Pregenerated sensors for BIK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016758Ensembl transcript IDs: ENSMUST00000016902.5, ENSMUST00000229165.2, ENSMUST00000229964.2, ENSMUST00000230912.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAAAGGACTCTAGTCCAGTAGATCCTGTGCCTCAAGGCTTCACAGACAGGGGTGGCACCTCTAGGGGTTaGGGGGCAGGGACCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PKDSSPVDPVPQGFTDRGGTSRG*GAGTSP Trigger: AGGGCTGGTCCCTGCCCCCCAACCCCTAGAGGTGCC...ACCCCTGTCTGTGAAGCCTTGAGGCACAGGATCTACTGGACTAGAGTCCTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGAACTTGCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGGACTCTGGCACCTCTAGGGGTTaGGGGGCAGGGACCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: IELACKHHLIELSTPKDSGTSRG*GAGTSP Trigger: AGGGCTGGTCCCTGCCCCCCAACCCCTAGAGGTGCC...AGAGTCCTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGCAAGTTCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGAGGTACAGTGAATTCATTTGCCTTACAAAAACCCAGAAAACCTGTATGGGCACCTCTAGGGGTTaGGGGGCAGGGACCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLRYSEFICLTKTQKTCMGTSRG*GAGTSP Trigger: AGGGCTGGTCCCTGCCCCCCAACCCCTAGAGGTGCC...CATACAGGTTTTCTGGGTTTTTGTAAGGCAAATGAATTCACTGTACCTCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229964.2 ENSMUST00000230912.2 |
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| CDS-3UTR TCA 90 bp | GAAGGGCCAGCCAAGCCTCAGGGGCACTTAGCCAGTAATGCTCCTGAGGTACAGAGGGTCCTGGTCAGGTaGCACCCAGGCGCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: EGPAKPQGHLASNAPEVQRVLVR*HPGARS Trigger: ACTCCTGGCGCCTGGGTGTCACCTGACCAGGACCCT...CTGTACCTCAGGAGCATTACTGGCTAAGTGCCCCTGAGGCTTGGCTGGCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGGACTCTAGTCCAGTAGATCCTGTGCCTCAAGGCTTCACAGACAGGGGTAGTCTCAGAGGCCACTaGAGGTTGGGGGACCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PKDSSPVDPVPQGFTDRGSLRGH*RLGDLV Trigger: GACCAGGTCCCCCAACCTCCAGTGGCCTCTGAGACT...ACCCCTGTCTGTGAAGCCTTGAGGCACAGGATCTACTGGACTAGAGTCCTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | TTAATTGAACTCTCCACCCCAAAGGACTCTAGTCCAGTAGATCCTGTGCCTCAAGAGGCCACTGGAGGTTaGGGGACCTGGTCGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LIELSTPKDSSPVDPVPQEATGG*GTWSCG Trigger: TCCACACGACCAGGTCCCCCAACCTCCAGTGGCCTC...TTGAGGCACAGGATCTACTGGACTAGAGTCCTTTGGGGTGGAGAGTTCAATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | GCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGGACTCTAGTCCAGTAAGCCTCAAGGCCACCTaGTTTCTGCCTTCCACGCAC | + |
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Preference number: 4 (lower is better) Translates to: ACKHHLIELSTPKDSSPVSLKAT*FLPSTH Trigger: GTGCGTGGAAGGCAGAAACCAGGTGGCCTTGAGGCT...TACTGGACTAGAGTCCTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR TCA 90 bp | CATTTTATTGAACTTGCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGAGGGTCCTGGTCAGGTaGCACCCAGGCGCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HFIELACKHHLIELSTPKRVLVR*HPGARS Trigger: ACTCCTGGCGCCTGGGTGTCACCTGACCAGGACCCT...CTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGCAAGTTCAATAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR TCA 90 bp | CTCCTGAGGTACAGTGAATTCATTTGCCTTACAAAAACCCAGAAAACCTGTATGAGGGTCCTGGTCAGGTaGCACCCAGGCGCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LLRYSEFICLTKTQKTCMRVLVR*HPGARS Trigger: ACTCCTGGCGCCTGGGTGTCACCTGACCAGGACCCT...CATACAGGTTTTCTGGGTTTTTGTAAGGCAAATGAATTCACTGTACCTCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229964.2 