RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICRAL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036568

Ensembl transcript IDs: ENSMUST00000040624.7, ENSMUST00000233455.2, ENSMUST00000233537.2

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTTTGCAGCATCGCACAGCACTGGATGTCAGGAGGATGCTCTGTaGCTGTGCTCCTGGCGTCTTAGCCAGGGCGGTGGGCTTCCAGGC +
Preference number: 1 (lower is better)
Translates to: AFAASHSTGCQEDAL*LCSWRLSQGGGLPG
Trigger: GCCTGGAAGCCCACCGCCCTGGCTAAGACGCCAGGAGCACAGCCACAGAGCATCCTCCTGACATCCAGTGCTGTGCGATGCTGCAAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR GCA 90 bp GCTACCTCTGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTTaGAGACACAGCACTGTGGGCCATTACCACACAGGAAGAAGCAAG +
Preference number: 1 (lower is better)
Translates to: ATSGSQRLMETWEEG*RHSTVGHYHTGRSK
Trigger: CTTGCTTCTTCCTGTGTGGTAATGGCCCACAGTGCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 90 bp GCCAGGACATGGCCCCCTGTCTCCTGCCTCGGTTCCTTCCTTCAGTaGCCTGCTGGTTGTGACCTTTGGTTTACTGTGTTTGGGAATGAA +
Preference number: 1 (lower is better)
Translates to: ARTWPPVSCLGSFLQ*PAGCDLWFTVFGNE
Trigger: TTCATTCCCAAACACAGTAAACCAAAGGTCACAACCAGCAGGCCACTGAAGGAAGGAACCGAGGCAGGAGACAGGGGGCCATGTCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 90 bp AACTCGAAGACAGCCCAGACTCTTCTAGTTTGGTTGGCTGGGCTGTaGGCGGGAGAAGGTCCATCGCTCTCAAAGACTGGCTGTCTCACA +
Preference number: 1 (lower is better)
Translates to: NSKTAQTLLVWLAGL*AGEGPSLSKTGCLT
Trigger: TGTGAGACAGCCAGTCTTTGAGAGCGATGGACCTTCTCCCGCCCACAGCCCAGCCAACCAAACTAGAAGAGTCTGGGCTGTCTTCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 90 bp GGGCTGGTCAGGGAGAGTCTTCCCTACGCAGATACCCTCTCCCCCTaGAACAGAACAAAACCAAACCACTACTTTGGAGCTGCAGTGAGA +
Preference number: 1 (lower is better)
Translates to: GLVRESLPYADTLSP*NRTKPNHYFGAAVR
Trigger: TCTCACTGCAGCTCCAAAGTAGTGGTTTGGTTTTGTTCTGTTCCAGGGGGAGAGGGTATCTGCGTAGGGAAGACTCTCCCTGACCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 90 bp AACGAAGCAGAGGAGATCAACGGATGCATTTACACAGCCTGGGGATaGACAGAGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGG +
Preference number: 1 (lower is better)
Translates to: NEAEEINGCIYTAWG*TEGGSPHRHQSYLW
Trigger: CCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCTCTGTTCATCCCCAGGCTGTGTAAATGCATCCGTTGATCTCCTCTGCTTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR GCA 90 bp GAATTCAGCACGAATGTGTTGAAGACAAACACAAGGCTTTGCTTTTaGAGCATCGCACAGCACTGGATGTCAGGAGGATGCTCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: EFSTNVLKTNTRLCF*SIAQHWMSGGCSVA
Trigger: AGCCACAGAGCATCCTCCTGACATCCAGTGCTGTGCGATGCTGCAAAAGCAAAGCCTTGTGTTTGTCTTCAACACATTCGTGCTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 90 bp AACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACACTTaGAATGTGGAGGGCCTATCGGACTGCTTTCTAGAGAGAGGTGGG +
Preference number: 1 (lower is better)
Translates to: NKLTNNNGRKHFRNT*NVEGLSDCFLERGG
Trigger: CCCACCTCTCTCTAGAAAGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR TCA 90 bp TGGCCTGCTGGTTGTGACCTTTGGTTTACTGTGTTTGGGAATGAATaGCTGATACTGTTGACTACTATTCTCACGAACAAGGCCAGAGTC +
Preference number: 1 (lower is better)
Translates to: WPAGCDLWFTVFGNE*LILLTTILTNKARV
Trigger: GACTCTGGCCTTGTTCGTGAGAATAGTAGTCAACAGTATCAGTCATTCATTCCCAAACACAGTAAACCAAAGGTCACAACCAGCAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 90 bp AGATACCCTCTCCCCCTGGAACAGAACAAAACCAAACCACTACTTTaGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTT +
Preference number: 1 (lower is better)
Translates to: RYPLPLEQNKTKPLL*SCSEKVFKSVLFDF
Trigger: AAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTAGTGGTTTGGTTTTGTTCTGTTCCAGGGGGAGAGGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR GCA 90 bp TCCAGAACTAAAGGGTTTCCTTATCGTAATTGCCAGTTCAAAATTTaGTTCATCTTTAGGCAGTACTTAAGGACACAGAAAATCAATGCG +
Preference number: 1 (lower is better)
Translates to: SRTKGFPYRNCQFKI*FIFRQYLRTQKINA
Trigger: CGCATTGATTTTCTGTGTCCTTAAGTACTGCCTAAAGATGAAGCAAATTTTGAACTGGCAATTACGATAAGGAAACCCTTTAGTTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGGATGCTCTGTGGCTGTaGTCCTGGCGTCTTAGCCAG +
Preference number: 2 (lower is better)
Translates to: RWPLRQSASLQQWGLGSEDALWL*SWRLSQ
Trigger: CTGGCTAAGACGCCAGGAGCACAGCCACAGAGCATC...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGACACGGAGACCCCGGTaGCTCCCCAACTCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: QVATEHALVQARTEGRMRTRRPR*LPNSLP
Trigger: AGGCAGCGAGTTGGGGAGGCACCGGGGTCTCCGTGT...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGGCAGACACAGCACTGTaGGCCATTACCACACAGGAA +
Preference number: 2 (lower is better)
Translates to: RWPLRQSASLQQWGLGSEADTAL*AITTQE
Trigger: TTCCTGTGTGGTAATGGCCCACAGTGCTGTGTCTGC...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR TCA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGTGCTTGGCTAAGGGCTaGGGGAAAGGGGACAACGAG +
Preference number: 2 (lower is better)
Translates to: QVATEHALVQARTEGRMRCLAKG*GKGDNE
Trigger: CTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCA...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp GGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGCAGATACCGGAGCCGTTTCCATTTaGTTTGCTGGGAGAGAGTGT +
Preference number: 2 (lower is better)
Translates to: GYPPLSGLVRESLPYADTGAVSI*FAGREC
Trigger: ACACTCTCTCCCAGCAAAGCAAATGGAAACGGCTCC...GGTATCTGCGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp GGCGGTGGGCTTCCAGGCAGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCACCACTACTTTGGAGCTaGAGTGAGAAAGTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: GGGLPGRAPATHHSAGWSPLLWS*SEKVFK
Trigger: TTTAAAGACTTTCTCACTGCAGCTCCAAAGTAGTGG...TGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCTGCCTGGAAGCCCACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGACAAACACAAGGCTTTaGTTTTGCAGCATCGCACAG +
Preference number: 2 (lower is better)
Translates to: RWPLRQSASLQQWGLGSETNTRL*FCSIAQ
Trigger: CTGTGCGATGCTGCAAAAGCAAAGCCTTGTGTTTGT...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR TCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGTCAGCACGAATGTGTTaGAGACAAACACAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: RWPLRQSASLQQWGLGSESARMC*RQTQGF
Trigger: AAAGCCTTGTGTTTGTCTTCAACACATTCGTGCTGA...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CCA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGCAGGAGGATGCTCTGTaGCTGTGCTCCTGGCGTCTT +
Preference number: 2 (lower is better)
Translates to: REEALTGIKATSGSQRLMQEDAL*LCSWRL
Trigger: AAGACGCCAGGAGCACAGCCACAGAGCATCCTCCTG...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 90 bp AGCTACCTCTGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTaGCAGACACAGCACTGTGGGCCATTACCACACAGGAAGAAGCAA +
Preference number: 2 (lower is better)
Translates to: SYLWIPEVDGDVGGG*QTQHCGPLPHRKKQ
Trigger: TTGCTTCTTCCTGTGTGGTAATGGCCCACAGTGCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAGAGGACCAAGCAGGCTaGAGACAGACGGGAGCCGTT +
Preference number: 2 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTEDQAG*RQTGAV
Trigger: AACGGCTCCCGTCTGTCTCCAGCCTGCTTGGTCCTC...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR-3UTR CCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGGAGGACCAAGCAGGCTaGAGACAGACGGGAGCCGTT +
Preference number: 2 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKEDQAG*RQTGAV
Trigger: AACGGCTCCCGTCTGTCTCCAGCCTGCTTGGTCCTC...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR TCA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGGTGGCCTGCTGGTTGTaGCCTTTGGTTTACTGTGTT +
Preference number: 2 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLVACWL*PLVYCV
Trigger: AACACAGTAAACCAAAGGTCACAACCAGCAGGCCAC...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGAGGGCCTATCGGACTaGTTTCTAGAGAGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKEGLSD*FLERGG
Trigger: CCCACCTCTCTCTAGAAAGCAGTCCGATAGGCCCTC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR CAA 90 bp AGAATTCAGCACGAATGTGTTGAAGACAAACACAAGGCTTTGCTTTaGCAGCATCGCACAGCACTGGATGTCAGGAGGATGCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: RIQHECVEDKHKALL*QHRTALDVRRMLCG
Trigger: GCCACAGAGCATCCTCCTGACATCCAGTGCTGTGCGATGCTGCAAAAGCAAAGCCTTGTGTTTGTCTTCAACACATTCGTGCTGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACAGTAACACTTGAAATGTaGAGGGCCTATCGGACTGCT +
Preference number: 2 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTVTLEM*RAYRTA
Trigger: AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTAC...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACAGATACCCTCTCCCCCTaGAACAGAACAAAACCAAAC +
Preference number: 2 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTDTLSP*NRTKPN
Trigger: GTTTGGTTTTGTTCTGTTCCAGGGGGAGAGGGTATC...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 90 bp TCAGACAGAATTCAGCACGAATGTGTTGAAGACAAACACAAGGCTTaGCTTTTGCAGCATCGCACAGCACTGGATGTCAGGAGGATGCTC +
Preference number: 2 (lower is better)
Translates to: SDRIQHECVEDKHKA*LLQHRTALDVRRML
Trigger: GAGCATCCTCCTGACATCCAGTGCTGTGCGATGCTGCAAAAGCAAAGCCTTGTGTTTGTCTTCAACACATTCGTGCTGAATTCTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR TCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCCACTTTCGTAACACTTaGAATGTGGAGGGCCTATCG +
Preference number: 2 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCHFRNT*NVEGLS
Trigger: CGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTG...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR-3UTR TCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGAACACAGTTTTTAAGTaGAAGCCTTTTGATGCTTGG +
Preference number: 2 (lower is better)
Translates to: EEALTGIKATSGSQRLMENTVFK*KPFDAW
Trigger: CCAAGCATCAAAAGGCTTTCACTTAAAAACTGTGTT...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGGAGCCGTTTCCATTTaGTTTGCTGGGAGAGAGTGT +
Preference number: 2 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKGAVSI*FAGREC
Trigger: ACACTCTCTCCCAGCAAAGCAAATGGAAACGGCTCC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACACTTTCGTAACACTTaGAATGTGGAGGGCCTATCG +
Preference number: 2 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQHFRNT*NVEGLS
Trigger: CGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR-3UTR GCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGCATGACGACATGTATTaGTCTTCAAAAGAACAGGGT +
Preference number: 2 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKHDDMY*SSKEQG
Trigger: ACCCTGTTCTTTTGAAGAGCAATACATGTCGTCATG...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 90 bp CCTTTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTaGAATGGAACAGAATTCAGCGATAATAAAGAACATAGGTTATGT +
Preference number: 2 (lower is better)
Translates to: PFDAWLRAEGKGTTR*NGTEFSDNKEHRLC
Trigger: ACATAACCTATGTTCTTTATTATCGCTGAATTCTGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR GCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTCATGACGACATGTATTaGTCTTCAAAAGAACAGGGT +
Preference number: 2 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIHDDMY*SSKEQG
Trigger: ACCCTGTTCTTTTGAAGAGCAATACATGTCGTCATG...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR CCA 72 bp GAGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTaGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: EGGSPHRHQSYL*IPEVDGDVGGG
Trigger: CCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR GCA 72 bp GGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTTaGAGACACAGCACTGTGGGCCATTACCACACAGGA +
Preference number: 3 (lower is better)
Translates to: GSQRLMETWEEG*RHSTVGHYHTG
Trigger: TCCTGTGTGGTAATGGCCCACAGTGCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp ACAGCCCAGACTCTTCTAGTTTGGTTGGCTGGGCTGTaGGCGGGAGAAGGTCCATCGCTCTCAAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: TAQTLLVWLAGL*AGEGPSLSKTG
Trigger: GCCAGTCTTTGAGAGCGATGGACCTTCTCCCGCCCACAGCCCAGCCAACCAAACTAGAAGAGTCTGGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp AAAGCTACCTCTGGATCCCAGAGGTTGATGGAGACGTaGGAGGAGGGTTGCAGACACAGCACTGTGGGCCAT +
Preference number: 3 (lower is better)
Translates to: KATSGSQRLMET*EEGCRHSTVGH
Trigger: ATGGCCCACAGTGCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGTAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp CTCGAAGACAGCCCAGACTCTTCTAGTTTGGTTGGCTaGGCTGTGGGCGGGAGAAGGTCCATCGCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: LEDSPDSSSLVG*AVGGRRSIALK
Trigger: TTTGAGAGCGATGGACCTTCTCCCGCCCACAGCCCAGCCAACCAAACTAGAAGAGTCTGGGCTGTCTTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp AAGGACAACTCGAAGACAGCCCAGACTCTTCTAGTTTaGTTGGCTGGGCTGTGGGCGGGAGAAGGTCCATCG +
Preference number: 3 (lower is better)
Translates to: KDNSKTAQTLLV*LAGLWAGEGPS
Trigger: CGATGGACCTTCTCCCGCCCACAGCCCAGCCAACCAAACTAGAAGAGTCTGGGCTGTCTTCGAGTTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 72 bp AGACCCCGGTGCCTCCCCAACTCGCTGCCTTACAACTaGCTTCCACTGTTCCCTAGTGAGCCTGTGAGAATT +
Preference number: 3 (lower is better)
Translates to: RPRCLPNSLPYN*LPLFPSEPVRI
Trigger: AATTCTCACAGGCTCACTAGGGAACAGTGGAAGTCAGTTGTAAGGCAGCGAGTTGGGGAGGCACCGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 72 bp TCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTaGTGGAGACGTGGGAGGAGGGTTGCAGACACAGCA +
Preference number: 3 (lower is better)
Translates to: SQASKLPLDPRG*WRRGRRVADTA
Trigger: TGCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 72 bp TGTGGGACTAATGTCATGGTGAGAAGCCCTGTAACCTaGCACACAGGAGAGAAAACTAGGGCCAGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: CGTNVMVRSPVT*HTGEKTRARAG
Trigger: CCCGGCCCTGGCCCTAGTTTTCTCTCCTGTGTGTCAGGTTACAGGGCTTCTCACCATGACATTAGTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp TGGCCCCCTGTCTCCTGCCTCGGTTCCTTCCTTCAGTaGCCTGCTGGTTGTGACCTTTGGTTTACTGTGTTT +
Preference number: 3 (lower is better)
Translates to: WPPVSCLGSFLQ*PAGCDLWFTVF
Trigger: AAACACAGTAAACCAAAGGTCACAACCAGCAGGCCACTGAAGGAAGGAACCGAGGCAGGAGACAGGGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 72 bp AACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATaGGGGCCACTCCCGGAAAGGAACAAAAATAATAAA +
Preference number: 3 (lower is better)
Translates to: NTPWCRPAQREG*GPLPERNKNNK
Trigger: TTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CAA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGGACAAACACAAGGCTTaGCTTTTGCAGCATCGCACA +
Preference number: 3 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLDKHKA*LLQHRT
Trigger: TGTGCGATGCTGCAAAAGCAAAGCCTTGTGTTTGTC...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CAA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGAAGTGTACTGTGGTCTaGAGCGACAGTGCTAAGAAA +
Preference number: 3 (lower is better)
Translates to: REEALTGIKATSGSQRLMKCTVV*SDSAKK
Trigger: TTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp AGGGAGAGTCTTCCCTACGCAGATACCCTCTCCCCCTaGAACAGAACAAAACCAAACCACTACTTTGGAGCT +
