Pregenerated sensors for BIRC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032000Ensembl transcript IDs: ENSMUST00000013949.15, ENSMUST00000115672.2, ENSMUST00000115673.3, ENSMUST00000159323.2, ENSMUST00000161642.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAAAAGTTTTTCATGTTTATATTTGTGTGTTTGGCGGTGTCTCGTaGTATCCAGGCTGGCCTCAAGTTCCGAATGGAGCTGGGAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: TKVFHVYICVFGGVS*YPGWPQVPNGAGSD Trigger: GTCACTCCCAGCTCCATTCGGAACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACATGAAAAACTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| 3UTR-3UTR CCA 90 bp | ATCCAGGCTGGCCACTCACTGTATAACCCCGGCTGGCTAGGAATGTATGACCCTAGATGCCCACTGCTATaGGGTGGAGCTAGGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: IQAGHSLYNPGWLGMYDPRCPLL*GGARER Trigger: TCTTTCCCTAGCTCCACCCCATAGCAGTGGGCATCT...AGGGTCATACATTCCTAGCCAGCCGGGGTTATACAGTGAGTGGCCAGCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCCTCGACCATGTGAGTCCAGGGGCTACAACCTGGGCTGAGTCATCTGCCAGAGAGATGACTCAGTaGTTAAGGGTACTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: FPLDHVSPGATTWAESSAREMTQ*LRVLTA Trigger: AGCAGTCAGTACCCTTAACCACTGAGTCATCTCTCT...GGCAGATGACTCAGCCCAGGTTGTAGCCCCTGGACTCACATGGTCGAGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR TCA 90 bp | CTCGACCATGTGAGTCCAGGGGCTACAACCTGGGCTGAGTCATCTGCCAACCTTATCTGTAATGAGATCTaGTGCCCTCTTTTGGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LDHVSPGATTWAESSANLICNEI*CPLLVH Trigger: ATGCACCAAAAGAGGGCATCAGATCTCATTACAGAT...AAGGTTGGCAGATGACTCAGCCCAGGTTGTAGCCCCTGGACTCACATGGTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCATTAATCAACAGGGCCATATaGGCTTATGGGCTAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: DSCLFTFSFRPCSISWALINRAI*AYGLER Trigger: TCTCTCTAGCCCATAAGCCCATATGGCCCTGTTGAT...TAATGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCACTTCTGCTTTCCAAATaGTGGATTACAGCTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: LDSCLFTFSFRPCSISWALLLSK*WITAGL Trigger: GAGTCCAGCTGTAATCCAGCATTTGGAAAGCAGAAG...TGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCATTATCAGCCTTCCACTTCTaGTTTCCAAATGCTGGATTA | + |
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Preference number: 2 (lower is better) Translates to: DSCLFTFSFRPCSISWALSAFHF*FPNAGL Trigger: TAATCCAGCATTTGGAAAGCAGAAGTGGAAGGCTGA...TAATGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCATTACAGGCAAAACACCAATaGACATACATGAAAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: DSCLFTFSFRPCSISWALQAKHQ*TYMKVN Trigger: GTTTACTTTCATGTATGTGCATTGGTGTTTTGCCTG...TAATGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGAGAAGGAATGTGTGCACTATGGCAAGTACTTAGATTGCTaGCCCTGCCCCAGACAGATG | + |
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Preference number: 2 (lower is better) Translates to: FLSFFLSFFLEKECVHYGKYLDC*PCPRQM Trigger: CATCTGTCTGGGGCAGGGCCAGCAATCTAAGTACTT...GCCATAGTGCACACATTCCTTCTCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGAGAAGGAATGTGTGCACTATGGCCTGCTTTCCAAATGCTaGATTACAGCTGGACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: FLSFFLSFFLEKECVHYGLLSKC*ITAGLS Trigger: GCTGAGTCCAGCTGTAATCCAGCATTTGGAAAGCAG...GCCATAGTGCACACATTCCTTCTCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGAGAAGGAATGTGTGCACTATGGCCCCTGTTCTATTAGCTaGGCATTATCTGTCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: FLSFFLSFFLEKECVHYGPCSIS*ALSVPN Trigger: ATTGGGGACAGATAATGCCCAGCTAATAGAACAGGG...GCCATAGTGCACACATTCCTTCTCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR GCA 72 bp | CTTGAGCACATCAGCCTTCCACTTCTGCTTTCCAAATaGTGGATTACAGCTGGACTCAGCTTCCCTTCAACC | + |
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Preference number: 3 (lower is better) Translates to: LEHISLPLLLSK*WITAGLSFPST Trigger: GGTTGAAGGGAAGCTGAGTCCAGCTGTAATCCAGCATTTGGAAAGCAGAAGTGGAAGGCTGATGTGCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR CCA 72 bp | TTAAATTTCTCCAAGCGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LNFSKRAGEMAQ*LRALTALPKVL Trigger: CAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCGCTTGGAGAAATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR TCA 72 bp | CTTCCAGAGGACCCAGGTTCAATTCCTAGCATTCAGTaGCAGCTCTCAACTGTCTTTAACTCCAGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LPEDPGSIPSIQ*QLSTVFNSSSR Trigger: CCTGGAACTGGAGTTAAAGACAGTTGAGAGCTGTCACTGAATGCTAGGAATTGAACCTGGGTCCTCTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR GCA 72 bp | TTCAATAGGGCCTTGAGCACATCAGCCTTCCACTTCTaGTTTCCAAATGCTGGATTACAGCTGGACTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FNRALSTSAFHF*FPNAGLQLDSA Trigger: AGCTGAGTCCAGCTGTAATCCAGCATTTGGAAAGCAGAAGTGGAAGGCTGATGTGCTCAAGGCCCTATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAATCCTCCTGGCTGAAGTaGCAGCCATGGACCATTAGT | + |
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Preference number: 3 (lower is better) Translates to: IFLRISGVQAIPAFQEQESSWLK*QPWTIS Trigger: ACTAATGGTCCATGGCTGCAACTTCAGCCAGGAGGA...TTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| 3UTR GCA 72 bp | TTTCATGTTTATATTTGTGTGTTTGGCGGTGTCTCGTaGTATCCAGGCTGGCCTCAAGTTCCGAATGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FHVYICVFGGVS*YPGWPQVPNGA Trigger: AGCTCCATTCGGAACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| 3UTR CCA 72 bp | AATGTAGTTTGCTTAAAGTGTAGATGCCCACTGCTATaGGGTGGAGCTAGGGAAAGAGGTTATGATTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: NVVCLKCRCPLL*GGARERGYDWH Trigger: ATGCCAATCATAACCTCTTTCCCTAGCTCCACCCCATAGCAGTGGGCATCTACACTTTAAGCAAACTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR CCA 72 bp | ATCAACAACAAAAATCAACAGGGCCATATGGGCTTATaGGCTAGAGAGATGACTCAGTGGTTAAGGGTACTG | + |
