTTCTTAGAGATATaGTCCTCACTCTCAGATTTGGCAATTCCCGGGACATGTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ALKDLPRRPCCFLEI*SSLSDLAIPGTCVG Trigger: TCCCACACATGTCCCGGGAATTGCCAAATCTGAGAGTGAGGACAATATCTCTAAGAAGCAGCATGGGCGCCTGGGCAGGTCCTTCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 72 bp | GACCTGCCCAGGCGCCCATGCTGCTTCTTAGAGATATaGTCCTCACTCTCAGATTTGGCAATTCCCGGGACA | + |
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Preference number: 6 (lower is better) Translates to: DLPRRPCCFLEI*SSLSDLAIPGT Trigger: TGTCCCGGGAATTGCCAAATCTGAGAGTGAGGACAATATCTCTAAGAAGCAGCATGGGCGCCTGGGCAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS GCA 72 bp | GTTCCTCCTCTCGTGGATGCTAGACATGTTCTTCCATaGCGAGTCCTGATGGAAACTCGCACTGAAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: VPPLVDARHVLP*RVLMETRTEGP Trigger: AGGTCCTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAAGAACATGTCTAGCATCCACGAGAGGAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 90 bp | GATAATGCCCATCTCCTCTGGGCGCTATGGGTGCTTCTGAGGCACTaGTATAGAAAGATGGTACAGCACCTTGTAGACCCTCTTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: DNAHLLWALWVLLRH*YRKMVQHLVDPLLV Trigger: CACCAGAAGAGGGTCTACAAGGTGCTGTACCATCTTTCTATACAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAGATGGGCATTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 ENSMUST00000155917.8 |
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| CDS CCA 72 bp | TCACTGGACAACTCGATGGATAATGCCCATCTCCTCTaGGCGCTATGGGTGCTTCTGAGGCACTTGTATAGA | + |
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Preference number: 6 (lower is better) Translates to: SLDNSMDNAHLL*ALWVLLRHLYR Trigger: TCTATACAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CCA 72 bp | AATTTTCTCTCGAGTGTGAGTCACTGGACAACTCGATaGATAATGCCCATCTCCTCTGGGCGCTATGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NFLSSVSHWTTR*IMPISSGRYGC Trigger: GCACCCATAGCGCCCAGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTGACTCACACTCGAGAGAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS GCA 72 bp | TGTAGACCCTCTTCTGGTGACTTGTTCTCAGATGTGTaGTCACCATGTCCAGGATCAGTGGCTTTTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CRPSSGDLFSDV*SPCPGSVAFPA Trigger: AGCTGGAAAAGCCACTGATCCTGGACATGGTGAGCACACATCTGAGAACAAGTCACCAGAAGAGGGTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 ENSMUST00000155917.8 |
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| CDS CAA 72 bp | GATGGTACAGCACCTTGTAGACCCTCTTCTGGTGACTaGTTCTCAGATGTGTGCTCACCATGTCCAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: DGTAPCRPSSGD*FSDVCSPCPGS Trigger: TGATCCTGGACATGGTGAGCACACATCTGAGAACAAGTCACCAGAAGAGGGTCTACAAGGTGCTGTACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 ENSMUST00000155917.8 |
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| CDS CCA 72 bp | AACTCGATGGATAATGCCCATCTCCTCTGGGCGCTATaGGTGCTTCTGAGGCACTTGTATAGAAAGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: NSMDNAHLLWAL*VLLRHLYRKMV Trigger: TACCATCTTTCTATACAAGTGCCTCAGAAGCACCCATAGCGCCCAGAGGAGATGGGCATTATCCATCGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 ENSMUST00000155917.8 |