Preference number: 3 (lower is better)
Translates to: RESLPYADTLSP*NRTKPNHYFGA
Trigger: AGCTCCAAAGTAGTGGTTTGGTTTTGTTCTGTTCCAGGGGGAGAGGGTATCTGCGTAGGGAAGACTCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CAA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACACCGTTTCCATTTGCTTaGCTGGGAGAGAGTGTAACT +
Preference number: 3 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTPFPFA*LGESVT
Trigger: AGTTACACTCTCTCCCAGCAAAGCAAATGGAAACGG...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 72 bp ACGAACAACAATGGCCGTAAGCACTTTCGTAACACTTaGAATGTGGAGGGCCTATCGGACTGCTTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: TNNNGRKHFRNT*NVEGLSDCFLE
Trigger: CTCTAGAAAGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR GCA 72 bp TTCAGCACGAATGTGTTGAAGACAAACACAAGGCTTTaGTTTTGCAGCATCGCACAGCACTGGATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: FSTNVLKTNTRL*FCSIAQHWMSG
Trigger: TCCTGACATCCAGTGCTGTGCGATGCTGCAAAAGCAAAGCCTTGTGTTTGTCTTCAACACATTCGTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CCA 72 bp ACACTCTACATGATGACCATAGGGACAACTCCATTTTaGGGGTATAACGAAGCAGAGGAGATCAACGGATGC +
Preference number: 3 (lower is better)
Translates to: TLYMMTIGTTPF*GYNEAEEINGC
Trigger: GCATCCGTTGATCTCCTCTGCTTCGTTATACCCCCAAAATGGAGTTGTCCCTATGGTCATCATGTAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR-3UTR CAA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACCGTTTCCATTTGCTTaGCTGGGAGAGAGTGTAACT +
Preference number: 3 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQPFPFA*LGESVT
Trigger: AGTTACACTCTCTCCCAGCAAAGCAAATGGAAACGG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR TCA 72 bp CAGACCATTCTCAGACAGAATTCAGCACGAATGTGTTaGAGACAAACACAAGGCTTTGCTTTTGCAGCATCG +
Preference number: 3 (lower is better)
Translates to: QTILRQNSARMC*RQTQGFAFAAS
Trigger: CGATGCTGCAAAAGCAAAGCCTTGTGTTTGTCTTCAACACATTCGTGCTGAATTCTGTCTGAGAATGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR TCA 72 bp GGTTGTGACCTTTGGTTTACTGTGTTTGGGAATGAATaGCTGATACTGTTGACTACTATTCTCACGAACAAG +
Preference number: 3 (lower is better)
Translates to: GCDLWFTVFGNE*LILLTTILTNK
Trigger: CTTGTTCGTGAGAATAGTAGTCAACAGTATCAGTCATTCATTCCCAAACACAGTAAACCAAAGGTCACAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR GCA 72 bp CTGGAACAGAACAAAACCAAACCACTACTTTGGAGCTaGAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: LEQNKTKPLLWS*SEKVFKSVLFD
Trigger: ATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTAGTGGTTTGGTTTTGTTCTGTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp GGCGGTGGGCTTCCAGGCAGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCATCTCTAGGCTCTTGGTaGGCTGGAGATCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGLPGRAPATHHSAGWSSLGSW*AGDLAG
Trigger: CCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGA...TGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCTGCCTGGAAGCCCACCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp ACCTCTGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTTGCAGACACAGCCCGGAGAGCACCTGCTaGCCTTGGCAGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TSGSQRLMETWEEGCRHSPESTC*PWQGPS
Trigger: GGAGGGACCCTGCCAAGGTCAGCAGGTGCTCTCCGG...GCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGGTGCCGCTCACTGCCTaGGAGGTGACAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTVPLTA*EVTGFL
Trigger: GAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCAC...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGTCGTTGCTTCTGCCATaGCTGGCTTGGCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RWPLRQSASLQQWGLGSESLLLP*LAWLGL
Trigger: GAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGA...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGATCCCCTGCTGGGCATaGTGCTGCTGGATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTIPCWA*CCWIPR
Trigger: CCTTGGGATCCAGCAGCACCATGCCCAGCAGGGGAT...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp ACCTCTGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTTGCAGACACAGCCGCTCACCGCGGGCATaGTGGCGAAGCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSGSQRLMETWEEGCRHSRSPRA*WRSLAF
Trigger: GAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCG...GCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGGGAGCGAGCTGGTTTTaGTGCGATGCTGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTGASWF*CDAGHS
Trigger: GGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCC...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GGCGGTGGGCTTCCAGGCAGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCATTTATAGCCTGGACATaGTGCACCGAGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GGGLPGRAPATHHSAGWSFIAWT*CTELEL
Trigger: CAGCTCCAACTCGGTGCACCATGTCCAGGCTATAAA...TGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCTGCCTGGAAGCCCACCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGACAGGTGTAACACGGTaGGTGAGGCCTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTTGVTR*VRPAAR
Trigger: CCTTGCAGCAGGCCTCACCCACCGTGTTACACCTGT...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GGCGGTGGGCTTCCAGGCAGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCATCTTGGATGTGGGAATaGGGGAGGTCTGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GGGLPGRAPATHHSAGWSSWMWE*GRSGSN
Trigger: GTTTGAACCAGACCTCCCCCATTCCCACATCCAAGA...TGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCTGCCTGGAAGCCCACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGTGCTGGGCATGGTGCTaGTGGATCCCAAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTCWAWC*WIPRLF
Trigger: GAACAACCTTGGGATCCAGCAGCACCATGCCCAGCA...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGCTGTGGTCTTGGATGTaGGAATGGGGGAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTLWSWM*EWGRSG
Trigger: ACCAGACCTCCCCCATTCCCACATCCAAGACCACAG...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGATGTTCACAGACATGTaGGGCCCAACCACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QVATEHALVQARTEGRMRMFTDM*GPTTEP
Trigger: GGGCTCCGTGGTTGGGCCGCACATGTCTGTGAACAT...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 72 bp CAGGCTGGAGACAGACGGGAGCCGTTTCCATTTGCTTaGCTGGGAGAGAGTGTAACTGGTCCGGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QAGDRREPFPFA*LGESVTGPGQG
Trigger: ACCCTGCCCCGGACCAGTTACACTCTCTCCCAGCAAAGCAAATGGAAACGGCTCCCGTCTGTCTCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGACATTAGATGGGGCTTaGTGCCCACTGCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTTLDGA*CPLPFS
Trigger: ACTGAAAGGCAGTGGGCAGCAAGCCCCATCTAATGT...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp GGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGCAGATACCATAGCCTGGACATGGTaGACCGAGTTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: GYPPLSGLVRESLPYADTIAWTW*TELELT
Trigger: TGTCAGCTCCAACTCGGTGCACCATGTCCAGGCTAT...GGTATCTGCGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACAGAGCGGGTCCTGCCATaGCGCTCACCGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTERVLP*RSPRAW
Trigger: CCATGCCCGCGGTGAGCGGCATGGCAGGACCCGCTC...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGCAGATACCCTGGACTTCCAGAGGTaGCAAAAGTCTGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: GYPPLSGLVRESLPYADTLDFQR*QKSAQT
Trigger: TGTCTGGGCAGACTTTTGCCACCTCTGGAAGTCCAG...GGTATCTGCGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGGGTGCAAGACCCCTTTaGATAATGATGTTATGCACG +
Preference number: 4 (lower is better)
Translates to: RWPLRQSASLQQWGLGSEGARPL*IMMLCT
Trigger: CGTGCATAACATCATTATTCAAAGGGGTCTTGCACC...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTCGCTCACCGCGGGCATaGTGGCGAAGCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTARSPRA*WRSLAF
Trigger: GAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCG...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGCTGCCATGCCTGGCTTaGCTCGGTCTCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLLPCLA*LGLCFG
Trigger: CCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAG...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGCAGCTGCTTCTAAAATaGAGTCCGTTTCTACAACGC +
Preference number: 4 (lower is better)
Translates to: RWPLRQSASLQQWGLGSEQLLLK*SPFLQR
Trigger: GCGTTGTAGAAACGGACTCCATTTTAGAAGCAGCTG...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 72 bp TGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTaGCAGACACAGCACTGTGGGCCATTACCACACAGG +
Preference number: 4 (lower is better)
Translates to: WIPEVDGDVGGG*QTQHCGPLPHR
Trigger: CCTGTGTGGTAATGGCCCACAGTGCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAGCTCCAACAGGCACGTaGGTCACCCCGATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTAPTGT*VTPIGC
Trigger: GCAGCCTATCGGGGTGACTCACGTGCCTGTTGGAGC...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCCATGGGGGAATGGATaGCGATGCTGCCCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTPWGNG*RCCPLC
Trigger: GCACAGGGGGCAGCATCGTCATCCATTCCCCCATGG...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CAGGGCGTACACCTGGGGCTAAGAACAGACCATTCTCAGACAGAATTCAGCACGGAGCCCAGGGATCTGTaGTGGCCTCAAGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: QGVHLGLRTDHSQTEFSTEPRDL*WPQAVC
Trigger: ACAGACGGCTTGAGGCCATCACAGATCCCTGGGCTC...CGTGCTGAATTCTGTCTGAGAATGGTCTGTTCTTAGCCCCAGGTGTACGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCCCGGAGAGCACCTGCTaGCCTTGGCAGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCPESTC*PWQGPS
Trigger: GGAGGGACCCTGCCAAGGTCAGCAGGTGCTCTCCGG...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACAGTGGGTGAGGCCTGCTaGAAGGGCATCTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTVGEAC*KGICPP
Trigger: CGGGGGACAGATGCCCTTGCAGCAGGCCTCACCCAC...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAACGGTGGGTGAGGCCTaGTGCAAGGGCATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTTVGEA*CKGICP
Trigger: GGGACAGATGCCCTTGCAGCAGGCCTCACCCACCGT...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp ACCTCTGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTTGCAGACACAGCCTGTTAGGCAAATGCTaGCTGGGAACACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: TSGSQRLMETWEEGCRHSLLGKC*LGTLIP
Trigger: GGGGATCAGTGTTCCCAGCCAGCATTTGCCTAACAG...GCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGCCCACTCACATTAGATaGGGCTTGCTGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLPTHIR*GLLPTA
Trigger: GGCAGTGGGCAGCAAGCCCCATCTAATGTGAGTGGG...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGCAGATACCCATCTGGACCGGCTTTaGCTGGATATTAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: GYPPLSGLVRESLPYADTHLDRL*LDINWD
Trigger: GTCCCAATTAATATCCAGCCAAAGCCGGTCCAGATG...GGTATCTGCGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGCTCAGCGCTTTGTCCTaGAAGGAGTCGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: EEALTGIKATSGSQRLMELSALS*KESRQG
Trigger: GCCCTGTCTCGACTCCTTCCAGGACAAAGCGCTGAG...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 72 bp CTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTaGATGGAGACGTGGGAGGAGGGTTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: LTGIKATSGSQR*METWEEGCRHS
Trigger: GCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp ACCTCTGGATCCCAGAGGTTGATGGAGACGTGGGAGGAGGGTTGCAGACACAGCCAACAGAAATCGGCCTaGAAACCCTCAGGATCTACG +
Preference number: 4 (lower is better)
Translates to: TSGSQRLMETWEEGCRHSQQKSA*KPSGST
Trigger: CGTAGATCCTGAGGGTTTTCAGGCCGATTTCTGTTG...GCTGTGTCTGCAACCCTCCTCCCACGTCTCCATCAACCTCTGGGATCCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAGAGCGGGTCCTGCCATaGCGCTCACCGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQERVLP*RSPRAW
Trigger: CCATGCCCGCGGTGAGCGGCATGGCAGGACCCGCTC...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACATGGCCCATGGGGGAATaGATGACGATGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTWPMGE*MTMLPP
Trigger: AGGGGGCAGCATCGTCATCCATTCCCCCATGGGCCA...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGTCCAGAATCCTGTCCTaGCAGTGCGGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLSRILS*QCGAQE
Trigger: CTCTTGAGCACCGCACTGCCAGGACAGGATTCTGGA...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGACCTGCACAGCTGTCTaGCTCGGGGATGATCCAACT +
Preference number: 4 (lower is better)
Translates to: EEALTGIKATSGSQRLMETCTAV*LGDDPT
Trigger: AGTTGGATCATCCCCGAGCCAGACAGCTGTGCAGGT...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGTCGGGTGTCACAGCATaGGCTTGGTCCCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLSGVTA*AWSLCN
Trigger: GTTACAGAGGGACCAAGCCCATGCTGTGACACCCGA...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
3UTR CAA 72 bp AAAGGACAACTCGAAGACAGCCCAGACTCTTCTAGTTaGGTTGGCTGGGCTGTGGGCGGGAGAAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: KGQLEDSPDSSS*VGWAVGGRRSI
Trigger: GATGGACCTTCTCCCGCCCACAGCCCAGCCAACCAAACTAGAAGAGTCTGGGCTGTCTTCGAGTTGTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGCTCTTTCCTCCTGGTTaGACATCCTGTCAATCATCA +
Preference number: 4 (lower is better)
Translates to: QVATEHALVQARTEGRMRLFPPG*TSCQSS
Trigger: TGATGATTGACAGGATGTTCAACCAGGAGGAAAGAG...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGAAACTGAAGGCTGCTTaGAAGCGGCAGCCCATCACT +
Preference number: 4 (lower is better)
Translates to: EEALTGIKATSGSQRLMEKLKAA*KRQPIT
Trigger: AGTGATGGGCTGCCGCTTGCAAGCAGCCTTCAGTTT...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGTGGGTGAGGCCTGCTaGAAGGGCATCTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKVGEAC*KGICPP
Trigger: CGGGGGACAGATGCCCTTGCAGCAGGCCTCACCCAC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGTGGGAAACACTGCTCTaGCCAGGTGACAGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: EEALTGIKATSGSQRLMEWETLL*PGDRCN
Trigger: GTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCA...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp CAGGGCGTACACCTGGGGCTAAGAACAGACCATTCTCAGACAGAATTCAGCACGGGGTGTTGCTCAAGGTaGTGGGGGATTTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QGVHLGLRTDHSQTEFSTGCCSR*WGIWKQ
Trigger: CTGCTTCCAAATCCCCCAGCACCTTGAGCAACACCC...CGTGCTGAATTCTGTCTGAGAATGGTCTGTTCTTAGCCCCAGGTGTACGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTATCCTGTCCTGGCAGTaGGGTGCTCAAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAILSWQ*GAQEPR
Trigger: CCTGGGCTCTTGAGCACCGCACTGCCAGGACAGGAT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTGAGACTGGAAGACGGTaGGACACACTGACGGGCGCT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAETGRR*DTLTGA
Trigger: AGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTC...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTAGCCGTCTGTGGTCTTaGATGTGGGAATGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTSRLWS*MWEWGR
Trigger: CCTCCCCCATTCCCACATCCAAGACCACAGACGGCT...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTTCAGGTCTTCCTCCGTaGGCATGGAGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTASGLPP*AWSPGT