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Preference number: 3 (lower is better) Translates to: INNKNQQGHMGL*AREMTQWLRVL Trigger: CAGTACCCTTAACCACTGAGTCATCTCTCTAGCCCATAAGCCCATATGGCCCTGTTGATTTTTGTTGTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR CCA 72 bp | TTCTTTCTTGAGAAGGAATGTGTGCACTATGGCACGTaGGTAGTCAGAGGACAACTTTCAAGAGTCAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: FFLEKECVHYGT*VVRGQLSRVSF Trigger: AAAGCTGACTCTTGAAAGTTGTCCTCTGACTACCCACGTGCCATAGTGCACACATTCCTTCTCAAGAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAATTTTCATGTTTATATTaGTGTGTTTGGCGGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: IFLRISGVQAIPAFQEQEFSCLY*CVWRCL Trigger: GAGACACCGCCAAACACACAAATATAAACATGAAAA...TTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| 3UTR TCA 72 bp | TTTCTGAACCATAAATGCCAACATTGTAAATCTTTCTaGGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: FLNHKCQHCKSF*EFQECRQSLLF Trigger: GAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAATGTTGGCATTTATGGTTCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| 3UTR TCA 72 bp | ACCCAAGATACACACTTACATACACTGATCAATCTATaGGGCCTGAAGCATAAACTAGATATTTATGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: TQDTHLHTLINL*GLKHKLDIYAV Trigger: AACAGCATAAATATCTAGTTTATGCTTCAGGCCTCATAGATTGATCAGTGTATGTAAGTGTGTATCTTGGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR TCA 90 bp | TTTCCCCTCGACCATGTGAGTCCAGGGGCTACAACCTGGGCTGAGTCATCTGCCCACAGCAGAAGCACTTaGCCTTGTCATTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: FPLDHVSPGATTWAESSAHSRST*PCHWHQ Trigger: CTGGTGCCAATGACAAGGTCAAGTGCTTCTGCTGTG...GGCAGATGACTCAGCCCAGGTTGTAGCCCCTGGACTCACATGGTCGAGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR TCA 90 bp | TTTCCCCTCGACCATGTGAGTCCAGGGGCTACAACCTGGGCTGAGTCATCTGCCGGCCAGCTTTGCTGGTaGCAGAAAAGACAATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPLDHVSPGATTWAESSAGQLCW*QKRQWP Trigger: TGGCCATTGTCTTTTCTGTCACCAGCAAAGCTGGCC...GGCAGATGACTCAGCCCAGGTTGTAGCCCCTGGACTCACATGGTCGAGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR GCA 90 bp | TTTCCCCTCGACCATGTGAGTCCAGGGGCTACAACCTGGGCTGAGTCATCTGCCCCTTACGTTCCCAGTTaGTCAGTTTCCCATCGCACG | + |
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Preference number: 4 (lower is better) Translates to: FPLDHVSPGATTWAESSAPYVPS*SVSHRT Trigger: CGTGCGATGGGAAACTGAGCAACTGGGAACGTAAGG...GGCAGATGACTCAGCCCAGGTTGTAGCCCCTGGACTCACATGGTCGAGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR TCA 90 bp | GCCCCAGACAGATGCTGCCACATTTGGCCTCCTAGAAAGCCTTTTGTGTTCCCCGCAAGTTCCTGGGAATaGACTAGTGCACTAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: APDRCCHIWPPRKPFVFPASSWE*TSALEG Trigger: GCCTTCTAGTGCACTAGTTCATTCCCAGGAACTTGC...GGGGAACACAAAAGGCTTTCTAGGAGGCCAAATGTGGCAGCATCTGTCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR GCA 90 bp | ATCCAGGCTGGCCACTCACTGTATAACCCCGGCTGGCTAGGAATGTATGACCCTGGGTACAACTTTCTGTaGTTCTCCATGGGACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: IQAGHSLYNPGWLGMYDPGYNFL*FSMGLS Trigger: GGACAGTCCCATGGAGAAGCACAGAAAGTTGTACCC...AGGGTCATACATTCCTAGCCAGCCGGGGTTATACAGTGAGTGGCCAGCCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CCA 90 bp | ATCCAGGCTGGCCACTCACTGTATAACCCCGGCTGGCTAGGAATGTATGACCCTTTAAGAACGGACAGCTaGGGAAATGCCTCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: IQAGHSLYNPGWLGMYDPLRTDS*GNASGA Trigger: AGCACCAGAGGCATTTCCCCAGCTGTCCGTTCTTAA...AGGGTCATACATTCCTAGCCAGCCGGGGTTATACAGTGAGTGGCCAGCCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR TCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTAGCCAGACTCCTTTCTaGCACAGGAACTCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSSQTPF*HRNSPG Trigger: CCCAGGGGAGTTCCTGTGTCAGAAAGGAGTCTGGCT...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTGCCGCCTGCTCCATCTaGTCCTCTCTCATCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSAACSI*SSLISS Trigger: AGACGAGATGAGAGAGGAGCAGATGGAGCAGGCGGC...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTAACACAGCCGCCTGCTCCATCTaGTCCTCTCTCATCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: SRREFLNEVAAVFPFANTAACSI*SSLISS Trigger: AGACGAGATGAGAGAGGAGCAGATGGAGCAGGCGGC...TGTGTTAGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS-3UTR TCA 90 bp | GATTTAGACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGAGCCAGACTCCTTTCTaGCACAGGAACTCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DLDSCLFTFSFRPCSISWSQTPF*HRNSPG Trigger: CCCAGGGGAGTTCCTGTGTCAGAAAGGAGTCTGGCT...CCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR TCA 90 bp | GCACATCAGCCTTCCACTTCTGCTTTCCAAATGCTGGATTACAGCTGGACTCAGATGCCTCTGGTGCTCTaGCATAGCATCATCCTTACG | + |
