RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICRA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070808

Ensembl transcript IDs: ENSMUST00000094821.4, ENSMUST00000210781.2

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCGTGGTGGGCTGGAGGCAAGAAGAATACAGGGAAGACTGCTTaGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: VAWWAGGKKNTGKTA*EKEGRPRVLFLWRD
Trigger: ATCCCTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 90 bp AGTACTAGTTTTGTCTCCGAAATTTCAAAACGTGGCGTGGTGGGCTaGAGGCAAGAAGAATACAGGGAAGACTGCTTGGGAGAAGGAAGG +
Preference number: 1 (lower is better)
Translates to: STSFVSEISKRGVVG*RQEEYREDCLGEGR
Trigger: CCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCACGTTTTGAAATTTCGGAGACAAAACTAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAAATTTCAAAACGTGGCGTGGTaGGCTGGAGGCAAGAAGAATACAGGGAAGACTGCTTGGGAGAAG +
Preference number: 1 (lower is better)
Translates to: LTVLVLSPKFQNVAW*AGGKKNTGKTAWEK
Trigger: CTTCTCCCAAGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCACGTTTTGAAATTTCGGAGACAAAACTAGTACTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAAATTTCAAAACGTGGCGTaGTGGGCTGGAGGCAAGAAGAATACAGGGAAGACTGCTTGGGAG +
Preference number: 1 (lower is better)
Translates to: YLTVLVLSPKFQNVA*WAGGKKNTGKTAWE
Trigger: CTCCCAAGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCACGTTTTGAAATTTCGGAGACAAAACTAGTACTGTAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR-3UTR GCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGTCGGCGGTCAGGCTaGTCTCCTGGAAGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGRRSG*SPGSGV
Trigger: AACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCTGCTCTCCTGGAAGTaGGGTTGGGGGCACTCTATG +
Preference number: 2 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPLLSWK*GWGHSM
Trigger: CATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATCCTGGAAGTGGGGTTaGGGGCACTCTATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: PVLACARGTLYLIAHLPLSWKWG*GHSMRA
Trigger: AGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGGTCGGCGGTCAGGCTaGTCTCCTGGAAGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGGRRSG*SPGSGV
Trigger: AACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR GCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCCCTGTCCTGGCTTGTaGCAGGGGGACGTTGTACCT +
Preference number: 2 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSPCPGL*QGDVVP
Trigger: AGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTGCTCTCCTGGAAGTaGGGTTGGGGGCACTCTATG +
Preference number: 2 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSLLSWK*GWGHSM
Trigger: CATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAG...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTTCCTGGAAGTGGGGTTaGGGGCACTCTATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGSWKWG*GHSMRA
Trigger: AGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGA...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTATGTATCCCCTGTCCTaGCTTGTGCCAGGGGGACGT +
Preference number: 2 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGMYPLS*LVPGGR
Trigger: ACGTCCCCCTGGCACAAGCCAGGACAGGGGATACAT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR GCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCCCCTGTCCTGGCTTGTaGCAGGGGGACGTTGTACCT +
Preference number: 2 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTPCPGL*QGDVVP
Trigger: AGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR TCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTCTGTGGGCAACAGGATaGGAGTTGAGCCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSLWATG*ELSLSE
Trigger: TTCTGAAAGGCTCAACTCTCATCCTGTTGCCCACAG...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR-3UTR GCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATACTGGCTTGAGTCCTTaGTTCCTAATCTTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SLSRARTHTQDDSGECTYTGLSP*FLIFQA
Trigger: AGCCTGAAAGATTAGGAAGCAAGGACTCAAGCCAGT...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 72 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTaGGGGCACTCTATGAGGGCTGCAGAAGCAGCCCGG +
