Pregenerated sensors for BID (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004446Ensembl transcript IDs: ENSMUST00000004560.12, ENSMUST00000145948.2, ENSMUST00000160684.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACAGCTGTTCTCTGGGACCTGTCTTCAGGCCAAGGTCTTTCCATaGTCGCGGTTCCTCTGGAGGCAGTGTCACCATCGGGCTTGTGCG | + |
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Preference number: 1 (lower is better) Translates to: RQLFSGTCLQAKVFP*SRFLWRQCHHRACA Trigger: CGCACAAGCCCGATGGTGACACTGCCTCCAGAGGAACCGCGACCATGGAAAGACCTTGGCCTGAAGACAGGTCCCAGAGAACAGCTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR GCA 90 bp | CTTCAGTGTCCACTAGGCTGGGTGGACTTCACGCTCATGGGCCGATaGACCTCTCCTAATGCTGTTCTCCTTAGACAGAAGCCCACCTAC | + |
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Preference number: 1 (lower is better) Translates to: LQCPLGWVDFTLMGR*TSPNAVLLRQKPTY Trigger: GTAGGTGGGCTTCTGTCTAAGGAGAACAGCATTAGGAGAGGTGCATCGGCCCATGAGCGTGAAGTCCACCCAGCCTAGTGGACACTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR CCA 90 bp | GATACACTCAAGCTGAACGCAGAGATGTCCAGTGAATCACCAGCTTaGGGTTCCCACCACCTGGAAATAGGGAGACAGCTGTTCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: DTLKLNAEMSSESPA*GSHHLEIGRQLFSG Trigger: CCCAGAGAACAGCTGTCTCCCTATTTCCAGGTGGTGGGAACCCCAAGCTGGTGATTCACTGGACATCTCTGCGTTCAGCTTGAGTGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR TCA 90 bp | CCTCTCCTAATGCTGTTCTCCTTAGACAGAAGCCCACCTACATGGTaGAGACAGCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATT | + |
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Preference number: 1 (lower is better) Translates to: PLLMLFSLDRSPPTW*RQPRAGSQEQSLGI Trigger: AATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGCTGTCTTCACCATGTAGGTGGGCTTCTGTCTAAGGAGAACAGCATTAGGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR CCA 90 bp | CTCCTTAGACAGAAGCCCACCTACATGGTGAAGACAGCCCAGAGCTaGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LLRQKPTYMVKTAQS*LSGTVTWHYKDAFL Trigger: CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGCTGTCTTCACCATGTAGGTGGGCTTCTGTCTAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR GCA 90 bp | AGCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATaGTTTTCTGCCTTACAGCCTGCTGTTAAGTTTCATTCCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: SPELALRNSHLALQR*FSALQPAVKFHSQV Trigger: CACTTGGGAATGAAACTTAACAGCAGGCTGTAAGGCAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR GCA 90 bp | GTCAGACTTGACTGGGAGTCACCTTTTGTGAACCGAGTGACCTGCTaGTGTTTTAGGTCTCTTCTGTGCATTCTGTTTGACACTGGTATG | + |
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Preference number: 1 (lower is better) Translates to: VRLDWESPFVNRVTC*CFRSLLCILFDTGM Trigger: CATACCAGTGTCAAACAGAATGCACAGAAGAGACCTAAAACAGCAGCAGGTCACTCGGTTCACAAAAGGTGACTCCCAGTCAAGTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR GCA 90 bp | TGTGTCAGACTTGACTGGGAGTCACCTTTTGTGAACCGAGTGACCTaGTGCTGTTTTAGGTCTCTTCTGTGCATTCTGTTTGACACTGGT | + |
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Preference number: 1 (lower is better) Translates to: CVRLDWESPFVNRVT*CCFRSLLCILFDTG Trigger: ACCAGTGTCAAACAGAATGCACAGAAGAGACCTAAAACAGCAGCAGGTCACTCGGTTCACAAAAGGTGACTCCCAGTCAAGTCTGACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR CCA 90 bp | TCCGATATGTGGGTCCCAATGCTTGATGGAAGGCACCTTGATCCATaGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGACA | + |
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Preference number: 1 (lower is better) Translates to: SDMWVPMLDGRHLDP*SFLASATFCHCEMT Trigger: TGTCATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCTTCCATCAAGCATTGGGACCCACATATCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR TCA 90 bp | GAGGCCTTGTCTCTGAAATACAGAAGCGGAGGGAACATTTGCTTTTaGTATGGAATCTTCTGTGATGTTACCCAGGGAAAGAGGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: EALSLKYRSGGNICF*YGIFCDVTQGKRMA Trigger: TGCCATCCTCTTTCCCTGGGTAACATCACAGAAGATTCCATATCAAAAGCAAATGTTCCCTCCGCTTCTGTATTTCAGAGACAAGGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACTGGGGTGAGGAGGGGTaGGGCGGTCGGGCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDWGEEG*GGRASH Trigger: ATGGGAAGCCCGACCGCCCCACCCCTCCTCACCCCA...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACGAAACAGCTAAACGCTaGGGTGAGGAGGGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDETAKR*GEEGWG Trigger: GCCCCACCCCTCCTCACCCCAGCGTTTAGCTGTTTC...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGAGCCCACCTACATGGTaGAGACAGCCCAGAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RHLDPWSFLASATFCHCESPPTW*RQPRAG Trigger: GCCAGCTCTGGGCTGTCTTCACCATGTAGGTGGGCT...CTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGATGACAGGTTTGTGGATGCCTTCCCCCAGGAAGGTGAGCTACACACCTGAGACAGCTGTTCTCTaGGACCTGTCTTCAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: CEMTGLWMPSPRKVSYTPETAVL*DLSSGQ Trigger: TTGGCCTGAAGACAGGTCCCAGAGAACAGCTGTCTC...AGGTGTGTAGCTCACCTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGATGACAGGTTTGTGGATGCCTTCCCCCAGGAAGGTGAGCTACACACCTAGTGAATCACCAGCTTaGGGTTCCCACCACCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: CEMTGLWMPSPRKVSYTPSESPA*GSHHLE Trigger: TTCCAGGTGGTGGGAACCCCAAGCTGGTGATTCACT...AGGTGTGTAGCTCACCTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTGAGATGACAGGTTTGTaGATGCCTTCCCCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CGCMPQCACGSQRTTCEVEMTGL*MPSPRK Trigger: CTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTC...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACAAGACAGCCCAGAGCTaGCTCTCAGGAACAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDKTAQS*LSGTVT Trigger: AGTGACTGTTCCTGAGAGCCAGCTCTGGGCTGTCTT...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCCCCAGGGAAAGAGGATaGCAGCTGTGCTCTACAACC | + |
