Pregenerated sensors for BIN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022089Ensembl transcript IDs: ENSMUST00000022680.9, ENSMUST00000228717.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTaGTTGTGTTGGCATGAAGGGCCCAGAGAGGCTGAGAGACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: TPGLCPCAGPIGDWL*LCWHEGPREAERPG Trigger: CCCTGGTCTCTCAGCCTCTCTGGGCCCTTCATGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR TCA 90 bp | TCTCTAGAAGGCAGCAGGCAGGCAGTAAGTGCCACAGGTTGTGACTaGGTGAAGGCACTCTGCCAAGTTGGCAGGGCTGTGGCAAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLEGSRQAVSATGCD*VKALCQVGRAVAKL Trigger: CAGCTTTGCCACAGCCCTGCCAACTTGGCAGAGTGCCTTCACTCAGTCACAACCTGTGGCACTTACTGCCTGCCTGCTGCCTTCTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CCA 90 bp | GGACAGCTAGAGACAAAGCCCCAGTTCAAGGGAAAGCTAAACTCCTaGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: GQLETKPQFKGKLNS*ALSLCWTYRGLALV Trigger: AACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAACTGGGGCTTTGTCTCTAGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR GCA 90 bp | TTGGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCTaGAGGCGTTTAGTTTGCTCTTCCAGCTGCTGCAGTTTTCCATAC | + |
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Preference number: 1 (lower is better) Translates to: LDMARSASVLFFMSF*RRLVCSSSCCSFPY Trigger: GTATGGAAAACTGCAGCAGCTGGAAGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| 3UTR CCA 90 bp | CTGCCAAGTTGGCAGGGCTGTGGCAAAGCTGTGACAGCTCCCTCTTaGTGTCAGTTAAAGTACACTGTTGTTTTACTGGAAAACTTTACT | + |
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Preference number: 1 (lower is better) Translates to: LPSWQGCGKAVTAPS*CQLKYTVVLLENFT Trigger: AGTAAAGTTTTCCAGTAAAACAACAGTGTACTTTAACTGACACCAAGAGGGAGCTGTCACAGCTTTGCCACAGCCCTGCCAACTTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGGGCCCAGAGAGGCTGAGAGACCAGGGCACTGTGCCTCACCCAGCAGTCATTGCTTATCAGCACTaGACACAGGGAAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: MKGPERLRDQGTVPHPAVIAYQH*TQGSSS Trigger: GCTGCTGCTTCCCTGTGTCCAGTGCTGATAAGCAAT...GACTGCTGGGTGAGGCACAGTGCCCTGGTCTCTCAGCCTCTCTGGGCCCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGGGAAAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACCACCTGTCTCCAACTaGCTGGCCATTGGGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: FKGKLNSWALSLCWTYRGPPVSN*LAIGRS Trigger: GGACCTCCCAATGGCCAGGCAGTTGGAGACAGGTGG...TCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGAGACCAGGGCACTGTaGCTCACCCAGCAGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: KLNSWALSLCWTYRGLALETRAL*LTQQSK Trigger: TTTAGACTGCTGGGTGAGGCACAGTGCCCTGGTCTC...CAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCCAGTTCAAGGGAAAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCCAACTGCCTGGCCATTaGGAGGTCCATGAATCCATG | + |
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Preference number: 2 (lower is better) Translates to: KPQFKGKLNSWALSLCWTQLPGH*EVHESM Trigger: CATGGATTCATGGACCTCCCAATGGCCAGGCAGTTG...GGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAACTGGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CAA 90 bp | GGCTTCAAGTTCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTaGGCCAGACACTATAGCACACTCTGGACGGTTCTGGAAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GFKFHRKPRPFQRLL*ARHYSTLWTVLEVK Trigger: TTTTACTTCCAGAACCGTCCAGAGTGTGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGAACTTGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGGGCCCAGAGAGGCTGAGAGACCAGGGCACTGTGCCTCACCCAGCAGTCAGGGTTTTTCTACATTaGTTATCAGCACTGGACACA | + |