Trigger: TGTGCCAGGGCTCCATGCCCACGGAGGAAGACCTGA...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGGAGATCGGGGAGAGGTaGAGACTCAAGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: EEALTGIKATSGSQRLMEEIGER*RLKFIF
Trigger: GAAGATGAACTTGAGTCTTCACCTCTCCCCGATCTC...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGTCATCATGGAAGGCTaGTTACCGAAGGACCCGATT +
Preference number: 4 (lower is better)
Translates to: REEALTGIKATSGSQRLMVIMEG*LPKDPI
Trigger: AATCGGGTCCTTCGGTAATCAGCCTTCCATGATGAC...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGTCGTGTTCTGTTGGTTaGCAATGTTCACAGACATGT +
Preference number: 4 (lower is better)
Translates to: QVATEHALVQARTEGRMRSCSVG*QCSQTC
Trigger: ACATGTCTGTGAACATTGTCAACCAACAGAACACGA...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTTCACTGCCTGCGAGGTaGCAGGCTTTCTCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTSLPAR*QAFSCS
Trigger: AGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGA...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACATCACTGCCTGCGAGGTaGCAGGCTTTCTCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTSLPAR*QAFSCS
Trigger: AGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGA...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAGCACCGAGTTGGAGCTaGCAGAAAGGCTTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTAPSWS*QKGLWV
Trigger: TACCCACAAGCCTTTCTGTCAGCTCCAACTCGGTGC...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAGAGGAGAGGCGTGGTTaGCTATCACTGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTEERRG*LSLDFQ
Trigger: CTGGAAGTCCAGTGATAGTCAACCACGCCTCTCCTC...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTGCGAGCTGGTTTTGCTaGGATGCTGGTCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTASWFC*DAGHSC
Trigger: ACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGC...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCGGCCCCTCCCCAAGCTaGTCACTCACACCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCGPSPS*SLTPLR
Trigger: CCTCAAAGGTGTGAGTGACCAGCTTGGGGAGGGGCC...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CAGGGCGTACACCTGGGGCTAAGAACAGACCATTCTCAGACAGAATTCAGCACGTGGGCATGGTGCTGCTaGATCCCAAGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: QGVHLGLRTDHSQTEFSTWAWCC*IPRLFT
Trigger: TGTGAACAACCTTGGGATCCAGCAGCACCATGCCCA...CGTGCTGAATTCTGTCTGAGAATGGTCTGTTCTTAGCCCCAGGTGTACGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGTGCTCAGAGGCCACTTaGCCAGAGATGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKCSEAT*PEMSWE
Trigger: CTCCCAGCTCATCTCTGGCCAAGTGGCCTCTGAGCA...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACACATGGTGGCGAAGCCTaGCCTTCCCTGGGAAACACT +
Preference number: 4 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTHGGEA*PSLGNT
Trigger: AGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATG...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp CAGGGCGTACACCTGGGGCTAAGAACAGACCATTCTCAGACAGAATTCAGCACGAGGTGCTGGGGGATTTaGAAGCAGAGACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QGVHLGLRTDHSQTEFSTRCWGI*KQRLED
Trigger: GTCTTCCAGTCTCTGCTTCCAAATCCCCCAGCACCT...CGTGCTGAATTCTGTCTGAGAATGGTCTGTTCTTAGCCCCAGGTGTACGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACACTGTGGTCTTGGATGTaGGAATGGGGGAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTLWSWM*EWGRSG
Trigger: ACCAGACCTCCCCCATTCCCACATCCAAGACCACAG...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCCTGCCATGCCTGGCTTaGCTCGGTCTCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCLPCLA*LGLCFG
Trigger: CCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAG...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGCTGCAGTGTCTGACCTaGGTAATTAGAAACATTAGA +
Preference number: 4 (lower is better)
Translates to: QVATEHALVQARTEGRMRLQCLT*VIRNIR
Trigger: TCTAATGTTTCTAATTACTCAGGTCAGACACTGCAG...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACCATGGGGGAATGGATaGCGATGCTGCCCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQPWGNG*RCCPLC
Trigger: GCACAGGGGGCAGCATCGTCATCCATTCCCCCATGG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTGCACCGAGTTGGAGCTaGCAGAAAGGCTTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAAPSWS*QKGLWV
Trigger: TACCCACAAGCCTTTCTGTCAGCTCCAACTCGGTGC...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCTCCTGATTGCTTGCAAACGATaGTCCAACAGGCACGTGAGT +
Preference number: 4 (lower is better)
Translates to: EAGVCYIAQAGLEPVTLLIACKR*SNRHVS
Trigger: ACTCACGTGCCTGTTGGAGCATCGTTTGCAAGCAAT...CAGGAGAGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCATGTTCACAGACATGTaGGGCCCAACCACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCMFTDM*GPTTEP
Trigger: GGGCTCCGTGGTTGGGCCGCACATGTCTGTGAACAT...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGTTCCCTGGGAAACACTaGTCTGCCCAGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKFPGKH*SAQVTG
Trigger: ACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAA...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTTTCCCTGGGAAACACTaGTCTGCCCAGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAFPGKH*SAQVTG
Trigger: ACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAA...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTGCGAGCTGGTTTTGCTaGGATGCTGGTCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAASWFC*DAGHSC
Trigger: ACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGC...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTCGTTGCTTCTGCCATaGCTGGCTTGGCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCSLLLP*LAWLGL
Trigger: GAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGA...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACATGGGCATGGTGCTGCTaGATCCCAAGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTWAWCC*IPRLFT
Trigger: TGTGAACAACCTTGGGATCCAGCAGCACCATGCCCA...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATATCCCCTGCTGGGCATaGTGCTGCTGGATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYIPCWA*CCWIPR
Trigger: CCTTGGGATCCAGCAGCACCATGCCCAGCAGGGGAT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACACTGGACTTCCAGAGGTaGCAAAAGTCTGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTLDFQR*QKSAQT
Trigger: TGTCTGGGCAGACTTTTGCCACCTCTGGAAGTCCAG...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCCCATTGGAGAAAAGCTaGGGAAGTCCAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCPLEKS*GSPGPP
Trigger: CGGCGGACCTGGACTTCCCCAGCTTTTCTCCAATGG...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATTCTCTAGGCTCTTGGTaGGCTGGAGATCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYSLGSW*AGDLAG
Trigger: CCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGA...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGTGTTGCATAAAGCCATaGTGCACACCCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: EEALTGIKATSGSQRLMECCIKP*CTPTVL
Trigger: CAATACAGTGGGTGTGCAGCATGGCTTTATGCAACA...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATAAGGAGATCCCCTGCTaGGCATGGTGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYKEIPC*AWCCWI
Trigger: GATCCAGCAGCACCATGCCCAGCAGGGGATCTCCTT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAAAGGAGATCCCCTGCTaGGCATGGTGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKKEIPC*AWCCWI
Trigger: GATCCAGCAGCACCATGCCCAGCAGGGGATCTCCTT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATGGCCCATGGGGGAATaGATGACGATGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQWPMGE*MTMLPP
Trigger: AGGGGGCAGCATCGTCATCCATTCCCCCATGGGCCA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTGCCCAGACACCAGCTaGACGGCGGTATTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCCPDTS*TAVFWL
Trigger: TAACCAGAATACCGCCGTCCAGCTGGTGTCTGGGCA...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CAGGGCGTACACCTGGGGCTAAGAACAGACCATTCTCAGACAGAATTCAGCACGGTGGTTGACTATCACTaGACTTCCAGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QGVHLGLRTDHSQTEFSTVVDYH*TSRGGK
Trigger: TTTGCCACCTCTGGAAGTCCAGTGATAGTCAACCAC...CGTGCTGAATTCTGTCTGAGAATGGTCTGTTCTTAGCCCCAGGTGTACGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAACAGGTGTAACACGGTaGGTGAGGCCTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKTGVTR*VRPAAR
Trigger: CCTTGCAGCAGGCCTCACCCACCGTGTTACACCTGT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGCGCTGGCGTTCTGTTaGCTTGTGTCAGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKALAFC*LVSAGL
Trigger: GAGACCAGCTGACACAAGCCAACAGAACGCCAGCGC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCACCTGCACAGCTGTCTaGCTCGGGGATGATCCAACT +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCTCTAV*LGDDPT
Trigger: AGTTGGATCATCCCCGAGCCAGACAGCTGTGCAGGT...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAAGCTGGAGATCTGGCTaGGGCTCACCCGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQSWRSG*GSPDPF
Trigger: GAAAGGGTCGGGTGAGCCCCAGCCAGATCTCCAGCT...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACCATTGGAGAAAAGCTaGGGAAGTCCAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKPLEKS*GSPGPP
Trigger: CGGCGGACCTGGACTTCCCCAGCTTTTCTCCAATGG...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR CAA 72 bp TTAGTAGCCATGTGCTGCAGGCATCCAGGGGCCATCTaGAATGGTAACCATGTGGCTATGAGAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LVAMCCRHPGAI*NGNHVAMRRAC
Trigger: ACAGGCTCTTCTCATAGCCACATGGTTACCATTCAAGATGGCCCCTGGATGCCTGCAGCACATGGCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTTCATCTTCAAGAAACTaGAGGCTGCTTGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTASSSRN*RLLASG
Trigger: GCCGCTTGCAAGCAGCCTTCAGTTTCTTGAAGATGA...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAATGCTGGGCATGGTGCTaGTGGATCCCAAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKCWAWC*WIPRLF
Trigger: GAACAACCTTGGGATCCAGCAGCACCATGCCCAGCA...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCATAGCCTGGACATGGTaGACCGAGTTGGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCIAWTW*TELELT
Trigger: TGTCAGCTCCAACTCGGTGCACCATGTCCAGGCTAT...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGGGTGTTGCTCAAGGTaGTGGGGGATTTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKGCCSR*WGIWKQ
Trigger: CTGCTTCCAAATCCCCCAGCACCTTGAGCAACACCC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTCATCTGTCCGGAATATaGTTGGTTGGTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTHLSGI*LVGPEH
Trigger: ATGCTCAGGACCAACCAACCATATTCCGGACAGATG...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACACATCTGTCCGGAATATaGTTGGTTGGTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTHLSGI*LVGPEH
Trigger: ATGCTCAGGACCAACCAACCATATTCCGGACAGATG...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCAGGTGCTGGGGGATTTaGAAGCAGAGACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCRCWGI*KQRLED
Trigger: GTCTTCCAGTCTCTGCTTCCAAATCCCCCAGCACCT...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAAGCCGTCTGTGGTCTTaGATGTGGGAATGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQSRLWS*MWEWGR
Trigger: CCTCCCCCATTCCCACATCCAAGACCACAGACGGCT...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAATCCAGAATCCTGTCCTaGCAGTGCGGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKSRILS*QCGAQE
Trigger: CTCTTGAGCACCGCACTGCCAGGACAGGATTCTGGA...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACAAGGCCTTTTCTGTCCTaGATGACTATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTRPFLS*MTIHLH
Trigger: GTGCAGGTGGATAGTCATCCAGGACAGAAAAGGCCT...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACTCAGCGCTTTGTCCTaGAAGGAGTCGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQLSALS*KESRQG
Trigger: GCCCTGTCTCGACTCCTTCCAGGACAAAGCGCTGAG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAAACATTAGAAGCCTaGGTAAAGGATGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: REEALTGIKATSGSQRLMETLEA*VKDADE
Trigger: TTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTC...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGCACTGCCTTTCAGTATaGTTTGAGAGCCATCGAGGT +
Preference number: 4 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKHCLSV*FESHRG
Trigger: ACCTCGATGGCTCTCAAATCATACTGAAAGGCAGTG...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGTCTACTGTGGCCTTCTaGCTTTTTAGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: REEALTGIKATSGSQRLMSTVAF*LFRNVS
Trigger: GGAAACATTTCTAAAAAGTCAGAAGGCCACAGTAGA...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACACACTGTGGTCCGGGATaGATTTTTCTAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTHCGPG*IFLGSF
Trigger: AAAACTGCCTAGAAAAATTCATCCCGGACCACAGTG...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGGCTGCAGAATACCCTaGGTTCGTCACATCATCGCT +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKGCRIP*VRHIIA
Trigger: AGCGATGATGTGACGAACGCAGGGTATTCTGCAGCC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGACCCACTGTATTGCTTaGAAACGATGCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKTHCIA*KRCSNR
Trigger: CCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGT...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCCTGCTGTTAGGCAAATaGTGGCTGGGAACACTGATC +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCLLLGK*WLGTLI
Trigger: GATCAGTGTTCCCAGCCAGCATTTGCCTAACAGCAG...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTACGGTGGGTGAGGCCTaGTGCAAGGGCATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQITVGEA*CKGICP
Trigger: GGGACAGATGCCCTTGCAGCAGGCCTCACCCACCGT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTGGTCCCTCTGTAACTaGTGGAGGATGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCWSLCN*WRMKAP
Trigger: AGGAGCTTTCATCCTCCAGCAGTTACAGAGGGACCA...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCTGTTAGGCAAATGCTaGCTGGGAACACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYLLGKC*LGTLIP
Trigger: GGGGATCAGTGTTCCCAGCCAGCATTTGCCTAACAG...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTTGGACGGCGGTATTCTaGTTATTAAGCATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAWTAVF*LLSICP
Trigger: CGGACAGATGCTTAATAACCAGAATACCGCCGTCCA...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATGCCCAGACACCAGCTaGACGGCGGTATTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQCPDTS*TAVFWL
Trigger: TAACCAGAATACCGCCGTCCAGCTGGTGTCTGGGCA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTGTTGCTCAAGGTGCTaGGGGATTTGGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCCCSRC*GIWKQR
Trigger: TCTCTGCTTCCAAATCCCCCAGCACCTTGAGCAACA...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACCTGATGGAGCGAGCTaGTTTTGCTGCGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQPDGAS*FCCDAG
Trigger: ACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATTGCAAACTGTTGGCTTaGGCCTATACTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYCKLLA*AYTGIQ