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Preference number: 2 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPPRERG*QLCSTT Trigger: GGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGG...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR CCA 90 bp | AGGCACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGCCCAGGGAAAGAGGATaGCAGCTGTGCTCTACAACC | + |
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Preference number: 2 (lower is better) Translates to: RHLDPWSFLASATFCHCEPRERG*QLCSTT Trigger: GGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGG...CTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCAAGACAGCCCAGAGCTaGCTCTCAGGAACAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPKTAQS*LSGTVT Trigger: AGTGACTGTTCCTGAGAGCCAGCTCTGGGCTGTCTT...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR CAA 90 bp | CTACATGGTGAAGACAGCCCAGAGCTGGCTCTCAGGAACAGTCACTaGGCATTACAAAGATGCTTTTCTGCCTTACAGCCTGCTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LHGEDSPELALRNSH*ALQRCFSALQPAVK Trigger: CTTAACAGCAGGCTGTAAGGCAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGCTGTCTTCACCATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCACAGCTGTGTGTTTCTaGTGGGATGGTCTGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPTAVCF*WDGLTF Trigger: GAAGGTCAGACCATCCCAGCAGAAACACACAGCTGT...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAATTTCTTGGGGTGAGGAGGGGTaGGGCGGTCGGGCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: QLSQTSREEPFILKKQISWGEEG*GGRASH Trigger: ATGGGAAGCCCGACCGCCCCACCCCTCCTCACCCCA...AGAAATTTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGTCCTGGGTTCCATCCTaGGCATGGAATACGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: HLDPWSFLASATFCHCEMSWVPS*AWNTYL Trigger: CAGGTACGTATTCCATGCCCAGGATGGAACCCAGGA...CATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR CAA 90 bp | TCTCTACTTCCGATATGTGGGTCCCAATGCTTGATGGAAGGCACCTaGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLLPICGSQCLMEGT*IHGVFLPVPRFVIV Trigger: CACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCTTCCATCAAGCATTGGGACCCACATATCGGAAGTAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR CAA 90 bp | CCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTGATTaGTTCTCTACTTCCGATATGTGGGTCCCAATGCTTGATGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PQCACGSQRTTCEVD*FSTSDMWVPMLDGR Trigger: CCTTCCATCAAGCATTGGGACCCACATATCGGAAGTAGAGAACAAATCAACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGCTAGCCCTGGACACTTaGGATCCCAAAGGTCATGTT | + |
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Preference number: 2 (lower is better) Translates to: HLDPWSFLASATFCHCEMLALDT*DPKGHV Trigger: AACATGACCTTTGGGATCTCAAGTGTCCAGGGCTAG...CATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR CAA 90 bp | GTGAAGTTGATTTGTTCTCTACTTCCGATATGTGGGTCCCAATGCTaGATGGAAGGCACCTTGATCCATGGAGTTTTCTTGCCAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VKLICSLLPICGSQC*MEGTLIHGVFLPVP Trigger: TGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCTTCCATCAAGCATTGGGACCCACATATCGGAAGTAGAGAACAAATCAACTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCAAGGCCATACTAGGCTCAGAGCTAAAGGCTAGCCCTGGACACTTGAGAATATGGAATCTTCTGTaGTGTTACCCAGGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: MFKAILGSELKASPGHLRIWNLL*CYPGKE Trigger: CTCTTTCCCTGGGTAACATCACAGAAGATTCCATAT...TCTCAAGTGTCCAGGGCTAGCCTTTAGCTCTGAGCCTAGTATGGCCTTGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGAACCGAGTGACCTGCTaGTGTTTTAGGTCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HLDPWSFLASATFCHCEMNRVTC*CFRSLL Trigger: CAGAAGAGACCTAAAACAGCAGCAGGTCACTCGGTT...CATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACAGTTTCATTCCCAAGTaGGAACCCATACAGCTGATA | + |
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Preference number: 2 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDSFIPK*EPIQLI Trigger: TATCAGCTGTATGGGTTCCCACTTGGGAATGAAACT...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAATTTCTAGCCCACCTACATGGTaGAGACAGCCCAGAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QLSQTSREEPFILKKQISSPPTW*RQPRAG Trigger: GCCAGCTCTGGGCTGTCTTCACCATGTAGGTGGGCT...AGAAATTTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCTTTGACACTGGTATGTaGGTTGTTCTTTGCATTCCG | + |
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Preference number: 2 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPFDTGM*VVLCIP Trigger: CGGAATGCAAAGAACAACTCACATACCAGTGTCAAA...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR TCA 90 bp | AGGCACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGTCTGTGCATTCTGTTTaGCACTGGTATGTGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RHLDPWSFLASATFCHCESVHSV*HWYVSC Trigger: ACAACTCACATACCAGTGTCAAACAGAATGCACAGA...CTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTGGGAACATTTGCTTTTaGTATGGAATCTTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: CGCMPQCACGSQRTTCEVGNICF*YGIFCD Trigger: ATCACAGAAGATTCCATATCAAAAGCAAATGTTCCC...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTTCAGGAACAGTCACTTaGCATTACAAAGATGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CGCMPQCACGSQRTTCEVSGTVT*HYKDAF Trigger: AAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGA...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAATTTCTGAAACAGCTAAACGCTaGGGTGAGGAGGGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: QLSQTSREEPFILKKQISETAKR*GEEGWG Trigger: GCCCCACCCCTCCTCACCCCAGCGTTTAGCTGTTTC...AGAAATTTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR CAA 90 bp | GTTTTAGGTCTCTTCTGTGCATTCTGTTTGACACTGGTATGTGAGTaGTTCTTTGCATTCCGTAGCAAGAGCCTGAGTGTAACTGACACC | + |