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Preference number: 2 (lower is better) Translates to: MKGPERLRDQGTVPHPAVRVFLH*LSALDT Trigger: TGTGTCCAGTGCTGATAAGCAATGTAGAAAAACCCT...GACTGCTGGGTGAGGCACAGTGCCCTGGTCTCTCAGCCTCTCTGGGCCCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGCTGTGGCAAAGCTGTGACAGCTCCCTCTTGGTGTCAGTTAAAGTACACTGGCTTTGGTTGTGTTaGCATGAAGGGCCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AGLWQSCDSSLLVSVKVHWLWLC*HEGPRE Trigger: CTCTCTGGGCCCTTCATGCCAACACAACCAAAGCCA...GTGTACTTTAACTGACACCAAGAGGGAGCTGTCACAGCTTTGCCACAGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CAA 90 bp | CTAGAGACAAAGCCCCAGTTCAAGGGAAAGCTAAACTCCTGGGCTTaGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGTTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LETKPQFKGKLNSWA*SLCWTYRGLALVVL Trigger: CAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAACTGGGGCTTTGTCTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGATTTGGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCATCTGCTTCTTGGGCTaGCCGATCTTAAATGGAATC | + |
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Preference number: 2 (lower is better) Translates to: ADLDMARSASVLFFMSFCICFLG*PILNGI Trigger: GATTCCATTTAAGATCGGGCAGCCCAAGAAGCAGAT...GCAGAAGGACATGAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAAATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGATTTGGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCGTTTGCTCTTCCAGCTaGTGCAGTTTTCCATACTCC | + |
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Preference number: 2 (lower is better) Translates to: TADLDMARSASVLFFMSFVCSSS*CSFPYS Trigger: GGAGTATGGAAAACTGCAGCAGCTGGAAGAGCAAAC...GAAGGACATGAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAAATCTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTGGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGTTTAAGTCAGAGAACTaGCAAGGTACAATAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: STGHREAAACEAPSIRLKFKSEN*QGTIVA Trigger: GGCCACTATTGTACCTTGCCAGTTCTCTGACTTAAA...CTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCCAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR TCA 72 bp | GGCAGCAGGCAGGCAGTAAGTGCCACAGGTTGTGACTaGGTGAAGGCACTCTGCCAAGTTGGCAGGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GSRQAVSATGCD*VKALCQVGRAV Trigger: CACAGCCCTGCCAACTTGGCAGAGTGCCTTCACTCAGTCACAACCTGTGGCACTTACTGCCTGCCTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CCA 72 bp | TCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTTaGCCAGACACTATAGCACACTCTGGACGGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: STGSPGPSKGSC*PDTIAHSGRFW Trigger: CCAGAACCGTCCAGAGTGTGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CCA 72 bp | TGTGCTGGACCTATAGGGGACTGGCTTTGGTTGTGTTaGCATGAAGGGCCCAGAGAGGCTGAGAGACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: CAGPIGDWLWLC*HEGPREAERPG Trigger: CCCTGGTCTCTCAGCCTCTCTGGGCCCTTCATGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CCA 72 bp | CCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTaGCTTTGGTTGTGTTGGCATGAAGGGCCCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: PGLCPCAGPIGD*LWLCWHEGPRE Trigger: CTCTCTGGGCCCTTCATGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CCA 72 bp | CTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTaGTTGTGTTGGCATGAAGGGCCCAGAGAGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LCPCAGPIGDWL*LCWHEGPREAE Trigger: CTCAGCCTCTCTGGGCCCTTCATGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR TCA 72 bp | AGGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTaGGAGGATGGTGGCTTTCCTAGAGTAGGTCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RALCLTQQSKES*EDGGFPRVGPL Trigger: CAGAGGACCTACTCTAGGAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR GCA 72 bp | GCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCTaGAGGCGTTTAGTTTGCTCTTCCAGCTGCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: ARSASVLFFMSF*RRLVCSSSCCS Trigger: ACTGCAGCAGCTGGAAGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGACCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGGGAAAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGATTCCAAAGGCTCCTGTaGGCCAGACACTATAGCACA | + |
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Preference number: 3 (lower is better) Translates to: FKGKLNSWALSLCWTYRGFQRLL*ARHYST Trigger: TGTGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAA...TCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCAGGCGTCTCTCTCCACTGTTTaGGAAACAATCTGCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: FGHGQVGIGAFLHVLLQASLSTV*ETICFL Trigger: CAAGAAGCAGATTGTTTCCAAAACAGTGGAGAGAGA...CGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| 3UTR CCA 72 bp | TGGCAGGGCTGTGGCAAAGCTGTGACAGCTCCCTCTTaGTGTCAGTTAAAGTACACTGTTGTTTTACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: WQGCGKAVTAPS*CQLKYTVVLLE Trigger: TTCCAGTAAAACAACAGTGTACTTTAACTGACACCAAGAGGGAGCTGTCACAGCTTTGCCACAGCCCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR-3UTR CAA 90 bp | GTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCAGGCGTTTAGTTTGCTCTTCGAAACAATCTGCTTCTaGGGCTGCCCGATCTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: VGIGAFLHVLLQAFSLLFETICF*GCPILN Trigger: ATTTAAGATCGGGCAGCCCAAGAAGCAGATTGTTTC...GAAGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| 3UTR GCA 72 bp | GTGCTTTTCTTCATGTCCTTCTGCAGGCGTTTAGTTTaGTCTTCCAGCTGCTGCAGTTTTCCATACTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VLFFMSFCRRLV*SSSCCSFPYSL Trigger: AAGGGAGTATGGAAAACTGCAGCAGCTGGAAGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAAAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
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| CDS-3UTR CCA 90 bp | GGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTGAGAGGATGGTGGCTTTCGGGCCTGGTGGAGCTTaGCCAGCACGGGGCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GHCASPSSLKSPERMVAFGPGGA*PARGQS Trigger: AGACTGGCCCCGTGCTGGCCAAGCTCCACCAGGCCC...GAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | ATGAAGGGCCCAGAGAGGCTGAGAGACCAGGGCACTGTGCCTCACCCAGCAGTCTCTGAGTGGCCTGGCTaGTCAAGCTGCTGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: MKGPERLRDQGTVPHPAVSEWPG*SSCWVR Trigger: CCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGA...GACTGCTGGGTGAGGCACAGTGCCCTGGTCTCTCAGCCTCTCTGGGCCCTTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | TCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTTGGCCAGACACTATAGCATCTTCTCGGGCCTGGTaGAGCTTGGCCAGCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: STGSPGPSKGSCWPDTIASSRAW*SLASTG Trigger: CCCCGTGCTGGCCAAGCTCCACCAGGCCCGAGAAGA...TGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | AGCACTGGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGAGCTCTTCTCGGGCCTaGTGGAGCTTGGCCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: STGHREAAACEAPSIRLKSSSRA*WSLAST Trigger: CGTGCTGGCCAAGCTCCACCAGGCCCGAGAAGAGCT...CTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCCAGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | TCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTTGGCCAGACACTATAGCACGTACTTCTCCACCTTaGCCTGCAGCCTCCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: STGSPGPSKGSCWPDTIARTSPP*PAASRS Trigger: ACTACGGGAGGCTGCAGGCCAAGGTGGAGAAGTACG...TGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR GCA 90 bp | TCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTTGGCCAGACACTATAGCAAGGGCTGTCACCATGTaGAGAAAGTCCTGGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: STGSPGPSKGSCWPDTIARAVTM*RKSWSC Trigger: GCAGGACCAGGACTTTCTGCACATGGTGACAGCCCT...TGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR GCA 90 bp | AGCACTGGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGCCTGGCTGGTCAAGCTaGTGGGTCAGGTCTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: STGHREAAACEAPSIRLKPGWSS*WVRSPK Trigger: CTTTGGAGACCTGACCCAGCAGCTTGACCAGCCAGG...CTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCCAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR GCA 90 bp | TGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGTTGTGTTGGCATTTTCCCGCTCTCGCTaGTCATCTGAGTGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: WALSLCWTYRGLALVVLAFSRSR*SSEWPG Trigger: GCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAA...TGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CAA 72 bp | TTCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTaGGCCAGACACTATAGCACACTCTGGACGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FHRKPRPFQRLL*ARHYSTLWTVL