Pregenerated sensors for BIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098112Ensembl transcript IDs: ENSMUST00000182068.8, ENSMUST00000182574.2, ENSMUST00000182775.8, ENSMUST00000182814.8, ENSMUST00000183211.8, ENSMUST00000238935.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCAGCAATaGCGGGCGGGTCTCCGAGGGCACGTATTCACACTGCCTGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: CVWCPPPSGWCRLQQ*RAGLRGHVFTLPEH Trigger: GTGCTCAGGCAGTGTGAATACGTGCCCTCGGAGACCCGCCCGCCATTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTaGTGCAGACTCCAGCAATGGCGGGCGGGTCTCCGAGGGCACGTA | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVWCPPPSG*CRLQQWRAGLRGHV Trigger: TACGTGCCCTCGGAGACCCGCCCGCCATTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACACACACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 90 bp | CAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTaGCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: QVSGWLDACPLTVRT*LRKLFFGIITALLL Trigger: TAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 90 bp | AAATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATaGATGTCCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: KCFSFNSLPSEWLAG*MSSDRADVPKEAFL Trigger: AAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 90 bp | AACCATACTTTATTTAGTAGTGAAAATGTTTTAGCTTTAACTCTTTaGCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGG | + |
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Preference number: 1 (lower is better) Translates to: NHTLFSSENVLALTL*QVSGWLDACPLTVR Trigger: CCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATTTTCACTACTAAATAAAGTATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCACGTATTCACACTGCCTaGGCACGTGGCTTGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVVPSSLRLVQTPRIHTA*ARGLDV Trigger: CACATCCAAGCCACGTGCTCAGGCAGTGTGAATACG...TGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCGTGTGTGTGTGTGTGTaGTGCCCTCCTCCCTCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLTVRTCLRKLFFGIITAVCVCV*CPPPSG Trigger: GCCGGAGGGAGGAGGGCACCACACACACACACACAC...GGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGGTGTGTGTGTGTGTGTaGTGCCCTCCTCCCTCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: VLALTLCQVSGWLDACPLVCVCV*CPPPSG Trigger: GCCGGAGGGAGGAGGGCACCACACACACACACACAC...CAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCGTGTGTGTGCCTTGGCCCTCTGCTTaGGAAACTTCTCTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALLLLLLLKPLIKRSVCVPWPSA*ETSLGR Trigger: CCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGG...CACACACACGGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTGCGCATTATTACAGCCCTaGTTCTATTATTACTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LCQVSGWLDACPLTVRTCALLQP*FYYYCS Trigger: TGAGCAGTAATAATAGAAGCAGGGCTGTAATAATGC...GCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR CCA 90 bp | ATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCGTGTGTGTGTGTGTGTaGTGCCCTCCTCCCTCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: IITALLLLLLLKPLIKRSVCVCV*CPPPSG Trigger: GCCGGAGGGAGGAGGGCACCACACACACACACACAC...GGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTATTACTGCTCCTTGGCCCTCTGCTTaGGAAACTTCTCTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PKEAFLWHYYSPASIITAPWPSA*ETSLGR Trigger: CCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGG...AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR TCA 90 bp | ATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCCGTATTCACACTGCCTaGGCACGTGGCTTGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: IITALLLLLLLKPLIKRSRIHTA*ARGLDV Trigger: CACATCCAAGCCACGTGCTCAGGCAGTGTGAATACG...GGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTGCATTATTACAGCCCTaGTTCTATTATTACTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: NVLALTLCQVSGWLDACPALLQP*FYYYCS Trigger: TGAGCAGTAATAATAGAAGCAGGGCTGTAATAATGC...AGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTaGAGACTCCAGCAATGGCGGGCGGGTCTCCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVWCPPPSGW*RLQQWRAGLRG Trigger: CCCTCGGAGACCCGCCCGCCATTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTaGTGCAGACTCCAGCAATGGCGGGCGGGTCTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVWCPPPSG*CRLQQWRAGLR Trigger: TCGGAGACCCGCCCGCCATTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 72 bp | AATGGCGGGCGGGTCTCCGAGGGCACGTATTCACACTaGCTGAGCACGTGGCTTGGATGTGGCTTGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: NGGRVSEGTYSH*LSTWLGCGLYP Trigger: AGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATACGTGCCCTCGGAGACCCGCCCGCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTaGCCTCCTCCCTCCGGCTGGTGCAGACTCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVW*PPPSGWCRLQQ Trigger: TTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*CPPPSGWCRLQ Trigger: CTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 72 bp | GGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTaGCTAAGGAAGCTTTTCTTTGGCATTATTACAGCC | + |