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Preference number: 4 (lower is better) Translates to: AHQPSTSAFQMLDYSWTQMPLVL*HSIILT Trigger: CGTAAGGATGATGCTATGTCAGAGCACCAGAGGCAT...CTGAGTCCAGCTGTAATCCAGCATTTGGAAAGCAGAAGTGGAAGGCTGATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR GCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTAGCTCAAAGGCATGGTaGTCATCGCCGTGGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSSSKAW*SSPWKE Trigger: TTCCTTCCACGGCGATGAGCACCATGCCTTTGAGCT...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTGCCCATTTCCAAGGCTaGTTTAACCACAGGCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSAHFQG*FNHRRA Trigger: AGCACGCCTGTGGTTAAAGCAGCCTTGGAAATGGGC...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | AGAGAGATGACTCAGTGGTTAAGGGTACTGACTGCTCTTCCAGAGGACCCAGGTCACTCTTCATCAGCTTaGCTAGAAAGGCGCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: REMTQWLRVLTALPEDPGHSSSA*LERRCL Trigger: AAGACAGCGCCTTTCTAGCCAAGCTGATGAAGAGTG...ACCTGGGTCCTCTGGAAGAGCAGTCAGTACCCTTAACCACTGAGTCATCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTTGGTCCCTCTACAGATaGGACACTTCCTCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSWSLYR*DTSSER Trigger: CCTCTCTGAGGAAGTGTCCCATCTGTAGAGGGACCA...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR TCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCACAGCAGAAGCACTTaGCCTTGTCATTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSHSRST*PCHWHQ Trigger: CTGGTGCCAATGACAAGGTCAAGTGCTTCTGCTGTG...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTAACACAGCCCATTTCCAAGGCTaGTTTAACCACAGGCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SRREFLNEVAAVFPFANTAHFQG*FNHRRA Trigger: AGCACGCCTGTGGTTAAAGCAGCCTTGGAAATGGGC...TGTGTTAGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS-3UTR GCA 90 bp | CTCGACCATGTGAGTCCAGGGGCTACAACCTGGGCTGAGTCATCTGCCAACCTTATTATACATACTTGCTaGGTCTGCATTCTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LDHVSPGATTWAESSANLIIHTC*VCILIF Trigger: GAAGATGAGAATGCAGACGCAGCAAGTATGTATAAT...AAGGTTGGCAGATGACTCAGCCCAGGTTGTAGCCCCTGGACTCACATGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR GCA 90 bp | TCAATTTCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTTTCAGTGATGGCCCTTaGACTGACTCCTCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SISRREFLNEVAAVFPFAFSDGP*TDSSSS Trigger: CGAGGAGGAGGAGTCAGTGCAAGGGCCATCACTGAA...AGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGAAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS-3UTR CCA 90 bp | AATTTCTCCAAGCGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTGAAAAGCTGAATACGTaGACAATCGGTACAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: NFSKRAGEMAQWLRALTAEKLNT*TIGTAH Trigger: GTGAGCTGTACCGATTGTCCACGTATTCAGCTTTTC...AGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCGCTTGGAGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTTTCTGTGCTTCTCCATaGGACTGTCCCCTTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSFCASP*DCPLVS Trigger: GGAAACAAGGGGACAGTCCCATGGAGAAGCACAGAA...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | AATTTCTCCAAGCGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTGTACAAAGTTGCAGCTaGGGTACAACTTTCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NFSKRAGEMAQWLRALTAVQSCS*GTTFCA Trigger: AGCACAGAAAGTTGTACCCCAGCTGCAACTTTGTAC...AGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCGCTTGGAGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTTTAAGAACGGACAGCTaGGGAAATGCCTCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSLRTDS*GNASGA Trigger: AGCACCAGAGGCATTTCCCCAGCTGTCCGTTCTTAA...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | AATTTCTCCAAGCGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCAAGTACTCACACCTTaGAAACCACTTGGCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NFSKRAGEMAQWLRALTAQVLTP*KPLGMF Trigger: GAACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTG...AGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCGCTTGGAGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR TCA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAATGCCTCTGGTGCTCTaGCATAGCATCATCCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTMPLVL*HSIILT Trigger: CGTAAGGATGATGCTATGTCAGAGCACCAGAGGCAT...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAGGGTACAACTTTCTGTaGTTCTCCATGGGACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTGYNFL*FSMGLS Trigger: GGACAGTCCCATGGAGAAGCACAGAAAGTTGTACCC...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAACACAGGAACTCCCCTaGGAAAAGCTGAATACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTTQELP*EKLNTW Trigger: CCACGTATTCAGCTTTTCCCAGGGGAGTTCCTGTGT...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | ACTGTCTTTAACTCCAGTTCCAGGGGACCTGACACTTCACACAAACATACTAGCTTCTGTGCTTCTCCATaGGACTGTCCCCTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVFNSSSRGPDTSHKHTSFCASP*DCPLVS Trigger: GGAAACAAGGGGACAGTCCCATGGAGAAGCACAGAA...GCTAGTATGTTTGTGTGAAGTGTCAGGTCCCCTGGAACTGGAGTTAAAGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CCA 90 bp | GACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCATTAAGTAGAAGCCTGCTTTaGCCAGCTTTGCTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: DSCLFTFSFRPCSISWALSRSLL*PALLVT Trigger: TGTCACCAGCAAAGCTGGCCAAAGCAGGCTTCTACT...TAATGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTTGTAGTTCTCACCAGTaGCCAGGATCTGCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSCSSHQ*PGSATE Trigger: TTCAGTGGCAGATCCTGGCCACTGGTGAGAACTACA...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR TCA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAGCCATGTTTCATAGGTaGGTAATCTGGCCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTAMFHR*VIWPSL Trigger: CAGAGAAGGCCAGATTACTCACCTATGAAACATGGC...