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Preference number: 2 (lower is better) Translates to: VLGLFCAFCLTLVCE*FFAFRSKSLSVTDT Trigger: GGTGTCAGTTACACTCAGGCTCTTGCTACGGAATGCAAAGAACAACTCACATACCAGTGTCAAACAGAATGCACAGAAGAGACCTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATACAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAACGCAGAGATGTCCAGTaGATCACCAGCTTGGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: EIQLSQTSREEPFILKKQRRDVQ*ITSLGF Trigger: GAACCCCAAGCTGGTGATTCACTGGACATCTCTGCG...TTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTGTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCGGGAACATTTGCTTTTaGTATGGAATCTTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPGNICF*YGIFCD Trigger: ATCACAGAAGATTCCATATCAAAAGCAAATGTTCCC...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR CCA 90 bp | GAGATACAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAGAGACAGCTGTTCTCTaGGACCTGTCTTCAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: EIQLSQTSREEPFILKKQETAVL*DLSSGQ Trigger: TTGGCCTGAAGACAGGTCCCAGAGAACAGCTGTCTC...TTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTGTATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR CCA 90 bp | GGTCACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTTGCCTTTCAGTGTTGTGTTTCTGCTGGGATaGTCTGACCTTCTGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: GHVSYSKSACTLGLPFSVVFLLG*SDLLMY Trigger: GTACATCAGAAGGTCAGACCATCCCAGCAGAAACAC...AACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR CAA 90 bp | AGACTAAAAGTGCCTCTTTCTCCTAACTCCTTGATTAAACTCAGTTaGTTAGTGGTTCTGGTATCTTGTCCCCCAGGTACTGGAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: RLKVPLSPNSLIKLS*LVVLVSCPPGTGMV Trigger: AACCATTCCAGTACCTGGGGGACAAGATACCAGAACCACTAACAAACTGAGTTTAATCAAGGAGTTAGGAGAAAGAGGCACTTTTAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAATTTCTAGTGAATCACCAGCTTaGGGTTCCCACCACCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: QLSQTSREEPFILKKQISSESPA*GSHHLE Trigger: TTCCAGGTGGTGGGAACCCCAAGCTGGTGATTCACT...AGAAATTTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| 3UTR-3UTR TCA 90 bp | TTGAGACTAAAAGTGCCTCTTTCTCCTAACTCCTTGATTAAACTCAGTTTGTTAGAGCCTGAGTGTAACTaGCACCACACAGATAAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: LRLKVPLSPNSLIKLSLLEPECN*HHTDKS Trigger: CGACTTATCTGTGTGGTGTCAGTTACACTCAGGCTC...TAACAAACTGAGTTTAATCAAGGAGTTAGGAGAAAGAGGCACTTTTAGTCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATACAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAACAGTGTGTCAGACTTaGCTGGGAGTCACCTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: EIQLSQTSREEPFILKKQTVCQT*LGVTFC Trigger: ACAAAAGGTGACTCCCAGTCAAGTCTGACACACTGT...TTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTGTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGACTAAAAGTGCCTCTTTCTCCTAACTCCTTGATTAAACTCAGTTTGTTAATCCCAGTACTCGGGTaGAGGCAGGAAGACAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LRLKVPLSPNSLIKLSLLIPVLG*RQEDNV Trigger: AACATTGTCTTCCTGCCTTCACCCGAGTACTGGGAT...TAACAAACTGAGTTTAATCAAGGAGTTAGGAGAAAGAGGCACTTTTAGTCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGATACAGCTCTCCCAAACATCTAGAGAAGAGCCTTTTATTTTGAAGAAACAAAACCGAGTGACCTGCTaGTGTTTTAGGTCTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: EIQLSQTSREEPFILKKQNRVTC*CFRSLL Trigger: CAGAAGAGACCTAAAACAGCAGCAGGTCACTCGGTT...TTGTTTCTTCAAAATAAAAGGCTCTTCTCTAGATGTTTGGGAGAGCTGTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGACTAAAAGTGCCTCTTTCTCCTAACTCCTTGATTAAACTCAGTTTGTTAACAGTGTGTCAGACTTaGCTGGGAGTCACCTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LRLKVPLSPNSLIKLSLLTVCQT*LGVTFC Trigger: ACAAAAGGTGACTCCCAGTCAAGTCTGACACACTGT...TAACAAACTGAGTTTAATCAAGGAGTTAGGAGAAAGAGGCACTTTTAGTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR CAA 90 bp | GGATTATTTCAGGTCACGTTTCATATTCTAAAAGTGCATGCACTCTaGGTTTGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GLFQVTFHILKVHAL*VCLSVLKTWSWDTK Trigger: TTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACCTGAAATAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR-3UTR TCA 90 bp | CACTATTTACTTGGGGGATTATTTCAGGTCACGTTTCATATTCTAAAAGTGCATATATGGAATCTTCTGTaGTGTTACCCAGGGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HYLLGGLFQVTFHILKVHIWNLL*CYPGKE Trigger: CTCTTTCCCTGGGTAACATCACAGAAGATTCCATAT...ATGCACTTTTAGAATATGAAACGTGACCTGAAATAATCCCCCAAGTAAATAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR-3UTR TCA 90 bp | CACTATTTACTTGGGGGATTATTTCAGGTCACGTTTCATATTCTAAAAGTGCATTTTGCCTTTCAGTGTTaGAAACATGGTCCTGGGATA | + |
|