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Preference number: 3 (lower is better) Translates to: GWLDACPLTVRT*LRKLFFGIITA Trigger: GGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR GCA 72 bp | AGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATaGATGTCCTCTGACCGTGCGGACGTGCCTAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SFNSLPSEWLAG*MSSDRADVPKE Trigger: TTCCTTAGGCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR CCA 72 bp | TCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTaGCATTATTACAGCCCTGCTTCTATTATTACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SDRADVPKEAFL*HYYSPASIITA Trigger: AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR TCA 90 bp | ACGTATTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCGCAGGACCCGCTGCCTaGGGCTCTGGGTGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TYSHCLSTWLGCGLYPWPAGPAA*GSGWRR Trigger: CCTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGC...GGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTGCGTGGCGGAGGCCTGCTaGGCGGAGCTGACGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LCQVSGWLDACPLTVRTCVAEAC*AELTSS Trigger: AGAGGACGTCAGCTCCGCCCAGCAGGCCTCCGCCAC...GCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCAGGGGCTGCACAGCTGTaGAGAACCCTCTGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVVPSSLRLVQTPGAAQL*RTLWRA Trigger: GGCTCTCCAGAGGGTTCTTCACAGCTGTGCAGCCCC...TGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR TCA 90 bp | TCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTCCTGCTGGGCGGAGCTaGCGTCCTCTGGATGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SHCLSTWLGCGLYPWPSAPAGRS*RPLDGC Trigger: GCATCCATCCAGAGGACGTCAGCTCCGCCCAGCAGG...AGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR TCA 90 bp | CACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGCAGGACCCGCTGCCTaGGGCTCTGGGTGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HVAWMWLVPLALCLRNFSAGPAA*GSGWRR Trigger: CCTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGC...AGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR TCA 90 bp | TCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTGCAGGACCCGCTGCCTaGGGCTCTGGGTGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SKAQMFNPSTLEGQVDLCAGPAA*GSGWRR Trigger: CCTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGC...ACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR TCA 90 bp | TTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCGGGGCTGCACAGCTGTaGAGAACCCTCTGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: FTLPEHVAWMWLVPLALCGAAQL*RTLWRA Trigger: GGCTCTCCAGAGGGTTCTTCACAGCTGTGCAGCCCC...GCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCATCTTTTGCTCTGCTCTaGTCCCTCGCTGGAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVVPSSLRLVQTPSFALL*SLAGGS Trigger: CGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGA...TGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCCATTGCAGGACCCGCTaGCTGAGGCTCTGGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVWCPPPSHCRTR*LRLWVA Trigger: CGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATG...GGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCAGCAATCTTCTGCATCTGCTTaGCGAAGAGGCCAGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVWCPPPSGWCRLQQSSASA*RRGQPL Trigger: GAGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGA...TTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CCA 90 bp | AATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCCTGGTGGCGGAGGCCTGCTaGGCGGAGCTGACGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPSTLEGQVDLCKFQDSLVAEAC*AELTSS Trigger: AGAGGACGTCAGCTCCGCCCAGCAGGCCTCCGCCAC...CAGGCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR TCA 90 bp | GGGCACGTATTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCGGAGACTGAGCTaGGGAGCTCAGAGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GHVFTLPEHVAWMWLVPLARRLS*GAQSFL Trigger: GAGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGC...CAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATACGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR GCA 90 bp | TTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCGCCTTCAGGTCCTCATaGCCATCCCAGTCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FTLPEHVAWMWLVPLALCAFRSS*PSQSLL Trigger: CAGCAGCGACTGGGATGGGCATGAGGACCTGAAGGC...GCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR GCA 90 bp | CTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTGCGCTGCTCTTTTGCTCTaGTCTGCTCCCTCGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LCQVSGWLDACPLTVRTCAALLL*SAPSLE Trigger: CTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGC...GCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CCA 90 bp | CTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTTGGCAGTTTCTCGTGGCGGAGGCCTGCTaGGCGGAGCTGACGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LCLRNFSGQASLGPWQFLVAEAC*AELTSS Trigger: AGAGGACGTCAGCTCCGCCCAGCAGGCCTCCGCCAC...GAGAAACTGCCAAGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| 3UTR CAA 72 bp | CTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTaGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LPEHVAWMWLVP*ALCLRNFSGQA Trigger: CGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCGGGGCTGCACAGCTGTaGAGAACCCTCTGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSKAQMFNPSTLEGQVDLGAAQL*RTLWRA Trigger: GGCTCTCCAGAGGGTTCTTCACAGCTGTGCAGCCCC...GAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGTCTTCTGCATCTGCTTaGCGAAGAGGCCAGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVVPSSLRSSASA*RRGQPL Trigger: GAGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGA...CCGGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCATTAGAAGAGGCGTCTaGGGAGGCCCTGGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVWCPPPSIRRGV*GGPGAA Trigger: TGCAGCCCCAGGGCCTCCCCAGACGCCTCTTCTAAT...GGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CCA 90 bp | GTATTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCATTAGAAGAGGCGTCTaGGGAGGCCCTGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFTLPEHVAWMWLVPLALIRRGV*GGPGAA Trigger: TGCAGCCCCAGGGCCTCCCCAGACGCCTCTTCTAAT...GAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR TCA 90 bp | CACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGCCCGGAGACTGAGCTaGGGAGCTCAGAGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVAWMWLVPLALCLRNFSARRLS*GAQSFL Trigger: GAGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGC...AGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTTGGCAGTTTCTCGGGGCTGCACAGCTGTaGAGAACCCTCTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRNFSGQASLGPWQFLGAAQL*RTLWRA Trigger: GGCTCTCCAGAGGGTTCTTCACAGCTGTGCAGCCCC...GAGAAACTGCCAAGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACGTATTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGTCTTTTGCTCTGCTCTaGTCCCTCGCTGGAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GHVFTLPEHVAWMWLVPLSFALL*SLAGGS Trigger: CGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGA...CAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATACGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTCATTGCAGGACCCGCTaGCTGAGGCTCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKAQMFNPSTLEGQVDLCHCRTR*LRLWVA Trigger: CGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATG...ACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTGCGGAGCTGACGTCCTCTaGATGGATGCTGCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCQVSGWLDACPLTVRTCGADVL*MDAALL Trigger: CAAAAGAGCAGCATCCATCCAGAGGACGTCAGCTCC...GCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTTGAGACCTTCTGCCTTCTCCTaGGCCCTGCTGAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPEHVAWMWLVPLALCLRPSAFS*ALLNFF Trigger: GAAGAAGTTCAGCAGGGCCCAGGAGAAGGCAGAAGG...TCTCAAGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182814.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTGCCCGGAGACTGAGCTaGGGAGCTCAGAGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAQMFNPSTLEGQVDLCARRLS*GAQSFL Trigger: GAGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGC...ACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR TCA 90 bp | CGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTAGCAGGACCCGCTGCCTaGGGCTCTGGGTGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTCLRKLFFGIITALLLLAGPAA*GSGWRR Trigger: CCTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGC...TAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | GTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTAGTGGCGGAGGCCTGCTaGGCGGAGCTGACGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRTCLRKLFFGIITALLLVAEAC*AELTSS Trigger: AGAGGACGTCAGCTCCGCCCAGCAGGCCTCCGCCAC...TAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCACCCTCTGGAGAGCCTaGGGCATTGCAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTVRTCLRKLFFGIITATLWRA*GIAGPA Trigger: AGCGGGTCCTGCAATGCCCCAGGCTCTCCAGAGGGT...GGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | TCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTCATTGTTCCCCACAATaGCCTTCAGGTCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHCLSTWLGCGLYPWPSAHCSPQ*PSGPHA Trigger: GGCATGAGGACCTGAAGGCCATTGTGGGGAACAATG...AGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTGTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAACTTCTTCTGCATCTaGTTGGCGAAGAGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VACTLGPLLEKLLWAGELNFFCI*LAKRPA Trigger: GGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAAGTT...AAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | TCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTCTGCTGAACTTCTTCTaGATCTGCTTGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHCLSTWLGCGLYPWPSALLNFF*ICLAKR Trigger: CCTCTTCGCCAAGCAGATGCAGAAGAAGTTCAGCAG...AGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTTGAGAGCTGAAGTCTTCTTCTaGCTTAGCCATCTTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPEHVAWMWLVPLALCLRAEVFF*LSHLGV Trigger: GACGCCAAGATGGCTAAGGCAGAAGAAGACTTCAGC...TCTCAAGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTTGGCAGTTTCTCTCTTTTGCTCTGCTCTaGTCCCTCGCTGGAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRNFSGQASLGPWQFLSFALL*SLAGGS Trigger: CGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGA...GAGAAACTGCCAAGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTACCCTCTGGAGAGCCTaGGGCATTGCAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVRTCLRKLFFGIITALLTLWRA*GIAGPA Trigger: AGCGGGTCCTGCAATGCCCCAGGCTCTCCAGAGGGT...AAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACACCCTCTGGAGAGCCTaGGGCATTGCAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MFNPSTLEGQVDLCKFQDTLWRA*GIAGPA Trigger: AGCGGGTCCTGCAATGCCCCAGGCTCTCCAGAGGGT...GTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCATTAGAAGAGGCGTCTaGGGAGGCCCTGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FNPSTLEGQVDLCKFQDSIRRGV*GGPGAA Trigger: TGCAGCCCCAGGGCCTCCCCAGACGCCTCTTCTAAT...GCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTGTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTCATTGTTCCCCACAATaGCCTTCAGGTCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VACTLGPLLEKLLWAGELHCSPQ*PSGPHA Trigger: GGCATGAGGACCTGAAGGCCATTGTGGGGAACAATG...AAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCGGAGCGCCGGCTGCTTaGCAGGCCCTTCACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: AQMFNPSTLEGQVDLCKFGAPAA*QALHHK Trigger: TTTGTGGTGAAGGGCCTGTCAAGCAGCCGGCGCTCC...GAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | GTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTCTGCTGAACTTCTTCTaGATCTGCTTGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLALCLRNFSGQASLGPLLNFF*ICLAKR Trigger: CCTCTTCGCCAAGCAGATGCAGAAGAAGTTCAGCAG...AGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTGTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTGTTTTCCCCAATTTCTaGAGAACCTTCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VACTLGPLLEKLLWAGELVFPNF*RTFSWA Trigger: GGCCCAGGAGAAGGTTCTGCAGAAATTGGGGAAAAC...AAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182775.8 ENSMUST00000183211.8 |
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| CDS-3UTR GCA 90 bp | GGGCACGTATTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGTTTTCCCCAATTTCTaGAGAACCTTCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHVFTLPEHVAWMWLVPLVFPNF*RTFSWA Trigger: GGCCCAGGAGAAGGTTCTGCAGAAATTGGGGAAAAC...CAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATACGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182775.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCCTTCAGGTCCTCATaGCCATCCCAGTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLIPALWRGRWISVNSRTAFRSS*PSQSLL Trigger: CAGCAGCGACTGGGATGGGCATGAGGACCTGAAGGC...TGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGCTGAAGTCTTCTTCTaGCTTAGCCATCTTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVWCPPPSAEVFF*LSHLGV Trigger: GACGCCAAGATGGCTAAGGCAGAAGAAGACTTCAGC...GGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCGCTGCTCTTTTGCTCTaGTCTGCTCCCTCGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTVRTCLRKLFFGIITAAALLL*SAPSLE Trigger: CTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGC...GGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCCCTCTGGATGGATGCTaGTCTTTTGCTCTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKAQMFNPSTLEGQVDLPLDGC*SFALLC Trigger: GCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGG...GAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTTCTTCTGCATCTGCTTaGCGAAGAGGCCAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAQMFNPSTLEGQVDLCSSASA*RRGQPL Trigger: GAGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGA...ACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCACTCTTTGAGCTTTCATaGATCACTTTGACTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVVPSSLRLVQTPLFELS*ITLTAL Trigger: TAGTGCAGTCAAAGTGATGCATGAAAGCTCAAAGAG...TGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTTGGCAGTTTCTCCCTCTGGATGGATGCTaGTCTTTTGCTCTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRNFSGQASLGPWQFLPLDGC*SFALLC Trigger: GCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGG...GAGAAACTGCCAAGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | CGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTACATTGCAGGACCCGCTaGCTGAGGCTCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RTCLRKLFFGIITALLLLHCRTR*LRLWVA Trigger: CGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATG...TAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCAACCAGACCCCCACTTaGCTGGGTGGCGCTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQMFNPSTLEGQVDLCKFNQTPT*LGGALG Trigger: ACCAAGAGCGCCACCCAGGCAAGTGGGGGTCTGGTT...GAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTTGGCAGTTTCTCGGAGCTGACGTCCTCTaGATGGATGCTGCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRNFSGQASLGPWQFLGADVL*MDAALL Trigger: CAAAAGAGCAGCATCCATCCAGAGGACGTCAGCTCC...GAGAAACTGCCAAGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGAGCTGACGTCCTCTaGATGGATGCTGCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVAWMWLVPLALCLRNFSGADVL*MDAALL Trigger: CAAAAGAGCAGCATCCATCCAGAGGACGTCAGCTCC...AGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATCTTTTGCTCTGCTCTaGTCCCTCGCTGGAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KAQMFNPSTLEGQVDLCKSFALL*SLAGGS Trigger: CGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGA...TTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAAGCTGCTCTTTTGCTCTaGTCTGCTCCCTCGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAQMFNPSTLEGQVDLCKAALLL*SAPSLE Trigger: CTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGC...TTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCCATTGTTCCCCACAATaGCCTTCAGGTCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNPSTLEGQVDLCKFQDSHCSPQ*PSGPHA Trigger: GGCATGAGGACCTGAAGGCCATTGTGGGGAACAATG...GCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAAAATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCAGCCCGGAGACTGAGCTaGGGAGCTCAGAGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SENVLALTLCQVSGWLDAARRLS*GAQSFL Trigger: GAGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGC...TGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTGTTTTCCCCAATTTCTaGAGAACCTTCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAQMFNPSTLEGQVDLCVFPNF*RTFSWA