Trigger: CAGAACCGTCCAGAGTGTGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR TCA 90 bp | TTGGCCAGACACTATAGCACACTCTGGACGGTTCTGGAAGTAAAAAGGCCCCAGCTCTCGCTGCTCATCTaGGTGGCCTGGCTGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LARHYSTLWTVLEVKRPQLSLLI*VAWLVK Trigger: CTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAG...CTGGGGCCTTTTTACTTCCAGAACCGTCCAGAGTGTGCTATAGTGTCTGGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | GGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTGAGAGGATGGTGGCTTTCATGTGCAGAAAGTCCTaGTCCTGCTCACACAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GHCASPSSLKSPERMVAFMCRKS*SCSHSG Trigger: CCCACTGTGTGAGCAGGACCAGGACTTTCTGCACAT...GAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR GCA 90 bp | TCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTTGGCCAGACACTATAGCACCAGGTCGGCATCGGTaGTTTTCTTCATGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: STGSPGPSKGSCWPDTIAPGRHR*FSSCPS Trigger: AGAAGGACATGAAGAAAAGCACCGATGCCGACCTGG...TGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | TCCACAGGAAGCCCAGGCCCTTCCAAAGGCTCCTGTTGGCCAGACACTATAGCACATCCATCCGTTTCATaGCTGTGTCTAGGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: STGSPGPSKGSCWPDTIAHPSVS*LCLGLS Trigger: TGACAGCCCTAGACACAGCCATGAAACGGATGGATG...TGCTATAGTGTCTGGCCAACAGGAGCCTTTGGAAGGGCCTGGGCTTCCTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| 3UTR CAA 72 bp | AAGCCCCAGTTCAAGGGAAAGCTAAACTCCTGGGCTTaGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KPQFKGKLNSWA*SLCWTYRGLAL Trigger: CAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAACTGGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | TGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGTTGTGTTGGCATCTTCACAGCAGATTTaGACATGGCCAGGTCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: WALSLCWTYRGLALVVLASSQQI*TWPGRH Trigger: ATGCCGACCTGGCCATGTCCAAATCTGCTGTGAAGA...TGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR GCA 90 bp | AGCACTGGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGGTTTTGGAAACAATCTaGTTCTTGGGCTGCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: STGHREAAACEAPSIRLKVLETI*FLGCPI Trigger: GATCGGGCAGCCCAAGAAGCAGATTGTTTCCAAAAC...CTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCCAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR GCA 90 bp | AGCACTGGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGGTTTGCTCTTCCAGCTaGTGCAGTTTTCCATACTCC | + |
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Preference number: 4 (lower is better) Translates to: STGHREAAACEAPSIRLKVCSSS*CSFPYS Trigger: GGAGTATGGAAAACTGCAGCAGCTGGAAGAGCAAAC...CTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCCAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | GGACCTATAGGGGACTGGCTTTGGTTGTGTTGGCATGAAGGGCCCAGAGAGGCTTTGGACAGTAGGTCCTaGGATATCTTCACAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: GPIGDWLWLCWHEGPREALDSRS*DIFTAD Trigger: ATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAA...AGCCTCTCTGGGCCCTTCATGCCAACACAACCAAAGCCAGTCCCCTATAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | AGGGTTTTTCTACATTGCTTATCAGCACTGGACACAGGGAAGCAGCAGCCTGTGGGCTGGTCAAGCTGCTaGGTCAGGTCTCCAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: RVFLHCLSALDTGKQQPVGWSSC*VRSPKI Trigger: GATCTTTGGAGACCTGACCCAGCAGCTTGACCAGCC...CACAGGCTGCTGCTTCCCTGTGTCCAGTGCTGATAAGCAATGTAGAAAAACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS-3UTR CCA 90 bp | TTTGGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCAGGCGTTGCTGCGATGGTGGTaGCAATGGTACTGTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FGHGQVGIGAFLHVLLQALLRWW*QWYCDE Trigger: TTCATCACAGTACCATTGCCACCACCATCGCAGCAA...CGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCAGGCGTTTGTTTTGCTGCGATGGTaGTGGCAATGGTACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHGQVGIGAFLHVLLQAFVLLRW*WQWYCD Trigger: ATCACAGTACCATTGCCACCACCATCGCAGCAAAAC...AAACGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGACCTGGCCATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTGAGAGGATGGTGGCTTTCTCAATCACTGTCTTTTaGATCTGGTTCACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHCASPSSLKSPERMVAFSITVF*IWFTFS Trigger: GGAGAAGGTGAACCAGATCCAAAAGACAGTGATTGA...GAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CCA 90 bp | GGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGGACATGGGAGTTGTTTATTCTTaGCCTCAAAGTCTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHREAAACEAPSIRLKDMGVVYS*PQSLPA Trigger: TGCGGGAAGACTTTGAGGCCAAGAATAAACAACTCC...CATGTCCTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGATCTGCTTCTTGGGCTaGCCGATCTTAAATGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KLNSWALSLCWTYRGLALICFLG*PILNGI Trigger: GATTCCATTTAAGATCGGGCAGCCCAAGAAGCAGAT...CAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGTTGTGTTTCTTCATGTCCTTCTaGAGGCGTTTAGTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLCPCAGPIGDWLWLCFFMSF*RRLVCS Trigger: AGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAA...ACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR GCA 90 bp | GTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCAGGCGTTTAGTTTGCTCTTCTCTGGAGAGTTTTGCTaGGATGGTGGTGGCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGIGAFLHVLLQAFSLLFSGEFC*DGGGNG Trigger: ACCATTGCCACCACCATCGCAGCAAAACTCTCCAGA...GAAGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTCCTCCTCTTTCAAGCTGCTGTACCCTCTCTGTTTGCCAGGCCTCAGTTCTTGGGAATATGCTGCTaGACTTTTTCAGAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLFQAAVPSLFARPQFLGICC*TFSEVQ Trigger: TTGAACCTCTGAAAAAGTTCAGCAGCATATTCCCAA...GAACTGAGGCCTGGCAAACAGAGAGGGTACAGCAGCTTGAAAGAGGAGGAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTTTTTCTACATTGCTTATCAGCACTGGACACAGGGAAGCAGCAGCCTGTGTGCTCTTCCAGCTGCTaGAGTTTTCCATACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVFLHCLSALDTGKQQPVCSSSC*SFPYSL Trigger: AAGGGAGTATGGAAAACTGCAGCAGCTGGAAGAGCA...CACAGGCTGCTGCTTCCCTGTGTCCAGTGCTGATAAGCAATGTAGAAAAACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTAGTGGACAGCTAGAGACAAAGCCCCAGTTCAAGGGAAAGCTAAACTCCTGGTTCACCTTCTCCTaGTTGAAGGCATCCATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSGQLETKPQFKGKLNSWFTFS*LKASIR Trigger: ACGGATGGATGCCTTCAACCAGGAGAAGGTGAACCA...GGAGTTTAGCTTTCCCTTGAACTGGGGCTTTGTCTCTAGCTGTCCACTAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CCA 90 bp | TGTGACAGCTCCCTCTTGGTGTCAGTTAAAGTACACTGTTGTTTTACTGGAAAACGCTGCTCATCTGAGTaGCCTGGCTGGTCAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CDSSLLVSVKVHCCFTGKRCSSE*PGWSSC Trigger: GCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCG...TTTTCCAGTAAAACAACAGTGTACTTTAACTGACACCAAGAGGGAGCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CCA 90 bp | GTCGGCATCGGTGCTTTTCTTCATGTCCTTCTGCAGGCGTTTAGTTTGCTCTTCAGAGTTTTGCTGCGATaGTGGTGGCAATGGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGIGAFLHVLLQAFSLLFRVLLR*WWQWYC Trigger: ACAGTACCATTGCCACCACCATCGCAGCAAAACTCT...GAAGAGCAAACTAAACGCCTGCAGAAGGACATGAAGAAAAGCACCGATGCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
||
| 3UTR CAA 72 bp | TTGGCAGGGCTGTGGCAAAGCTGTGACAGCTCCCTCTaGGTGTCAGTTAAAGTACACTGTTGTTTTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAGLWQSCDSSL*VSVKVHCCFTG Trigger: TCCAGTAAAACAACAGTGTACTTTAACTGACACCAAGAGGGAGCTGTCACAGCTTTGCCACAGCCCTGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGGAAAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCTATAGGGGAGATCTTATGCATTTCTaGGTAGTATATAACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKGKLNSWALSLCWTYRGDLMHF*VVYNLC Trigger: GCACAGGTTATATACTACTCAGAAATGCATAAGATC...TCCCCTATAGGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTTGGAAACAATCTGCTTCTTGGGCTGCCCGATCTTAAATGGAATCCTGCGATGGTGGTGGCAATaGTACTGTGATGAAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVLETICFLGCPILNGILRWWWQ*YCDEDQ Trigger: TTGGTCTTCATCACAGTACCATTGCCACCACCATCG...CAGGATTCCATTTAAGATCGGGCAGCCCAAGAAGCAGATTGTTTCCAAAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228717.2 |