Trigger: CTGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCA...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGCTCCAACAGGCACGTaGGTCACCCCGATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNAPTGT*VTPIGC
Trigger: GCAGCCTATCGGGGTGACTCACGTGCCTGTTGGAGC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAAAACTGAAGGCTGCTTaGAAGCGGCAGCCCATCACT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQKLKAA*KRQPIT
Trigger: AGTGATGGGCTGCCGCTTGCAAGCAGCCTTCAGTTT...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCGCACACCCACTGTATTaGTTGCAAACGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCAHPLY*LQTMLQ
Trigger: TTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGC...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTTGCATAAAGCCATGCTaGACACCCACTGTATTGCTT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTACIKPC*TPTVLL
Trigger: AAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCA...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATTTAGATGGGGCTTGCTaGCCACTGCCTTTCAGTATG +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYLDGAC*PLPFSM
Trigger: CATACTGAAAGGCAGTGGGCAGCAAGCCCCATCTAA...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGTGCCGCTCACTGCCTaGGAGGTGACAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIVPLTA*EVTGFL
Trigger: GAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCAC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATGGGAAACACTGCTCTaGCCAGGTGACAGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQWETLL*PGDRCN
Trigger: GTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTATCCTGTCCTGGCAGTaGGGTGCTCAAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIILSWQ*GAQEPR
Trigger: CCTGGGCTCTTGAGCACCGCACTGCCAGGACAGGAT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTAATCATCACCATCTCTaGAGAGGGGTTGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTANHHHL*RGVDPH
Trigger: ATGAGGATCAACCCCTCTGCAGAGATGGTGATGATT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTAGAAATGTTTCCCTCTaGAGAGACCACGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTARNVSL*RDHDVV
Trigger: AACCACATCGTGGTCTCTGCAGAGGGAAACATTTCT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGTGTCCGGAATATGGTTaGTTGGTCCTGAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKCPEYG*LVLSML
Trigger: TAACATGCTCAGGACCAACCAACCATATTCCGGACA...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTTGTCCGGAATATGGTTaGTTGGTCCTGAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTACPEYG*LVLSML
Trigger: TAACATGCTCAGGACCAACCAACCATATTCCGGACA...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGAGACTGGAAGACGGTaGGACACACTGACGGGCGCT +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIETGRR*DTLTGA
Trigger: AGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAATGTTGCTCAAGGTGCTaGGGGATTTGGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKCCSRC*GIWKQR
Trigger: TCTCTGCTTCCAAATCCCCCAGCACCTTGAGCAACA...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAAGGCCTTTTCTGTCCTaGATGACTATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKRPFLS*MTIHLH
Trigger: GTGCAGGTGGATAGTCATCCAGGACAGAAAAGGCCT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTCAGGTCTTCCTCCGTaGGCATGGAGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQISGLPP*AWSPGT
Trigger: TGTGCCAGGGCTCCATGCCCACGGAGGAAGACCTGA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTAGCTGGAGATCTGGCTaGGGCTCACCCGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQISWRSG*GSPDPF
Trigger: GAAAGGGTCGGGTGAGCCCCAGCCAGATCTCCAGCT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTACAACGCCTTCACTGTaGTCCGGGATGAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTATTPSL*SGMNFS
Trigger: AGAAAAATTCATCCCGGACCACAGTGAAGGCGTTGT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCGGTGCAAGACCCCTTTaGATAATGATGTTATGCACG +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCGARPL*IMMLCT
Trigger: CGTGCATAACATCATTATTCAAAGGGGTCTTGCACC...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTNWDFI*IWCKTP
Trigger: AGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATT...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGAGCCCAGGGATCTGTaGTGGCCTCAAGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNEPRDL*WPQAVC
Trigger: ACAGACGGCTTGAGGCCATCACAGATCCCTGGGCTC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATACCCACTGTATTGCTTaGAAACGATGCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYTHCIA*KRCSNR
Trigger: CCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTGTTGCATAAAGCCATaGTGCACACCCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCCCIKP*CTPTVL
Trigger: CAATACAGTGGGTGTGCAGCATGGCTTTATGCAACA...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGGCCCCTCCCCAAGCTaGTCACTCACACCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNGPSPS*SLTPLR
Trigger: CCTCAAAGGTGTGAGTGACCAGCTTGGGGAGGGGCC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCTACAGGACTGGAAGTaGAGTTCCCAAACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYLQDWK*SSQTES
Trigger: ACTCTCTGTTTGGGAACTCCACTTCCAGTCCTGTAG...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCATCTGGACCGGCTTTaGCTGGATATTAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYHLDRL*LDINWD
Trigger: GTCCCAATTAATATCCAGCCAAAGCCGGTCCAGATG...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGCGCTGGCGTTCTGTTaGCTTGTGTCAGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIALAFC*LVSAGL
Trigger: GAGACCAGCTGACACAAGCCAACAGAACGCCAGCGC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATCTTGGATGTGGGAATaGGGGAGGTCTGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQSWMWE*GRSGSN
Trigger: GTTTGAACCAGACCTCCCCCATTCCCACATCCAAGA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTAGGCTCTTGGTGAGCTaGAGATCTGGCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIRLLVS*RSGWGS
Trigger: TGAGCCCCAGCCAGATCTCCAGCTCACCAAGAGCCT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACACCTTTCAGTATGATTTaGGAGCCATCGAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTPFSMI*EPSRLF
Trigger: AAATAACCTCGATGGCTCTCAAATCATACTGAAAGG...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACACTGCCTTTCAGTATaGTTTGAGAGCCATCGAGGT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQHCLSV*FESHRG
Trigger: ACCTCGATGGCTCTCAAATCATACTGAAAGGCAGTG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTANWDFI*IWCKTP
Trigger: AGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACACCCGACCCTTTCATaGTGTCTGTGTGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQHPTLS*CLCVKP
Trigger: AGGTTTTACACACAGACATCATGAAAGGGTCGGGTG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATAATCATCACCATCTCTaGAGAGGGGTTGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYNHHHL*RGVDPH
Trigger: ATGAGGATCAACCCCTCTGCAGAGATGGTGATGATT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGGAGCGAGCTGGTTTTaGTGCGATGCTGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNGASWF*CDAGHS
Trigger: GGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAGCTTGTGCAAACTGTTaGCTTGAGCCTATACTGGCA +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQACANC*LEPILA
Trigger: TGCCAGTATAGGCTCAAGCCAACAGTTTGCACAAGC...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCCCACTCACATTAGATaGGGCTTGCTGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNPTHIR*GLLPTA
Trigger: GGCAGTGGGCAGCAAGCCCCATCTAATGTGAGTGGG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAATTTGTGCTGTTAAATaGAACGGTGACAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKICAVK*NGDRLC
Trigger: GCACAGCCTGTCACCGTTCCATTTAACAGCACAAAT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACTGCTCAGAGGCCACTTaGCCAGAGATGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNCSEAT*PEMSWE
Trigger: CTCCCAGCTCATCTCTGGCCAAGTGGCCTCTGAGCA...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAGTGGTTGACTATCACTaGACTTCCAGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQVVDYH*TSRGGK
Trigger: TTTGCCACCTCTGGAAGTCCAGTGATAGTCAACCAC...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCATGGTGGCGAAGCCTaGCCTTCCCTGGGAAACACT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNHGGEA*PSLGNT
Trigger: AGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTCGGGTGTCACAGCATaGGCTTGGTCCCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQISGVTA*AWSLCN
Trigger: GTTACAGAGGGACCAAGCCCATGCTGTGACACCCGA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGTTTTGCTGCGATGCTaGTCACTCCTGTCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIVLLRC*SLLSSG
Trigger: CCCGCTTGACAGGAGTGACCAGCATCGCAGCAAAAC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAACAACGCCTTCACTGTaGTCCGGGATGAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKTTPSL*SGMNFS
Trigger: AGAAAAATTCATCCCGGACCACAGTGAAGGCGTTGT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAGCTGCTTCTAAAATaGAGTCCGTTTCTACAACGC +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKQLLLK*SPFLQR
Trigger: GCGTTGTAGAAACGGACTCCATTTTAGAAGCAGCTG...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR CAA 72 bp GCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTaGAATGGAACAGAATTCAGCGATAATAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: AWLRAEGKGTTR*NGTEFSDNKEH
Trigger: ATGTTCTTTATTATCGCTGAATTCTGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAATCGTGTTCTGTTGGTTaGCAATGTTCACAGACATGT +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKSCSVG*QCSQTC
Trigger: ACATGTCTGTGAACATTGTCAACCAACAGAACACGA...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGAGGAGAGGCGTGGTTaGCTATCACTGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNEERRG*LSLDFQ
Trigger: CTGGAAGTCCAGTGATAGTCAACCACGCCTCTCCTC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACAGCTTCGTCAAGTTTaGAGGAACAACAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQQLRQV*RNNRNR
Trigger: CCGATTTCTGTTGTTCCTTCAAACTTGACGAAGCTG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACACTGTGGTCCGGGATaGATTTTTCTAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQHCGPG*IFLGSF
Trigger: AAAACTGCCTAGAAAAATTCATCCCGGACCACAGTG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATGCATAAAGCCATGCTaGACACCCACTGTATTGCTT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQCIKPC*TPTVLL
Trigger: AAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCATAGTTCAATGCTTGTaGGTCTCCAATAAGATCGAG +
Preference number: 4 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCIVQCL*VSNKIE
Trigger: CTCGATCTTATTGGAGACCCACAAGCATTGAACTAT...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATTGGACCGGCTTTGGCTaGATATTAATTGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYWTGFG*ILIGTL
Trigger: TAAAGTCCCAATTAATATCCAGCCAAAGCCGGTCCA...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATTGGCTTGTGTCAGCTaGTCTCCCGTAAAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQLACVS*SPVKFD
Trigger: ATCAAACTTTACGGGAGACCAGCTGACACAAGCCAA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTAGGCTCTTGGTGAGCTaGAGATCTGGCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLRLLVS*RSGWGS
Trigger: TGAGCCCCAGCCAGATCTCCAGCTCACCAAGAGCCT...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTCATCTTCAAGAAACTaGAGGCTGCTTGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQISSSRN*RLLASG
Trigger: GCCGCTTGCAAGCAGCCTTCAGTTTCTTGAAGATGA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGAAACATTAGAAGCCTaGGTAAAGGATGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKETLEA*VKDADE
Trigger: TTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACTGCAGTGTCTGACCTaGGTAATTAGAAACATTAGA +
Preference number: 4 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKLQCLT*VIRNIR
Trigger: TCTAATGTTTCTAATTACTCAGGTCAGACACTGCAG...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTCCGATTAACTGTATCTaGCCGGAGCCACTAATCTGG +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIPINCI*PEPLIW
Trigger: CCAGATTAGTGGCTCCGGTCAGATACAGTTAATCGG...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTCAACAGAAATCGGCCTaGAAACCCTCAGGATCTACG +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIQQKSA*KPSGST
Trigger: CGTAGATCCTGAGGGTTTTCAGGCCGATTTCTGTTG...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGGCTGCAGAATACCCTaGGTTCGTCACATCATCGCT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNGCRIP*VRHIIA
Trigger: AGCGATGATGTGACGAACGCAGGGTATTCTGCAGCC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTTAGATGGGGCTTGCTaGCCACTGCCTTTCAGTATG +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQILDGAC*PLPFSM
Trigger: CATACTGAAAGGCAGTGGGCAGCAAGCCCCATCTAA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTTTATAGCCTGGACATaGTGCACCGAGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIFIAWT*CTELEL
Trigger: CAGCTCCAACTCGGTGCACCATGTCCAGGCTATAAA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTGTTTTGCTGCGATGCTaGTCACTCCTGTCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLVLLRC*SLLSSG
Trigger: CCCGCTTGACAGGAGTGACCAGCATCGCAGCAAAAC...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGAGATCGGGGAGAGGTaGAGACTCAAGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNEIGER*RLKFIF
Trigger: GAAGATGAACTTGAGTCTTCACCTCTCCCCGATCTC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCCGATTAACTGTATCTaGCCGGAGCCACTAATCTGG +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNPINCI*PEPLIW
Trigger: CCAGATTAGTGGCTCCGGTCAGATACAGTTAATCGG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGTCATCATGGAAGGCTaGTTACCGAAGGACCCGATT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNVIMEG*LPKDPI
Trigger: AATCGGGTCCTTCGGTAATCAGCCTTCCATGATGAC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAACCTTTCAGTATGATTTaGGAGCCATCGAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQPFSMI*EPSRLF
Trigger: AAATAACCTCGATGGCTCTCAAATCATACTGAAAGG...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTCACCCGACCCTTTCATaGTGTCTGTGTGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIHPTLS*CLCVKP
Trigger: AGGTTTTACACACAGACATCATGAAAGGGTCGGGTG...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCTGCTGTTAGGCAAATaGTGGCTGGGAACACTGATC +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNLLLGK*WLGTLI
Trigger: GATCAGTGTTCCCAGCCAGCATTTGCCTAACAGCAG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACACATTAGATGGGGCTTaGTGCCCACTGCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNTLDGA*CPLPFS
Trigger: ACTGAAAGGCAGTGGGCAGCAAGCCCCATCTAATGT...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACTTCCTGCGAAGCCATTaGAGAAAAGCTGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNFLRSH*RKAGEV
Trigger: GACTTCCCCAGCTTTTCTCCAATGGCTTCGCAGGAA...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
3UTR CAA 72 bp AATTTACAAGTTTCATTTTGGTACAGTAGGCTCTCCTaGTGTGGGACTAATGTCATGGTGAGAAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: NLQVSFWYSRLS*CGTNVMVRSPV