Preference number: 3 (lower is better)
Translates to: RSAVRLLSWKWG*GHSMRAAEAAR
Trigger: CCGGGCTGCTTCTGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR CCA 72 bp AGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTaGGGTTGGGGGCACTCTATGAGGGCTGCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: RWRSAVRLLSWK*GWGHSMRAAEA
Trigger: TGCTTCTGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR-3UTR CAA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCTCCTGGAAGTGGGGTaGGGGGCACTCTATGAGGGC +
Preference number: 3 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGLLEVG*GALYEG
Trigger: GCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR GCA 72 bp CCTAGGCAACACTCATGTATCCCCTGTCCTGGCTTGTaGCAGGGGGACGTTGTACCTTATAGCCCACCTTCC +
Preference number: 3 (lower is better)
Translates to: PRQHSCIPCPGL*QGDVVPYSPPS
Trigger: GGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGGGATACATGAGTGTTGCCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR GCA 72 bp CGTGCACGCACACATACACAGGATGACTCCGGTGAGTaGACGTATGGATGGGATGCAGGTACCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: RARTHTQDDSGE*TYGWDAGTSLS
Trigger: AGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 72 bp TGGGCTGGAGGCAAGAAGAATACAGGGAAGACTGCTTaGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: WAGGKKNTGKTA*EKEGRPRVLFL
Trigger: GAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR-3UTR CAA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCTGGGATGTAGGTACTTaGGGACACTGGCTTGAGTCC +
Preference number: 3 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLWDVGT*GHWLES
Trigger: GGACTCAAGCCAGTGTCCCAAAGTACCTACATCCCA...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR GCA 72 bp CGTGCACGCACACATACACAGGATGACTCCGGTGAGTaGACGTATGGATGGGATGTAGGTACTTTGGGACAC +
Preference number: 3 (lower is better)
Translates to: RARTHTQDDSGE*TYGWDVGTLGH
Trigger: GTGTCCCAAAGTACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR GCA 72 bp CGCACACACACACACACACAGGATGACTCAGGTGAATaGACGTATGGATGGGATGCAGGTCCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: RTHTHTQDDSGE*TYGWDAGPLSL
Trigger: GAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGTGTGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 72 bp CATACACAGGATGACTCCGGTGAGTGCACGTATGGATaGGATGTAGGTACTTTGGGACACTGGCTTGAGTCC +
Preference number: 3 (lower is better)
Translates to: HTQDDSGECTYG*DVGTLGHWLES
Trigger: GGACTCAAGCCAGTGTCCCAAAGTACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR CCA 72 bp CATACACAGGATGACTCCGGTGAGTGCACGTATGGATaGGATGCAGGTACCTCTCTCTCTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: HTQDDSGECTYG*DAGTSLSLSLS
Trigger: AGAGAGAGAGAGAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 72 bp CACACACAGGATGACTCAGGTGAATGCACGTATGGATaGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: HTQDDSGECTYG*DAGPLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR-3UTR CAA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCCACTGGCTTGAGTCCTaGCTTCCTAATCTTTCAGGC +
Preference number: 3 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSHWLES*LPNLSG
Trigger: GCCTGAAAGATTAGGAAGCAAGGACTCAAGCCAGTG...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR TCA 72 bp TGCTTCCTAATCTTTCAGGCTCTGTGGGCAACAGGATaGGAGTTGAGCCTTTCAGAAGATCTCTCCCGGCTC +
Preference number: 3 (lower is better)
Translates to: CFLIFQALWATG*ELSLSEDLSRL
Trigger: GAGCCGGGAGAGATCTTCTGAAAGGCTCAACTCTCATCCTGTTGCCCACAGAGCCTGAAAGATTAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR CCA 72 bp TTTGTCTCCGAAATTTCAAAACGTGGCGTGGTGGGCTaGAGGCAAGAAGAATACAGGGAAGACTGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: FVSEISKRGVVG*RQEEYREDCLG
Trigger: TCCCAAGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCACGTTTTGAAATTTCGGAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 72 bp CTAGTTTTGTCTCCGAAATTTCAAAACGTGGCGTGGTaGGCTGGAGGCAAGAAGAATACAGGGAAGACTGCT +
Preference number: 3 (lower is better)
Translates to: LVLSPKFQNVAW*AGGKKNTGKTA
