Pregenerated sensors for BIRC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017716Ensembl transcript IDs: ENSMUST00000081387.11, ENSMUST00000093906.5
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTTACTCTGAGCTCTGGACTCTGGCCACCCTGACTCTTCATGCCTaGCTGCATGGGAGCCACCTCCCTGTGGACTCACCTGTGCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: VYSELWTLATLTLHA*LHGSHLPVDSPVPP Trigger: AGGAGGCACAGGTGAGTCCACAGGGAGGTGGCTCCCATGCAGCCAGGCATGAAGAGTCAGGGTGGCCAGAGTCCAGAGCTCAGAGTAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | TGCTTGCCACTCAGGTGGGAAGGTGACCTGCTCAGGAACCACCTTTaGAGCACCCTTCCTGAGCAGATCCCTAGGGCTTCTGGGGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CLPLRWEGDLLRNHL*STLPEQIPRASGGR Trigger: TCTGCCCCCAGAAGCCCTAGGGATCTGCTCAGGAAGGGTGCTTCAAAGGTGGTTCCTGAGCAGGTCACCTTCCCACCTGAGTGGCAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | TCTCCTTTGCCTGGAATGATGAACAGACACGAAGGGGCTGGGGTGTaGCCCAGAGGGCCAGGCTTGCCTGTCCAGGGTGAGATGCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: SPLPGMMNRHEGAGV*PRGPGLPVQGEMLV Trigger: AACTAGCATCTCACCCTGGACAGGCAAGCCTGGCCCTCTGGGCCACACCCCAGCCCCTTCGTGTCTGTTCATCATTCCAGGCAAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | CAAAATGGACCCAGGTTTACTCTGAGCTCTGGACTCTGGCCACCCTaGCTCTTCATGCCTGGCTGCATGGGAGCCACCTCCCTGTGGACT | + |
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Preference number: 1 (lower is better) Translates to: QNGPRFTLSSGLWPP*LFMPGCMGATSLWT Trigger: AGTCCACAGGGAGGTGGCTCCCATGCAGCCAGGCATGAAGAGTCAGGGTGGCCAGAGTCCAGAGCTCAGAGTAAACCTGGGTCCATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR GCA 90 bp | TTCATGCCTGGCTGCATGGGAGCCACCTCCCTGTGGACTCACCTGTaGCTCCTGCTTCCCAATCAACTTCACGTGACAGGAGGCAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: FMPGCMGATSLWTHL*LLLPNQLHVTGGKA Trigger: AGCTTTGCCTCCTGTCACGTGAAGTTGATTGGGAAGCAGGAGGCACAGGTGAGTCCACAGGGAGGTGGCTCCCATGCAGCCAGGCATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR GCA 90 bp | CTACCACTGGGGGCTCAGCCTGTGACAAGGGCTTCTGACAATGCTTaGCACTCAGGTGGGAAGGTGACCTGCTCAGGAACCACCTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: LPLGAQPVTRASDNA*HSGGKVTCSGTTFE Trigger: TTCAAAGGTGGTTCCTGAGCAGGTCACCTTCCCACCTGAGTGGCAAGCATTGTCAGAAGCCCTTGTCACAGGCTGAGCCCCCAGTGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | GTGGGGTGTTCTCAGTCAAAATGGACCCAGGTTTACTCTGAGCTCTaGACTCTGGCCACCCTGACTCTTCATGCCTGGCTGCATGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: VGCSQSKWTQVYSEL*TLATLTLHAWLHGS Trigger: GCTCCCATGCAGCCAGGCATGAAGAGTCAGGGTGGCCAGAGTCCAGAGCTCAGAGTAAACCTGGGTCCATTTTGACTGAGAACACCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | CACAGACCCAGAGCTACAACCTTAAACACAGGAAGGGATGCCTGGTaGTGGGAGAGCATGCCTTTAATCCCAGCACCCAGGAGGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HRPRATTLNTGRDAW*WESMPLIPAPRRQR Trigger: CCTCTGCCTCCTGGGTGCTGGGATTAAAGGCATGCTCTCCCACCACCAGGCATCCCTTCCTGTGTTTAAGGTTGTAGCTCTGGGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | CAGCACCCAGGAGGCAGAGGTTTGAGGCCAGGCTGGGCTACAGAGTaGATTCCAGGGCAGAAAGAGCTGCACAGAGAATCATGCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: QHPGGRGLRPGWATE*IPGQKELHRESCLK Trigger: TTTAAGGCATGATTCTCTGTGCAGCTCTTTCTGCCCTGGAATTCACTCTGTAGCCCAGCCTGGCCTCAAACCTCTGCCTCCTGGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | AGACCCAGAGCTACAACCTTAAACACAGGAAGGGATGCCTGGTGGTaGGAGAGCATGCCTTTAATCCCAGCACCCAGGAGGCAGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: RPRATTLNTGRDAWW*ESMPLIPAPRRQRF Trigger: AAACCTCTGCCTCCTGGGTGCTGGGATTAAAGGCATGCTCTCCCACCACCAGGCATCCCTTCCTGTGTTTAAGGTTGTAGCTCTGGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | AATACCACTGTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTaGAAAAGCTGGGATGCGTGGCTTAGATGTGGCATGTCACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: NTTVSFSKILLGGPG*KSWDAWLRCGMSLR Trigger: CCTGAGTGACATGCCACATCTAAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGACAGTGGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | TCAGTTATTTCACAAAGCCCTCCACCAAGGAACGTAACTTACAGCTaGAGAGAAACCGTGGCAACCAAGACAGCAGGTCGGAGCCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: SVISQSPPPRNVTYS*RETVATKTAGRSLY Trigger: GTAGAGGCTCCGACCTGCTGTCTTGGTTGCCACGGTTTCTCTTCAGCTGTAAGTTACGTTCCTTGGTGGAGGGCTTTGTGAAATAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | CTTCAGCTCCCTCTCCTCCTGACAGCAAACCATCATCCTCTATGTTaGGCATCAGTCAGTTATTTCACAAAGCCCTCCACCAAGGAACGT | + |
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Preference number: 1 (lower is better) Translates to: LQLPLLLTANHHPLC*ASVSYFTKPSTKER Trigger: ACGTTCCTTGGTGGAGGGCTTTGTGAAATAACTGACTGATGCTCAACATAGAGGATGATGGTTTGCTGTCAGGAGGAGAGGGAGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | AAGAGCACAAATGAGAGACAGGTGAGGACAGAACAAGCCAGAGAATaGGAAGCAGCCGGATTAGAACAGATTGCCAACGGCAGTATGAAG | + |
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Preference number: 1 (lower is better) Translates to: KSTNERQVRTEQARE*EAAGLEQIANGSMK Trigger: CTTCATACTGCCGTTGGCAATCTGTTCTAATCCGGCTGCTTCTCATTCTCTGGCTTGTTCTGTCCTCACCTGTCTCTCATTTGTGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR GCA 90 bp | GACAGAACAAGCCAGAGAATGAGAAGCAGCCGGATTAGAACAGATTaGCAACGGCAGTATGAAGCCAAACAGAGCAATTCAGAAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: DRTSQRMRSSRIRTD*QRQYEAKQSNSEKA Trigger: AGCCTTTTCTGAATTGCTCTGTTTGGCTTCATACTGCCGTTGGCAATCTGTTCTAATCCGGCTGCTTCTCATTCTCTGGCTTGTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 90 bp | AGTTATCTCAGCAAAGGCTCAGCATTAGGCAGCCAGCTGCTCAATTaGCTGACGGGTAGTCTTTGCAGTCTCTTCAAACTCTTTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SYLSKGSALGSQLLN*LTGSLCSLFKLFLL Trigger: AAGCAAAAAGAGTTTGAAGAGACTGCAAAGACTACCCGTCAGTCAATTGAGCAGCTGGCTGCCTAATGCTGAGCCTTTGCTGAGATAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | CTGAAGAGAAAAGCCAGATTGAATCAGTCAGCTTGGAGAAGAGTTTaGGTCAGAACAGCTGAGTTGAACCAGTCAGTTAGAGCCCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LKRKARLNQSAWRRV*VRTAELNQSVRAQK Trigger: TTTCTGGGCTCTAACTGACTGGTTCAACTCAGCTGTTCTGACCCAAACTCTTCTCCAAGCTGACTGATTCAATCTGGCTTTTCTCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | ATTCAGAAAAGGCTGAAGAGAAAAGCCAGATTGAATCAGTCAGCTTaGAGAAGAGTTTGGGTCAGAACAGCTGAGTTGAACCAGTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: IQKRLKRKARLNQSA*RRVWVRTAELNQSV Trigger: AACTGACTGGTTCAACTCAGCTGTTCTGACCCAAACTCTTCTCCAAGCTGACTGATTCAATCTGGCTTTTCTCTTCAGCCTTTTCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | CAGGACAAAATTATCAGCACAAACACATATAACCACACTTACCCATaGGCTGCATTAGCAGCCCTGTATGGAAATATCACAATCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: QDKIISTNTYNHTYP*AALAALYGNITIRT Trigger: GGTTCTGATTGTGATATTTCCATACAGGGCTGCTAATGCAGCCCATGGGTAAGTGTGGTTATATGTGTTTGTGCTGATAATTTTGTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
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| 3UTR CCA 90 bp | ACTTCAGATAAACGAACAATTGCAGTGAATAACCAATGCAAAATGTaGGGTGTTCTCAGTCAAAATGGACCCAGGTTTACTCTGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: TSDKRTIAVNNQCKM*GVLSQNGPRFTLSS Trigger: AGAGCTCAGAGTAAACCTGGGTCCATTTTGACTGAGAACACCCCACATTTTGCATTGGTTATTCACTGCAATTGTTCGTTTATCTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR CCA 90 bp | GATGCCTGGTGGTGGGAGAGCATGCCTTTAATCCCAGCACCCAGGAGGCAGAGGCTGACTCTTCATGCCTaGCTGCATGGGAGCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: DAWWWESMPLIPAPRRQRLTLHA*LHGSHL Trigger: GAGGTGGCTCCCATGCAGCCAGGCATGAAGAGTCAG...CCTCTGCCTCCTGGGTGCTGGGATTAAAGGCATGCTCTCCCACCACCAGGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CAA 90 bp | ATGAACAGACACGAAGGGGCTGGGGTGTGGCCCAGAGGGCCAGGCTaGCCTGTCCAGGGTGAGATGCTAGTTTCATCACCATCGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: MNRHEGAGVWPRGPG*PVQGEMLVSSPSWQ Trigger: TTGCCACGATGGTGATGAAACTAGCATCTCACCCTGGACAGGCAAGCCTGGCCCTCTGGGCCACACCCCAGCCCCTTCGTGTCTGTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | GATGCCTGGTGGTGGGAGAGCATGCCTTTAATCCCAGCACCCAGGAGGCAGAGGAGCTCCCTCTCCTCCTaGCAGCAAACCATCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: DAWWWESMPLIPAPRRQRSSLSS*QQTIIL Trigger: GAGGATGATGGTTTGCTGTCAGGAGGAGAGGGAGCT...CCTCTGCCTCCTGGGTGCTGGGATTAAAGGCATGCTCTCCCACCACCAGGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGCACCCTGACTCTTCATaGCTGGCTGCATGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VSFSKILLGGPGWKSWDAHPDSS*LAAWEP Trigger: TGGCTCCCATGCAGCCAGGCATGAAGAGTCAGGGTG...CGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | GTAGGATCTCCACAGACCCAGAGCTACAACCTTAAACACAGGAAGGGATGCCTGCAGGAGGCAGAGGTTTaGGGCCAGGCTGGGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: VGSPQTQSYNLKHRKGCLQEAEV*GQAGLQ Trigger: CTGTAGCCCAGCCTGGCCTCAAACCTCTGCCTCCTG...CAGGCATCCCTTCCTGTGTTTAAGGTTGTAGCTCTGGGTCTGTGGAGATCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | CAAAATACCACTGTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAGGACTCTGGCCACCCTaGCTCTTCATGCCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QNTTVSFSKILLGGPGWKGLWPP*LFMPGC Trigger: GCAGCCAGGCATGAAGAGTCAGGGTGGCCAGAGTCC...TTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGACAGTGGTATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGGCCGTCTTACTAGCACAGCTGTGCGCAGACAGACTGAAGAGCACAAATTCGAGGGTAACAGATaGGCACCCAGGCTGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RGGRLTSTAVRRQTEEHKFEGNR*APRLPA Trigger: AGCAGGCAGCCTGGGTGCTCATCTGTTACCCTCGAA...TTTGTGCTCTTCAGTCTGTCTGCGCACAGCTGTGCTAGTAAGACGGCCTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAATACTCTCTGCCATGTCCCCAAGCCTCTACCTATACCAGTGCTACCACTGCTTGCCACTCAGGTaGGAAGGTGACCTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: QPILSAMSPSLYLYQCYHCLPLR*EGDLLR Trigger: CCTGAGCAGGTCACCTTCCCACCTGAGTGGCAAGCA...GTGGTAGCACTGGTATAGGTAGAGGCTTGGGGACATGGCAGAGAGTATTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGGCCGTCTTACTAGCACAGCTGTGCGCAGACAGACTGAAGAGCACAAACTCTACCTATACCAGTaGTACCACTGGGGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RGGRLTSTAVRRQTEEHKLYLYQ*YHWGLS Trigger: GCTGAGCCCCCAGTGGTAGCACTGGTATAGGTAGAG...TTTGTGCTCTTCAGTCTGTCTGCGCACAGCTGTGCTAGTAAGACGGCCTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | GTAGGATCTCCACAGACCCAGAGCTACAACCTTAAACACAGGAAGGGATGCCTGCTTGGGAGAGGGGTCTaGGTCTGGATAGATGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VGSPQTQSYNLKHRKGCLLGRGV*VWIDGS Trigger: AGAACCATCTATCCAGACTCAGACCCCTCTCCCAAG...CAGGCATCCCTTCCTGTGTTTAAGGTTGTAGCTCTGGGTCTGTGGAGATCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGGCCGTCTTACTAGCACAGCTGTGCGCAGACAGACTGAAGAGCACAAAGCTTGGAGAAGAGTTTaGGTCAGAACAGCTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: RGGRLTSTAVRRQTEEHKAWRRV*VRTAEL Trigger: CAACTCAGCTGTTCTGACCCAAACTCTTCTCCAAGC...TTTGTGCTCTTCAGTCTGTCTGCGCACAGCTGTGCTAGTAAGACGGCCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR GCA 90 bp | CAAAATACCACTGTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAATTACTAGCACAGCTGTaGGCAGACAGACTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QNTTVSFSKILLGGPGWKLLAQL*ADRLKS Trigger: GCTCTTCAGTCTGTCTGCGCACAGCTGTGCTAGTAA...TTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGACAGTGGTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | TCATCACTTCCTTATTGCTTAAGTCCACGTCACAATAGAGCAAAGCCACAAAACCTCAGGAACCACCTTTaGAGCACCCTTCCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSLPYCLSPRHNRAKPQNLRNHL*STLPEQ Trigger: CTGCTCAGGAAGGGTGCTTCAAAGGTGGTTCCTGAG...GTTTTGTGGCTTTGCTCTATTGTGACGTGGACTTAAGCAATAAGGAAGTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTGCTTGTTGTTGGTCTCCTTTGCCTGGAATGATGAACAGACACGAAGGGACCCATGCTTGCAAGTaGTGTCTAATTGAGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LFACCWSPLPGMMNRHEGTHACK*CLIEWQ Trigger: CTGCCACTCAATTAGACATCACTTGCAAGCATGGGT...CCCTTCGTGTCTGTTCATCATTCCAGGCAAAGGAGACCAACAACAAGCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAACACTGTCCCTTCATCACTTCCTTATTGCTTAAGTCCACGTCACAATAGAGCTTCTGACAATGCTTaGCACTCAGGTGGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ENTVPSSLPYCLSPRHNRASDNA*HSGGKV Trigger: CACCTTCCCACCTGAGTGGCAAGCATTGTCAGAAGC...TCTATTGTGACGTGGACTTAAGCAATAAGGAAGTGATGAAGGGACAGTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCAGTAAGCCTGTGAGACAATTATTACAGAAGAATAAAAGTTACTTTCACCTCTTCATGCCTGGCTaGATGGGAGCCACCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RGSKPVRQLLQKNKSYFHLFMPG*MGATSL Trigger: CAGGGAGGTGGCTCCCATGCAGCCAGGCATGAAGAG...GTGAAAGTAACTTTTATTCTTCTGTAATAATTGTCTCACAGGCTTACTGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CAA 90 bp | TTGAATCAGTCAGCTTGGAGAAGAGTTTGGGTCAGAACAGCTGAGTaGAACCAGTCAGTTAGAGCCCAGAAAGAACTAGAAAGTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LNQSAWRRVWVRTAE*NQSVRAQKELESVS Trigger: ACTCACACTTTCTAGTTCTTTCTGGGCTCTAACTGACTGGTTCAACTCAGCTGTTCTGACCCAAACTCTTCTCCAAGCTGACTGATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCAGTAAGCCTGTGAGACAATTATTACAGAAGAATAAAAGTTACTTTCACGGAAGGGATGCCTGGTaGTGGGAGAGCATGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RGSKPVRQLLQKNKSYFHGRDAW*WESMPL Trigger: TAAAGGCATGCTCTCCCACCACCAGGCATCCCTTCC...GTGAAAGTAACTTTTATTCTTCTGTAATAATTGTCTCACAGGCTTACTGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTGCTTGTTGTTGGTCTCCTTTGCCTGGAATGATGAACAGACACGAAGGGCATCATCCTCTATGTTaGGCATCAGTCAGTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: LFACCWSPLPGMMNRHEGHHPLC*ASVSYF Trigger: GAAATAACTGACTGATGCTCAACATAGAGGATGATG...CCCTTCGTGTCTGTTCATCATTCCAGGCAAAGGAGACCAACAACAAGCAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCAGTAAGCCTGTGAGACAATTATTACAGAAGAATAAAAGTTACTTTCACCTCACCTGTGCCTCCTaGTTCCCAATCAACTTCACG | + |
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Preference number: 2 (lower is better) Translates to: RGSKPVRQLLQKNKSYFHLTCAS*FPINFT Trigger: CGTGAAGTTGATTGGGAAGCAGGAGGCACAGGTGAG...GTGAAAGTAACTTTTATTCTTCTGTAATAATTGTCTCACAGGCTTACTGCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 72 bp | CCTGGAATGATGAACAGACACGAAGGGGCTGGGGTGTaGCCCAGAGGGCCAGGCTTGCCTGTCCAGGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PGMMNRHEGAGV*PRGPGLPVQGE Trigger: CTCACCCTGGACAGGCAAGCCTGGCCCTCTGGGCCACACCCCAGCCCCTTCGTGTCTGTTCATCATTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 72 bp | CCCAGGTTTACTCTGAGCTCTGGACTCTGGCCACCCTaGCTCTTCATGCCTGGCTGCATGGGAGCCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: PRFTLSSGLWPP*LFMPGCMGATS Trigger: GGAGGTGGCTCCCATGCAGCCAGGCATGAAGAGTCAGGGTGGCCAGAGTCCAGAGCTCAGAGTAAACCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 72 bp | TCCTTTGCCTGGAATGATGAACAGACACGAAGGGGCTaGGGTGTGGCCCAGAGGGCCAGGCTTGCCTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: SFAWNDEQTRRG*GVAQRARLACP Trigger: TGGACAGGCAAGCCTGGCCCTCTGGGCCACACCCCAGCCCCTTCGTGTCTGTTCATCATTCCAGGCAAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 72 bp | CTCTTCATGCCTGGCTGCATGGGAGCCACCTCCCTGTaGACTCACCTGTGCCTCCTGCTTCCCAATCAACTT | + |