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | CTCCTGAGGTACAGTGAATTCATTTGCCTTACAAAAACCCAGAAAACCTGTATGGAGGCCACTGGAGGTTaGGGGACCTGGTCGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLRYSEFICLTKTQKTCMEATGG*GTWSCG Trigger: TCCACACGACCAGGTCCCCCAACCTCCAGTGGCCTC...CATACAGGTTTTCTGGGTTTTTGTAAGGCAAATGAATTCACTGTACCTCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | ATTGAACTTGCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGGACTCTCAGGCTCCTTCATGCTaGGAGTCTCAGAGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: IELACKHHLIELSTPKDSQAPSC*ESQRPL Trigger: CAGTGGCCTCTGAGACTCCCAGCATGAAGGAGCCTG...AGAGTCCTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGCAAGTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | ATTGAACTTGCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGGACTCTAGCCTCAAGGCCACCTaGTTTCTGCCTTCCACGCAC | + |
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Preference number: 4 (lower is better) Translates to: IELACKHHLIELSTPKDSSLKAT*FLPSTH Trigger: GTGCGTGGAAGGCAGAAACCAGGTGGCCTTGAGGCT...AGAGTCCTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGCAAGTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CCA 90 bp | CATTTTATTGAACTTGCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGAGTCTCAGAGGCCACTaGAGGTTGGGGGACCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HFIELACKHHLIELSTPKSLRGH*RLGDLV Trigger: GACCAGGTCCCCCAACCTCCAGTGGCCTCTGAGACT...CTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGCAAGTTCAATAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCAGCCAAGCCTCAGGGGCACTTAGCCAGTAATGCTCCTGAGGTACAGAGAGGCCACTGGAGGTaGGGGGACCTGGTCGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: EGPAKPQGHLASNAPEVQRGHWR*GDLVVW Trigger: CCACACGACCAGGTCCCCCAACCTCCAGTGGCCTCT...CTGTACCTCAGGAGCATTACTGGCTAAGTGCCCCTGAGGCTTGGCTGGCCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS TCA 90 bp | GACCAGCAGCACCATCGGAAACAGCTGCCCAGGGTCCTGGTCAGGTaGCACCCAGGCGCCAGGAGTCAAGACTCTCCAGGACCAGATGTT | + |
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Preference number: 5 (lower is better) Translates to: DQQHHRKQLPRVLVR*HPGARSQDSPGPDV Trigger: AACATCTGGTCCTGGAGAGTCTTGACTCCTGGCGCCTGGGTGTCACCTGACCAGGACCCTGGGCAGCTGTTTCCGATGGTGCTGCTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000229964.2 ENSMUST00000230912.2 |
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| CDS CCA 90 bp | CTCACAGGCTCCTTCATGCTGGGAGTCTCAGAGGCCACTGGAGGTTaGGGGACCTGGTCGTGTGGAACAGTCTTGATGACGTCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTGSFMLGVSEATGG*GTWSCGTVLMTSLA Trigger: GGCCAGAGACGTCATCAAGACTGTTCCACACGACCAGGTCCCCCAACCTCCAGTGGCCTCTGAGACTCCCAGCATGAAGGAGCCTGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000230912.2 |
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| CDS CCA 90 bp | CACAGGTCCATCTCATCGCCGATGCAGGCCAGCCTCAAGGCCACCTaGTTTCTGCCTTCCACGCACTCCATGAGGTCCACGTCTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: HRSISSPMQASLKAT*FLPSTHSMRSTSLT Trigger: TGTGAGAGACGTGGACCTCATGGAGTGCGTGGAAGGCAGAAACCAGGTGGCCTTGAGGCTGGCCTGCATCGGCGATGAGATGGACCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000230912.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCAGCCAAGCCTCAGGGGCACTTAGCCAGTAATGCTCCTGAGGTACAGATGTTTTCCCTGAGGTaGGTGAGGCTTCGAATCAAG | + |