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR TCA 90 bp | ATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAAGGCCAGCTTTGCTGGTaGCAGAAAAGACAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLRISGVQAIPAFQEQEGQLCW*QKRQWP Trigger: TGGCCATTGTCTTTTCTGTCACCAGCAAAGCTGGCC...TTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGAGCACATCAGCCTTCCACTTCTGCTTTCCAAATGCTGGATTACAGCTAAGTCTGTACAAAGTTaGAGCTGGGGTACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLEHISLPLLLSKCWITAKSVQS*SWGTTF Trigger: GAAAGTTGTACCCCAGCTGCAACTTTGTACAGACTT...AGCTGTAATCCAGCATTTGGAAAGCAGAAGTGGAAGGCTGATGTGCTCAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS-3UTR GCA 90 bp | GCACATCAGCCTTCCACTTCTGCTTTCCAAATGCTGGATTACAGCTGGACTCAGCTTCTCTGTGTTCATTaGAAAGTGGTAGGGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHQPSTSAFQMLDYSWTQLLCVH*KVVGTC Trigger: ACAAGTCCCTACCACTTTGCAATGAACACAGAGAAG...CTGAGTCCAGCTGTAATCCAGCATTTGGAAAGCAGAAGTGGAAGGCTGATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS-3UTR CCA 90 bp | TCAATTTCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTTGTAGTTCTCACCAGTaGCCAGGATCTGCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SISRREFLNEVAAVFPFACSSHQ*PGSATE Trigger: TTCAGTGGCAGATCCTGGCCACTGGTGAGAACTACA...AGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| 3UTR CAA 72 bp | ACAGATGCTGCCACATTTGGCCTCCTAGAAAGCCTTTaGTGTTCCCCAGATTTAGACAGTTGTCTCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: TDAATFGLLESL*CSPDLDSCLFT Trigger: CGTGAAGAGACAACTGTCTAAATCTGGGGAACACAAAAGGCTTTCTAGGAGGCCAAATGTGGCAGCATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTAAGTCTGTACAAAGTTaGAGCTGGGGTACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSKSVQS*SWGTTF Trigger: GAAAGTTGTACCCCAGCTGCAACTTTGTACAGACTT...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR GCA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGACCTTACGTTCCCAGTTaGTCAGTTTCCCATCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: IVNLSENFRSAGNPCFSGPYVPS*SVSHRT Trigger: CGTGCGATGGGAAACTGAGCAACTGGGAACGTAAGG...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTGAAAAGCTGAATACGTaGACAATCGGTACAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSEKLNT*TIGTAH Trigger: GTGAGCTGTACCGATTGTCCACGTATTCAGCTTTTC...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAGTACAAAGTTGCAGCTaGGGTACAACTTTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTVQSCS*GTTFCA Trigger: AGCACAGAAAGTTGTACCCCAGCTGCAACTTTGTAC...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACACAAGTACTCACACCTTaGAAACCACTTGGCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTQVLTP*KPLGMF Trigger: GAACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTG...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTTGGCTGACAAATTCTTaGCCTTTGATTCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSWLTNS*PLILSK Trigger: CTTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCA...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGATTGCACACGACCAGATaGCCACAGGGAATGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: IVNLSENFRSAGNPCFSGLHTTR*PQGMNT Trigger: CGTGTTCATTCCCTGTGGCCATCTGGTCGTGTGCAA...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR TCA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAGCAAGTTCCTGGGAATaGACTAGTGCACTAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVNLSENFRSAGNPCFSGASSWE*TSALEG Trigger: GCCTTCTAGTGCACTAGTTCATTCCCAGGAACTTGC...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR TCA 90 bp | ATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAAAAGGGAGTTTCTGAATaGGGTTGCTGCAGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLRISGVQAIPAFQEQEKGVSE*GCCSVS Trigger: GGAAACACTGCAGCAACCTCATTCAGAAACTCCCTT...TTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCTTCTCTGTGTTCATTaGAAAGTGGTAGGGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSLLCVH*KVVGTC Trigger: ACAAGTCCCTACCACTTTGCAATGAACACAGAGAAG...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCAGTATCAATCAGTGTaGTTGCTTGTAAGGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSQYQSV*LLVRCV Trigger: CACACACCTTACAAGCAAGCACACTGATTGATACTG...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | ATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACACTCTTCATCAGCTTaGCTAGAAAGGCGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLRISGVQAIPAFQEQEHSSSA*LERRCL Trigger: AAGACAGCGCCTTTCTAGCCAAGCTGATGAAGAGTG...TTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAAGTAGAAGCCTGCTTTaGCCAGCTTTGCTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IVNLSENFRSAGNPCFSGSRSLL*PALLVT Trigger: TGTCACCAGCAAAGCTGGCCAAAGCAGGCTTCTACT...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | GGGTCAATTTCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTTGGCTGACAAATTCTTaGCCTTTGATTCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSISRREFLNEVAAVFPFWLTNS*PLILSK Trigger: CTTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCA...AAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGAAATTGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| 3UTR CAA 72 bp | CCTAGAAAGCCTTTTGTGTTCCCCAGATTTAGACAGTaGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRKPFVFPRFRQ*SLHVLLQTLFY Trigger: ATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAAATCTGGGGAACACAAAAGGCTTTCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTAGTATTCTCAGAACTTaGAAAGCTCAAAGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSSILRT*KAQRHG Trigger: ACCATGCCTTTGAGCTTTGCAAGTTCTGAGAATACT...