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Preference number: 3 (lower is better) Translates to: LFMPGCMGATSL*THLCLLLPNQL Trigger: AAGTTGATTGGGAAGCAGGAGGCACAGGTGAGTCCACAGGGAGGTGGCTCCCATGCAGCCAGGCATGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR TCA 72 bp | TATAAGAGGGACTTGAGCAGCAGGACCCACCTCACCTaGCCATCCCCAGAGTGTCTGAGCACGCTGACCAAA | + |
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Preference number: 3 (lower is better) Translates to: YKRDLSSRTHLT*PSPECLSTLTK Trigger: TTTGGTCAGCGTGCTCAGACACTCTGGGGATGGTCAGGTGAGGTGGGTCCTGCTGCTCAAGTCCCTCTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR GCA 72 bp | TCTGACAATGCTTGCCACTCAGGTGGGAAGGTGACCTaGTCAGGAACCACCTTTGAAGCACCCTTCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: SDNACHSGGKVT*SGTTFEAPFLS Trigger: GCTCAGGAAGGGTGCTTCAAAGGTGGTTCCTGAGCAGGTCACCTTCCCACCTGAGTGGCAAGCATTGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
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| 3UTR CCA 72 bp | CTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTaGCTTAGATGTGGCATGTCACTCAGGTCCAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLGGPGWKSWDA*LRCGMSLRSKL Trigger: TAACTTGGACCTGAGTGACATGCCACATCTAAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | TCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTaGGATGCGTGGCTTAGATGTGGCATGTCACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKILLGGPGWKS*DAWLRCGMSLR Trigger: CCTGAGTGACATGCCACATCTAAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | GTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTaGAAAAGCTGGGATGCGTGGCTTAGATGTGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: VSFSKILLGGPG*KSWDAWLRCGM Trigger: CATGCCACATCTAAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR GCA 72 bp | CCTGTCTGCTCAGTGTCCCCTTCAGCCAATACTCTCTaGCATGTCCCCAAGCCTCTACCTATACCAGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PVCSVSPSANTL*HVPKPLPIPVL Trigger: TAGCACTGGTATAGGTAGAGGCTTGGGGACATGGCAGAGAGTATTGGCTGAAGGGGACACTGAGCAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR GCA 72 bp | CAGACCCAGAGCTACAACCTTAAACACAGGAAGGGATaGCTGGTGGTGGGAGAGCATGCCTTTAATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QTQSYNLKHRKG*LVVGEHAFNPS Trigger: GCTGGGATTAAAGGCATGCTCTCCCACCACCAGGCATCCCTTCCTGTGTTTAAGGTTGTAGCTCTGGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | TCTCAGTCAAAATGGACCCAGGTTTACTCTGAGCTCTaGACTCTGGCCACCCTGACTCTTCATGCCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQSKWTQVYSEL*TLATLTLHAWL Trigger: CAGCCAGGCATGAAGAGTCAGGGTGGCCAGAGTCCAGAGCTCAGAGTAAACCTGGGTCCATTTTGACTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR TCA 72 bp | TCACAAAGCCCTCCACCAAGGAACGTAACTTACAGCTaGAGAGAAACCGTGGCAACCAAGACAGCAGGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SQSPPPRNVTYS*RETVATKTAGR Trigger: CCGACCTGCTGTCTTGGTTGCCACGGTTTCTCTTCAGCTGTAAGTTACGTTCCTTGGTGGAGGGCTTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR GCA 72 bp | CAGAAAAGAGAGGAGGCCGTCTTACTAGCACAGCTGTaGGCAGACAGACTGAAGAGCACAAATGAGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QKREEAVLLAQL*ADRLKSTNERQ Trigger: CTGTCTCTCATTTGTGCTCTTCAGTCTGTCTGCGCACAGCTGTGCTAGTAAGACGGCCTCCTCTCTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR TCA 72 bp | AGCAAAGGCTCAGCATTAGGCAGCCAGCTGCTCAATTaGCTGACGGGTAGTCTTTGCAGTCTCTTCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SKGSALGSQLLN*LTGSLCSLFKL Trigger: GAGTTTGAAGAGACTGCAAAGACTACCCGTCAGTCAATTGAGCAGCTGGCTGCCTAATGCTGAGCCTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR TCA 72 bp | CCTCTCCTCCTGACAGCAAACCATCATCCTCTATGTTaGGCATCAGTCAGTTATTTCACAAAGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PLLLTANHHPLC*ASVSYFTKPST Trigger: GGTGGAGGGCTTTGTGAAATAACTGACTGATGCTCAACATAGAGGATGATGGTTTGCTGTCAGGAGGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | CCACACTTACCCATGGGCTGCATTAGCAGCCCTGTATaGAAATATCACAATCAGAACCAAGACCTTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PHLPMGCISSPV*KYHNQNQDLAQ Trigger: CTGTGCAAGGTCTTGGTTCTGATTGTGATATTTCCATACAGGGCTGCTAATGCAGCCCATGGGTAAGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR GCA 72 bp | CTGTCAGAGAACACTGTCCCTTCATCACTTCCTTATTaGTTAAGTCCACGTCACAATAGAGCAAAGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSENTVPSSLPY*LSPRHNRAKPQ Trigger: TTGTGGCTTTGCTCTATTGTGACGTGGACTTAAGCAATAAGGAAGTGATGAAGGGACAGTGTTCTCTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | AAAGCCAGATTGAATCAGTCAGCTTGGAGAAGAGTTTaGGTCAGAACAGCTGAGTTGAACCAGTCAGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KARLNQSAWRRV*VRTAELNQSVR Trigger: TCTAACTGACTGGTTCAACTCAGCTGTTCTGACCCAAACTCTTCTCCAAGCTGACTGATTCAATCTGGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR TCA 72 bp | CCAGAAAGAACTAGAAAGTGTGAGTTTACTCAGCAGTaGGTCTCAGAGGCTGAAAACATTCTAGACCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PERTRKCEFTQQ*VSEAENILDLD Trigger: ATCTAGGTCTAGAATGTTTTCAGCCTCTGAGACTCACTGCTGAGTAAACTCACACTTTCTAGTTCTTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | ATTATCAGCACAAACACATATAACCACACTTACCCATaGGCTGCATTAGCAGCCCTGTATGGAAATATCACA | + |
|
Preference number: 3 (lower is better) Translates to: IISTNTYNHTYP*AALAALYGNIT Trigger: TGTGATATTTCCATACAGGGCTGCTAATGCAGCCCATGGGTAAGTGTGGTTATATGTGTTTGTGCTGATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR CCA 72 bp | AAACGAACAATTGCAGTGAATAACCAATGCAAAATGTaGGGTGTTCTCAGTCAAAATGGACCCAGGTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: KRTIAVNNQCKM*GVLSQNGPRFT Trigger: AGTAAACCTGGGTCCATTTTGACTGAGAACACCCCACATTTTGCATTGGTTATTCACTGCAATTGTTCGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR TCA 72 bp | CTTAGAGTTGAACTTCAGATAAACGAACAATTGCAGTaGATAACCAATGCAAAATGTGGGGTGTTCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRVELQINEQLQ*ITNAKCGVFSV Trigger: GACTGAGAACACCCCACATTTTGCATTGGTTATTCACTGCAATTGTTCGTTTATCTGAAGTTCAACTCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| CDS-3UTR GCA 90 bp | GGCACCCCGACCCCCACAGGTCCTGTCAGAGAACACTGTCCCTTCATCACTTCCGCGCAGCCAGGGGAGTaGTTTCTATGCTCCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GTPTPTGPVREHCPFITSAQPGE*FLCSSI Trigger: GATAGAGGAGCATAGAAAGCACTCCCCTGGCTGCGC...GGAAGTGATGAAGGGACAGTGTTCTCTGACAGGACCTGTGGGGGTCGGGGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTGGCTTAGATGTGGCATGTCAGGAAGGGCCAGTTCTTaGAGGTGGCGATGCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGGPGWKSWDAWLRCGMSGRASS*RWRCGS Trigger: ACTACCGCATCGCCACCTTCAAGAACTGGCCCTTCC...TGACATGCCACATCTAAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR TCA 90 bp | GTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGGGAAGGGCCAGTTCTTaGAGGTGGCGATGCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSFSKILLGGPGWKSWDAGRASS*RWRCGS Trigger: ACTACCGCATCGCCACCTTCAAGAACTGGCCCTTCC...CGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTGGCTTTTCTCGGTAGGGCAGTaGATGAAGCCAGCCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKILLGGPGWKSWDAWLFSVGQ*MKPASA Trigger: GGCGGAGGCTGGCTTCATCCACTGCCCTACCGAGAA...AAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTGGCTTTTCTTGAGGTACAGCTaGCAGATCTGGGGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKILLGGPGWKSWDAWLFLRYS*QIWGSA Trigger: GGCGCTGCCCCAGATCTGGCAGCTGTACCTCAAGAA...AAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR GCA 90 bp | GTAGGATCTCCACAGACCCAGAGCTACAACCTTAAACACAGGAAGGGATGCCTGTTCTTGAGGTACAGCTaGCAGATCTGGGGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGSPQTQSYNLKHRKGCLFLRYS*QIWGSA Trigger: GGCGCTGCCCCAGATCTGGCAGCTGTACCTCAAGAA...CAGGCATCCCTTCCTGTGTTTAAGGTTGTAGCTCTGGGTCTGTGGAGATCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| CDS-3UTR GCA 90 bp | CCCGACCCCCACAGGTCCTGTCAGAGAACACTGTCCCTTCATCACTTCCTTATTGCGCAGCCAGGGGAGTaGTTTCTATGCTCCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PDPHRSCQRTLSLHHFLIAQPGE*FLCSSI Trigger: GATAGAGGAGCATAGAAAGCACTCCCCTGGCTGCGC...AATAAGGAAGTGATGAAGGGACAGTGTTCTCTGACAGGACCTGTGGGGGTCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR CCA 90 bp | CAAAATACCACTGTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAATTCTCGGTAGGGCAGTaGATGAAGCCAGCCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNTTVSFSKILLGGPGWKFSVGQ*MKPASA Trigger: GGCGGAGGCTGGCTTCATCCACTGCCCTACCGAGAA...TTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGACAGTGGTATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTGGCTTCTGACGGGTAGTCTTTaGAGTCTCTTCAAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSKILLGGPGWKSWDAWLLTGSL*SLFKLF Trigger: AAAGAGTTTGAAGAGACTGCAAAGACTACCCGTCAG...AAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081387.11 |
||
| 3UTR CAA 72 bp | CCCTCTCCTCCTGACAGCAAACCATCATCCTCTATGTaGAGCATCAGTCAGTTATTTCACAAAGCCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPPDSKPSSSM*SISQLFHKALH Trigger: GTGGAGGGCTTTGTGAAATAACTGACTGATGCTCAACATAGAGGATGATGGTTTGCTGTCAGGAGGAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR CAA 72 bp | TCTCTTCAAACTCTTTTTGCTTGTTGTTGGTCTCCTTaGCCTGGAATGATGAACAGACACGAAGGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQTLFACCWSP*PGMMNRHEGAG Trigger: CCCAGCCCCTTCGTGTCTGTTCATCATTCCAGGCAAAGGAGACCAACAACAAGCAAAAAGAGTTTGAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| CDS-3UTR GCA 90 bp | ATCAGCACAAACACATATAACCACACTTACCCATGGGCTGCATTAGCAGCCCTGGTTAGTTCTTCCATCTaGTTCTTGACAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISTNTYNHTYPWAALAALVSSSI*FLTVRK Trigger: CTTCCTCACTGTCAAGAAGCAGATGGAAGAACTAAC...CAGGGCTGCTAATGCAGCCCATGGGTAAGTGTGGTTATATGTGTTTGTGCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| 3UTR CAA 72 bp | TCAGCTTGGAGAAGAGTTTGGGTCAGAACAGCTGAGTaGAACCAGTCAGTTAGAGCCCAGAAAGAACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAWRRVWVRTAE*NQSVRAQKELE Trigger: TTCTAGTTCTTTCTGGGCTCTAACTGACTGGTTCAACTCAGCTGTTCTGACCCAAACTCTTCTCCAAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| 3UTR CAA 72 bp | CGGGTAGTCTTTGCAGTCTCTTCAAACTCTTTTTGCTaGTTGTTGGTCTCCTTTGCCTGGAATGATGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVVFAVSSNSFC*LLVSFAWNDEQ Trigger: CTGTTCATCATTCCAGGCAAAGGAGACCAACAACAAGCAAAAAGAGTTTGAAGAGACTGCAAAGACTACCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| CDS GCA 90 bp | TCTTCCATCTGCTTCTTGACAGTGAGGAAGGCGCAGCCAGGGGAGTaGTTTCTATGCTCCTCTATCGGGTTGTCATCGGGTTCCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSICFLTVRKAQPGE*FLCSSIGLSSGSQP Trigger: AGGCTGGGAACCCGATGACAACCCGATAGAGGAGCATAGAAAGCACTCCCCTGGCTGCGCCTTCCTCACTGTCAAGAAGCAGATGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTGGCTTTCTTCCATCTGCTTCTaGACAGTGAGGAAGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSKILLGGPGWKSWDAWLSSICF*TVRKAQ Trigger: CTGCGCCTTCCTCACTGTCAAGAAGCAGATGGAAGA...AAGCCACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR CAA 90 bp | ACCCCGACCCCCACAGGTCCTGTCAGAGAACACTGTCCCTTCATCACTTCCTTATCTTCCATCTGCTTCTaGACAGTGAGGAAGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPTPTGPVREHCPFITSLSSICF*TVRKAQ Trigger: CTGCGCCTTCCTCACTGTCAAGAAGCAGATGGAAGA...TAAGGAAGTGATGAAGGGACAGTGTTCTCTGACAGGACCTGTGGGGGTCGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATGCGTGTTGTTGGTCTCCTTaGCAATTTTGTTCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSFSKILLGGPGWKSWDACCWSP*QFCSWL Trigger: GAGCCAAGAACAAAATTGCAAAGGAGACCAACAACA...CGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081387.11 |