Preference number: 2 (lower is better) Translates to: HYLLGGLFQVTFHILKVHFAFQC*KHGPGI Trigger: TATCCCAGGACCATGTTTTCAACACTGAAAGGCAAA...ATGCACTTTTAGAATATGAAACGTGACCTGAAATAATCCCCCAAGTAAATAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR-3UTR GCA 90 bp | CACTATTTACTTGGGGGATTATTTCAGGTCACGTTTCATATTCTAAAAGTGCATTTGGCATTACAAAGATaGTTTTCTGCCTTACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HYLLGGLFQVTFHILKVHLALQR*FSALQP Trigger: AGGCTGTAAGGCAGAAAAGCATCTTTGTAATGCCAA...ATGCACTTTTAGAATATGAAACGTGACCTGAAATAATCCCCCAAGTAAATAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR CCA 72 bp | CTTCAGGCCAAGGTCTTTCCATGGTCGCGGTTCCTCTaGAGGCAGTGTCACCATCGGGCTTGTGCGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LQAKVFPWSRFL*RQCHHRACAGS Trigger: GGAGCCCGCACAAGCCCGATGGTGACACTGCCTCCAGAGGAACCGCGACCATGGAAAGACCTTGGCCTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | TTCTCTGGGACCTGTCTTCAGGCCAAGGTCTTTCCATaGTCGCGGTTCCTCTGGAGGCAGTGTCACCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: FSGTCLQAKVFP*SRFLWRQCHHR Trigger: CCGATGGTGACACTGCCTCCAGAGGAACCGCGACCATGGAAAGACCTTGGCCTGAAGACAGGTCCCAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR TCA 72 bp | GCCATTCGGCTTTTACAAAGGCAGGTGGAGGCCTTGTaGGCACTTCAGTGTCCACTAGGCTGGGTGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: AIRLLQRQVEAL*ALQCPLGWVDF Trigger: GAAGTCCACCCAGCCTAGTGGACACTGAAGTGCTCACAAGGCCTCCACCTGCCTTTGTAAAAGCCGAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR GCA 72 bp | CCACTAGGCTGGGTGGACTTCACGCTCATGGGCCGATaGACCTCTCCTAATGCTGTTCTCCTTAGACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLGWVDFTLMGR*TSPNAVLLRQK Trigger: CTTCTGTCTAAGGAGAACAGCATTAGGAGAGGTGCATCGGCCCATGAGCGTGAAGTCCACCCAGCCTAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | AAGCTGAACGCAGAGATGTCCAGTGAATCACCAGCTTaGGGTTCCCACCACCTGGAAATAGGGAGACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLNAEMSSESPA*GSHHLEIGRQL Trigger: CAGCTGTCTCCCTATTTCCAGGTGGTGGGAACCCCAAGCTGGTGATTCACTGGACATCTCTGCGTTCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTTGTGAGATGACAGGTTaGTGGATGCCTTCCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CGCMPQCACGSQRTTCEVCEMTG*WMPSPR Trigger: CCTGGGGGAAGGCATCCACAAACCTGTCATCTCACA...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | CAGAAGCCCACCTACATGGTGAAGACAGCCCAGAGCTaGCTCTCAGGAACAGTCACTTGGCATTACAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QKPTYMVKTAQS*LSGTVTWHYKD Trigger: ATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGCTGTCTTCACCATGTAGGTGGGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | ACAGTCTGTGTGGTCCTACATCCATGGGCCATCTGTTaGCCAGCCTTTTTCTCCTGGACCTATATTTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVCVVLHPWAIC*PAFFSWTYISP Trigger: AGGGGAAATATAGGTCCAGGAGAAAAAGGCTGGCCAACAGATGGCCCATGGATGTAGGACCACACAGACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | AGTGCCACGTTTTGTCATTGTGAGATGACAGGTTTGTaGATGCCTTCCCCCAGGAAGGTGAGCTACACACCT | + |
|
Preference number: 3 (lower is better) Translates to: SATFCHCEMTGL*MPSPRKVSYTP Trigger: AGGTGTGTAGCTCACCTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTCACAATGACAAAACGTGGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR TCA 72 bp | ACAGCTGTGTGTTTCTGCTGGGATGGTCTGACCTTCTaGTGTACTAGGTCATTTGGAGATACAGCTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TAVCFCWDGLTF*CTRSFGDTALP Trigger: TGGGAGAGCTGTATCTCCAAATGACCTAGTACATCAGAAGGTCAGACCATCCCAGCAGAAACACACAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR GCA 72 bp | GACTGGGAGTCACCTTTTGTGAACCGAGTGACCTGCTaGTGTTTTAGGTCTCTTCTGTGCATTCTGTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DWESPFVNRVTC*CFRSLLCILFD Trigger: GTCAAACAGAATGCACAGAAGAGACCTAAAACAGCAGCAGGTCACTCGGTTCACAAAAGGTGACTCCCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | GGTATGATACACCCAAGCCATCACAGCCACCATGGCTaGGATGAGTTCAGAACTAGAATACTTGTAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GMIHPSHHSHHG*DEFRTRILVGC Trigger: ACAGCCTACAAGTATTCTAGTTCTGAACTCATCCCAGCCATGGTGGCTGTGATGGCTTGGGTGTATCATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | TGGGTCCCAATGCTTGATGGAAGGCACCTTGATCCATaGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: WVPMLDGRHLDP*SFLASATFCHC Trigger: ACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTGCCTTCCATCAAGCATTGGGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTCTCAGGAACAGTCACTaGGCATTACAAAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CGCMPQCACGSQRTTCEVLRNSH*ALQRCF Trigger: AAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAG...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGAGTGGTTCTGGTATCTaGTCCCCCAGGTACTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLDPWSFLASATFCHCEMSGSGI*SPRYWN Trigger: ATTCCAGTACCTGGGGGACAAGATACCAGAACCACT...CATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR TCA 72 bp | CGGAGGGAACATTTGCTTTTGATATGGAATCTTCTGTaGTGTTACCCAGGGAAAGAGGATGGCAGCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RREHLLLIWNLL*CYPGKEDGSCA Trigger: AGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAAGATTCCATATCAAAAGCAAATGTTCCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR GCA 72 bp | CTTGACTGGGAGTCACCTTTTGTGAACCGAGTGACCTaGTGCTGTTTTAGGTCTCTTCTGTGCATTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LDWESPFVNRVT*CCFRSLLCILF Trigger: AAACAGAATGCACAGAAGAGACCTAAAACAGCAGCAGGTCACTCGGTTCACAAAAGGTGACTCCCAGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | CTGCCTTACAGCCTGCTGTTAAGTTTCATTCCCAAGTaGGAACCCATACAGCTGATAGGACAAAGGTACATG | + |
|