Trigger: AGCAGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCACGTTTTGAAATTTCGGAGACAAAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CCA 72 bp GTACTAGTTTTGTCTCCGAAATTTCAAAACGTGGCGTaGTGGGCTGGAGGCAAGAAGAATACAGGGAAGACT +
Preference number: 3 (lower is better)
Translates to: VLVLSPKFQNVA*WAGGKKNTGKT
Trigger: AGTCTTCCCTGTATTCTTCTTGCCTCCAGCCCACCACGCCACGTTTTGAAATTTCGGAGACAAAACTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCCAGCTCCTTTGGTaGCGGGCGTGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGQLLW*RAWPGL
Trigger: CAGCCCTGGCCACGCCCGTCACCAAAGGAGCTGGCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGGTCGCAGAGGAGGCTaGGGTGGGCCCGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRGRRGG*GGPGAV
Trigger: CACAGCCCCGGGCCCACCCCAGCCTCCTCTGCGACC...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGAGGCTGGGGGCAGTaGGCCCTCTGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGGWGQ*ALWRLG
Trigger: TCCCAGCCTCCAGAGGGCCCACTGCCCCCAGCCTCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGAGTGGGGGCGGAGCTaGGTGTGGCGGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAEWGRS*VWRRLR
Trigger: GCGGAGCCTCCGCCACACCCAGCTCCGCCCCCACTC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCCTGTGCAGGGGCGCTaGGGATGTGGGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGPVQGR*GCGGAR
Trigger: CCTGGCACCCCCACATCCCCAGCGCCCCTGCACAGG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGAGCCGGCTGGCTCTaGGTAGGCAGGCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGAGWL*VGRLPV
Trigger: CACTGGCAGCCTGCCTACTCAGAGCCAGCCGGCTCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCCAGCTCCTTTGGTaGCGGGCGTGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEGQLLW*RAWPGL
Trigger: CAGCCCTGGCCACGCCCGTCACCAAAGGAGCTGGCC...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCAGGGTGACGCCCTaGAGGACGGTGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGRVTP*RTVVAV
Trigger: CACAGCCACCACCGTCCTCCAGGGCGTCACCCTGCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTGGCCTGAGGAGGGGTaGCCTGAGGCTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRWPEEG*PEAGWP
Trigger: CGGCCACCCAGCCTCAGGCCACCCCTCCTCAGGCCA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGGGCGGAGCTGGGTGTaGCGGAGGCTCCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAGRSWV*RRLRPF
Trigger: AAAGGGGCGGAGCCTCCGCCACACCCAGCTCCGCCC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGGGCGGAGCTGGGTGTaGCGGAGGCTCCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRGRSWV*RRLRPF
Trigger: AAAGGGGCGGAGCCTCCGCCACACCCAGCTCCGCCC...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGAGTGGGGGCGGAGCTaGGTGTGGCGGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGEWGRS*VWRRLR
Trigger: GCGGAGCCTCCGCCACACCCAGCTCCGCCCCCACTC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCGGCTGTCCCGAGGGTaGCCCACTGGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYERLSRG*PTGCCS
Trigger: ACTGCAGCAGCCAGTGGGGCACCCTCGGGACAGCCG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTGGGGGACCCTGGGGTaGAGGGCAAGGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEWGTLG*RARVQG
Trigger: ACCCTGCACCCTTGCCCTCCACCCCAGGGTCCCCCA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGGTCCCCAGGGTGGTaGATGTCTGTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGSPGW*MSVGWW
Trigger: CCACCACCCCACAGACATCCACCACCCTGGGGACCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGTGGCCGGTTACGGGTaGGCATGGGGCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGVAGYG*AWGRPH
Trigger: ATGAGGACGGCCCCATGCCCACCCGTAACCGGCCAC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTACGGCTGTCCGGGGTCTaGGCGCCGAGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLRLSGV*APRPAP
Trigger: AGGAGCTGGCCTCGGCGCTCAGACCCCGGACAGCCG...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTGCCCCACTGGCTGCTaGAGTGGCAGCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGCPTGC*SGSPCP
Trigger: GGGACAGGGGCTGCCACTGCAGCAGCCAGTGGGGCA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGGGTGCCCCACTGGCTaGTGCAGTGGCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGGCPTG*CSGSPC