||
| CDS GCA 90 bp | TGTCTGTCCAGTTTCAAGAATTCACTGACGGTTAGTTCTTCCATCTaGTTCTTGACAGTGAGGAAGGCGCAGCCAGGGGAGTGCTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLSSFKNSLTVSSSI*FLTVRKAQPGECFL Trigger: TAGAAAGCACTCCCCTGGCTGCGCCTTCCTCACTGTCAAGAAGCAGATGGAAGAACTAACCGTCAGTGAATTCTTGAAACTGGACAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTCCTTCTCTAAGATCCTGCTAGGAGGCCCTGGCTGGAAAAGCTGGGATCATACAATTTTGTTCTaGGCTCTCTGTCTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVSFSKILLGGPGWKSWDHTILF*ALCLSS Trigger: ACTGGACAGACAGAGAGCCAAGAACAAAATTGTATG...ATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAAGGAGACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093906.5 |
||
| CDS-3UTR CAA 90 bp | CCCACAGGTCCTGTCAGAGAACACTGTCCCTTCATCACTTCCTTATTGCTTAAGGTCTCCTTTGCAATTTaGTTCTTGGCTCTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTGPVREHCPFITSLLLKVSFAI*FLALCL Trigger: CAGACAGAGAGCCAAGAACAAAATTGCAAAGGAGAC...CTTAAGCAATAAGGAAGTGATGAAGGGACAGTGTTCTCTGACAGGACCTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081387.11 |
||
| CDS-3UTR CAA 90 bp | CCCCCACAGGTCCTGTCAGAGAACACTGTCCCTTCATCACTTCCTTATTGCTTAAACTCTTTTTGCTTGTaGTTGGTCTCCTTTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: PPQVLSENTVPSSLPYCLNSFCL*LVSFAI Trigger: AATTGCAAAGGAGACCAACAACAAGCAAAAAGAGTT...TAAGCAATAAGGAAGTGATGAAGGGACAGTGTTCTCTGACAGGACCTGTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081387.11 |
||
| CDS-3UTR CAA 90 bp | CCCACAGGTCCTGTCAGAGAACACTGTCCCTTCATCACTTCCTTATTGCTTAAGTCTTTTTGCTTGTTGTaGGTCTCCTTTGCAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTGPVREHCPFITSLLLKSFCLL*VSFAIL Trigger: CAAAATTGCAAAGGAGACCAACAACAAGCAAAAAGA...CTTAAGCAATAAGGAAGTGATGAAGGGACAGTGTTCTCTGACAGGACCTGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081387.11 |
||
| CDS CCA 72 bp | CACTGGGCCAAATCAGGCTCGTTCTCGGTAGGGCAGTaGATGAAGCCAGCCTCCGCCATTCGCTCTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HWAKSGSFSVGQ*MKPASAIRSGV Trigger: CACCCCAGAGCGAATGGCGGAGGCTGGCTTCATCCACTGCCCTACCGAGAACGAGCCTGATTTGGCCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS GCA 72 bp | ACAGTGAGGAAGGCGCAGCCAGGGGAGTGCTTTCTATaGTCCTCTATCGGGTTGTCATCGGGTTCCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TVRKAQPGECFL*SSIGLSSGSQP Trigger: AGGCTGGGAACCCGATGACAACCCGATAGAGGAGCATAGAAAGCACTCCCCTGGCTGCGCCTTCCTCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS GCA 72 bp | TGCTTCTTGACAGTGAGGAAGGCGCAGCCAGGGGAGTaGTTTCTATGCTCCTCTATCGGGTTGTCATCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CFLTVRKAQPGE*FLCSSIGLSSG Trigger: ACCCGATGACAACCCGATAGAGGAGCATAGAAAGCACTCCCCTGGCTGCGCCTTCCTCACTGTCAAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS CAA 72 bp | CAGCCAGGGGAGTGCTTTCTATGCTCCTCTATCGGGTaGTCATCGGGTTCCCAGCCTTCCAATTCCTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPGECFLCSSIG*SSGSQPSNSLK Trigger: CTTTAAGGAATTGGAAGGCTGGGAACCCGATGACAACCCGATAGAGGAGCATAGAAAGCACTCCCCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS GCA 72 bp | AGTTTCAAGAATTCACTGACGGTTAGTTCTTCCATCTaGTTCTTGACAGTGAGGAAGGCGCAGCCAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFKNSLTVSSSI*FLTVRKAQPGE Trigger: CTCCCCTGGCTGCGCCTTCCTCACTGTCAAGAAGCAGATGGAAGAACTAACCGTCAGTGAATTCTTGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081387.11 ENSMUST00000093906.5 |
||
| CDS CAA 72 bp | GTAGTCTTTGCAGTCTCTTCAAACTCTTTTTGCTTGTaGTTGGTCTCCTTTGCAATTTTGTTCTTGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVFAVSSNSFCL*LVSFAILFLAL Trigger: GAGAGCCAAGAACAAAATTGCAAAGGAGACCAACAACAAGCAAAAAGAGTTTGAAGAGACTGCAAAGACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081387.11 |
||