Preference number: 3 (lower is better) Translates to: LPYSLLLSFIPK*EPIQLIGQRYM Trigger: CATGTACCTTTGTCCTATCAGCTGTATGGGTTCCCACTTGGGAATGAAACTTAACAGCAGGCTGTAAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCAAGCGGAGGGAACATTaGCTTTTGATATGGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPKRREH*LLIWNL Trigger: AAGATTCCATATCAAAAGCAAATGTTCCCTCCGCTT...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR TCA 72 bp | GTAACAACGCTTGAGGATACAGTGAGGCCTTGTCTCTaGAATACAGAAGCGGAGGGAACATTTGCTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VTTLEDTVRPCL*NTEAEGTFAFD Trigger: ATCAAAAGCAAATGTTCCCTCCGCTTCTGTATTTCAGAGACAAGGCCTCACTGTATCCTCAAGCGTTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR TCA 72 bp | CATGTTCCTAAAGAAAAATCCACTAATTTACAGGTATaGTACACCCAAGCCATCACAGCCACCATGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HVPKEKSTNLQV*YTQAITATMAG Trigger: CCCAGCCATGGTGGCTGTGATGGCTTGGGTGTATCATACCTGTAAATTAGTGGATTTTTCTTTAGGAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CCA 72 bp | ACTTGTGAAGTTGATTTGTTCTCTACTTCCGATATGTaGGTCCCAATGCTTGATGGAAGGCACCTTGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: TCEVDLFSTSDM*VPMLDGRHLDP Trigger: TGGATCAAGGTGCCTTCCATCAAGCATTGGGACCCACATATCGGAAGTAGAGAACAAATCAACTTCACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR GCA 72 bp | ACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTTaGCTTTCAGTGTTGAAAACATGGTCCTGGGATACA | + |
|
Preference number: 3 (lower is better) Translates to: TFHILKVHALLV*LSVLKTWSWDT Trigger: TGTATCCCAGGACCATGTTTTCAACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTGGGACCTGTCTTCAGGCCAAGGTCTTTCCATGGTCGCGGTTCCTCTGCTATTCTTCCTTGGTTaGAGGAGCGGCTGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLWDLSSGQGLSMVAVPLLFFLG*RSGWPG Trigger: GCCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAG...CAGAGGAACCGCGACCATGGAAAGACCTTGGCCTGAAGACAGGTCCCAGAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACAAGGAGCGGCTGGCCTaGCTGCCATCTGTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDKERLA*LPSVCS Trigger: GCTGCAGACAGATGGCAGCCAGGCCAGCCGCTCCTT...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTCAAGGCCATACTAGGCTCAGAGCTAAAGGCTAGCCCTGGACACTTGAGAAAGGAGCGGCTGGCCTaGCTGCCATCTGTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MFKAILGSELKASPGHLRKERLA*LPSVCS Trigger: GCTGCAGACAGATGGCAGCCAGGCCAGCCGCTCCTT...TCTCAAGTGTCCAGGGCTAGCCTTTAGCTCTGAGCCTAGTATGGCCTTGAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTCTATTCTTCCTTGGTTaGAGGAGCGGCTGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGCMPQCACGSQRTTCEVLFFLG*RSGWPG Trigger: GCCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAG...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTGGGACCTGTCTTCAGGCCAAGGTCTTTCCATGGTCGCGGTTCCTCTGCCTCATCAAGGGCTTTaGCCAGGCAGTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLWDLSSGQGLSMVAVPLPHQGL*PGSSFC Trigger: ACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGG...CAGAGGAACCGCGACCATGGAAAGACCTTGGCCTGAAGACAGGTCCCAGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTGGGACCTGTCTTCAGGCCAAGGTCTTTCCATGGTCGCGGTTCCTCTGTGGATGATTTCTTCCTaGCTTTCAGAATCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLWDLSSGQGLSMVAVPLWMISS*LSESGS Trigger: AGAGCCAGATTCTGAAAGTCAGGAAGAAATCATCCA...CAGAGGAACCGCGACCATGGAAAGACCTTGGCCTGAAGACAGGTCCCAGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACCTCACCAGTGTGGGCTaGATGTTGTGGTCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDLTSVG*MLWSIS Trigger: TGAGATGGACCACAACATCCAGCCCACACTGGTGAG...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTGCATGCCACAGTGTGCATGTGGGAGTCAGAGGACAACTTGTGAAGTTCCTCATCAAGGGCTTTaGCCAGGCAGTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGCMPQCACGSQRTTCEVPHQGL*PGSSFC Trigger: ACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGG...AACTTCACAAGTTGTCCTCTGACTCCCACATGCACACTGTGGCATGCAGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTGCGTTCTCCATGTCTCTaGGGAAGGCTGTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSWLSGTVTWHYKDAFLRSPCL*GRLSSP Trigger: AGGTGAAGACAGCCTTCCCCAGAGACATGGAGAACG...CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CAA 72 bp | AACAGTCTGTGTGGTCCTACATCCATGGGCCATCTGTaGGCCAGCCTTTTTCTCCTGGACCTATATTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLCGPTSMGHL*ASLFLLDLYFP Trigger: GGGGAAATATAGGTCCAGGAGAAAAAGGCTGGCCAACAGATGGCCCATGGATGTAGGACCACACAGACTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACGTGGGCTGGATGTTGTaGTCCATCTCATCGCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDVGWML*SISSPI Trigger: AATAGGCGATGAGATGGACCACAACATCCAGCCCAC...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTCAAGGCCATACTAGGCTCAGAGCTAAAGGCTAGCCCTGGACACTTGAGAATCACGGAGCAAAGATaGTGCGTGACTGGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MFKAILGSELKASPGHLRITEQR*CVTGHF Trigger: AAAGTGGCCAGTCACGCACCATCTTTGCTCCGTGAT...TCTCAAGTGTCCAGGGCTAGCCTTTAGCTCTGAGCCTAGTATGGCCTTGAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGATGACAGGTTTGTGGATGCCTTCCCCCAGGAAGGTGAGCTACACACCTAAGTTGACAGTCGTGTaGAAGACATCACGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CEMTGLWMPSPRKVSYTPKLTVV*KTSRSK Trigger: TTTGCTCCGTGATGTCTTCCACACGACTGTCAACTT...AGGTGTGTAGCTCACCTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCGTGGGCTGGATGTTGTaGTCCATCTCATCGCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPVGWML*SISSPI Trigger: AATAGGCGATGAGATGGACCACAACATCCAGCCCAC...