Trigger: GGCCCAGGAGAAGGTTCTGCAGAAATTGGGGAAAAC...ACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTGCCTTCAGGTCCTCATaGCCATCCCAGTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVLALTLCQVSGWLDACPAFRSS*PSQSLL Trigger: CAGCAGCGACTGGGATGGGCATGAGGACCTGAAGGC...AGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCGCTGAAGTCTTCTTCTaGCTTAGCCATCTTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNPSTLEGQVDLCKFQDSAEVFF*LSHLGV Trigger: GACGCCAAGATGGCTAAGGCAGAAGAAGACTTCAGC...GCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTATTAGAAGAGGCGTCTaGGGAGGCCCTGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVLALTLCQVSGWLDACPIRRGV*GGPGAA Trigger: TGCAGCCCCAGGGCCTCCCCAGACGCCTCTTCTAAT...AGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCGGTTTCTGCTGGTTCTaGATTAGAAGAGGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FNPSTLEGQVDLCKFQDSGFCWF*IRRGVW Trigger: CCAGACGCCTCTTCTAATCCAGAACCAGCAGAAACC...GCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTTCTCTGGTTTCTGCTaGTTCTGGATTAGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKAQMFNPSTLEGQVDLFSGFC*FWIRRG Trigger: GCCTCTTCTAATCCAGAACCAGCAGAAACCAGAGAA...GAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAAAACTTCTTCTGCATCTaGTTGGCGAAGAGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQMFNPSTLEGQVDLCKNFFCI*LAKRPA Trigger: GGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAAGTT...TTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTATTACTGCTCATTGCAGGACCCGCTaGCTGAGGCTCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PKEAFLWHYYSPASIITAHCRTR*LRLWVA Trigger: CGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATG...AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | GTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTTCTTCAAATACAATCTaGGCCTTGCTGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLALCLRNFSGQASLGPSSNTI*ALLKSS Trigger: AGAAGACTTCAGCAAGGCCCAGATTGTATTTGAAGA...AGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCGAGCTTGTTTCTGACTaGGCTTCATCCGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTVRTCLRKLFFGIITAELVSD*ASSASS Trigger: TGAAGAAGCGGATGAAGCCCAGTCAGAAACAAGCTC...GGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTGAGCTTGTTTCTGACTaGGCTTCATCCGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKAQMFNPSTLEGQVDLCELVSD*ASSASS Trigger: TGAAGAAGCGGATGAAGCCCAGTCAGAAACAAGCTC...ACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCGGAGCTGACGTCCTCTaGATGGATGCTGCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQMFNPSTLEGQVDLCKFGADVL*MDAALL Trigger: CAAAAGAGCAGCATCCATCCAGAGGACGTCAGCTCC...GAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCACCCTCTGGAGAGCCTaGGGCATTGCAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IITALLLLLLLKPLIKRSTLWRA*GIAGPA Trigger: AGCGGGTCCTGCAATGCCCCAGGCTCTCCAGAGGGT...GGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGGTTTCTGCTGGTTCTaGATTAGAAGAGGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDRADVPKEAFLWHYYSPGFCWF*IRRGVW Trigger: CCAGACGCCTCTTCTAATCCAGAACCAGCAGAAACC...AGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | AATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCCTGCTCTTTGAGCTTTCATaGATCACTTTGACTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: NPSTLEGQVDLCKFQDSLLFELS*ITLTAL Trigger: TAGTGCAGTCAAAGTGATGCATGAAAGCTCAAAGAG...CAGGCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCGTGTGTGTGGCTGAAGTCTTCTTCTaGCTTAGCCATCTTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLLLLLKPLIKRSVCVAEVFF*LSHLGV Trigger: GACGCCAAGATGGCTAAGGCAGAAGAAGACTTCAGC...CACACACACGGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | GGCATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCTTCTGCATCTGCTTaGCGAAGAGGCCAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GIITALLLLLLLKPLIKRSSASA*RRGQPL Trigger: GAGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGA...GCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCGCCTTCCTTTTCTCTaGTTTCTGCTGGTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVRTCLRKLFFGIITALLRLPFL*FLLVLD Trigger: ATCCAGAACCAGCAGAAACCAGAGAAAAGGAAGGCG...AAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTACACATAATTCTCCATaGTCCTCAAGGCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVRTCLRKLFFGIITALLTHNSP*SSRPGQ Trigger: CTGACCAGGCCTTGAGGACCATGGAGAATTATGTGT...AAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAACACATAATTCTCCATaGTCCTCAAGGCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLIPALWRGRWISVNSRTTHNSP*SSRPGQ Trigger: CTGACCAGGCCTTGAGGACCATGGAGAATTATGTGT...TGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | CGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTACCTCTGGATGGATGCTaGTCTTTTGCTCTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTCLRKLFFGIITALLLLPLDGC*SFALLC Trigger: GCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGG...TAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTTTCTCTGGTTTCTGCTaGTTCTGGATTAGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVRTCLRKLFFGIITALLFSGFC*FWIRRG Trigger: GCCTCTTCTAATCCAGAACCAGCAGAAACCAGAGAA...AAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACCGCCTTCCTTTTCTCTaGTTTCTGCTGGTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MSSDRADVPKEAFLWHYYRLPFL*FLLVLD Trigger: ATCCAGAACCAGCAGAAACCAGAGAAAAGGAAGGCG...GTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCGCCTTCCTTTTCTCTaGTTTCTGCTGGTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQMFNPSTLEGQVDLCKFRLPFL*FLLVLD Trigger: ATCCAGAACCAGCAGAAACCAGAGAAAAGGAAGGCG...GAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAAAATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCAAACTTCTTCTGCATCTaGTTGGCGAAGAGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SENVLALTLCQVSGWLDANFFCI*LAKRPA Trigger: GGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAAGTT...TGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATTTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | GGCATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTGCAGAACCTTCTCCTaGGCCCTGCTGAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIITALLLLLLLKPLIKRCRTFS*ALLNFF Trigger: GAAGAAGTTCAGCAGGGCCCAGGAGAAGGTTCTGCA...GCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182775.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCTCTTCAAATACAATCTaGGCCTTGCTGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNPSTLEGQVDLCKFQDSSSNTI*ALLKSS Trigger: AGAAGACTTCAGCAAGGCCCAGATTGTATTTGAAGA...GCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTGGTTTCTGCTGGTTCTaGATTAGAAGAGGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVLALTLCQVSGWLDACPGFCWF*IRRGVW Trigger: CCAGACGCCTCTTCTAATCCAGAACCAGCAGAAACC...AGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCCCTCTGGATGGATGCTaGTCTTTTGCTCTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IITALLLLLLLKPLIKRSPLDGC*SFALLC Trigger: GCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGG...GGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCGTGGAGCTTGTTTCTGACTaGGCTTCATCCGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITALLLLLLLKPLIKRSVELVSD*ASSASS Trigger: TGAAGAAGCGGATGAAGCCCAGTCAGAAACAAGCTC...CACGGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTAACACATAATTCTCCATaGTCCTCAAGGCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTCLRKLFFGIITALLLLTHNSP*SSRPGQ Trigger: CTGACCAGGCCTTGAGGACCATGGAGAATTATGTGT...TAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGCTCTTTGAGCTTTCATaGATCACTTTGACTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VLALTLCQVSGWLDACPLLFELS*ITLTAL Trigger: TAGTGCAGTCAAAGTGATGCATGAAAGCTCAAAGAG...CAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTTTCTCTGGTTTCTGCTaGTTCTGGATTAGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLALTLCQVSGWLDACPFSGFC*FWIRRG Trigger: GCCTCTTCTAATCCAGAACCAGCAGAAACCAGAGAA...AGGACATGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAAATGTTTTAGCTTTAACTCTTTGCCAAGTGAGTGGCTGGCTGGATGCACGCCTTCCTTTTCTCTaGTTTCTGCTGGTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SENVLALTLCQVSGWLDARLPFL*FLLVLD Trigger: ATCCAGAACCAGCAGAAACCAGAGAAAAGGAAGGCG...TGCATCCAGCCAGCCACTCACTTGGCAAAGAGTTAAAGCTAAAACATTTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTATTACTGCTGGTTTCTGCTGGTTCTaGATTAGAAGAGGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKEAFLWHYYSPASIITAGFCWF*IRRGVW Trigger: CCAGACGCCTCTTCTAATCCAGAACCAGCAGAAACC...AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | GGCATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCTTCAAATACAATCTaGGCCTTGCTGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIITALLLLLLLKPLIKRSSNTI*ALLKSS Trigger: AGAAGACTTCAGCAAGGCCCAGATTGTATTTGAAGA...GCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTATTACTGCTCTCTTTGAGCTTTCATaGATCACTTTGACTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: PKEAFLWHYYSPASIITALFELS*ITLTAL Trigger: TAGTGCAGTCAAAGTGATGCATGAAAGCTCAAAGAG...AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTATTACTGCTTCTTCAAATACAATCTaGGCCTTGCTGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKEAFLWHYYSPASIITASSNTI*ALLKSS Trigger: AGAAGACTTCAGCAAGGCCCAGATTGTATTTGAAGA...AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS GCA 90 bp | TGGGGCTGCACAGCTGTGAAGAACCCTCTGGAGAGCCTGGGGCATTaGAGGACCCGCTGCCTGAGGCTCTGGGTGGCGGAGGCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGCTAVKNPLESLGH*RTRCLRLWVAEACW Trigger: CCAGCAGGCCTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATGCCCCAGGCTCTCCAGAGGGTTCTTCACAGCTGTGCAGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
||
| CDS GCA 90 bp | CTGGGCGGAGCTGACGTCCTCTGGATGGATGCTGCTCTTTTGCTCTaGTCTGCTCCCTCGCTGGAGGCTCGGGCACGGAGGACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: LGGADVLWMDAALLL*SAPSLEARARRTTS Trigger: GGATGTGGTCCTCCGTGCCCGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGGACGTCAGCTCCGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCAGCAATGGCGGGCGGGAGGCTGCACAGCTTaGTACTGGGGGAGAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CVWCPPPSGWCRLQQWRAGGCTA*YWGRDD Trigger: GTCATCTCTCCCCCAGTACAAAGCTGTGCAGCCTCC...CGCCCGCCATTGCTGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS GCA 90 bp | GGACCACATCCCCCGGGGAAGGAGTATCCTTCCCTGTCTGACCTCTaGCCGGAGACTGAGCTGAGGAGCTCAGAGCTTCCTCCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GPHPPGKEYPSLSDL*PETELRSSELPPGI Trigger: GATCCCAGGAGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGCAGAGGTCAGACAGGGAAGGATACTCCTTCCCCGGGGGATGTGGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
||
| CDS-3UTR CAA 90 bp | TCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTAGTTTCCGGCCCCGCTaGGCAATCCTCTCCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SHCLSTWLGCGLYPWPSASFRPR*AILSPT Trigger: TGTGGGGGAGAGGATTGCCAAGCGGGGCCGGAAACT...AGCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182775.8 |