||
| 3UTR CAA 72 bp | AAAATTCCAGTAATACAGGTGAGACAGAGCCTTGCTTaGAGGGCAGCAGTTCAACATGTAACATTTCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KIPVIQVRQSLA*RAAVQHVTFPS Trigger: ACTAGGAAATGTTACATGTTGAACTGCTGCCCTCAAAGCAAGGCTCTGTCTCACCTGTATTACTGGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 90 bp | AGGGCTCGGAGTTCACTTAGTTTGGTCTCATTTTCCCGCTCTCGCTaGTCATCTGAGTGGCCTGGCTGGTCAAGCTGCTGGGTCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RARSSLSLVSFSRSR*SSEWPGWSSCWVRS Trigger: AGACCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAAACTAAGTGAACTCCGAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | GGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTGAGAGGATGGTGGCTTTCCGCTTCACCGCCATGTaGAGGCTTGGGAATATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHCASPSSLKSPERMVAFRFTAM*RLGNML Trigger: CAGCATATTCCCAAGCCTCAACATGGCGGTGAAGCG...GAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 90 bp | GGCTGCCATAGAACCGCGGCATCTCATCCAGGAGTTGTTTATTCTTaGCCTCAAAGTCTTCCCGCACAGGACGTAGCTCTTCTCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCHRTAASHPGVVYS*PQSLPAQDVALLGP Trigger: AGGCCCGAGAAGAGCTACGTCCTGTGCGGGAAGACTTTGAGGCCAAGAATAAACAACTCCTGGATGAGATGCCGCGGTTCTATGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | AGCACTGGACACAGGGAAGCAGCAGCCTGTGAGGCTCCTAGTATCAGGCTTAAGCTGCAGGCGTTTAGTTaGCTCTTCCAGCTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STGHREAAACEAPSIRLKLQAFS*LFQLLQ Trigger: CTGCAGCAGCTGGAAGAGCAAACTAAACGCCTGCAG...CTTAAGCCTGATACTAGGAGCCTCACAGGCTGCTGCTTCCCTGTGTCCAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 90 bp | AAGGCATCCATCCGTTTCATGGCTGTGTCTAGGGCTGTCACCATGTaGAGAAAGTCCTGGTCCTGCTCACACAGTGGGTTGGACAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KASIRFMAVSRAVTM*RKSWSCSHSGLDSR Trigger: CCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAGCCCTAGACACAGCCATGAAACGGATGGATGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 90 bp | AGAAAGTCCTGGTCCTGCTCACACAGTGGGTTGGACAGTAGGTCCTaGGATATCTTCACAGCAGATTTGGACATGGCCAGGTCGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: RKSWSCSHSGLDSRS*DIFTADLDMARSAS Trigger: CGATGCCGACCTGGCCATGTCCAAATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTTGTCCCTGTGCTGGACCTATAGGGGACTGGCTTTGGTTGTGTTGGCAATCTTCACAGCAGATTaGGACATGGCCAGGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WALSLCWTYRGLALVVLAIFTAD*DMARSA Trigger: TGCCGACCTGGCCATGTCCAAATCTGCTGTGAAGAT...TGCCAACACAACCAAAGCCAGTCCCCTATAGGTCCAGCACAGGGACAAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 90 bp | ATGGCTGTGTCTAGGGCTGTCACCATGTGCAGAAAGTCCTGGTCCTaGTCACACAGTGGGTTGGACAGTAGGTCCTGGGATATCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MAVSRAVTMCRKSWS*SHSGLDSRSWDIFT Trigger: TGTGAAGATATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAGCCCTAGACACAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | GGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTGAGAGGATGGTGGCTTTCAGGAGTTGTTTATTCTaGGCCTCAAAGTCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GHCASPSSLKSPERMVAFRSCLF*ASKSSR Trigger: GCGGGAAGACTTTGAGGCCAAGAATAAACAACTCCT...GAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | GGGCACTGTGCCTCACCCAGCAGTCTAAAGAGTCCTGAGAGGATGGTGGCTTTCCGGAGTTCACTTAGTTaGGTCTCATTTTCCCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GHCASPSSLKSPERMVAFRSSLS*VSFSRS Trigger: AGAGCGGGAAAATGAGACCAAACTAAGTGAACTCCG...GAAAGCCACCATCCTCTCAGGACTCTTTAGACTGCTGGGTGAGGCACAGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 90 bp | CCCGGATCAGGGACTCAAAGCTGGGTTGGAAATAGTCAAGTCGGCTaGCATAGAACCGCGGCATCTCATCCAGGAGTTGTTTATTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGTQSWVGNSQVG*HRTAASHPGVVYSW Trigger: CCAAGAATAAACAACTCCTGGATGAGATGCCGCGGTTCTATGGCAGCCGACTTGACTATTTCCAACCCAGCTTTGAGTCCCTGATCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 90 bp | CTGTCACCATGTGCAGAAAGTCCTGGTCCTGCTCACACAGTGGGTTaGACAGTAGGTCCTGGGATATCTTCACAGCAGATTTGGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPCAESPGPAHTVG*TVGPGISSQQIWTW