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| CDS-3UTR CCA 90 bp | CACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGCGTTCTCCATGTCTCTaGGGAAGGCTGTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HLDPWSFLASATFCHCEMRSPCL*GRLSSP Trigger: AGGTGAAGACAGCCTTCCCCAGAGACATGGAGAACG...CATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTGTGGATGATTTCTTCCTaGCTTTCAGAATCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSWLSGTVTWHYKDAFLWMISS*LSESGS Trigger: AGAGCCAGATTCTGAAAGTCAGGAAGAAATCATCCA...CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CAA 72 bp | GCATGTGGGAGTCAGAGGACAACTTGTGAAGTTGATTaGTTCTCTACTTCCGATATGTGGGTCCCAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACGSQRTTCEVD*FSTSDMWVPML Trigger: AAGCATTGGGACCCACATATCGGAAGTAGAGAACAAATCAACTTCACAAGTTGTCCTCTGACTCCCACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR CAA 72 bp | CTCTTCTGTGCATTCTGTTTGACACTGGTATGTGAGTaGTTCTTTGCATTCCGTAGCAAGAGCCTGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFCAFCLTLVCE*FFAFRSKSLSV Trigger: TACACTCAGGCTCTTGCTACGGAATGCAAAGAACAACTCACATACCAGTGTCAAACAGAATGCACAGAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CAA 72 bp | CCTGCTGCTGTTTTAGGTCTCTTCTGTGCATTCTGTTaGACACTGGTATGTGAGTTGTTCTTTGCATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PAAVLGLFCAFC*TLVCELFFAFR Trigger: ACGGAATGCAAAGAACAACTCACATACCAGTGTCAAACAGAATGCACAGAAGAGACCTAAAACAGCAGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| 3UTR CAA 72 bp | ATTTGTTCTCTACTTCCGATATGTGGGTCCCAATGCTaGATGGAAGGCACCTTGATCCATGGAGTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICSLLPICGSQC*MEGTLIHGVFL Trigger: CAAGAAAACTCCATGGATCAAGGTGCCTTCCATCAAGCATTGGGACCCACATATCGGAAGTAGAGAACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| 3UTR CAA 72 bp | CAGGTCACGTTTCATATTCTAAAAGTGCATGCACTCTaGGTTTGCCTTTCAGTGTTGAAAACATGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTFHILKVHAL*VCLSVLKTWSW Trigger: CCAGGACCATGTTTTCAACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| CDS-3UTR CCA 90 bp | GGTCACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTTGCCTTTCAGTGTTAAGTTGACAGTCGTGTaGAAGACATCACGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHVSYSKSACTLGLPFSVKLTVV*KTSRSK Trigger: TTTGCTCCGTGATGTCTTCCACACGACTGTCAACTT...AACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR CAA 72 bp | CACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTaGCCTTTCAGTGTTGAAAACATGGTCCTGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: HVSYSKSACTLG*PFSVENMVLGY Trigger: GTATCCCAGGACCATGTTTTCAACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| CDS-3UTR CCA 90 bp | CACTATTTACTTGGGGGATTATTTCAGGTCACGTTTCATATTCTAAAAGTGCATATCACGGAGCAAAGATaGTGCGTGACTGGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HYLLGGLFQVTFHILKVHITEQR*CVTGHF Trigger: AAAGTGGCCAGTCACGCACCATCTTTGCTCCGTGAT...ATGCACTTTTAGAATATGAAACGTGACCTGAAATAATCCCCCAAGTAAATAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| 3UTR CAA 72 bp | TCCTTGAGACTAAAAGTGCCTCTTTCTCCTAACTCCTaGATTAAACTCAGTTTGTTAGTGGTTCTGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLKVPLSPNS*IKLSLLVVLVS Trigger: AGATACCAGAACCACTAACAAACTGAGTTTAATCAAGGAGTTAGGAGAAAGAGGCACTTTTAGTCTCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS CCA 90 bp | TCCCGACCCAGCACCTCCAGCTCTTGGCGAGTACAGCCAGAGCTTTaGAGAAAGCCGAACACCAGCAGGTCTGTGATGTGCTCGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRPSTSSSWRVQPEL*RKPNTSRSVMCSAP Trigger: GGGGGCCGAGCACATCACAGACCTGCTGGTGTTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTGGGTCGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
||
| CDS CCA 90 bp | TCAGAATCTGGCTCTATTCTTCCTTGGTTGAAGGAGCGGCTGGCCTaGCTGCCATCTGTCTGCAGCTCGTCTTCGAGGTCTGCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SESGSILPWLKERLA*LPSVCSSSSRSASQ Trigger: CTGGGAGGCAGACCTCGAAGACGAGCTGCAGACAGATGGCAGCCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAGAGCCAGATTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS TCA 90 bp | TGGCCAGGCAGTTCCTTTTGTCTTCCTCCGACAGGCTGCCATTCATaGACTGTGCGGCTAGCTGTCTCACCAGTGTGGGCTGGATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WPGSSFCLPPTGCHS*TVRLAVSPVWAGCC Trigger: ACAACATCCAGCCCACACTGGTGAGACAGCTAGCCGCACAGTTCATGAATGGCAGCCTGTCGGAGGAAGACAAAAGGAACTGCCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CCA 90 bp | TCTCCATGTCTCTGGGGAAGGCTGTCTTCACCTCATCAAGGGCTTTaGCCAGGCAGTTCCTTTTGTCTTCCTCCGACAGGCTGCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPCLWGRLSSPHQGL*PGSSFCLPPTGCHS Trigger: TGAATGGCAGCCTGTCGGAGGAAGACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGTGAAGACAGCCTTCCCCAGAGACATGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CCA 90 bp | ACAGCATGGTCATTATCAGCATGGCCTTGTCGTTCTCCATGTCTCTaGGGAAGGCTGTCTTCACCTCATCAAGGGCTTTGGCCAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TAWSLSAWPCRSPCL*GRLSSPHQGLWPGS Trigger: ACTGCCTGGCCAAAGCCCTTGATGAGGTGAAGACAGCCTTCCCCAGAGACATGGAGAACGACAAGGCCATGCTGATAATGACCATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGATGACAGGTTTGTGGATGCCTTCCCCCAGGAAGGTGAGCTACACACCTACCTCATCAAGGGCTTaGGCCAGGCAGTTCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CEMTGLWMPSPRKVSYTPTSSRA*ARQFLL Trigger: CAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGT...AGGTGTGTAGCTCACCTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGATCCATGGAGTTTTCTTGCCAGTGCCACGTTTTGTCATTGTGAGATGCAGCACCTCCAGCTCTaGGCGAGTACAGCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLDPWSFLASATFCHCEMQHLQL*ASTARA Trigger: AGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTG...CATCTCACAATGACAAAACGTGGCACTGGCAAGAAAACTCCATGGATCAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTGTCTATTCTTCCTTGGTaGAAGGAGCGGCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQSWLSGTVTWHYKDAFLSILPW*KERLAW Trigger: CCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAGA...CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTGTGGCTCTATTCTTCCTaGGTTGAAGGAGCGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQSWLSGTVTWHYKDAFLWLYSS*VEGAAG Trigger: GCCAGCCGCTCCTTCAACCAAGGAAGAATAGAGCCA...CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTGAGTGTGGGCTGGATGTaGTGGTCCATCTCATCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQSWLSGTVTWHYKDAFLSVGWM*WSISSP Trigger: AGGCGATGAGATGGACCACAACATCCAGCCCACACT...CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGATGTTACCCAGGGAAAGAGGATGGCAGCTGTGCTCTACAACCAAGACAGTGTGGGCTGGATGTaGTGGTCCATCTCATCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FCDVTQGKRMAAVLYNQDSVGWM*WSISSP Trigger: AGGCGATGAGATGGACCACAACATCCAGCCCACACT...GTCTTGGTTGTAGAGCACAGCTGCCATCCTCTTTCCCTGGGTAACATCACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTTGCCTTTCAGTGTTCAGCACCTCCAGCTCTaGGCGAGTACAGCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHVSYSKSACTLGLPFSVQHLQL*ASTARA Trigger: AGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTG...AACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAAGGCCATACTAGGCTCAGAGCTAAAGGCTAGCCCTGGACACTTGAGAATTATCAGCATGGCCTaGTCGTTCTCCATGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MFKAILGSELKASPGHLRIISMA*SFSMSL Trigger: CAGAGACATGGAGAACGACAAGGCCATGCTGATAAT...TCTCAAGTGTCCAGGGCTAGCCTTTAGCTCTGAGCCTAGTATGGCCTTGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160684.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTCAGTGTTGAAAACATGGTCCTGGGATACAAAACCACACCTCAGTCCCATTATCAGCATGGCCTaGTCGTTCTCCATGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSVLKTWSWDTKPHLSPIISMA*SFSMSL Trigger: CAGAGACATGGAGAACGACAAGGCCATGCTGATAAT...GGGACTGAGGTGTGGTTTTGTATCCCAGGACCATGTTTTCAACACTGAAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| CDS-3UTR CAA 90 bp | GGTCACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTTGCCTTTCAGTGTTTCTATTCTTCCTTGGTaGAAGGAGCGGCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHVSYSKSACTLGLPFSVSILPW*KERLAW Trigger: CCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAGA...AACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| CDS TCA 90 bp | CCATCTCATCGCCTATTTGGGCGAGATGTCTGGCAATGTTGTGGATaGTTTCTTCCTGACTTTCAGAATCTGGCTCTATTCTTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSHRLFGRDVWQCCG*FLPDFQNLALFFLG Trigger: ACCAAGGAAGAATAGAGCCAGATTCTGAAAGTCAGGAAGAAATCATCCACAACATTGCCAGACATCTCGCCCAAATAGGCGATGAGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS-3UTR CAA 90 bp | GGTCACGTTTCATATTCTAAAAGTGCATGCACTCTTGGTTTGCCTTTCAGTGTTACCTCATCAAGGGCTTaGGCCAGGCAGTTCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHVSYSKSACTLGLPFSVTSSRA*ARQFLL Trigger: CAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGT...AACACTGAAAGGCAAACCAAGAGTGCATGCACTTTTAGAATATGAAACGTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004560.12 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGCTGGCTCTCAGGAACAGTCACTTGGCATTACAAAGATGCTTTTCTGTTCTGGTTAATAAAGTaGACAGTCGTGTGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: AQSWLSGTVTWHYKDAFLFWLIK*TVVWKT Trigger: TGTCTTCCACACGACTGTCAACTTTATTAACCAGAA...CAGAAAAGCATCTTTGTAATGCCAAGTGACTGTTCCTGAGAGCCAGCTCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS CAA 72 bp | CTGCAGCTCGTCTTCGAGGTCTGCCTCCCAGTAAGCTaGCACAGGCAGTTCCCGACCCAGCACCTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQLVFEVCLPVS*HRQFPTQHLQL Trigger: GAGCTGGAGGTGCTGGGTCGGGAACTGCCTGTGCAAGCTTACTGGGAGGCAGACCTCGAAGACGAGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS CAA 90 bp | TTCCCGACCCAGCACCTCCAGCTCTTGGCGAGTACAGCCAGAGCTTaGGAGAAAGCCGAACACCAGCAGGTCTGTGATGTGCTCGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPTQHLQLLASTARA*EKAEHQQVCDVLGP Trigger: GGGGCCGAGCACATCACAGACCTGCTGGTGTTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTGGGTCGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
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| CDS CAA 90 bp | GCCATCTGTCTGCAGCTCGTCTTCGAGGTCTGCCTCCCAGTAAGCTaGCACAGGCAGTTCCCGACCCAGCACCTCCAGCTCTTGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: AICLQLVFEVCLPVS*HRQFPTQHLQLLAS Trigger: ACTCGCCAAGAGCTGGAGGTGCTGGGTCGGGAACTGCCTGTGCAAGCTTACTGGGAGGCAGACCTCGAAGACGAGCTGCAGACAGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS GCA 72 bp | CTTTGGAGAAAGCCGAACACCAGCAGGTCTGTGATGTaGTCGGCCCCCAGGCCGGAACCGTTGCTGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LWRKPNTSRSVM*SAPRPEPLLTS Trigger: TGAGGTCAGCAACGGTTCCGGCCTGGGGGCCGAGCACATCACAGACCTGCTGGTGTTCGGCTTTCTCCAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
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| CDS CCA 72 bp | TGCACAGGCAGTTCCCGACCCAGCACCTCCAGCTCTTaGCGAGTACAGCCAGAGCTTTGGAGAAAGCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CTGSSRPSTSSS*RVQPELWRKPN Trigger: GTTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTGGGTCGGGAACTGCCTGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