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR GCA 90 bp | TTAGACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCAAGTATTCTCAGAACTTaGAAAGCTCAAAGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSCLFTFSFRPCSISWASILRT*KAQRHG Trigger: ACCATGCCTTTGAGCTTTGCAAGTTCTGAGAATACT...TGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CCA 90 bp | GATTTAGACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGTGGCTGACAAATTCTTaGCCTTTGATTCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLDSCLFTFSFRPCSISWWLTNS*PLILSK Trigger: CTTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCA...CCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR GCA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTCTCCTAATGTCCTGTTaGACAAATATATCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLYLCVWRCLVLSRLASSLLMSC*TNISLY Trigger: ATACAGAGATATATTTGTGCAACAGGACATTAGGAG...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTACACACGTCAAATGTTaGAAAAGCACCATTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQECRQSLLFRNKNKTLSTHVKC*KSTILF Trigger: GAACAAAATGGTGCTTTTCCAACATTTGACGTGTGT...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CCA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGACACATTCTTTCCTCCTaGAGTTTCCGCAACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVNLSENFRSAGNPCFSGHILSS*SFRNCS Trigger: AGAACAGTTGCGGAAACTCCAGGAGGAAAGAATGTG...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS GCA 90 bp | GATGGCCCTTGCACTGACTCCTCCTCCTCGGCCGCCTGCTCCATCTaGTCCTCTCTCATCTCGTCTTCTGCATCGAGTAAGCCTATAACG | + |
|
Preference number: 5 (lower is better) Translates to: DGPCTDSSSSAACSI*SSLISSSASSKPIT Trigger: CGTTATAGGCTTACTCGATGCAGAAGACGAGATGAGAGAGGAGCAGATGGAGCAGGCGGCCGAGGAGGAGGAGTCAGTGCAAGGGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS GCA 90 bp | CTGTTCAGTGATGGCCCTTGCACTGACTCCTCCTCCTCGGCCGCCTaGTCCATCTGCTCCTCTCTCATCTCGTCTTCTGCATCGAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFSDGPCTDSSSSAA*SICSSLISSSASSK Trigger: CTTACTCGATGCAGAAGACGAGATGAGAGAGGAGCAGATGGAGCAGGCGGCCGAGGAGGAGGAGTCAGTGCAAGGGCCATCACTGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS GCA 90 bp | TTCCGGATTAGTGCTAGATCATCTGACTCCTCCTCCTCGGCCGCCTaGTCCATCTGCTCCTCTCTCATCTCGTCTTCTGCATCGAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRISARSSDSSSSAA*SICSSLISSSASSK Trigger: CTTACTCGATGCAGAAGACGAGATGAGAGAGGAGCAGATGGAGCAGGCGGCCGAGGAGGAGGAGTCAGATGATCTAGCACTAATCCGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | ATCCAGGCTGGCCACTCACTGTATAACCCCGGCTGGCTAGGAATGTATGACCCTCTGCTTTGGCCAGCTTaGCTGGTGACAGAAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: IQAGHSLYNPGWLGMYDPLLWPA*LVTEKT Trigger: TGTCTTTTCTGTCACCAGCAAAGCTGGCCAAAGCAG...AGGGTCATACATTCCTAGCCAGCCGGGGTTATACAGTGAGTGGCCAGCCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGACAGATGCTGCCACATTTGGCCTCCTAGAAAGCCTTTTGTGTTCCCCCTAGCTTCCAGACTGTaGGCTGGATTCAAAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: APDRCCHIWPPRKPFVFPLASRL*AGFKVC Trigger: ACAGACTTTGAATCCAGCCAACAGTCTGGAAGCTAG...GGGGAACACAAAAGGCTTTCTAGGAGGCCAAATGTGGCAGCATCTGTCTGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS GCA 90 bp | GTGCTCATCATGACGACATCTTCCGAACTTTCTCCAGGGCCAAAATaGACGATTGCTGCGTCTGCATTCTCATCTTCTGGGGAGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLIMTTSSELSPGPK*TIAASAFSSSGESD Trigger: GTCAGACTCCCCAGAAGATGAGAATGCAGACGCAGCAATCGTGCATTTTGGCCCTGGAGAAAGTTCGGAAGATGTCGTCATGATGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000161642.8 |
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| CDS-3UTR CAA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAGTGCGCACTGTGCCCTaGATGGTCCCTCTACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTVRTVP*MVPLQM Trigger: CATCTGTAGAGGGACCATCAAGGGCACAGTGCGCAC...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS TCA 90 bp | TGTGTCTGCATGCTCAGGTTAGAGACAGTGTATCTCGAAGCAGACTaGCCCAAGTCTTTTAAGAACGGACAGCTGGGGAAATGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CVCMLRLETVYLEAD*PKSFKNGQLGKCLW Trigger: CCAGAGGCATTTCCCCAGCTGTCCGTTCTTAAAAGACTTGGGTCAGTCTGCTTCGAGATACACTGTCTCTAACCTGAGCATGCAGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 |
||
| CDS CCA 90 bp | CGTGGAAGGAAGAGAAGGCCGAGGACTAGCTTCCAGACTGTTGGCTaGATTCAAAGTCTGTACAAAGTTGCAGCTGGGGTACAACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRKRRPRTSFQTVG*IQSLYKVAAGVQLS Trigger: AGAAAGTTGTACCCCAGCTGCAACTTTGTACAGACTTTGAATCCAGCCAACAGTCTGGAAGCTAGTCCTCGGCCTTCTCTTCCTTCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
||
| CDS CCA 90 bp | CTTCCAGACTGTTGGCTGGATTCAAAGTCTGTACAAAGTTGCAGCTaGGGTACAACTTTCTGTGCTTCTCCATGGGACTGTCCCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPDCWLDSKSVQSCS*GTTFCASPWDCPLV Trigger: AACAAGGGGACAGTCCCATGGAGAAGCACAGAAAGTTGTACCCCAGCTGCAACTTTGTACAGACTTTGAATCCAGCCAACAGTCTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
||
| CDS TCA 90 bp | GCTCAAAGCAGGACAATCTTGATTTGCTCGGAAGTTCACAGGGTCTaGGGGAAAGCTCGAGTAAGAGCCACTGAAATAGCCAGTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQSRTILICSEVHRV*GKARVRATEIASIL Trigger: GAGAATACTGGCTATTTCAGTGGCTCTTACTCGAGCTTTCCCTCAGACCCTGTGAACTTCCGAGCAAATCAAGATTGTCCTGCTTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
||