Trigger: CCATGTCCAAATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 90 bp | TTGGTCTCATTTTCCCGCTCTCGCTGCTCATCTGAGTGGCCTGGCTaGTCAAGCTGCTGGGTCAGGTCTCCAAAGATCTTATGCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSFSRSRCSSEWPG*SSCWVRSPKILCIS Trigger: AGAAATGCATAAGATCTTTGGAGACCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 90 bp | TCACTTAGTTTGGTCTCATTTTCCCGCTCTCGCTGCTCATCTGAGTaGCCTGGCTGGTCAAGCTGCTGGGTCAGGTCTCCAAAGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLVSFSRSRCSSE*PGWSSCWVRSPKIL Trigger: TAAGATCTTTGGAGACCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAAACTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTCCTCTTTCAAGCTGCTGTACCCTCTCTGTTTGCCAGGCCTCAGTTCGAAACAATCTGCTTCTaGGGCTGCCCGATCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALLLFQAAVPSLFARPQFETICF*GCPILN Trigger: ATTTAAGATCGGGCAGCCCAAGAAGCAGATTGTTTC...GAACTGAGGCCTGGCAAACAGAGAGGGTACAGCAGCTTGAAAGAGGAGGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCCCAGTTCAAGGGAAAGCTAAACTCCTGGGCTTTGTCCCTGTGCTGGACCTCTCTCTCCACTGTTTaGGAAACAATCTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPQFKGKLNSWALSLCWTSLSTV*ETICFL Trigger: CAAGAAGCAGATTGTTTCCAAAACAGTGGAGAGAGA...GGTCCAGCACAGGGACAAAGCCCAGGAGTTTAGCTTTCCCTTGAACTGGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTCCTCTTTCAAGCTGCTGTACCCTCTCTGTTTGCCAGGCCTCAGTTCTTCAATCACTGTCTTTaGGATCTGGTTCACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLFQAAVPSLFARPQFFNHCL*DLVHLL Trigger: GAGAAGGTGAACCAGATCCAAAAGACAGTGATTGAA...GAACTGAGGCCTGGCAAACAGAGAGGGTACAGCAGCTTGAAAGAGGAGGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTTTCTACATTGCTTATCAGCACTGGACACAGGGAAGCAGCAGCCTGTGGGACTCAAAGCTGGGTaGGAAATAGTCAAGTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVFLHCLSALDTGKQQPVGLKAG*EIVKSA Trigger: AGCCGACTTGACTATTTCCAACCCAGCTTTGAGTCC...CACAGGCTGCTGCTTCCCTGTGTCCAGTGCTGATAAGCAATGTAGAAAAACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 90 bp | ATGCTGCTGAACTTTTTCAGAGGTTCAATCACTGTCTTTTGGATCTaGTTCACCTTCTCCTGGTTGAAGGCATCCATCCGTTTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MLLNFFRGSITVFWI*FTFSWLKASIRFMA Trigger: AGCCATGAAACGGATGGATGCCTTCAACCAGGAGAAGGTGAACCAGATCCAAAAGACAGTGATTGAACCTCTGAAAAAGTTCAGCAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 72 bp | TTGGTCTCATTTTCCCGCTCTCGCTGCTCATCTGAGTaGCCTGGCTGGTCAAGCTGCTGGGTCAGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSFSRSRCSSE*PGWSSCWVRSP Trigger: TGGAGACCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 72 bp | GCTGTGTCTAGGGCTGTCACCATGTGCAGAAAGTCCTaGTCCTGCTCACACAGTGGGTTGGACAGTAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVSRAVTMCRKS*SCSHSGLDSRS Trigger: GGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAGCCCTAGACACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 72 bp | TCTAGGGCTGTCACCATGTGCAGAAAGTCCTGGTCCTaGTCACACAGTGGGTTGGACAGTAGGTCCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRAVTMCRKSWS*SHSGLDSRSWD Trigger: ATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAGCCCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 72 bp | TTTTCCCGCTCTCGCTGCTCATCTGAGTGGCCTGGCTaGTCAAGCTGCTGGGTCAGGTCTCCAAAGATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FSRSRCSSEWPG*SSCWVRSPKIL Trigger: TAAGATCTTTGGAGACCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 72 bp | ATCCGTTTCATGGCTGTGTCTAGGGCTGTCACCATGTaGAGAAAGTCCTGGTCCTGCTCACACAGTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IRFMAVSRAVTM*RKSWSCSHSGL Trigger: CAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAGCCCTAGACACAGCCATGAAACGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 72 bp | AGTTCACTTAGTTTGGTCTCATTTTCCCGCTCTCGCTaGTCATCTGAGTGGCCTGGCTGGTCAAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSLVSFSRSR*SSEWPGWSSCW Trigger: CCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAAACTAAGTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CCA 72 bp | CAGCCACGATGGAGAGGGCTCGGAGTTCACTTAGTTTaGTCTCATTTTCCCGCTCTCGCTGCTCATCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QPRWRGLGVHLV*SHFPALAAHLS Trigger: ACTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAAACTAAGTGAACTCCGAGCCCTCTCCATCGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CAA 72 bp | TCGGCTGCCATAGAACCGCGGCATCTCATCCAGGAGTaGTTTATTCTTGGCCTCAAAGTCTTCCCGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAAIEPRHLIQE*FILGLKVFPHR Trigger: CCTGTGCGGGAAGACTTTGAGGCCAAGAATAAACAACTCCTGGATGAGATGCCGCGGTTCTATGGCAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CAA 72 bp | TATAACCTGTGCCCGGATCAGGGACTCAAAGCTGGGTaGGAAATAGTCAAGTCGGCTGCCATAGAACCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: YNLCPDQGLKAG*EIVKSAAIEPR Trigger: CCGCGGTTCTATGGCAGCCGACTTGACTATTTCCAACCCAGCTTTGAGTCCCTGATCCGGGCACAGGTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CAA 72 bp | TCAGCCACGATGGAGAGGGCTCGGAGTTCACTTAGTTaGGTCTCATTTTCCCGCTCTCGCTGCTCATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SATMERARSSLS*VSFSRSRCSSE Trigger: CTCAGATGAGCAGCGAGAGCGGGAAAATGAGACCAAACTAAGTGAACTCCGAGCCCTCTCCATCGTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 72 bp | GGGACTCAAAGCTGGGTTGGAAATAGTCAAGTCGGCTaGCATAGAACCGCGGCATCTCATCCAGGAGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GTQSWVGNSQVG*HRTAASHPGVV Trigger: AACAACTCCTGGATGAGATGCCGCGGTTCTATGGCAGCCGACTTGACTATTTCCAACCCAGCTTTGAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS GCA 72 bp | TCTCGCTGCTCATCTGAGTGGCCTGGCTGGTCAAGCTaGTGGGTCAGGTCTCCAAAGATCTTATGCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRCSSEWPGWSS*WVRSPKILCIS Trigger: AGAAATGCATAAGATCTTTGGAGACCTGACCCAGCAGCTTGACCAGCCAGGCCACTCAGATGAGCAGCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
||
| CDS CAA 90 bp | GCTGTCACCATGTGCAGAAAGTCCTGGTCCTGCTCACACAGTGGGTaGGACAGTAGGTCCTGGGATATCTTCACAGCAGATTTGGACATG | + |
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Preference number: 6 (lower is better) Translates to: AVTMCRKSWSCSHSG*DSRSWDIFTADLDM Trigger: CATGTCCAAATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACATGGTGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS CCA 72 bp | TGGACAGTAGGTCCTGGGATATCTTCACAGCAGATTTaGACATGGCCAGGTCGGCATCGGTGCTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: WTVGPGISSQQI*TWPGRHRCFSS Trigger: TGAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAAATCTGCTGTGAAGATATCCCAGGACCTACTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS CCA 72 bp | TGTGCAGAAAGTCCTGGTCCTGCTCACACAGTGGGTTaGACAGTAGGTCCTGGGATATCTTCACAGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: CAESPGPAHTVG*TVGPGISSQQI Trigger: AATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS CCA 72 bp | AGAACCGCGGCATCTCATCCAGGAGTTGTTTATTCTTaGCCTCAAAGTCTTCCCGCACAGGACGTAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RTAASHPGVVYS*PQSLPAQDVAL Trigger: AAGAGCTACGTCCTGTGCGGGAAGACTTTGAGGCCAAGAATAAACAACTCCTGGATGAGATGCCGCGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS CAA 72 bp | TTGGACAGTAGGTCCTGGGATATCTTCACAGCAGATTaGGACATGGCCAGGTCGGCATCGGTGCTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LDSRSWDIFTAD*DMARSASVLFF Trigger: GAAGAAAAGCACCGATGCCGACCTGGCCATGTCCAAATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS CAA 72 bp | ATGTGCAGAAAGTCCTGGTCCTGCTCACACAGTGGGTaGGACAGTAGGTCCTGGGATATCTTCACAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: MCRKSWSCSHSG*DSRSWDIFTAD Trigger: ATCTGCTGTGAAGATATCCCAGGACCTACTGTCCAACCCACTGTGTGAGCAGGACCAGGACTTTCTGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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| CDS CCA 72 bp | AACTTTTTCAGAGGTTCAATCACTGTCTTTTGGATCTaGTTCACCTTCTCCTGGTTGAAGGCATCCATCCGT | + |
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Preference number: 6 (lower is better) Translates to: NFFRGSITVFWI*FTFSWLKASIR Trigger: ACGGATGGATGCCTTCAACCAGGAGAAGGTGAACCAGATCCAAAAGACAGTGATTGAACCTCTGAAAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022680.9 |
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