Trigger: TACAGGGCTTCTCACCATGACATTAGTCCCACACAAGGAGAGCCTACTGTACCAAAATGAAACTTGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCTACAGGACTGGAAGTaGAGTTCCCAAACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNLQDWK*SSQTES
Trigger: ACTCTCTGTTTGGGAACTCCACTTCCAGTCCTGTAG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTATTTGTGCTGTTAAATaGAACGGTGACAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIICAVK*NGDRLC
Trigger: GCACAGCCTGTCACCGTTCCATTTAACAGCACAAAT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTTGGCTTGTGTCAGCTaGTCTCCCGTAAAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQILACVS*SPVKFD
Trigger: ATCAAACTTTACGGGAGACCAGCTGACACAAGCCAA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCTCTTTCCTCCTGGTTaGACATCCTGTCAATCATCA +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNLFPPG*TSCQSS
Trigger: TGATGATTGACAGGATGTTCAACCAGGAGGAAAGAG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCAGCTTCGTCAAGTTTaGAGGAACAACAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNQLRQV*RNNRNR
Trigger: CCGATTTCTGTTGTTCCTTCAAACTTGACGAAGCTG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR GCA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTGCACACCCACTGTATTaGTTGCAAACGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLAHPLY*LQTMLQ
Trigger: TTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGC...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR GCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACAGAAATGTTTCCCTCTaGAGAGACCACGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNRNVSL*RDHDVV
Trigger: AACCACATCGTGGTCTCTGCAGAGGGAAACATTTCT...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTGGACCGGCTTTGGCTaGATATTAATTGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIWTGFG*ILIGTL
Trigger: TAAAGTCCCAATTAATATCCAGCCAAAGCCGGTCCA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR TCA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTTCTACTGTGGCCTTCTaGCTTTTTAGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQISTVAF*LFRNVS
Trigger: GGAAACATTTCTAAAAAGTCAGAAGGCCACAGTAGA...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CCA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACATAGTTCAATGCTTGTaGGTCTCCAATAAGATCGAG +
Preference number: 4 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNIVQCL*VSNKIE
Trigger: CTCGATCTTATTGGAGACCCACAAGCATTGAACTAT...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp TGGGCAAGCTTTTGCGGTGGCCCTCGGGGCCCGGAGAGCACCTGCTaGCCTTGGCAGGGTCCCTCCGGCCGCCCTTGTCCTCAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: WASFCGGPRGPESTC*PWQGPSGRPCPQAD
Trigger: GTCCGCCTGAGGACAAGGGCGGCCGGAGGGACCCTGCCAAGGTCAGCAGGTGCTCTCCGGGCCCCGAGGGCCACCGCAAAAGCTTGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp CGGCGGGGAACCGAGCGGGTCCTGCCATGCCGCTCACCGCGGGCATaGTGGCGAAGCCTGGCCTTCCCTGGGAAACACTGCTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RRGTERVLPCRSPRA*WRSLAFPGKHCSAQ
Trigger: CTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCGGCATGGCAGGACCCGCTCGGTTCCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp CGGGGAACCGAGCGGGTCCTGCCATGCCGCTCACCGCGGGCATGGTaGCGAAGCCTGGCCTTCCCTGGGAAACACTGCTCTGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RGTERVLPCRSPRAW*RSLAFPGKHCSAQV
Trigger: CACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCGGCATGGCAGGACCCGCTCGGTTCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CAAGTAGCAACAGAACACGCCCTGGTGCAGGCCCGCACAGAGGGAAGGATGAGGGGCCTGGGCAAGCTTTaGCGGTGGCCCTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QVATEHALVQARTEGRMRGLGKL*RWPSGP
Trigger: GGGCCCCGAGGGCCACCGCAAAAGCTTGCCCAGGCC...CCTCATCCTTCCCTCTGTGCGGGCCTGCACCAGGGCGTGTTCTGTTGCTACTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS GCA 90 bp GACAGGGCATCTCCATGTGCGAGCTGGCCAGGACGCCGGGGAGCTTaGTCTCAGAGCCGTGATCTGGCCTGGGCAAGCTTTTGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: DRASPCASWPGRRGA*SQSRDLAWASFCGG
Trigger: GCCACCGCAAAAGCTTGCCCAGGCCAGATCACGGCTCTGAGAGCAAGCTCCCCGGCGTCCTGGCCAGCTCGCACATGGAGATGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GCCATGCCGCTCACCGCGGGCATGGTGGCGAAGCCTGGCCTTCCCTaGGAAACACTGCTCTGCCCAGGTGACAGGTGTAACACGGTGGGT +
Preference number: 5 (lower is better)
Translates to: AMPLTAGMVAKPGLP*ETLLCPGDRCNTVG
Trigger: ACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCGGCATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp TTTGATCCCGGTGCCCCCGACTGCACCGTAGGCCCAAGAGTAGGATaGGCAGTGCTAGCTGAGCTGACGGCGGGGAACCGAGCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: FDPGAPDCTVGPRVG*AVLAELTAGNRAGP
Trigger: AGGACCCGCTCGGTTCCCCGCCGTCAGCTCAGCTAGCACTGCTCATCCTACTCTTGGGCCTACGGTGCAGTCGGGGGCACCGGGATCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp GCGGGCATGGTGGCGAAGCCTGGCCTTCCCTGGGAAACACTGCTCTaGCCAGGTGACAGGTGTAACACGGTGGGTGAGGCCTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: AGMVAKPGLPWETLL*PGDRCNTVGEACCK
Trigger: CTTGCAGCAGGCCTCACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp TCACCGCGGGCATGGTGGCGAAGCCTGGCCTTCCCTGGGAAACACTaGTCTGCCCAGGTGACAGGTGTAACACGGTGGGTGAGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SPRAWWRSLAFPGKH*SAQVTGVTRWVRPA
Trigger: AGCAGGCCTCACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GCTGGGGAAGTCCAGGTCCGCCGCACCGCTGGCCGTAGGGTCGCTTaGCGGCCGCCCCGAGTTCTTGAGTTCCAGGATGTTCTTAAAGGT +
Preference number: 5 (lower is better)
Translates to: AGEVQVRRTAGRRVA*RPPRVLEFQDVLKG
Trigger: ACCTTTAAGAACATCCTGGAACTCAAGAACTCGGGGCGGCCGCCAAGCGACCCTACGGCCAGCGGTGCGGCGGACCTGGACTTCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGTCTGCCATGCCTGGCTaGGCTCGGTCTCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: RWPLRQSASLQQWGLGSESAMPG*ARSLLW
Trigger: CCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGA...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS CCA 90 bp TGGTTGACAATGTTCACAGACATGTGCGGCCCAACCACGGAGCCCTaGGGCGAGCTTGTGGGGGCGAAGGAGATCCCCTGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: WLTMFTDMCGPTTEP*GELVGAKEIPCWAW
Trigger: CCATGCCCAGCAGGGGATCTCCTTCGCCCCCACAAGCTCGCCCCAGGGCTCCGTGGTTGGGCCGCACATGTCTGTGAACATTGTCAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp CTTTGTCCTGGAAGGAGTCGAGACAGGGCATCTCCATGTGCGAGCTaGCCAGGACGCCGGGGAGCTTGCTCTCAGAGCCGTGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: LCPGRSRDRASPCAS*PGRRGACSQSRDLA
Trigger: GGCCAGATCACGGCTCTGAGAGCAAGCTCCCCGGCGTCCTGGCCAGCTCGCACATGGAGATGCCCTGTCTCGACTCCTTCCAGGACAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp AGGCTGCTTGCAAGCGGCAGCCCATCACTGGGCCCCTCCCCAAGCTaGTCACTCACACCTTTGAGGGCCGATTTAGGGTCAGCGTTCGTG +
Preference number: 5 (lower is better)
Translates to: RLLASGSPSLGPSPS*SLTPLRADLGSAFV
Trigger: CACGAACGCTGACCCTAAATCGGCCCTCAAAGGTGTGAGTGACCAGCTTGGGGAGGGGCCCAGTGATGGGCTGCCGCTTGCAAGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS CCA 90 bp TGGCTCGGTCTCTGCTTTGGGCCCTGGGCACCTGATGGAGCGAGCTaGTTTTGCTGCGATGCTGGTCACTCCTGTCAAGCGGGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: WLGLCFGPWAPDGAS*FCCDAGHSCQAGSQ
Trigger: CTGAGACCCCGCTTGACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp ACGGTGGGTGAGGCCTGCTGCAAGGGCATCTGTCCCCCGACGATCTaGGGAGAGGCGTGGTTGACTATCACTGGACTTCCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: TVGEACCKGICPPTI*GEAWLTITGLPEVA
Trigger: TGCCACCTCTGGAAGTCCAGTGATAGTCAACCACGCCTCTCCTCAGATCGTCGGGGGACAGATGCCCTTGCAGCAGGCCTCACCCACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp TGCTGGGGGATTTGGAAGCAGAGACTGGAAGACGGTGGGACACACTaGCGGGCGCTGGCGTTCTGTTGGCTTGTGTCAGCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: CWGIWKQRLEDGGTH*RALAFCWLVSAGLP
Trigger: CGGGAGACCAGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAATCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp GGTCTCTGCTTTGGGCCCTGGGCACCTGATGGAGCGAGCTGGTTTTaGTGCGATGCTGGTCACTCCTGTCAAGCGGGGTCTCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: GLCFGPWAPDGASWF*CDAGHSCQAGSQVQ
Trigger: CTGTACCTGAGACCCCGCTTGACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp TTCCCTGGGAAACACTGCTCTGCCCAGGTGACAGGTGTAACACGGTaGGTGAGGCCTGCTGCAAGGGCATCTGTCCCCCGACGATCTGAG +
Preference number: 5 (lower is better)
Translates to: FPGKHCSAQVTGVTR*VRPAARASVPRRSE
Trigger: CTCAGATCGTCGGGGGACAGATGCCCTTGCAGCAGGCCTCACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp TGGGACACACTGACGGGCGCTGGCGTTCTGTTGGCTTGTGTCAGCTaGTCTCCCGTAAAGTTTGATCCCGGTGCCCCCGACTGCACCGTA +
Preference number: 5 (lower is better)
Translates to: WDTLTGAGVLLACVS*SPVKFDPGAPDCTV
Trigger: TACGGTGCAGTCGGGGGCACCGGGATCAAACTTTACGGGAGACCAGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GCAGGGTCCCTCCGGCCGCCCTTGTCCTCAGGCGGACCCCGGTATTaGCCTAAGACCCCTCTGTCAAATTTCAGTGTTCTACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: AGSLRPPLSSGGPRY*PKTPLSNFSVLLWP
Trigger: AGGCCACAGTAGAACACTGAAATTTGACAGAGGGGTCTTAGGCCAATACCGGGGTCCGCCTGAGGACAAGGGCGGCCGGAGGGACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGGTTTTCTCTAGGCTCTaGGTGAGCTGGAGATCTGGC +
Preference number: 5 (lower is better)
Translates to: RWPLRQSASLQQWGLGSEVFSRL*VSWRSG
Trigger: GCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAAC...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS GCA 90 bp CTCTGCTTTGGGCCCTGGGCACCTGATGGAGCGAGCTGGTTTTGCTaGGATGCTGGTCACTCCTGTCAAGCGGGGTCTCAGGTACAGCTT +
Preference number: 5 (lower is better)
Translates to: LCFGPWAPDGASWFC*DAGHSCQAGSQVQL
Trigger: AAGCTGTACCTGAGACCCCGCTTGACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp GGTCATGATTCGTTGCTTCTGCCATGCCTGGCTTGGCTCGGTCTCTaGTTTGGGCCCTGGGCACCTGATGGAGCGAGCTGGTTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: GHDSLLLPCLAWLGL*FGPWAPDGASWFCC
Trigger: GCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGAATCATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp GCCCATGGGGGAATGGATGACGATGCTGCCCCCTGTGCCGCTCACTaGCTGCGAGGTGACAGGCTTTCTCGTGTTCTGTTGGTTGACAAT +
Preference number: 5 (lower is better)
Translates to: AHGGMDDDAAPCAAH*LRGDRLSRVLLVDN
Trigger: ATTGTCAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCACAGGGGGCAGCATCGTCATCCATTCCCCCATGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GTGCCGCTCACTGCCTGCGAGGTGACAGGCTTTCTCGTGTTCTGTTaGTTGACAATGTTCACAGACATGTGCGGCCCAACCACGGAGCCC +
Preference number: 5 (lower is better)
Translates to: VPLTACEVTGFLVFC*LTMFTDMCGPTTEP
Trigger: GGGCTCCGTGGTTGGGCCGCACATGTCTGTGAACATTGTCAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp TTGCTCAAGGTGCTGGGGGATTTGGAAGCAGAGACTGGAAGACGGTaGGACACACTGACGGGCGCTGGCGTTCTGTTGGCTTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: LLKVLGDLEAETGRR*DTLTGAGVLLACVS
Trigger: GCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAATCCCCCAGCACCTTGAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGTGCACACCCACTGTATaGCTTGCAAACGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: RAPATHHSAGWSGRVFPTCTPTV*LANDAP
Trigger: TGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCA...CGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp GGCGGTGGGCTTCCAGGCAGAGCACCGGCTACCCACCACTCAGCGGGCTGGTCATGGTGCAAGACCCCTTaGAATAATGATGTTATGCAC +
Preference number: 5 (lower is better)
Translates to: GGGLPGRAPATHHSAGWSWCKTP*NNDVMH
Trigger: GTGCATAACATCATTATTCAAAGGGGTCTTGCACCA...TGACCAGCCCGCTGAGTGGTGGGTAGCCGGTGCTCTGCCTGGAAGCCCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS CCA 90 bp CTAGATGAAACTGGTCATGATTCGTTGCTTCTGCCATGCCTGGCTTaGCTCGGTCTCTGCTTTGGGCCCTGGGCACCTGATGGAGCGAGC +
Preference number: 5 (lower is better)
Translates to: LDETGHDSLLLPCLA*LGLCFGPWAPDGAS
Trigger: GCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGAATCATGACCAGTTTCATCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGGCCTGGGCAAGCTTTaGCGGTGGCCCTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKGLGKL*RWPSGP
Trigger: GGGCCCCGAGGGCCACCGCAAAAGCTTGCCCAGGCC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp ATGGGGGAATGGATGACGATGCTGCCCCCTGTGCCGCTCACTGCCTaGGAGGTGACAGGCTTTCTCGTGTTCTGTTGGTTGACAATGTTC +
Preference number: 5 (lower is better)
Translates to: MGEWMTMLPPVPLTA*EVTGFLVFCWLTMF
Trigger: GAACATTGTCAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCACAGGGGGCAGCATCGTCATCCATTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GCCCAGGGATCTGTGATGGCCTCAAGCCGTCTGTGGTCTTGGATGTaGGAATGGGGGAGGTCTGGTTCAAACACTTCTTCTGAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: AQGSVMASSRLWSWM*EWGRSGSNTSSEPD
Trigger: GTCAGGCTCAGAAGAAGTGTTTGAACCAGACCTCCCCCATTCCCACATCCAAGACCACAGACGGCTTGAGGCCATCACAGATCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp CTTCAAATTCATTGTCCACTTGCCTCAGGTCTTCCTCCGTGGGCATaGAGCCCTGGCACACGTGGTAGGAGAGCAGTCTCTGCACCGTGT +
Preference number: 5 (lower is better)
Translates to: LQIHCPLASGLPPWA*SPGTRGRRAVSAPC
Trigger: ACACGGTGCAGAGACTGCTCTCCTACCACGTGTGCCAGGGCTCCATGCCCACGGAGGAAGACCTGAGGCAAGTGGACAATGAATTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp CGACCTCTTCAAATTCATTGTCCACTTGCCTCAGGTCTTCCTCCGTaGGCATGGAGCCCTGGCACACGTGGTAGGAGAGCAGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: RPLQIHCPLASGLPP*AWSPGTRGRRAVSA
Trigger: TGCAGAGACTGCTCTCCTACCACGTGTGCCAGGGCTCCATGCCCACGGAGGAAGACCTGAGGCAAGTGGACAATGAATTTGAAGAGGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGTTGGCCACTGAGGCAGAGCGCTTCCCTTCAGCAGTGGGGGCTCGGGAGTGAGACAGCTTCGTCAAGTTaGAAGGAACAACAGAAATCG +
Preference number: 5 (lower is better)
Translates to: RWPLRQSASLQQWGLGSETASSS*KEQQKS
Trigger: CGATTTCTGTTGTTCCTTCAAACTTGACGAAGCTGT...CTCACTCCCGAGCCCCCACTGCTGAAGGGAAGCGCTCTGCCTCAGTGGCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS CCA 90 bp ACGAGCGCCAGACGCTTGTCCCTCGACAGGGAAGCTCTTTCCTCCTaGTTGAACATCCTGTCAATCATCACCATCTCTGCAGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TSARRLSLDREALSS*LNILSIITISAEGL
Trigger: CAACCCCTCTGCAGAGATGGTGATGATTGACAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCGAGGGACAAGCGTCTGGCGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAAGCCCTGGGGCGAGCTaGTGGGGGCGAAGGAGATCC +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKSPGAS*WGRRRS
Trigger: GGATCTCCTTCGCCCCCACAAGCTCGCCCCAGGGCT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACATCTGCCATGCCTGGCTaGGCTCGGTCTCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTSAMPG*ARSLLW
Trigger: CCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGA...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp TGCTGGCTGGGAACACTGATCCCCACGTGTTGCATAAAGCCATGCTaGACACCCACTGTATTGCTTGCAAACGATGCTCCAACAGGCACG +
Preference number: 5 (lower is better)
Translates to: CWLGTLIPTCCIKPC*TPTVLLANDAPTGT
Trigger: CGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GTGTGTAAAACCTCATTCTTTGGGGAATTCCTCAGCGCTTTGTCCTaGAAGGAGTCGAGACAGGGCATCTCCATGTGCGAGCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VCKTSFFGEFLSALS*KESRQGISMCELAR