| CDS GCA 90 bp | GGATTCAAAGTCTGTACAAAGTTGCAGCTGGGGTACAACTTTCTGTaGTTCTCCATGGGACTGTCCCCTTGTTTCCAGTTGTCTAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GFKVCTKLQLGYNFL*FSMGLSPCFQLSSI Trigger: GATGCTAGACAACTGGAAACAAGGGGACAGTCCCATGGAGAAGCACAGAAAGTTGTACCCCAGCTGCAACTTTGTACAGACTTTGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
||
| CDS GCA 90 bp | AAAGCTCGAGTAAGAGCCACTGAAATAGCCAGTATTCTCAGAACTTaGAAAGCTCAAAGGCATGGTGCTCATCGCCGTGGAAGGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KARVRATEIASILRT*KAQRHGAHRRGRKR Trigger: TCTCTTCCTTCCACGGCGATGAGCACCATGCCTTTGAGCTTTGCAAGTTCTGAGAATACTGGCTATTTCAGTGGCTCTTACTCGAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTATATTTGTGTGTTTGGCGGTGTCTCGTGCTATCCAGGCTGGCCTCAAGTCAGGACAATCTTGATTaGCTCGGAAGTTCACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLYLCVWRCLVLSRLASSQDNLD*LGSSQG Trigger: ACCCTGTGAACTTCCGAGCAAATCAAGATTGTCCTG...ACTTGAGGCCAGCCTGGATAGCACGAGACACCGCCAAACACACAAATATAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGCTGGCCACTCACTGTATAACCCCGGCTGGCTAGGAATGTATGACCCTGATTATTATACATACTaGCTGCGTCTGCATTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQAGHSLYNPGWLGMYDPDYYTY*LRLHSH Trigger: ATGAGAATGCAGACGCAGCAAGTATGTATAATAATC...AGGGTCATACATTCCTAGCCAGCCGGGGTTATACAGTGAGTGGCCAGCCTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS TCA 90 bp | CCAGCTTTGCTGGTGACAGAAAAGACAATGGCCATGTTTCATAGGTaGGTAATCTGGCCTTCTCTGTGTTCATTGCAAAGTGGTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PALLVTEKTMAMFHR*VIWPSLCSLQSGRD Trigger: GTCCCTACCACTTTGCAATGAACACAGAGAAGGCCAGATTACTCACCTATGAAACATGGCCATTGTCTTTTCTGTCACCAGCAAAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 |
||
| CDS GCA 90 bp | GTAATCTGGCCTTCTCTGTGTTCATTGCAAAGTGGTAGGGACTTGTaGTCAAAGCAGGACAATCTTGATTTGCTCGGAAGTTCACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VIWPSLCSLQSGRDL*SKQDNLDLLGSSQG Trigger: ACCCTGTGAACTTCCGAGCAAATCAAGATTGTCCTGCTTTGAGCACAAGTCCCTACCACTTTGCAATGAACACAGAGAAGGCCAGATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000159323.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGGCATTACAGGACAATCTTGATTaGCTCGGAAGTTCACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSCLFTFSFRPCSISWALQDNLD*LGSSQG Trigger: ACCCTGTGAACTTCCGAGCAAATCAAGATTGTCCTG...TAATGCCCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCCTTCTCTGTGTTCATaGCAAAGTGGTAGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQECRQSLLFRNKNKTLSPSLCS*QSGRDL Trigger: CAAGTCCCTACCACTTTGCAATGAACACAGAGAAGG...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTGCAAGTACTCACACCTaGGAAACCACTTGGCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: FQECRQSLLFRNKNKTLSASTHT*ETTWHV Trigger: AACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTGC...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR CAA 90 bp | TCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTAACACAATAGCCAGCTTGAACTaGGCTGACAAATTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRREFLNEVAAVFPFANTIASLN*ADKFLA Trigger: GGCCAAGAATTTGTCAGCCAAGTTCAAGCTGGCTAT...TGTGTTAGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
||
| CDS-3UTR CAA 90 bp | GATTTAGACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGATAGCCAGCTTGAACTaGGCTGACAAATTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLDSCLFTFSFRPCSISWIASLN*ADKFLA Trigger: GGCCAAGAATTTGTCAGCCAAGTTCAAGCTGGCTAT...CCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAGCAACTGTTCTTCCATaGGTAGAGCTGCAATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTATVLP*VELQCH Trigger: ATGACATTGCAGCTCTACCAATGGAAGAACAGTTGC...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGACTGCTTTGGCCAGCTTaGCTGGTGACAGAAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: IVNLSENFRSAGNPCFSGLLWPA*LVTEKT Trigger: TGTCTTTTCTGTCACCAGCAAAGCTGGCCAAAGCAG...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS CCA 90 bp | GCACTTAGGAGGCAATACAGCATTGGTGTCACACACGTCAAATGTTaGAAAAGCACCATTTTGTTCTTCCGGATTAGTGCTAGATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ALRRQYSIGVTHVKC*KSTILFFRISARSS Trigger: AGATGATCTAGCACTAATCCGGAAGAACAAAATGGTGCTTTTCCAACATTTGACGTGTGTGACACCAATGCTGTATTGCCTCCTAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR CAA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGACTAGCTTCCAGACTGTaGGCTGGATTCAAAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IVNLSENFRSAGNPCFSGLASRL*AGFKVC Trigger: ACAGACTTTGAATCCAGCCAACAGTCTGGAAGCTAG...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACAACAAATTCTTGGCCTTaGATTCTGAGCAAGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTTNSWP*ILSKYS Trigger: TGAGTACTTGCTCAGAATCAAAGGCCAAGAATTTGT...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR CAA 90 bp | GATTTAGACAGTTGTCTCTTCACGTTCTCCTTCAGACCCTGTTCTATTAGCTGGTTGGCTGACAAATTCTaGGCCTTTGATTCTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DLDSCLFTFSFRPCSISWLADKF*AFDSEQ Trigger: TTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCAA...CCAGCTAATAGAACAGGGTCTGAAGGAGAACGTGAAGAGACAACTGTCTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CAA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAATAGCCAGCTTGAACTaGGCTGACAAATTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVNLSENFRSAGNPCFSGIASLN*ADKFLA Trigger: GGCCAAGAATTTGTCAGCCAAGTTCAAGCTGGCTAT...