||
| CDS CCA 90 bp | GGTGATGGCGGGCACTATCGTAGTCTACCAGTTTCCGGCCCCGCTTaGCAATCCTCTCCCCCACAATGGCCTTCAGGTCCTCATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GDGGHYRSLPVSGPA*QSSPPQWPSGPHAH Trigger: ATGGGCATGAGGACCTGAAGGCCATTGTGGGGGAGAGGATTGCCAAGCGGGGCCGGAAACTGGTAGACTACGATAGTGCCCGCCATCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182775.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCAAGTGAGTGGCTGGCTGGATGCATGTCCTCTGACCGTGCGGACGTGCTTCTTCTGCATCTGCTaGGCGAAGAGGCCAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCQVSGWLDACPLTVRTCFFCIC*AKRPAA Trigger: AGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAA...GCACGTCCGCACGGTCAGAGGACATGCATCCAGCCAGCCACTCACTTGGCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCGGAGGCTGCACAGCTTaGTACTGGGGGAGAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: VFTLPEHVAWMWLVPLALGGCTA*YWGRDD Trigger: GTCATCTCTCCCCCAGTACAAAGCTGTGCAGCCTCC...GAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGAGGCTGCACAGCTTaGTACTGGGGGAGAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVWCPPPSGGCTA*YWGRDD Trigger: GTCATCTCTCCCCCAGTACAAAGCTGTGCAGCCTCC...GGAGGGAGGAGGGCACCACACACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | TTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCATGGATGCTGCTCTTTaGCTCTGCTCTGCTCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: FTLPEHVAWMWLVPLALCMDAAL*LCSAPS Trigger: CGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCAT...GCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGGTGCCCTCCTCCCTCCGGCTGGTGCAGACTCCATCTGCCTTAGCCATCTaGGCGTCATCCTTCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: VCVCVCVVPSSLRLVQTPSALAI*ASSFFL Trigger: TAAGAAGAAGGATGACGCCAAGATGGCTAAGGCAGA...TGGAGTCTGCACCAGCCGGAGGGAGGAGGGCACCACACACACACACACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | GTACCCTTGGCCCTCTGCTTGAGAAACTTCTCTGGGCAGGCGAGCTTAGGTCCTATGGATGCTGCTCTTTaGCTCTGCTCTGCTCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: VPLALCLRNFSGQASLGPMDAAL*LCSAPS Trigger: CGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCAT...AGGACCTAAGCTCGCCTGCCCAGAGAAGTTTCTCAAGCAGAGGGCCAAGGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCAAGGCTCAAATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCATGGATGCTGCTCTTTaGCTCTGCTCTGCTCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GSKAQMFNPSTLEGQVDLMDAAL*LCSAPS Trigger: CGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCAT...GAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACATTTGAGCCTTGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS TCA 90 bp | GTTTCTGACTGGGCTTCATCCGCTTCTTCATCCTTTAAGGACTCTTaGCTCTCACAGCTGTCCTCTCCCCCTGCCTCAGAGGTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VSDWASSASSSFKDS*LSQLSSPPASEVSS Trigger: GGAGCTGACCTCTGAGGCAGGGGGAGAGGACAGCTGTGAGAGTCAAGAGTCCTTAAAGGATGAAGAAGCGGATGAAGCCCAGTCAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS-3UTR CAA 90 bp | TTCACACTGCCTGAGCACGTGGCTTGGATGTGGCTTGTACCCTTGGCCCTCTGCTCTGCCTTAGCCATCTaGGCGTCATCCTTCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: FTLPEHVAWMWLVPLALCSALAI*ASSFFL Trigger: TAAGAAGAAGGATGACGCCAAGATGGCTAAGGCAGA...GCAGAGGGCCAAGGGTACAAGCCACATCCAAGCCACGTGCTCAGGCAGTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | TCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTTTCTTCTGCATCTGCTaGGCGAAGAGGCCAGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SDRADVPKEAFLWHYYSPFFCIC*AKRPAA Trigger: AGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAA...AGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACTTCTTCTGCATCTGCTaGGCGAAGAGGCCAGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: MFNPSTLEGQVDLCKFQDFFCIC*AKRPAA Trigger: AGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAA...GTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGGAGGCTGCACAGCTTaGTACTGGGGGAGAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: CLIPALWRGRWISVNSRTGGCTA*YWGRDD Trigger: GTCATCTCTCCCCCAGTACAAAGCTGTGCAGCCTCC...TGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR CAA 90 bp | ATGTCCTCTGACCGTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACTTCTTCTGCATCTGCTaGGCGAAGAGGCCAGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: MSSDRADVPKEAFLWHYYFFCIC*AKRPAA Trigger: AGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAA...GTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCACGGTCAGAGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | TTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACAGCTCCCAAAGGAGGTCATaGTTCCCCACAATGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FNPSTLEGQVDLCKFQDSSQRRS*FPTMAF Trigger: GAAGGCCATTGTGGGGAACAATGACCTCCTTTGGGA...GCTGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR CAA 90 bp | GCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCGTGTGTGTGATGGATGCTGCTCTTTaGCTCTGCTCTGCTCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: ALLLLLLLKPLIKRSVCVMDAAL*LCSAPS Trigger: CGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCAT...CACACACACGGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCGTGTGTGTGTCCCAAAGGAGGTCATaGTTCCCCACAATGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ALLLLLLLKPLIKRSVCVSQRRS*FPTMAF Trigger: GAAGGCCATTGTGGGGAACAATGACCTCCTTTGGGA...CACACACACGGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | TGTTTAATCCCAGCACTCTGGAGGGGCAGGTGGATCTCTGTAAATTCCAGGACATCTGCCTTAGCCATCTaGGCGTCATCCTTCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: CLIPALWRGRWISVNSRTSALAI*ASSFFL Trigger: TAAGAAGAAGGATGACGCCAAGATGGCTAAGGCAGA...TGTCCTGGAATTTACAGAGATCCACCTGCCCCTCCAGAGTGCTGGGATTAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238935.2 |