Trigger: CCTGGCCAGCTCGCACATGGAGATGCCCTGTCTCGACTCCTTCCAGGACAAAGCGCTGAGGAATTCCCCAAAGAATGAGGTTTTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGACTGATCCCCACGTGTaGCATAAAGCCATGCTGCAC +
Preference number: 5 (lower is better)
Translates to: EEALTGIKATSGSQRLMETDPHV*HKAMLH
Trigger: GTGCAGCATGGCTTTATGCAACACGTGGGGATCAGT...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS GCA 90 bp TTGCATAAAGCCATGCTGCACACCCACTGTATTGCTTGCAAACGATaGTCCAACAGGCACGTGAGTCACCCCGATAGGCTGCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LHKAMLHTHCIACKR*SNRHVSHPDRLQCL
Trigger: CAGACACTGCAGCCTATCGGGGTGACTCACGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp GAGGCGTGGTTGACTATCACTGGACTTCCAGAGGTGGCAAAAGTCTaGCCAGACACCAGCTGGACGGCGGTATTCTGGTTATTAAGCATC +
Preference number: 5 (lower is better)
Translates to: EAWLTITGLPEVAKV*PDTSWTAVFWLLSI
Trigger: GATGCTTAATAACCAGAATACCGCCGTCCAGCTGGTGTCTGGGCAGACTTTTGCCACCTCTGGAAGTCCAGTGATAGTCAACCACGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GAGGTGGCAAAAGTCTGCCCAGACACCAGCTGGACGGCGGTATTCTaGTTATTAAGCATCTGTCCGGAATATGGTTGGTTGGTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: EVAKVCPDTSWTAVF*LLSICPEYGWLVLS
Trigger: GCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACCGCCGTCCAGCTGGTGTCTGGGCAGACTTTTGCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GGCTACCCACCACTCAGCGGGCTGGTCAGGGAGAGTCTTCCCTACGCAGATACCAAAATTGAATTAGAATaGGCTGCAGAATACCCTGCG +
Preference number: 5 (lower is better)
Translates to: GYPPLSGLVRESLPYADTKIELE*AAEYPA
Trigger: CGCAGGGTATTCTGCAGCCAATTCTAATTCAATTTT...GGTATCTGCGTAGGGAAGACTCTCCCTGACCAGCCCGCTGAGTGGTGGGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGTGCAAACTGTTGGCTaGAGCCTATACTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: REEALTGIKATSGSQRLMVQTVG*SLYWHP
Trigger: TGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCAC...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp AGGGAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGCCTTTAGTCAGCTGTTaGGCAGCAGGCCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: REEALTGIKATSGSQRLMPLVSC*AAGLFC
Trigger: ACAGAAAAGGCCTGCTGCCAAACAGCTGACTAAAGG...CATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS GCA 90 bp AAATGCTGGCTGGGAACACTGATCCCCACGTGTTGCATAAAGCCATaGTGCACACCCACTGTATTGCTTGCAAACGATGCTCCAACAGGC +
Preference number: 5 (lower is better)
Translates to: KCWLGTLIPTCCIKP*CTPTVLLANDAPTG
Trigger: GCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAACTGATCCCCACGTGTaGCATAAAGCCATGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTTDPHV*HKAMLH
Trigger: GTGCAGCATGGCTTTATGCAACACGTGGGGATCAGT...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CAGGGCGTACACCTGGGGCTAAGAACAGACCATTCTCAGACAGAATTCAGCACGTTCCCAAACAGAGAGTaGCCGTTAGGAGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: QGVHLGLRTDHSQTEFSTFPNRE*PLGVCL
Trigger: CAGACAGACTCCTAACGGCAACTCTCTGTTTGGGAA...CGTGCTGAATTCTGTCTGAGAATGGTCTGTTCTTAGCCCCAGGTGTACGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTACATGGTGCACCGAGTaGGAGCTGACAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTTWCTE*ELTERL
Trigger: AAGCCTTTCTGTCAGCTCCAACTCGGTGCACCATGT...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS TCA 90 bp TGGTGCTGCTGGATCCCAAGGTTGTTCACATTGTACGCGCTCTGCTaGCCCATCTGGACCGGCTTTGGCTGGATATTAATTGGGACTTTA +
Preference number: 5 (lower is better)
Translates to: WCCWIPRLFTLYALC*PIWTGFGWILIGTL
Trigger: TAAAGTCCCAATTAATATCCAGCCAAAGCCGGTCCAGATGGGTCAGCAGAGCGCGTACAATGTGAACAACCTTGGGATCCAGCAGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp GGTCACTCCTGTCAAGCGGGGTCTCAGGTACAGCTTCGTCAAGTTTaGAGGAACAACAGAAATCGGCCTGAAAACCCTCAGGATCTACGA +
Preference number: 5 (lower is better)
Translates to: GHSCQAGSQVQLRQV*RNNRNRPENPQDLR
Trigger: TCGTAGATCCTGAGGGTTTTCAGGCCGATTTCTGTTGTTCCTTCAAACTTGACGAAGCTGTACCTGAGACCCCGCTTGACAGGAGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 90 bp CTGCTGTTAGGCAAATGCTGGCTGGGAACACTGATCCCCACGTGTTaGATAAAGCCATGCTGCACACCCACTGTATTGCTTGCAAACGAT +
Preference number: 5 (lower is better)
Translates to: LLLGKCWLGTLIPTC*IKPCCTPTVLLAND
Trigger: ATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCCTAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp GTGTCATTTAGTGACCGGAACTGGCTTTTGTCGGGTGTCACAGCATaGGCTTGGTCCCTCTGTAACTGCTGGAGGATGAAAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: VSFSDRNWLLSGVTA*AWSLCNCWRMKAPL
Trigger: TAAAGGAGCTTTCATCCTCCAGCAGTTACAGAGGGACCAAGCCCATGCTGTGACACCCGACAAAAGCCAGTTCCGGTCACTAAATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp AGTTCCAGGATGTTCTTAAAGGTTTTCTCTAGGCTCTTGGTGAGCTaGAGATCTGGCTGGGGCTCACCCGACCCTTTCATGATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SSRMFLKVFSRLLVS*RSGWGSPDPFMMSV
Trigger: CACAGACATCATGAAAGGGTCGGGTGAGCCCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACATGCACACCCACTGTATaGCTTGCAAACGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTCTPTV*LANDAP
Trigger: TGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCA...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTACATGGTGCACCGAGTaGGAGCTGACAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTATWCTE*ELTERL
Trigger: AAGCCTTTCTGTCAGCTCCAACTCGGTGCACCATGT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGACTGGTCATGATTCGTaGCTTCTGCCATGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKTGHDS*LLPCLA
Trigger: AGCCAGGCATGGCAGAAGCAACGAATCATGACCAGT...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp TTTGATGCTTGGCTAAGGGCTGAGGGAAAGGGGACAACGAGGTTGAATGGAACAGAATTCCTCAGCGCTTaGTCCTGGAAGGAGTCGAGA +
Preference number: 5 (lower is better)
Translates to: FDAWLRAEGKGTTRLNGTEFLSA*SWKESR
Trigger: TCTCGACTCCTTCCAGGACAAAGCGCTGAGGAATTC...TGTTCCATTCAACCTCGTTGTCCCCTTTCCCTCAGCCCTTAGCCAAGCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACAGCCCTGGGGCGAGCTaGTGGGGGCGAAGGAGATCC +
Preference number: 5 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNSPGAS*WGRRRS
Trigger: GGATCTCCTTCGCCCCCACAAGCTCGCCCCAGGGCT...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTCCGGAATATGGTTGGTaGGTCCTGAGCATGTTAGAG +
Preference number: 5 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAPEYGW*VLSMLE
Trigger: CTCTAACATGCTCAGGACCAACCAACCATATTCCGG...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTCTGTCCGGAATATGGTaGGTTGGTCCTGAGCATGTT +
Preference number: 5 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTALSGIW*VGPEHV
Trigger: AACATGCTCAGGACCAACCAACCATATTCCGGACAG...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAGCTCTTTCCTCCTGGTaGAACATCCTGTCAATCATC +
Preference number: 5 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTALSSW*NILSII
Trigger: GATGATTGACAGGATGTTCAACCAGGAGGAAAGAGC...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCGTTTTCTCTAGGCTCTaGGTGAGCTGGAGATCTGGC +
Preference number: 5 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCVFSRL*VSWRSG
Trigger: GCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAAC...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp TCTGCCAATGTCTGTTCAGTGATATTAGCCTCCTGCAAGGATTTCTaGAGAATGTCAAAGGGTTGGTCCTCGCTGAGATCGGGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: SANVCSVILASCKDF*RMSKGWSSLRSGRG
Trigger: ACCTCTCCCCGATCTCAGCGAGGACCAACCCTTTGACATTCTTCAGAAATCCTTGCAGGAGGCTAATATCACTGAACAGACATTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS GCA 90 bp AGATGCCTGGAAATTTGTGCTGTTAAATGGAACGGTGACAGGCTGTaGTACAGGACTGGAAGTGGAGTTCCCAAACAGAGAGTTGCCGTT +
Preference number: 5 (lower is better)
Translates to: RCLEICAVKWNGDRL*YRTGSGVPKQRVAV
Trigger: AACGGCAACTCTCTGTTTGGGAACTCCACTTCCAGTCCTGTAGCACAGCCTGTCACCGTTCCATTTAACAGCACAAATTTCCAGGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCCACCCACTGTATTGCTaGCAAACGATGCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCHPLYC*QTMLQQ
Trigger: CTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTG...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GAGGAAGCCCTCACAGGCATCAAAGCTACCTCTGGATCCCAGAGGTTGATGGAGGGACTTTATTTGAATTaGGTGCAAGACCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: EEALTGIKATSGSQRLMEGLYLN*VQDPFE
Trigger: TTCAAAGGGGTCTTGCACCAAATTCAAATAAAGTCC...CTCCATCAACCTCTGGGATCCAGAGGTAGCTTTGATGCCTGTGAGGGCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATTATAAGGAACTGACTTaGGGGAGTGTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYYKELT*GSVRLA
Trigger: GGCCAGCCTCACACTCCCCAAAGTCAGTTCCTTATA...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAATATAAGGAACTGACTTaGGGGAGTGTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKYKELT*GSVRLA
Trigger: GGCCAGCCTCACACTCCCCAAAGTCAGTTCCTTATA...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATAAGGTGCTGGGGGATTaGGAAGCAGAGACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYKVLGD*EAETGR
Trigger: TCTTCCAGTCTCTGCTTCCAAATCCCCCAGCACCTT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGGTCGCTGGCATAATTTaGCTTCCAGAATCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKVAGII*LPESCP
Trigger: AGGACAGGATTCTGGAAGCAAAATTATGCCAGCGAC...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATACTGGTCATGATTCGTaGCTTCTGCCATGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYTGHDS*LLPCLA
Trigger: AGCCAGGCATGGCAGAAGCAACGAATCATGACCAGT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp TTTGAGGGCCGATTTAGGGTCAGCGTTCGTGGAGTTGGCGAAAATTaGATTAGAATTGGCTGCAGAATACCCTGCGTTCGTCACATCATC +
Preference number: 5 (lower is better)
Translates to: FEGRFRVSVRGVGEN*IRIGCRIPCVRHII
Trigger: GATGATGTGACGAACGCAGGGTATTCTGCAGCCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCTAAATCGGCCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS TCA 90 bp CCTCCTGCAAGGATTTCTGAAGAATGTCAAAGGGTTGGTCCTCGCTaGGATCGGGGAGAGGTGAAGACTCAAGTTCATCTTCAAGAAACT +
Preference number: 5 (lower is better)
Translates to: PPARISEECQRVGPR*DRGEVKTQVHLQET
Trigger: AGTTTCTTGAAGATGAACTTGAGTCTTCACCTCTCCCCGATCTCAGCGAGGACCAACCCTTTGACATTCTTCAGAAATCCTTGCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS CCA 90 bp CAGCTGGACGGCGGTATTCTGGTTATTAAGCATCTGTCCGGAATATaGTTGGTTGGTCCTGAGCATGTTAGAGGAATTCCTGTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: QLDGGILVIKHLSGI*LVGPEHVRGIPVQH
Trigger: ATGCTGAACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACCGCCGTCCAGCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCACCCACTGTATTGCTaGCAAACGATGCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYHPLYC*QTMLQQ
Trigger: CTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTG...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCTGTCCGGAATATGGTaGGTTGGTCCTGAGCATGTT +
Preference number: 5 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYLSGIW*VGPEHV
Trigger: AACATGCTCAGGACCAACCAACCATATTCCGGACAG...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGGCGCTGGCGTTCTGTaGGCTTGTGTCAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIGAGVL*ACVSWS
Trigger: AGACCAGCTGACACAAGCCAACAGAACGCCAGCGCC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACCTTTAGTCAGCTGTTaGGCAGCAGGCCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKPLVSC*AAGLFC
Trigger: ACAGAAAAGGCCTGCTGCCAAACAGCTGACTAAAGG...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCGCACAGAGGGAAGGATGAGGGCCACTCCCGGAAAGGAACAAAAATAATAAAGAGCAGGAATCTGTATTaGTTCAGCATAGCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: PHRGKDEGHSRKGTKIIKSRNLY*FSIAWV
Trigger: GACCCAAGCTATGCTGAACAAATACAGATTCCTGCT...CTTTATTATTTTTGTTCCTTTCCGGGAGTGGCCCTCATCCTTCCCTCTGTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCGCTCTTTCCTCCTGGTaGAACATCCTGTCAATCATC +
Preference number: 5 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCALSSW*NILSII
Trigger: GATGATTGACAGGATGTTCAACCAGGAGGAAAGAGC...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAACAGCTTCGTCAAGTTaGAAGGAACAACAGAAATCG +
Preference number: 5 (lower is better)
Translates to: PRAKCTVVLSDSAKKQTTTASSS*KEQQKS
Trigger: CGATTTCTGTTGTTCCTTCAAACTTGACGAAGCTGT...TGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp AGGAATCTGTATTTGTTCAGCATAGCTTGGGTCCTTTTGAGGAGCTaGGTGGCGACCTCTTCAAATTCATTGTCCACTTGCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RNLYLFSIAWVLLRS*VATSSNSLSTCLRS
Trigger: AGACCTGAGGCAAGTGGACAATGAATTTGAAGAGGTCGCCACTCAGCTCCTCAAAAGGACCCAAGCTATGCTGAACAAATACAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp TGGACGGCGGTATTCTGGTTATTAAGCATCTGTCCGGAATATGGTTaGTTGGTCCTGAGCATGTTAGAGGAATTCCTGTTCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: WTAVFWLLSICPEYG*LVLSMLEEFLFSMT
Trigger: TGTCATGCTGAACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACCGCCGTCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 90 bp CGGTATTGGCCTAAGACCCCTCTGTCAAATTTCAGTGTTCTACTGTaGCCTTCTGACTTTTTAGAAATGTTTCCCTCTGCAGAGACCACG +
Preference number: 5 (lower is better)
Translates to: RYWPKTPLSNFSVLL*PSDFLEMFPSAETT
Trigger: CGTGGTCTCTGCAGAGGGAAACATTTCTAAAAAGTCAGAAGGCCACAGTAGAACACTGAAATTTGACAGAGGGGTCTTAGGCCAATACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTATGCTCAGAGGCCACTaGGCCAGAGATGAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIMLRGH*ARDELG
Trigger: TCCCAGCTCATCTCTGGCCAAGTGGCCTCTGAGCAT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAGTCGCTGGCATAATTTaGCTTCCAGAATCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKVAGII*LPESCP
Trigger: AGGACAGGATTCTGGAAGCAAAATTATGCCAGCGAC...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GATTGTCAAAATTTTACCCAGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCAGCAGGAATCTGTATTaGTTCAGCATAGCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: DCQNFTQGQVYCGLERQCSRNLY*FSIAWV
Trigger: GACCCAAGCTATGCTGAACAAATACAGATTCCTGCT...GCACTGTCGCTCAAGACCACAGTACACTTGGCCCTGGGTAAAATTTTGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAATTTCCTGCGAAGCCATaGGAGAAAAGCTGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: AKCTVVLSDSAKKQTTKQFPAKP*EKSWGS
Trigger: ACTTCCCCAGCTTTTCTCCAATGGCTTCGCAGGAAA...TTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp GTGTTTGAGGCAGGGGTGTGTTATATAGCCCAAGCTGGCCTTGAACCAGTGACTAAAATAGTTCAATGCTaGTGGGTCTCCAATAAGATC +
Preference number: 5 (lower is better)
Translates to: VFEAGVCYIAQAGLEPVTKIVQC*WVSNKI
Trigger: GATCTTATTGGAGACCCACAAGCATTGAACTATTTT...AGTCACTGGTTCAAGGCCAGCTTGGGCTATATAACACACCCCTGCCTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTGGCGCTGGCGTTCTGTaGGCTTGTGTCAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLGAGVL*ACVSWS
Trigger: AGACCAGCTGACACAAGCCAACAGAACGCCAGCGCC...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAAACCTCTTCAAATTCATaGTCCACTTGCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKTSSNS*STCLRS