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Preference number: 5 (lower is better) Translates to: EGPAKPQGHLASNAPEVQMFSLR*VRLRIK Trigger: CTTGATTCGAAGCCTCACCAACCTCAGGGAAAACAT...CTGTACCTCAGGAGCATTACTGGCTAAGTGCCCCTGAGGCTTGGCTGGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGAGGTACAGTGAATTCATTTGCCTTACAAAAACCCAGAAAACCTGTATGAGAGGCCACTGGAGGTaGGGGGACCTGGTCGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLRYSEFICLTKTQKTCMRGHWR*GDLVVW Trigger: CCACACGACCAGGTCCCCCAACCTCCAGTGGCCTCT...CATACAGGTTTTCTGGGTTTTTGTAAGGCAAATGAATTCACTGTACCTCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CAA 90 bp | GCCTGCAAACACCACTTAATTGAACTCTCCACCCCAAAGGACTCTAGTCCAGTAATGTTTTCCCTGAGGTaGGTGAGGCTTCGAATCAAG | + |
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Preference number: 5 (lower is better) Translates to: ACKHHLIELSTPKDSSPVMFSLR*VRLRIK Trigger: CTTGATTCGAAGCCTCACCAACCTCAGGGAAAACAT...TACTGGACTAGAGTCCTTTGGGGTGGAGAGTTCAATTAAGTGGTGTTTGCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016902.5 ENSMUST00000230912.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGAGGTACAGTGAATTCATTTGCCTTACAAAAACCCAGAAAACCTGTATGATGTTTTCCCTGAGGTaGGTGAGGCTTCGAATCAAG | + |
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Preference number: 5 (lower is better) Translates to: LLRYSEFICLTKTQKTCMMFSLR*VRLRIK Trigger: CTTGATTCGAAGCCTCACCAACCTCAGGGAAAACAT...CATACAGGTTTTCTGGGTTTTTGTAAGGCAAATGAATTCACTGTACCTCAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229964.2 ENSMUST00000230912.2 |
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| CDS GCA 72 bp | AGCAGCAAGAAGACCAGCAGCACCATCGGAAACAGCTaGCCAGGGTCCTGGTCAGGTGACACCCAGGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSKKTSSTIGNS*PGSWSGDTQAP Trigger: TGGCGCCTGGGTGTCACCTGACCAGGACCCTGGGCAGCTGTTTCCGATGGTGCTGCTGGTCTTCTTGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000229964.2 ENSMUST00000230912.2 |
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| CDS CCA 72 bp | ACCAGCAGCACCATCGGAAACAGCTGCCCAGGGTCCTaGTCAGGTGACACCCAGGCGCCAGGAGTCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: TSSTIGNSCPGS*SGDTQAPGVKT Trigger: AGTCTTGACTCCTGGCGCCTGGGTGTCACCTGACCAGGACCCTGGGCAGCTGTTTCCGATGGTGCTGCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000229964.2 ENSMUST00000230912.2 |
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| CDS CCA 72 bp | ATCTCATCGCCGATGCAGGCCAGCCTCAAGGCCACCTaGTTTCTGCCTTCCACGCACTCCATGAGGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: ISSPMQASLKAT*FLPSTHSMRST Trigger: CGTGGACCTCATGGAGTGCGTGGAAGGCAGAAACCAGGTGGCCTTGAGGCTGGCCTGCATCGGCGATGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000230912.2 |
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| CDS TCA 72 bp | TCAAGGCCACCTGGTTTCTGCCTTCCACGCACTCCATaGGGTCCACGTCTCTCACAGGCTCCTTCATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRPPGFCLPRTP*GPRLSQAPSCW Trigger: CCAGCATGAAGGAGCCTGTGAGAGACGTGGACCTCATGGAGTGCGTGGAAGGCAGAAACCAGGTGGCCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000230912.2 |
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| CDS CAA 72 bp | ACTGGAGGTTGGGGGACCTGGTCGTGTGGAACAGTCTaGATGACGTCTCTGGCCATAAGTCTCGCCTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: TGGWGTWSCGTV*MTSLAISLASD Trigger: GTCGGAGGCGAGACTTATGGCCAGAGACGTCATCAAGACTGTTCCACACGACCAGGTCCCCCAACCTCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000230912.2 |
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| CDS CCA 72 bp | CTCAGAGGCCACTGGAGGTTGGGGGACCTGGTCGTGTaGAACAGTCTTGATGACGTCTCTGGCCATAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LRGHWRLGDLVV*NSLDDVSGHKS Trigger: AGACTTATGGCCAGAGACGTCATCAAGACTGTTCCACACGACCAGGTCCCCCAACCTCCAGTGGCCTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016902.5 ENSMUST00000229165.2 ENSMUST00000230912.2 |
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