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| CDS CAA 90 bp | CCAGTAAGCTTGCACAGGCAGTTCCCGACCCAGCACCTCCAGCTCTaGGCGAGTACAGCCAGAGCTTTGGAGAAAGCCGAACACCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVSLHRQFPTQHLQL*ASTARALEKAEHQQ Trigger: CTGCTGGTGTTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTGGGTCGGGAACTGCCTGTGCAAGCTTACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
||
| CDS CCA 72 bp | GGCTCTATTCTTCCTTGGTTGAAGGAGCGGCTGGCCTaGCTGCCATCTGTCTGCAGCTCGTCTTCGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSILPWLKERLA*LPSVCSSSSRS Trigger: AGACCTCGAAGACGAGCTGCAGACAGATGGCAGCCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAGAGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS CAA 72 bp | TTGCACAGGCAGTTCCCGACCCAGCACCTCCAGCTCTaGGCGAGTACAGCCAGAGCTTTGGAGAAAGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LHRQFPTQHLQL*ASTARALEKAE Trigger: TTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTGGGTCGGGAACTGCCTGTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
||
| CDS CCA 72 bp | AGCACCTCCAGCTCTTGGCGAGTACAGCCAGAGCTTTaGAGAAAGCCGAACACCAGCAGGTCTGTGATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: STSSSWRVQPEL*RKPNTSRSVMC Trigger: GCACATCACAGACCTGCTGGTGTTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
||
| CDS CCA 72 bp | GCGGCTAGCTGTCTCACCAGTGTGGGCTGGATGTTGTaGTCCATCTCATCGCCTATTTGGGCGAGATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AASCLTSVGWML*SISSPIWARCL Trigger: CAGACATCTCGCCCAAATAGGCGATGAGATGGACCACAACATCCAGCCCACACTGGTGAGACAGCTAGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CCA 72 bp | CTCTGGGGAAGGCTGTCTTCACCTCATCAAGGGCTTTaGCCAGGCAGTTCCTTTTGTCTTCCTCCGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWGRLSSPHQGL*PGSSFCLPPTG Trigger: GCCTGTCGGAGGAAGACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGTGAAGACAGCCTTCCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CAA 72 bp | CAGCACCTCCAGCTCTTGGCGAGTACAGCCAGAGCTTaGGAGAAAGCCGAACACCAGCAGGTCTGTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: QHLQLLASTARA*EKAEHQQVCDV Trigger: CACATCACAGACCTGCTGGTGTTCGGCTTTCTCCAAAGCTCTGGCTGTACTCGCCAAGAGCTGGAGGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004560.12 ENSMUST00000145948.2 ENSMUST00000160684.8 |
||
| CDS CCA 72 bp | ATGAACTGTGCGGCTAGCTGTCTCACCAGTGTGGGCTaGATGTTGTGGTCCATCTCATCGCCTATTTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: MNCAASCLTSVG*MLWSISSPIWA Trigger: CGCCCAAATAGGCGATGAGATGGACCACAACATCCAGCCCACACTGGTGAGACAGCTAGCCGCACAGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CAA 72 bp | TCTCTGGGGAAGGCTGTCTTCACCTCATCAAGGGCTTaGGCCAGGCAGTTCCTTTTGTCTTCCTCCGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGKAVFTSSRA*ARQFLLSSSDR Trigger: CCTGTCGGAGGAAGACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGTGAAGACAGCCTTCCCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CAA 90 bp | TTCTCCATGTCTCTGGGGAAGGCTGTCTTCACCTCATCAAGGGCTTaGGCCAGGCAGTTCCTTTTGTCTTCCTCCGACAGGCTGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: FSMSLGKAVFTSSRA*ARQFLLSSSDRLPF Trigger: GAATGGCAGCCTGTCGGAGGAAGACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGTGAAGACAGCCTTCCCCAGAGACATGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS TCA 72 bp | CCTGACTTTCAGAATCTGGCTCTATTCTTCCTTGGTTaGAGGAGCGGCTGGCCTGGCTGCCATCTGTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PDFQNLALFFLG*RSGWPGCHLSA Trigger: TGCAGACAGATGGCAGCCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAGAGCCAGATTCTGAAAGTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS TCA 72 bp | AGTTCCTTTTGTCTTCCTCCGACAGGCTGCCATTCATaGACTGTGCGGCTAGCTGTCTCACCAGTGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSFCLPPTGCHS*TVRLAVSPVWA Trigger: AGCCCACACTGGTGAGACAGCTAGCCGCACAGTTCATGAATGGCAGCCTGTCGGAGGAAGACAAAAGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CCA 72 bp | TCATTATCAGCATGGCCTTGTCGTTCTCCATGTCTCTaGGGAAGGCTGTCTTCACCTCATCAAGGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSAWPCRSPCL*GRLSSPHQGLW Trigger: CCAAAGCCCTTGATGAGGTGAAGACAGCCTTCCCCAGAGACATGGAGAACGACAAGGCCATGCTGATAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
||
| CDS CAA 72 bp | TTCTTCCTGACTTTCAGAATCTGGCTCTATTCTTCCTaGGTTGAAGGAGCGGCTGGCCTGGCTGCCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: FFLTFRIWLYSS*VEGAAGLAAIC Trigger: ACAGATGGCAGCCAGGCCAGCCGCTCCTTCAACCAAGGAAGAATAGAGCCAGATTCTGAAAGTCAGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS CAA 72 bp | TTCACCTCATCAAGGGCTTTGGCCAGGCAGTTCCTTTaGTCTTCCTCCGACAGGCTGCCATTCATGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: FTSSRALARQFL*SSSDRLPFMNC Trigger: ACAGTTCATGAATGGCAGCCTGTCGGAGGAAGACAAAAGGAACTGCCTGGCCAAAGCCCTTGATGAGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS CAA 90 bp | TCTCACCAGTGTGGGCTGGATGTTGTGGTCCATCTCATCGCCTATTaGGGCGAGATGTCTGGCAATGTTGTGGATGATTTCTTCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: SHQCGLDVVVHLIAY*GEMSGNVVDDFFLT Trigger: AGTCAGGAAGAAATCATCCACAACATTGCCAGACATCTCGCCCAAATAGGCGATGAGATGGACCACAACATCCAGCCCACACTGGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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| CDS CAA 72 bp | TTTTTGGCCAACAGCATGGTCATTATCAGCATGGCCTaGTCGTTCTCCATGTCTCTGGGGAAGGCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLANSMVIISMA*SFSMSLGKAVF Trigger: GAAGACAGCCTTCCCCAGAGACATGGAGAACGACAAGGCCATGCTGATAATGACCATGCTGTTGGCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004560.12 ENSMUST00000160684.8 |
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