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| CDS-3UTR CAA 90 bp | GTGCGGACGTGCCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTAGAAGTTGCTGGCACTTaGTTCAAATCGCTCGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VRTCLRKLFFGIITALLLEVAGT*FKSLVF Trigger: AAAGACGAGCGATTTGAACAAAGTGCCAGCAACTTC...TAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGGCACGTCCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182775.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGGAAGCTTTTCTTTGGCATTATTACAGCCCTGCTTCTATTATTACTGCTTCCCAAAGGAGGTCATaGTTCCCCACAATGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PKEAFLWHYYSPASIITASQRRS*FPTMAF Trigger: GAAGGCCATTGTGGGGAACAATGACCTCCTTTGGGA...AGCAGTAATAATAGAAGCAGGGCTGTAATAATGCCAAAGAAAAGCTTCCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS-3UTR CAA 90 bp | ATTATTACAGCCCTGCTTCTATTATTACTGCTCAAGCCTCTGATAAAACGCTCCTCTGCCTTAGCCATCTaGGCGTCATCCTTCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: IITALLLLLLLKPLIKRSSALAI*ASSFFL Trigger: TAAGAAGAAGGATGACGCCAAGATGGCTAAGGCAGA...GGAGCGTTTTATCAGAGGCTTGAGCAGTAATAATAGAAGCAGGGCTGTAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 |
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| CDS CCA 72 bp | TGGATGCTGCTCTTTTGCTCTGCTCTGCTCCCTCGCTaGAGGCTCGGGCACGGAGGACCACATCCCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: WMLLFCSALLPR*RLGHGGPHPPG Trigger: CCCCGGGGGATGTGGTCCTCCGTGCCCGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS TCA 72 bp | AGACTCAGGCTCACTGGTCGCAGAGGGGCTAGTGGGTaGGGTCACGGGGCTGACAGGGCTGACAGGGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RLRLTGRRGASG*GHGADRADRAD Trigger: GTCAGCCCTGTCAGCCCTGTCAGCCCCGTGACCTCACCCACTAGCCCCTCTGCGACCAGTGAGCCTGAGTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000182068.8 ENSMUST00000182574.2 ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS TCA 72 bp | TCCCCCTGCCTCAGAGGTCAGCTCCTCTCCCGTGGCTaGGACAGACTCAGGCTCACTGGTCGCAGAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPCLRGQLLSRG*DRLRLTGRRGA Trigger: AGCCCCTCTGCGACCAGTGAGCCTGAGTCTGTCTCAGCCACGGGAGAGGAGCTGACCTCTGAGGCAGGGGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000182068.8 ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS GCA 72 bp | ACAGCTGTGAAGAACCCTCTGGAGAGCCTGGGGCATTaGAGGACCCGCTGCCTGAGGCTCTGGGTGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: TAVKNPLESLGH*RTRCLRLWVAE Trigger: CTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATGCCCCAGGCTCTCCAGAGGGTTCTTCACAGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS GCA 72 bp | CGTCCTCTGGATGGATGCTGCTCTTTTGCTCTGCTCTaGTCCCTCGCTGGAGGCTCGGGCACGGAGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: RPLDGCCSFALL*SLAGGSGTEDH Trigger: GTGGTCCTCCGTGCCCGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS GCA 72 bp | GCTGACGTCCTCTGGATGGATGCTGCTCTTTTGCTCTaGTCTGCTCCCTCGCTGGAGGCTCGGGCACGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ADVLWMDAALLL*SAPSLEARARR Trigger: CCTCCGTGCCCGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGGACGTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS CAA 72 bp | GGCGGAGCTGACGTCCTCTGGATGGATGCTGCTCTTTaGCTCTGCTCTGCTCCCTCGCTGGAGGCTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GGADVLWMDAAL*LCSAPSLEARA Trigger: TGCCCGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCCATCCAGAGGACGTCAGCTCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS GCA 72 bp | CCCCCGGGGAAGGAGTATCCTTCCCTGTCTGACCTCTaGCCGGAGACTGAGCTGAGGAGCTCAGAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPGKEYPSLSDL*PETELRSSELP Trigger: AGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGCAGAGGTCAGACAGGGAAGGATACTCCTTCCCCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS CCA 72 bp | GGGCACTATCGTAGTCTACCAGTTTCCGGCCCCGCTTaGCAATCCTCTCCCCCACAATGGCCTTCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GHYRSLPVSGPA*QSSPPQWPSGP Trigger: AGGACCTGAAGGCCATTGTGGGGGAGAGGATTGCCAAGCGGGGCCGGAAACTGGTAGACTACGATAGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182775.8 |
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| CDS CCA 72 bp | TCCTCGTCCTCCTCCTCTGACGAGCTTGTTTCTGACTaGGCTTCATCCGCTTCTTCATCCTTTAAGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSDELVSD*ASSASSSFKDS Trigger: AGAGTCCTTAAAGGATGAAGAAGCGGATGAAGCCCAGTCAGAAACAAGCTCGTCAGAGGAGGAGGACGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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| CDS GCA 72 bp | TTCAAATACAATCTGGGCCTTGCTGAAGTCTTCTTCTaGCTTAGCCATCTTGGCGTCATCCTTCTTCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: FKYNLGLAEVFF*LSHLGVILLLS Trigger: GCTAAGAAGAAGGATGACGCCAAGATGGCTAAGGCAGAAGAAGACTTCAGCAAGGCCCAGATTGTATTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182775.8 ENSMUST00000182814.8 ENSMUST00000183211.8 ENSMUST00000238935.2 |
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