Trigger: AGACCTGAGGCAAGTGGACAATGAATTTGAAGAGGT...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp ATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATCGGACTGCTAAAATAGTTCAATGCTaGTGGGTCTCCAATAAGATC +
Preference number: 5 (lower is better)
Translates to: MAVSTFVTLEMWRAYRTAKIVQC*WVSNKI
Trigger: GATCTTATTGGAGACCCACAAGCATTGAACTATTTT...AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AGGGCCAAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAATGGTGCAAGACCCCTTaGAATAATGATGTTATGCAC +
Preference number: 5 (lower is better)
Translates to: RAKCTVVLSDSAKKQTTKWCKTP*NNDVMH
Trigger: GTGCATAACATCATTATTCAAAGGGGTCTTGCACCA...TTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTTGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTAAGGTGCTGGGGGATTaGGAAGCAGAGACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIKVLGD*EAETGR
Trigger: TCTTCCAGTCTCTGCTTCCAAATCCCCCAGCACCTT...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGAATTCCTCAGCGCTTaGTCCTGGAAGGAGTCGAGA +
Preference number: 5 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIEFLSA*SWKESR
Trigger: TCTCGACTCCTTCCAGGACAAAGCGCTGAGGAATTC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp ACCCATCTGGACCGGCTTTGGCTGGATATTAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCTTTGAATAATGATGTTATGCACGGG +
Preference number: 5 (lower is better)
Translates to: THLDRLWLDINWDFI*IWCKTPLNNDVMHG
Trigger: CCCGTGCATAACATCATTATTCAAAGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATTAATATCCAGCCAAAGCCGGTCCAGATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp CGAACAACAATGGCCGTAAGCACTTTCGTAACACTTGAAATGTGGAGGGCCTATAAAATTGAATTAGAATaGGCTGCAGAATACCCTGCG +
Preference number: 5 (lower is better)
Translates to: RTTMAVSTFVTLEMWRAYKIELE*AAEYPA
Trigger: CGCAGGGTATTCTGCAGCCAATTCTAATTCAATTTT...ATAGGCCCTCCACATTTCAAGTGTTACGAAAGTGCTTACGGCCATTGTTGTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AAGTGTACTGTGGTCTTGAGCGACAGTGCTAAGAAACAAACCACAAAACAAATTGTGCAAACTGTTGGCTaGAGCCTATACTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: KCTVVLSDSAKKQTTKQIVQTVG*SLYWHP
Trigger: TGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCAC...AATTTGTTTTGTGGTTTGTTTCTTAGCACTGTCGCTCAAGACCACAGTACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACTTCCCAAACAGAGAGTaGCCGTTAGGAGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNFPNRE*PLGVCL
Trigger: CAGACAGACTCCTAACGGCAACTCTCTGTTTGGGAA...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACCCGGAATATGGTTGGTaGGTCCTGAGCATGTTAGAG +
Preference number: 5 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNPEYGW*VLSMLE
Trigger: CTCTAACATGCTCAGGACCAACCAACCATATTCCGG...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTTTTCCTGCGAAGCCATaGGAGAAAAGCTGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLFPAKP*EKSWGS
Trigger: ACTTCCCCAGCTTTTCTCCAATGGCTTCGCAGGAAA...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGTAAAACCTCATTCTTaGGGGAATTCCTCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNVKPHS*GNSSAL
Trigger: AAGCGCTGAGGAATTCCCCAAAGAATGAGGTTTTAC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS-3UTR CAA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTACCTCTTCAAATTCATaGTCCACTTGCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLTSSNS*STCLRS
Trigger: AGACCTGAGGCAAGTGGACAATGAATTTGAAGAGGT...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTGTAAAACCTCATTCTTaGGGGAATTCCTCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLVKPHS*GNSSAL
Trigger: AAGCGCTGAGGAATTCCCCAAAGAATGAGGTTTTAC...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp TACTTTGGAGCTGCAGTGAGAAAGTCTTTAAATCAGTCCTGTTTGATTTTTCTTTCAGCGTTCGTGGAGTaGGCGAAAATTGAATTAGAA +
Preference number: 5 (lower is better)
Translates to: YFGAAVRKSLNQSCLIFLSAFVE*AKIELE
Trigger: TTCTAATTCAATTTTCGCCAACTCCACGAACGCTGA...AAGAAAAATCAAACAGGACTGATTTAAAGACTTTCTCACTGCAGCTCCAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040624.7
CDS-3UTR CAA 90 bp AACAAACCACAAAACAAATTAACGAACAACAATGGCCGTAAGCACTTTCGTAACGGACTTTATTTGAATTaGGTGCAAGACCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: NKPQNKLTNNNGRKHFRNGLYLN*VQDPFE
Trigger: TTCAAAGGGGTCTTGCACCAAATTCAAATAAAGTCC...GTTACGAAAGTGCTTACGGCCATTGTTGTTCGTTAATTTGTTTTGTGGTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 90 bp TGGATATTAATTGGGACTTTATTTGAATTTGGTGCAAGACCCCTTTaGATAATGATGTTATGCACGGGTAAAGATGCCTGGAAATTTGTG +
Preference number: 5 (lower is better)
Translates to: WILIGTLFEFGARPL*IMMLCTGKDAWKFV
Trigger: CACAAATTTCCAGGCATCTTTACCCGTGCATAACATCATTATTCAAAGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATTAATATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp ACCGAGCGGGTCCTGCCATGCCGCTCACCGCGGGCATaGTGGCGAAGCCTGGCCTTCCCTGGGAAACACTGC +
Preference number: 6 (lower is better)
Translates to: TERVLPCRSPRA*WRSLAFPGKHC
Trigger: GCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCGGCATGGCAGGACCCGCTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp CCCGGAGAGCACCTGCTGACCTTGGCAGGGTCCCTCCGGCCGCCCTaGTCCTCAGGCGGACCCCGGTATTGGCCTAAGACCCCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: PGEHLLTLAGSLRPP*SSGGPRYWPKTPLS
Trigger: TGACAGAGGGGTCTTAGGCCAATACCGGGGTCCGCCTGAGGACAAGGGCGGCCGGAGGGACCCTGCCAAGGTCAGCAGGTGCTCTCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GAGCGGGTCCTGCCATGCCGCTCACCGCGGGCATGGTaGCGAAGCCTGGCCTTCCCTGGGAAACACTGCTCT +
Preference number: 6 (lower is better)
Translates to: ERVLPCRSPRAW*RSLAFPGKHCS
Trigger: AGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAGCGGCATGGCAGGACCCGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp CACCTGCTGACCTTGGCAGGGTCCCTCCGGCCGCCCTaGTCCTCAGGCGGACCCCGGTATTGGCCTAAGACC +
Preference number: 6 (lower is better)
Translates to: HLLTLAGSLRPP*SSGGPRYWPKT
Trigger: GGTCTTAGGCCAATACCGGGGTCCGCCTGAGGACAAGGGCGGCCGGAGGGACCCTGCCAAGGTCAGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp GGTGCCCCCGACTGCACCGTAGGCCCAAGAGTAGGATaGGCAGTGCTAGCTGAGCTGACGGCGGGGAACCGA +
Preference number: 6 (lower is better)
Translates to: GAPDCTVGPRVG*AVLAELTAGNR
Trigger: TCGGTTCCCCGCCGTCAGCTCAGCTAGCACTGCTCATCCTACTCTTGGGCCTACGGTGCAGTCGGGGGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GGAAGGAGTCGAGACAGGGCATCTCCATGTGCGAGCTaGCCAGGACGCCGGGGAGCTTGCTCTCAGAGCCGT +
Preference number: 6 (lower is better)
Translates to: GRSRDRASPCAS*PGRRGACSQSR
Trigger: ACGGCTCTGAGAGCAAGCTCCCCGGCGTCCTGGCCAGCTCGCACATGGAGATGCCCTGTCTCGACTCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GTGGCGAAGCCTGGCCTTCCCTGGGAAACACTGCTCTaGCCAGGTGACAGGTGTAACACGGTGGGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: VAKPGLPWETLL*PGDRCNTVGEA
Trigger: GGCCTCACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp TCGTTGCTTCTGCCATGCCTGGCTTGGCTCGGTCTCTaGTTTGGGCCCTGGGCACCTGATGGAGCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLLLPCLAWLGL*FGPWAPDGASW
Trigger: CCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CTCACCGCGGGCATGGTGGCGAAGCCTGGCCTTCCCTaGGAAACACTGCTCTGCCCAGGTGACAGGTGTAAC +
Preference number: 6 (lower is better)
Translates to: LTAGMVAKPGLP*ETLLCPGDRCN
Trigger: GTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGCCCGCGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp GGCTTGGCTCGGTCTCTGCTTTGGGCCCTGGGCACCTaGTGGAGCGAGCTGGTTTTGCTGCGATGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: GLARSLLWALGT*WSELVLLRCWS
Trigger: TGACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GCATGGTGGCGAAGCCTGGCCTTCCCTGGGAAACACTaGTCTGCCCAGGTGACAGGTGTAACACGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AWWRSLAFPGKH*SAQVTGVTRWV
Trigger: CACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTTCCCAGGGAAGGCCAGGCTTCGCCACCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp TTGTCCTGGAAGGAGTCGAGACAGGGCATCTCCATGTaGGAGCTGGCCAGGACGCCGGGGAGCTTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: LSWKESRQGISM*ELARTPGSLLS
Trigger: TGAGAGCAAGCTCCCCGGCGTCCTGGCCAGCTCGCACATGGAGATGCCCTGTCTCGACTCCTTCCAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CTGACGGGCGCTGGCGTTCTGTTGGCTTGTGTCAGCTaGTCTCCCGTAAAGTTTGATCCCGGTGCCCCCGAC +
Preference number: 6 (lower is better)
Translates to: LTGAGVLLACVS*SPVKFDPGAPD
Trigger: GTCGGGGGCACCGGGATCAAACTTTACGGGAGACCAGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp TCCTGGCAGTGCGGTGCTCAAGAGCCCAGGGATCTGTaGTGGCCTCAAGCCGTCTGTGGTCTTGGATGTGGG +
Preference number: 6 (lower is better)
Translates to: SWQCGAQEPRDL*WPQAVCGLGCG
Trigger: CCCACATCCAAGACCACAGACGGCTTGAGGCCATCACAGATCCCTGGGCTCTTGAGCACCGCACTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp TTTGGGCCCTGGGCACCTGATGGAGCGAGCTGGTTTTaGTGCGATGCTGGTCACTCCTGTCAAGCGGGGTCT +
Preference number: 6 (lower is better)
Translates to: FGPWAPDGASWF*CDAGHSCQAGS
Trigger: AGACCCCGCTTGACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AAACACTGCTCTGCCCAGGTGACAGGTGTAACACGGTaGGTGAGGCCTGCTGCAAGGGCATCTGTCCCCCGA +
Preference number: 6 (lower is better)
Translates to: KHCSAQVTGVTR*VRPAARASVPR
Trigger: TCGGGGGACAGATGCCCTTGCAGCAGGCCTCACCCACCGTGTTACACCTGTCACCTGGGCAGAGCAGTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AGAGACTGGAAGACGGTGGGACACACTGACGGGCGCTaGCGTTCTGTTGGCTTGTGTCAGCTGGTCTCCCGT +
Preference number: 6 (lower is better)
Translates to: RDWKTVGHTDGR*RSVGLCQLVSR
Trigger: ACGGGAGACCAGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GTGCTGGGGGATTTGGAAGCAGAGACTGGAAGACGGTaGGACACACTGACGGGCGCTGGCGTTCTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: VLGDLEAETGRR*DTLTGAGVLLA
Trigger: AGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAATCCCCCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GTTGCTCAAGGTGCTGGGGGATTTGGAAGCAGAGACTaGAAGACGGTGGGACACACTGACGGGCGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: VAQGAGGFGSRD*KTVGHTDGRWR
Trigger: ACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAATCCCCCAGCACCTTGAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CTCTGCTTTGGGCCCTGGGCACCTGATGGAGCGAGCTaGTTTTGCTGCGATGCTGGTCACTCCTGTCAAGCG +
Preference number: 6 (lower is better)
Translates to: LCFGPWAPDGAS*FCCDAGHSCQA
Trigger: CGCTTGACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp GAGACTGGAAGACGGTGGGACACACTGACGGGCGCTGGCGTTCTGTaGGCTTGTGTCAGCTGGTCTCCCGTAAAGTTTGATCCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: ETGRRWDTLTGAGVL*ACVSWSPVKFDPGA
Trigger: GGCACCGGGATCAAACTTTACGGGAGACCAGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp GCCGCACCGCTGGCCGTAGGGTCGCTTGGCGGCCGCCCCGAGTTCTaGAGTTCCAGGATGTTCTTAAAGGTTTTCTCTAGGCTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: AAPLAVGSLGGRPEF*SSRMFLKVFSRLLV
Trigger: CACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACTCAAGAACTCGGGGCGGCCGCCAAGCGACCCTACGGCCAGCGGTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp GAGGCCTGCTGCAAGGGCATCTGTCCCCCGACGATCTaGGGAGAGGCGTGGTTGACTATCACTGGACTTCCA +
Preference number: 6 (lower is better)
Translates to: EACCKGICPPTI*GEAWLTITGLP
Trigger: TGGAAGTCCAGTGATAGTCAACCACGCCTCTCCTCAGATCGTCGGGGGACAGATGCCCTTGCAGCAGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp CTTGTGGGGGCGAAGGAGATCCCCTGCTGGGCATGGTaGTGCTGGATCCCAAGGTTGTTCACATTGTACGCG +
Preference number: 6 (lower is better)
Translates to: LVGAKEIPCWAW*CWIPRLFTLYA
Trigger: CGCGTACAATGTGAACAACCTTGGGATCCAGCAGCACCATGCCCAGCAGGGGATCTCCTTCGCCCCCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp TGGATGACGATGCTGCCCCCTGTGCCGCTCACTGCCTaGGAGGTGACAGGCTTTCTCGTGTTCTGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: WMTMLPPVPLTA*EVTGFLVFCWL
Trigger: CAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCACAGGGGGCAGCATCGTCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GGAATGGATGACGATGCTGCCCCCTGTGCCGCTCACTaGCTGCGAGGTGACAGGCTTTCTCGTGTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: GMDDDAAPCAAH*LRGDRLSRVLL
Trigger: CAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCACAGGGGGCAGCATCGTCATCCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CATTGTCCACTTGCCTCAGGTCTTCCTCCGTGGGCATaGAGCCCTGGCACACGTGGTAGGAGAGCAGTCTCT +
Preference number: 6 (lower is better)
Translates to: HCPLASGLPPWA*SPGTRGRRAVS
Trigger: AGAGACTGCTCTCCTACCACGTGTGCCAGGGCTCCATGCCCACGGAGGAAGACCTGAGGCAAGTGGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp CCGCTCACTGCCTGCGAGGTGACAGGCTTTCTCGTGTTCTGTTGGTaGACAATGTTCACAGACATGTGCGGCCCAACCACGGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: PLTACEVTGFLVFCW*TMFTDMCGPTTEPW
Trigger: CCAGGGCTCCGTGGTTGGGCCGCACATGTCTGTGAACATTGTCAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp ATGATTCGTTGCTTCTGCCATGCCTGGCTTGGCTCGGTCTCTGCTTaGGGCCCTGGGCACCTGATGGAGCGAGCTGGTTTTGCTGCGATG +
Preference number: 6 (lower is better)
Translates to: MIRCFCHAWLGSVSA*GPGHLMERAGFAAM
Trigger: CATCGCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGAATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp TGTGCCGCTCACTGCCTGCGAGGTGACAGGCTTTCTCGTGTTCTGTaGGTTGACAATGTTCACAGACATGTGCGGCCCAACCACGGAGCC +
Preference number: 6 (lower is better)
Translates to: CAAHCLRGDRLSRVL*VDNVHRHVRPNHGA
Trigger: GGCTCCGTGGTTGGGCCGCACATGTCTGTGAACATTGTCAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGTGAGCGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GAGCTTGTGGGGGCGAAGGAGATCCCCTGCTGGGCATaGTGCTGCTGGATCCCAAGGTTGTTCACATTGTAC +
Preference number: 6 (lower is better)
Translates to: ELVGAKEIPCWA*CCWIPRLFTLY
Trigger: GTACAATGTGAACAACCTTGGGATCCAGCAGCACCATGCCCAGCAGGGGATCTCCTTCGCCCCCACAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp ACTGGTCATGATTCGTTGCTTCTGCCATGCCTGGCTTaGCTCGGTCTCTGCTTTGGGCCCTGGGCACCTGAT +
Preference number: 6 (lower is better)
Translates to: TGHDSLLLPCLA*LGLCFGPWAPD
Trigger: ATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGAATCATGACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CTCCGGCCGCCCTTGTCCTCAGGCGGACCCCGGTATTaGCCTAAGACCCCTCTGTCAAATTTCAGTGTTCTA +
Preference number: 6 (lower is better)
Translates to: LRPPLSSGGPRY*PKTPLSNFSVL
Trigger: TAGAACACTGAAATTTGACAGAGGGGTCTTAGGCCAATACCGGGGTCCGCCTGAGGACAAGGGCGGCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp ATTTGGAAGCAGAGACTGGAAGACGGTGGGACACACTaGCGGGCGCTGGCGTTCTGTTGGCTTGTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: IWKQRLEDGGTH*RALAFCWLVSA
Trigger: AGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GCCATGCTGCACACCCACTGTATTGCTTGCAAACGATaGTCCAACAGGCACGTGAGTCACCCCGATAGGCTG +
Preference number: 6 (lower is better)
Translates to: AMLHTHCIACKR*SNRHVSHPDRL
Trigger: CAGCCTATCGGGGTGACTCACGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp ATGAAACTGGTCATGATTCGTTGCTTCTGCCATGCCTaGCTTGGCTCGGTCTCTGCTTTGGGCCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: MKLVMIRCFCHA*LGSVSALGPGH