Trigger: ACAGGGGCTGCCACTGCAGCAGCCAGTGGGGCACCC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTGCCCCAGAGTGGGGTaGCAGCACTGGGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYECPRVG*QHWAQT
Trigger: AGTCTGGGCCCAGTGCTGGCACCCCACTCTGGGGCA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGTGTGCAGCGCTGTGTaGCCCAGAGTGGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAVCSAV*PRVGCQ
Trigger: CTGGCACCCCACTCTGGGGCACACAGCGCTGCACAC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGAGGGGGCACCTGGGTTaGAGGCTGAACGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGRGHLG*RLNGQN
Trigger: GTTCTGGCCGTTCAGCCTGCAACCCAGGTGCCCCCT...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGAAGGCGTCAGGCCTGTaGAGGGGCGCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRKASGL*RGAGDV
Trigger: CACATCCCCAGCGCCCCTGCACAGGCCTGACGCCTT...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAACGCTGGGGGCAGGCTaGCTGGGCTCAGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAATLGAG*LGSGFR
Trigger: CCTAAACCCTGAGCCCAGCCAGCCTGCCCCCAGCGT...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGAGTCCAGGTCCACGCTaGGGGCAGGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGSPGPR*GQAGWA
Trigger: AGCCCAGCCAGCCTGCCCCCAGCGTGGACCTGGACT...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCACAGATCCGCGCTGCCTaGGAAGAGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAQIRAA*EESLGS
Trigger: GGACCCCAGGCTCTCTTCCCAGGCAGCGCGGATCTG...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGGTGGCACCAGGGCCTaGTGGGTCAGTACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAGGTRA*WVSTVG
Trigger: GCCCACTGTACTGACCCACCAGGCCCTGGTGCCACC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGCTGAGGGCCCCTGGTaGCTGTGGCGGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLAEGPW*LWRGCP
Trigger: GGGACAGCCCCGCCACAGCCACCAGGGGCCCTCAGC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTTTGCTGAGGGCCCCTaGTGGCTGTGGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEFAEGP*WLWRGC
Trigger: ACAGCCCCGCCACAGCCACCAGGGGCCCTCAGCAAA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGCAGCTGTGAGGATCTaGCCTCCCACGTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGAAVRI*PPTLAG
Trigger: GCCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCACTGGGTGGCCGCCTGTaGAGTAGGGACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAALGGRL*SRDLWR
Trigger: CCTCCACAGGTCCCTACTCCACAGGCGGCCACCCAG...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGGCGTGGCCAGGGCTaGGTCTTGGGCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGRGQG*VLGRRR
Trigger: CCGCCTCCTGCCCAAGACCCAGCCCTGGCCACGCCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGCAGCTGCAGGGATCTaGGGAGCCGGAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEAAAGI*GAGAGE
Trigger: TTCCCCAGCTCCGGCTCCCCAGATCCCTGCAGCTGC...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCAGCTGCAGGGATCTaGGGAGCCGGAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRAAAGI*GAGAGE
Trigger: TTCCCCAGCTCCGGCTCCCCAGATCCCTGCAGCTGC...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTGGGGGACCCTGGGGTaGAGGGCAAGGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGWGTLG*RARVQG
Trigger: ACCCTGCACCCTTGCCCTCCACCCCAGGGTCCCCCA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGAGAGTTGGGGGACCCTaGGGTGGAGGGCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYERVGGP*GGGQGC
Trigger: GCACCCTTGCCCTCCACCCCAGGGTCCCCCAACTCT...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCTCTGGAGGCTGGGATaGGGGTCGCAGAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYELWRLG*GSQRRL
Trigger: CAGCCTCCTCTGCGACCCCCATCCCAGCCTCCAGAG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGCTCTGGAGGCTGGGATaGGGGTCGCAGAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRLWRLG*GSQRRL
Trigger: CAGCCTCCTCTGCGACCCCCATCCCAGCCTCCAGAG...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGAGGAGGGGGTGCCGTaGGCTCAGGGACCATGTGGA +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEEEGVP*AQGPCG