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTCATGACACACACACGTCAAATGTaGGAAAAGCACCATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SAGNPCFSGTRTKPSLMTHTRQM*EKHHFV Trigger: AACAAAATGGTGCTTTTCCAACATTTGACGTGTGTG...TGTCATGAGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | TCAATTTCCCGAAGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTACAAATTCTTGGCCTTaGATTCTGAGCAAGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SISRREFLNEVAAVFPFATNSWP*ILSKYS Trigger: TGAGTACTTGCTCAGAATCAAAGGCCAAGAATTTGT...AGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCTTCGGGAAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGTTTCTGAATGAGGTTGCTGCAGTGTTTCCTTTTGCTAACACAGTATCATTGGCTGACAAATTCTaGGCCTTTGATTCTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: REFLNEVAAVFPFANTVSLADKF*AFDSEQ Trigger: TTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCAA...TGATACTGTGTTAGCAAAAGGAAACACTGCAGCAACCTCATTCAGAAACTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS-3UTR CAA 90 bp | ATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAATGGAAAAGCACCATTTaGTTCTTCCGGATTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFLRISGVQAIPAFQEQEWKSTI*FFRISA Trigger: AGCACTAATCCGGAAGAACAAAATGGTGCTTTTCCA...TTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGATTCTGTTTCACAGCATaGCACTCCTGTTCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IVNLSENFRSAGNPCFSGFCFTA*HSCSVM Trigger: CATCACTGAACAGGAGTGCAATGCTGTGAAACAGAA...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | TTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGAACAAGAACAAAACCCTCTCTACTCCTAATGTCCTGTaGCACAAATATATCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FQECRQSLLFRNKNKTLSTPNVL*HKYISV Trigger: TACAGAGATATATTTGTGCAACAGGACATTAGGAGT...AGAGAGGGTTTTGTTCTTGTTCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | ATTGTAAATCTTTCTGAGAATTTCAGGAGTGCAGGCAATCCCTGCTTTTCAGGATTGGCTGACAAATTCTaGGCCTTTGATTCTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IVNLSENFRSAGNPCFSGLADKF*AFDSEQ Trigger: TTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCAA...TCCTGAAAAGCAGGGATTGCCTGCACTCCTGAAATTCTCAGAAAGATTTACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS-3UTR CAA 90 bp | ACAAACATACTAGCAGGCAAAACACCAATGCACATACATGAAAGTAAACAAATGGCAAGTACTCACACCTaGGAAACCACTTGGCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: TNILAGKTPMHIHESKQMASTHT*ETTWHV Trigger: AACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTGC...CATTTGTTTACTTTCATGTATGTGCATTGGTGTTTTGCCTGCTAGTATGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGAGAAGGAATGTGTGCACTATGGCACAAATTCTTGGCCTTaGATTCTGAGCAAGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLSFFLSFFLEKECVHYGTNSWP*ILSKYS Trigger: TGAGTACTTGCTCAGAATCAAAGGCCAAGAATTTGT...GCCATAGTGCACACATTCCTTCTCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115672.2 |
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| CDS GCA 72 bp | GATGGCCCTTGCACTGACTCCTCCTCCTCGGCCGCCTaGTCCATCTGCTCCTCTCTCATCTCGTCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DGPCTDSSSSAA*SICSSLISSSA Trigger: TGCAGAAGACGAGATGAGAGAGGAGCAGATGGAGCAGGCGGCCGAGGAGGAGGAGTCAGTGCAAGGGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS CAA 72 bp | CAGATGGGACACTTCCTCAGAGAGGGAGCGCAGTCTTaGCACACGACCAGATGGCCACAGGGAATGAACACG | + |
|
Preference number: 6 (lower is better) Translates to: QMGHFLREGAQS*HTTRWPQGMNT Trigger: CGTGTTCATTCCCTGTGGCCATCTGGTCGTGTGCAAAGACTGCGCTCCCTCTCTGAGGAAGTGTCCCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS CAA 90 bp | GTCCCTCTACAGATGGGACACTTCCTCAGAGAGGGAGCGCAGTCTTaGCACACGACCAGATGGCCACAGGGAATGAACACGATGGATACC | + |
|
Preference number: 6 (lower is better) Translates to: VPLQMGHFLREGAQS*HTTRWPQGMNTMDT Trigger: GGTATCCATCGTGTTCATTCCCTGTGGCCATCTGGTCGTGTGCAAAGACTGCGCTCCCTCTCTGAGGAAGTGTCCCATCTGTAGAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS GCA 72 bp | CAGTATTCTCAGAACTTGCAAAGCTCAAAGGCATGGTaGTCATCGCCGTGGAAGGAAGAGAAGGCCGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QYSQNLQSSKAW*SSPWKEEKAED Trigger: GTCCTCGGCCTTCTCTTCCTTCCACGGCGATGAGCACCATGCCTTTGAGCTTTGCAAGTTCTGAGAATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
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| CDS CAA 72 bp | GGTAGGGACTTGTGCTCAAAGCAGGACAATCTTGATTaGCTCGGAAGTTCACAGGGTCTGAGGGAAAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GRDLCSKQDNLD*LGSSQGLRESS Trigger: CGAGCTTTCCCTCAGACCCTGTGAACTTCCGAGCAAATCAAGATTGTCCTGCTTTGAGCACAAGTCCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
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| CDS CAA 72 bp | CATCTTCCGAACTTTCTCCAGGGCCAAAATGCACGATaGCTGCGTCTGCATTCTCATCTTCTGGGGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLPNFLQGQNAR*LRLHSHLLGSL Trigger: CAGACTCCCCAGAAGATGAGAATGCAGACGCAGCAATCGTGCATTTTGGCCCTGGAGAAAGTTCGGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000161642.8 |
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| CDS CAA 90 bp | GGACTAGCTTCCAGACTGTTGGCTGGATTCAAAGTCTGTACAAAGTaGCAGCTGGGGTACAACTTTCTGTGCTTCTCCATGGGACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLASRLLAGFKVCTK*QLGYNFLCFSMGLS Trigger: GGACAGTCCCATGGAGAAGCACAGAAAGTTGTACCCCAGCTGCAACTTTGTACAGACTTTGAATCCAGCCAACAGTCTGGAAGCTAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
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| CDS GCA 72 bp | GTCTGTACAAAGTTGCAGCTGGGGTACAACTTTCTGTaGTTCTCCATGGGACTGTCCCCTTGTTTCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCTKLQLGYNFL*FSMGLSPCFQL Trigger: CAACTGGAAACAAGGGGACAGTCCCATGGAGAAGCACAGAAAGTTGTACCCCAGCTGCAACTTTGTACAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