Trigger: GTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCATGGCAGAAGCAACGAATCATGACCAGTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp AGACGGTGGGACACACTGACGGGCGCTGGCGTTCTGTaGGCTTGTGTCAGCTGGTCTCCCGTAAAGTTTGAT +
Preference number: 6 (lower is better)
Translates to: RRWDTLTGAGVL*ACVSWSPVKFD
Trigger: ATCAAACTTTACGGGAGACCAGCTGACACAAGCCAACAGAACGCCAGCGCCCGTCAGTGTGTCCCACCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp GAGAGCAGTCTCTGCACCGTGTCATTTAGTGACCGGAACTGGCTTTaGTCGGGTGTCACAGCATGGGCTTGGTCCCTCTGTAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: ESSLCTVSFSDRNWL*SGVTAWAWSLCNCW
Trigger: CCAGCAGTTACAGAGGGACCAAGCCCATGCTGTGACACCCGACAAAAGCCAGTTCCGGTCACTAAATGACACGGTGCAGAGACTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp GCATCTGTCCCCCGACGATCTGAGGAGAGGCGTGGTTaGCTATCACTGGACTTCCAGAGGTGGCAAAAGTCT +
Preference number: 6 (lower is better)
Translates to: ASVPRRSEERRG*LSLDFQRWQKS
Trigger: AGACTTTTGCCACCTCTGGAAGTCCAGTGATAGTCAACCACGCCTCTCCTCAGATCGTCGGGGGACAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GCTTTCTGGTTGTGCCTGTGTGGCCCCCAAGGTCGCTaGCATAATTTTGCTTCCAGAATCCTGTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: AFWLCLCGPQGR*HNFASRILSWQ
Trigger: CTGCCAGGACAGGATTCTGGAAGCAAAATTATGCCAGCGACCTTGGGGGCCACACAGGCACAACCAGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AGCAGTCTCTGCACCGTGTCATTTAGTGACCGGAACTaGCTTTTGTCGGGTGTCACAGCATGGGCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: SSLCTVSFSDRN*LLSGVTAWAWS
Trigger: GGACCAAGCCCATGCTGTGACACCCGACAAAAGCCAGTTCCGGTCACTAAATGACACGGTGCAGAGACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CCGGAGCCACTAATCTGGCTGCTGTTAGGCAAATGCTaGCTGGGAACACTGATCCCCACGTGTTGCATAAAG +
Preference number: 6 (lower is better)
Translates to: PEPLIWLLLGKC*LGTLIPTCCIK
Trigger: CTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCCTAACAGCAGCCAGATTAGTGGCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp ACTGCCTGCGAGGTGACAGGCTTTCTCGTGTTCTGTTaGTTGACAATGTTCACAGACATGTGCGGCCCAACC +
Preference number: 6 (lower is better)
Translates to: TACEVTGFLVFC*LTMFTDMCGPT
Trigger: GGTTGGGCCGCACATGTCTGTGAACATTGTCAACCAACAGAACACGAGAAAGCCTGTCACCTCGCAGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp TTTAGTCAGCTGTTTGGCAGCAGGCCTTTTCTGTCCTaGATGACTATCCACCTGCACAGCTGTCTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: FSQLFGSRPFLS*MTIHLHSCLAR
Trigger: CCGAGCCAGACAGCTGTGCAGGTGGATAGTCATCCAGGACAGAAAAGGCCTGCTGCCAAACAGCTGACTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AGTGACCGGAACTGGCTTTTGTCGGGTGTCACAGCATaGGCTTGGTCCCTCTGTAACTGCTGGAGGATGAAA +
Preference number: 6 (lower is better)
Translates to: SDRNWLLSGVTA*AWSLCNCWRMK
Trigger: TTTCATCCTCCAGCAGTTACAGAGGGACCAAGCCCATGCTGTGACACCCGACAAAAGCCAGTTCCGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp AGAAGGATGAAGCTGGGCTTGTGCAAACTGTTGGCTTaGGCCTATACTGGCATCCAGGTACGCCTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RRMKLGLCKLLA*AYTGIQVRLFC
Trigger: GCAGAAGAGGCGTACCTGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCACAAGCCCAGCTTCATCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS TCA 72 bp GCTTGTCCCTCGACAGGGAAGCTCTTTCCTCCTGGTTaGACATCCTGTCAATCATCACCATCTCTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: ACPSTGKLFPPG*TSCQSSPSLQR
Trigger: CCTCTGCAGAGATGGTGATGATTGACAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCGAGGGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GGCAAATGCTGGCTGGGAACACTGATCCCCACGTGTTaGATAAAGCCATGCTGCACACCCACTGTATTGCTT +
Preference number: 6 (lower is better)
Translates to: GKCWLGTLIPTC*IKPCCTPTVLL
Trigger: AAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp TTGACTATCACTGGACTTCCAGAGGTGGCAAAAGTCTaGCCAGACACCAGCTGGACGGCGGTATTCTGGTTA +
Preference number: 6 (lower is better)
Translates to: LTITGLPEVAKV*PDTSWTAVFWL
Trigger: TAACCAGAATACCGCCGTCCAGCTGGTGTCTGGGCAGACTTTTGCCACCTCTGGAAGTCCAGTGATAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GCTGGGCTTGTGCAAACTGTTGGCTTGAGCCTATACTaGCATCCAGGTACGCCTCTTCTGCCAATGTCTGTT +
Preference number: 6 (lower is better)
Translates to: AGLVQTVGLSLY*HPGTPLLPMSV
Trigger: AACAGACATTGGCAGAAGAGGCGTACCTGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCACAAGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS CCA 72 bp TCTGTGATGGCCTCAAGCCGTCTGTGGTCTTGGATGTaGGAATGGGGGAGGTCTGGTTCAAACACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SVMASSRLWSWM*EWGRSGSNTSS
Trigger: AGAAGAAGTGTTTGAACCAGACCTCCCCCATTCCCACATCCAAGACCACAGACGGCTTGAGGCCATCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp AGGCAAATGCTGGCTGGGAACACTGATCCCCACGTGTaGCATAAAGCCATGCTGCACACCCACTGTATTGCT +
Preference number: 6 (lower is better)
Translates to: RQMLAGNTDPHV*HKAMLHTHCIA
Trigger: AGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp CGCTTGTCCCTCGACAGGGAAGCTCTTTCCTCCTGGTaGAACATCCTGTCAATCATCACCATCTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: RLSLDREALSSW*NILSIITISAE
Trigger: CTCTGCAGAGATGGTGATGATTGACAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCGAGGGACAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp AGTTCCAGGATGTTCTTAAAGGTTTTCTCTAGGCTCTaGGTGAGCTGGAGATCTGGCTGGGGCTCACCCGAC +
Preference number: 6 (lower is better)
Translates to: SSRMFLKVFSRL*VSWRSGWGSPD
Trigger: GTCGGGTGAGCCCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp GCTGCTGTTAGGCAAATGCTGGCTGGGAACACTGATCCCCACGTGTaGCATAAAGCCATGCTGCACACCCACTGTATTGCTTGCAAACGA +
Preference number: 6 (lower is better)
Translates to: AAVRQMLAGNTDPHV*HKAMLHTHCIACKR
Trigger: TCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCCTAACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp ATGTCTGTGTGTAAAACCTCATTCTTTGGGGAATTCCTCAGCGCTTaGTCCTGGAAGGAGTCGAGACAGGGCATCTCCATGTGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: MSVCKTSFFGEFLSA*SWKESRQGISMCEL
Trigger: CAGCTCGCACATGGAGATGCCCTGTCTCGACTCCTTCCAGGACAAAGCGCTGAGGAATTCCCCAAAGAATGAGGTTTTACACACAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp GAGTTCTTGAGTTCCAGGATGTTCTTAAAGGTTTTCTCTAGGCTCTaGGTGAGCTGGAGATCTGGCTGGGGCTCACCCGACCCTTTCATG +
Preference number: 6 (lower is better)
Translates to: EFLSSRMFLKVFSRL*VSWRSGWGSPDPFM
Trigger: CATGAAAGGGTCGGGTGAGCCCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACTCAAGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GGAACACTGATCCCCACGTGTTGCATAAAGCCATGCTaGACACCCACTGTATTGCTTGCAAACGATGCTCCA +
Preference number: 6 (lower is better)
Translates to: GTLIPTCCIKPC*TPTVLLANDAP
Trigger: TGGAGCATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp CTGGGAACACTGATCCCCACGTGTTGCATAAAGCCATaGTGCACACCCACTGTATTGCTTGCAAACGATGCT +
Preference number: 6 (lower is better)
Translates to: LGTLIPTCCIKP*CTPTVLLANDA
Trigger: AGCATCGTTTGCAAGCAATACAGTGGGTGTGCAGCATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AGACGCTTGTCCCTCGACAGGGAAGCTCTTTCCTCCTaGTTGAACATCCTGTCAATCATCACCATCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RRLSLDREALSS*LNILSIITISA
Trigger: TGCAGAGATGGTGATGATTGACAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCGAGGGACAAGCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp ATGTTCTTAAAGGTTTTCTCTAGGCTCTTGGTGAGCTaGAGATCTGGCTGGGGCTCACCCGACCCTTTCATG +
Preference number: 6 (lower is better)
Translates to: MFLKVFSRLLVS*RSGWGSPDPFM
Trigger: CATGAAAGGGTCGGGTGAGCCCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAACCTTTAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp AAGAAGGATGAAGCTGGGCTTGTGCAAACTGTTGGCTaGAGCCTATACTGGCATCCAGGTACGCCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: KKDEAGLVQTVG*SLYWHPGTPLL
Trigger: CAGAAGAGGCGTACCTGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCACAAGCCCAGCTTCATCCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS CAA 90 bp ATGCTGATGAAGAAGGATGAAGCTGGGCTTGTGCAAACTGTTGGCTaGAGCCTATACTGGCATCCAGGTACGCCTCTTCTGCCAATGTCT +
Preference number: 6 (lower is better)
Translates to: MLMKKDEAGLVQTVG*SLYWHPGTPLLPMS
Trigger: AGACATTGGCAGAAGAGGCGTACCTGGATGCCAGTATAGGCTCAAGCCAACAGTTTGCACAAGCCCAGCTTCATCCTTCTTCATCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS TCA 72 bp TGGATCCCAAGGTTGTTCACATTGTACGCGCTCTGCTaGCCCATCTGGACCGGCTTTGGCTGGATATTAATT +
Preference number: 6 (lower is better)
Translates to: WIPRLFTLYALC*PIWTGFGWILI
Trigger: AATTAATATCCAGCCAAAGCCGGTCCAGATGGGTCAGCAGAGCGCGTACAATGTGAACAACCTTGGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp TGTCAAGCGGGGTCTCAGGTACAGCTTCGTCAAGTTTaGAGGAACAACAGAAATCGGCCTGAAAACCCTCAG +
Preference number: 6 (lower is better)
Translates to: CQAGSQVQLRQV*RNNRNRPENPQ
Trigger: CTGAGGGTTTTCAGGCCGATTTCTGTTGTTCCTTCAAACTTGACGAAGCTGTACCTGAGACCCCGCTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AAAGTCTGCCCAGACACCAGCTGGACGGCGGTATTCTaGTTATTAAGCATCTGTCCGGAATATGGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: KVCPDTSWTAVF*LLSICPEYGWL
Trigger: CAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACCGCCGTCCAGCTGGTGTCTGGGCAGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp TGTAAAACCTCATTCTTTGGGGAATTCCTCAGCGCTTaGTCCTGGAAGGAGTCGAGACAGGGCATCTCCATG +
Preference number: 6 (lower is better)
Translates to: CKTSFFGEFLSA*SWKESRQGISM
Trigger: CATGGAGATGCCCTGTCTCGACTCCTTCCAGGACAAAGCGCTGAGGAATTCCCCAAAGAATGAGGTTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp GATTTAGGGTCAGCGTTCGTGGAGTTGGCGAAAATTGAATTAGAATaGGCTGCAGAATACCCTGCGTTCGTCACATCATCGCTGCCCGAT +
Preference number: 6 (lower is better)
Translates to: DLGSAFVELAKIELE*AAEYPAFVTSSLPD
Trigger: ATCGGGCAGCGATGATGTGACGAACGCAGGGTATTCTGCAGCCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS CAA 90 bp CTGGACGGCGGTATTCTGGTTATTAAGCATCTGTCCGGAATATGGTaGGTTGGTCCTGAGCATGTTAGAGGAATTCCTGTTCAGCATGAC +
Preference number: 6 (lower is better)
Translates to: LDGGILVIKHLSGIW*VGPEHVRGIPVQHD
Trigger: GTCATGCTGAACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACCGCCGTCCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp ACGGCGGTATTCTGGTTATTAAGCATCTGTCCGGAATATGGTTGGTaGGTCCTGAGCATGTTAGAGGAATTCCTGTTCAGCATGACATGC +
Preference number: 6 (lower is better)
Translates to: TAVFWLLSICPEYGW*VLSMLEEFLFSMTC
Trigger: GCATGTCATGCTGAACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACCGCCGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp CGATTTAGGGTCAGCGTTCGTGGAGTTGGCGAAAATTaGATTAGAATTGGCTGCAGAATACCCTGCGTTCGT +
Preference number: 6 (lower is better)
Translates to: RFRVSVRGVGEN*IRIGCRIPCVR
Trigger: ACGAACGCAGGGTATTCTGCAGCCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCTAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS TCA 72 bp AGGATTTCTGAAGAATGTCAAAGGGTTGGTCCTCGCTaGGATCGGGGAGAGGTGAAGACTCAAGTTCATCTT +
Preference number: 6 (lower is better)
Translates to: RISEECQRVGPR*DRGEVKTQVHL
Trigger: AAGATGAACTTGAGTCTTCACCTCTCCCCGATCTCAGCGAGGACCAACCCTTTGACATTCTTCAGAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS TCA 72 bp CACGTGAGTCACCCCGATAGGCTGCAGTGTCTGACCTaGGTAATTAGAAACATTAGAAGCCTGAGTAAAGGA +
Preference number: 6 (lower is better)
Translates to: HVSHPDRLQCLT*VIRNIRSLSKG
Trigger: TCCTTTACTCAGGCTTCTAATGTTTCTAATTACTCAGGTCAGACACTGCAGCCTATCGGGGTGACTCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS GCA 72 bp GAAATTTGTGCTGTTAAATGGAACGGTGACAGGCTGTaGTACAGGACTGGAAGTGGAGTTCCCAAACAGAGA +
Preference number: 6 (lower is better)
Translates to: EICAVKWNGDRL*YRTGSGVPKQR
Trigger: TCTCTGTTTGGGAACTCCACTTCCAGTCCTGTAGCACAGCCTGTCACCGTTCCATTTAACAGCACAAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp CCTTTGAGGGCCGATTTAGGGTCAGCGTTCGTGGAGTaGGCGAAAATTGAATTAGAATTGGCTGCAGAATAC +
Preference number: 6 (lower is better)
Translates to: PLRADLGSAFVE*AKIELELAAEY
Trigger: GTATTCTGCAGCCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCTAAATCGGCCCTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS TCA 72 bp TATTTGTTCAGCATAGCTTGGGTCCTTTTGAGGAGCTaGGTGGCGACCTCTTCAAATTCATTGTCCACTTGC +
Preference number: 6 (lower is better)
Translates to: YLFSIAWVLLRS*VATSSNSLSTC
Trigger: GCAAGTGGACAATGAATTTGAAGAGGTCGCCACTCAGCTCCTCAAAAGGACCCAAGCTATGCTGAACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp TTTACTGCTAGGTCCGTGCAGAAAATAGTTCAATGCTaGTGGGTCTCCAATAAGATCGAGGAGACAGGAGTC +
Preference number: 6 (lower is better)
Translates to: FTARSVQKIVQC*WVSNKIEETGV
Trigger: GACTCCTGTCTCCTCGATCTTATTGGAGACCCACAAGCATTGAACTATTTTCTGCACGGACCTAGCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040624.7
ENSMUST00000233455.2
ENSMUST00000233537.2
CDS CAA 72 bp AGATGGGGCTTGCTGCCCACTGCCTTTCAGTATGATTaGAGAGCCATCGAGGTTATTTATAGTCATCATGGA +
Preference number: 6 (lower is better)
Translates to: RWGLLPTAFQYD*RAIEVIYSHHG
Trigger: TCCATGATGACTATAAATAACCTCGATGGCTCTCAAATCATACTGAAAGGCAGTGGGCAGCAAGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 90 bp ACTCACATTAGATGGGGCTTGCTGCCCACTGCCTTTCAGTATGATTaGAGAGCCATCGAGGTTATTTATAGTCATCATGGAAGGCTGATT +
Preference number: 6 (lower is better)
Translates to: THIRWGLLPTAFQYD*RAIEVIYSHHGRLI
Trigger: AATCAGCCTTCCATGATGACTATAAATAACCTCGATGGCTCTCAAATCATACTGAAAGGCAGTGGGCAGCAAGCCCCATCTAATGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp TTCTGGTTATTAAGCATCTGTCCGGAATATGGTTGGTaGGTCCTGAGCATGTTAGAGGAATTCCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: FWLLSICPEYGW*VLSMLEEFLFS
Trigger: GCTGAACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp GTATTCTGGTTATTAAGCATCTGTCCGGAATATGGTTaGTTGGTCCTGAGCATGTTAGAGGAATTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: VFWLLSICPEYG*LVLSMLEEFLF
Trigger: GAACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp CCTAAGACCCCTCTGTCAAATTTCAGTGTTCTACTGTaGCCTTCTGACTTTTTAGAAATGTTTCCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: PKTPLSNFSVLL*PSDFLEMFPSA
Trigger: TGCAGAGGGAAACATTTCTAAAAAGTCAGAAGGCCACAGTAGAACACTGAAATTTGACAGAGGGGTCTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CCA 72 bp AACACTCTAGAATACTATTTACAGCTGCTTCTAAAATaGAGTCCGTTTCTACAACGCCTTCACTGTGGTCCG +
Preference number: 6 (lower is better)
Translates to: NTLEYYLQLLLK*SPFLQRLHCGP
Trigger: CGGACCACAGTGAAGGCGTTGTAGAAACGGACTCCATTTTAGAAGCAGCTGTAAATAGTATTCTAGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS CAA 72 bp GGTATTCTGGTTATTAAGCATCTGTCCGGAATATGGTaGGTTGGTCCTGAGCATGTTAGAGGAATTCCTGTT +
Preference number: 6 (lower is better)
Translates to: GILVIKHLSGIW*VGPEHVRGIPV
Trigger: AACAGGAATTCCTCTAACATGCTCAGGACCAACCAACCATATTCCGGACAGATGCTTAATAACCAGAATACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2
CDS TCA 72 bp GACCGGCTTTGGCTGGATATTAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCTTTGAATAATGATGTT +
Preference number: 6 (lower is better)
Translates to: DRLWLDINWDFI*IWCKTPLNNDV
Trigger: AACATCATTATTCAAAGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATTAATATCCAGCCAAAGCCGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040624.7
ENSMUST00000233537.2