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| CDS CCA 72 bp | GCAGATCGCATAAATTTTCTCTCGAGTGTGAGTCACTaGACAACTCGATGGATAATGCCCATCTCCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ADRINFLSSVSH*TTRWIMPISSG Trigger: CCCAGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTGACTCACACTCGAGAGAAAATTTATGCGATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 72 bp | AAGCCAGTGACTCATCTTTCAATCCTCGGGTCAACTTaGATAAGGCCCCTGGAGCAGTTTCTCCAGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KPVTHLSILGST*IRPLEQFLQLF Trigger: AAACAGCTGGAGAAACTGCTCCAGGGGCCTTATCAAAGTTGACCCGAGGATTGAAAGATGAGTCACTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 90 bp | AGGCGCCCATGCTGCTTCTTAGAGATATTGTCCTCACTCTCAGATTaGGCAATTCCCGGGACATGTGTGGGATGTTGTGATTCTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: RRPCCFLEILSSLSD*AIPGTCVGCCDSCV Trigger: TACACAAGAATCACAACATCCCACACATGTCCCGGGAATTGCCAAATCTGAGAGTGAGGACAATATCTCTAAGAAGCAGCATGGGCGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS GCA 72 bp | TGCAAATTTCCTCCAACCTTCTTTGTTTTCCGGAACTaGAGCCCCCTCTCTAGATGTCGGATATCTAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: CKFPPTFFVFRN*SPLSRCRISKN Trigger: ATTCTTAGATATCCGACATCTAGAGAGGGGGCTGCAGTTCCGGAAAACAAAGAAGGTTGGAGGAAATTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 72 bp | CAACAAGAAATCAATGAGGAGATACCACATGAAGTCTaGTACTGTGGTCGGCTTATGCAGTACCATCGCCTA | + |
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Preference number: 6 (lower is better) Translates to: QQEINEEIPHEV*YCGRLMQYHRL Trigger: TAGGCGATGGTACTGCATAAGCCGACCACAGTACAAGACTTCATGTGGTATCTCCTCATTGATTTCTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CCA 72 bp | AAGTTCCAAAAGCCAAATCTCTGCCAACTGAGTCTCTaGAATGCTATGATGCAATGCAAATTTCCTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: KFQKPNLCQLSL*NAMMQCKFPPT Trigger: GGTTGGAGGAAATTTGCATTGCATCATAGCATTCCAGAGACTCAGTTGGCAGAGATTTGGCTTTTGGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 90 bp | AAGAAATTCCAACAAGAAATCAATGAGGAGATACCACATGAAGTCTaGTACTGTGGTCGGCTTATGCAGTACCATCGCCTAAGGTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: KKFQQEINEEIPHEV*YCGRLMQYHRLRSN Trigger: GTTAGACCTTAGGCGATGGTACTGCATAAGCCGACCACAGTACAAGACTTCATGTGGTATCTCCTCATTGATTTCTTGTTGGAATTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS GCA 72 bp | ATTTATCAATCTCCCATGCAAGAGGTAGCTTGCCCATaGCAGTGGACAAGTTTTCCAAGTTATTTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: IYQSPMQEVACP*QWTSFPSYFLH Trigger: ATGAAGAAAATAACTTGGAAAACTTGTCCACTGGCATGGGCAAGCTACCTCTTGCATGGGAGATTGATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS GCA 72 bp | ATTCAGATTTATCAATCTCCCATGCAAGAGGTAGCTTaGCCATGCCAGTGGACAAGTTTTCCAAGTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: IQIYQSPMQEVA*PCQWTSFPSYF Trigger: AAAATAACTTGGAAAACTTGTCCACTGGCATGGGCAAGCTACCTCTTGCATGGGAGATTGATAAATCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS TCA 72 bp | CTCTCTAGATGTCGGATATCTAAGAATTCTGGATTTTaGGTGTTTAGATCAGTGACAATATCTGCCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: LSRCRISKNSGF*VFRSVTISAHL Trigger: AAGATGGGCAGATATTGTCACTGATCTAAACACTCAAAATCCAGAATTCTTAGATATCCGACATCTAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CCA 72 bp | TTTATTAGCTTTCACAGGGGTTGCTTCAAAGCCAATTaGACAGAAATAGTGATTTTGGCAATGATAGATATA | + |
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Preference number: 6 (lower is better) Translates to: FISFHRGCFKAN*TEIVILAMIDI Trigger: TATATCTATCATTGCCAAAATCACTATTTCTGTCCAATTGGCTTTGAAGCAACCCCTGTGAAAGCTAATAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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| CDS CAA 72 bp | ATAAGAGCATCCTTTCACATGAAAGTGGTCATTAATTaGTCTAAACCATCTCATGAGTGTTGTATTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: IRASFHMKVVIN*SKPSHECCISS Trigger: ACTGGAAATACAACACTCATGAGATGGTTTAGACAAATTAATGACCACTTTCATGTGAAAGGATGCTCTTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035991.8 ENSMUST00000114709.3 |
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