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| CDS GCA 72 bp | ATGACGACATCTTCCGAACTTTCTCCAGGGCCAAAATaGACGATTGCTGCGTCTGCATTCTCATCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MTTSSELSPGPK*TIAASAFSSSG Trigger: CCCAGAAGATGAGAATGCAGACGCAGCAATCGTGCATTTTGGCCCTGGAGAAAGTTCGGAAGATGTCGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000161642.8 |
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| CDS CCA 72 bp | AAGAGAAGGCCGAGGACTAGCTTCCAGACTGTTGGCTaGATTCAAAGTCTGTACAAAGTTGCAGCTGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KRRPRTSFQTVG*IQSLYKVAAGV Trigger: TACCCCAGCTGCAACTTTGTACAGACTTTGAATCCAGCCAACAGTCTGGAAGCTAGTCCTCGGCCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
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| CDS TCA 72 bp | AGGACAATCTTGATTTGCTCGGAAGTTCACAGGGTCTaGGGGAAAGCTCGAGTAAGAGCCACTGAAATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTILICSEVHRV*GKARVRATEIA Trigger: GGCTATTTCAGTGGCTCTTACTCGAGCTTTCCCTCAGACCCTGTGAACTTCCGAGCAAATCAAGATTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000115673.3 ENSMUST00000159323.2 |
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| CDS CAA 72 bp | TTCTTTCCTCCTGGAGTTTCCGCAACTGTTCTTCCATaGGTAGAGCTGCAATGTCATCTGTGGGAAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FFPPGVSATVLP*VELQCHLWEDS Trigger: GGAGTCTTCCCACAGATGACATTGCAGCTCTACCAATGGAAGAACAGTTGCGGAAACTCCAGGAGGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS CAA 90 bp | ATCAGTGTGCTTGCTTGTAAGGTGTGTGGTTTCTGTTTCACAGCATaGCACTCCTGTTCAGTGATGGCCCTTGCACTTAGGAGGCAATAC | + |
|
Preference number: 6 (lower is better) Translates to: ISVLACKVCGFCFTA*HSCSVMALALRRQY Trigger: GTATTGCCTCCTAAGTGCAAGGGCCATCACTGAACAGGAGTGCAATGCTGTGAAACAGAAACCACACACCTTACAAGCAAGCACACTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS TCA 72 bp | ATGCTCAGGTTAGAGACAGTGTATCTCGAAGCAGACTaGCCCAAGTCTTTTAAGAACGGACAGCTGGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MLRLETVYLEAD*PKSFKNGQLGK Trigger: TTTCCCCAGCTGTCCGTTCTTAAAAGACTTGGGTCAGTCTGCTTCGAGATACACTGTCTCTAACCTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 |
||
| CDS GCA 72 bp | CAGTTAGAGAATGTTCTAATACGGGCTGCGTGTGTCTaGATGCTCAGGTTAGAGACAGTGTATCTCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLENVLIRAACV*MLRLETVYLEA Trigger: TGCTTCGAGATACACTGTCTCTAACCTGAGCATGCAGACACACGCAGCCCGTATTAGAACATTCTCTAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 |
||
| CDS CAA 72 bp | TGGCCTTCTCTGTGTTCATTGCAAAGTGGTAGGGACTaGTGCTCAAAGCAGGACAATCTTGATTTGCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: WPSLCSLQSGRD*CSKQDNLDLLG Trigger: TCCGAGCAAATCAAGATTGTCCTGCTTTGAGCACAAGTCCCTACCACTTTGCAATGAACACAGAGAAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000159323.2 |
||
| CDS CAA 90 bp | TACAGCATTGGTGTCACACACGTCAAATGTTGGAAAAGCACCATTTaGTTCTTCCGGATTAGTGCTAGATCATCTGACTCCTCCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: YSIGVTHVKCWKSTI*FFRISARSSDSSSS Trigger: CGAGGAGGAGGAGTCAGATGATCTAGCACTAATCCGGAAGAACAAAATGGTGCTTTTCCAACATTTGACGTGTGTGACACCAATGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
||
| CDS GCA 72 bp | CCTTCTCTGTGTTCATTGCAAAGTGGTAGGGACTTGTaGTCAAAGCAGGACAATCTTGATTTGCTCGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLCSLQSGRDL*SKQDNLDLLGS Trigger: ACTTCCGAGCAAATCAAGATTGTCCTGCTTTGAGCACAAGTCCCTACCACTTTGCAATGAACACAGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 ENSMUST00000159323.2 |
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| CDS CAA 72 bp | ATGAGGATAGCCAGCTTGAACTTGGCTGACAAATTCTaGGCCTTTGATTCTGAGCAAGTACTCACACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: MRIASLNLADKF*AFDSEQVLTPW Trigger: CCAAGGTGTGAGTACTTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCAAGTTCAAGCTGGCTATCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 |
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| CDS CAA 72 bp | ATGAGGATAGCCAGCTTGAACTTGGCTGACAAATTCTaGGCCTTTGATTCTGAGCAAGTACTCACACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: MRIASLNLADKF*AFDSEQVLTPQ Trigger: CTGAGGTGTGAGTACTTGCTCAGAATCAAAGGCCAAGAATTTGTCAGCCAAGTTCAAGCTGGCTATCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161642.8 |
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| CDS CAA 72 bp | GGTGTCACACACGTCAAATGTTGGAAAAGCACCATTTaGTTCTTCCGGATTAGTGCTAGATCATCTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: GVTHVKCWKSTI*FFRISARSSDS Trigger: GGAGTCAGATGATCTAGCACTAATCCGGAAGAACAAAATGGTGCTTTTCCAACATTTGACGTGTGTGACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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| CDS TCA 72 bp | CTGGTGACAGAAAAGACAATGGCCATGTTTCATAGGTaGGTAATCTGGCCTTCTCTGTGTTCATTGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LVTEKTMAMFHR*VIWPSLCSLQS Trigger: ACTTTGCAATGAACACAGAGAAGGCCAGATTACTCACCTATGAAACATGGCCATTGTCTTTTCTGTCACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013949.15 ENSMUST00000115672.2 |
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| CDS CCA 72 bp | AGGCAATACAGCATTGGTGTCACACACGTCAAATGTTaGAAAAGCACCATTTTGTTCTTCCGGATTAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: RQYSIGVTHVKC*KSTILFFRISA Trigger: AGCACTAATCCGGAAGAACAAAATGGTGCTTTTCCAACATTTGACGTGTGTGACACCAATGCTGTATTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013949.15 |
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