Trigger: TCCACATGGTCCCTGAGCCCACGGCACCCCCTCCTC...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGAAGACGACTGGCCATaGCTGGGGAGCCGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGEDDWP*LGSRWP
Trigger: GGGCCACCGGCTCCCCAGCCATGGCCAGTCGTCTTC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGAAGGCCCTGGAGGCCTaGAATGGGCTGAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGKALEA*NGLKGH
Trigger: GTGACCCTTCAGCCCATTTCAGGCCTCCAGGGCCTT...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGTGGTGCTGCAGCTGTaGGGATCTGGCCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAVVLQL*GSGLPR
Trigger: ACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCAC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTCGGCTGTCCGGGGTCTaGGCGCCGAGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLRLSGV*APRPAP
Trigger: AGGAGCTGGCCTCGGCGCTCAGACCCCGGACAGCCG...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCCTGGGAAGAGAGCCTaGGGTCCTGCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEPGKRA*GPAVTA
Trigger: GGCAGTGACTGCAGGACCCCAGGCTCTCTTCCCAGG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTCCCAGGACTGCCATTaGGAAGGCCCTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRSQDCH*EGPGGL
Trigger: CAGGCCTCCAGGGCCTTCCCAATGGCAGTCCTGGGA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGCTGAGGGCCCCTGGTaGCTGTGGCGGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLAEGPW*LWRGCP
Trigger: GGGACAGCCCCGCCACAGCCACCAGGGGCCCTCAGC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGATGGAGGGCGTGAGTaGGGTCTTGAGGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGDGGRE*GLEGGR
Trigger: CCGCCCACCCTCAAGACCCCACTCACGCCCTCCATC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTCAGGCTCTGGGGCTaGGATGGAGGGCGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGVRLWG*DGGREW
Trigger: CCACTCACGCCCTCCATCCCAGCCCCAGAGCCTGAC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGAGGCTGGGGGCAGTaGGCCCTCTGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGGWGQ*ALWRLG
Trigger: TCCCAGCCTCCAGAGGGCCCACTGCCCCCAGCCTCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGGTCCCTGGCTCGGTaGGAACTGGAGTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGSLAR*ELELEV
Trigger: GACTTCCAACTCCAGTTCCCACCGAGCCAGGGACCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGAAGGTCCGAGGTGGTaGAGGAGGGGGTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPEGPRW*RRGCRG
Trigger: CCCACGGCACCCCCTCCTCCACCACCTCGGACCTTC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGGGCGGTTACCATCTaGAAGGTCCGAGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGAVTI*KVRGGG
Trigger: TCCACCACCTCGGACCTTCCAGATGGTAACCGCCCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGTGCTGGGGGCTTCCCTaGCCCAGACACGGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGCWGLP*PRHGSF
Trigger: AAAGCTACCGTGTCTGGGCCAGGGAAGCCCCCAGCA...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGCCCTCGGAAGACACTaGGACAGGGAAGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGALGRH*DREAKG
Trigger: TCCCTTGGCTTCCCTGTCCCAGTGTCTTCCGAGGGC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGGTTACGGGTGGGCATaGGGCCGTCCTCATCTGCGT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAGYGWA*GRPHLR
Trigger: ACGCAGATGAGGACGGCCCCATGCCCACCCGTAACC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCTTCGTCTACCTTGGTaGGCAGTGGGGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYELRLPW*AVGWGC
Trigger: GCAGCCCCACCCCACTGCCCACCAAGGTAGACGAAG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTGGCTTCGTCTACCTTaGTGGGCAGTGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEWLRLP*WAVGWG
Trigger: GCCCCACCCCACTGCCCACCAAGGTAGACGAAGCCA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTACCTGTGCAGGGGCGCTaGGGATGTGGGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLPVQGR*GCGGAR
Trigger: CCTGGCACCCCCACATCCCCAGCGCCCCTGCACAGG...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGGAGCCGGCAAGGGCTaGTGCACAGGATCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGGAGKG*CTGSSA
Trigger: TGCACTGGATCCTGTGCATCAGCCCTTGCCGGCTCC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCAGCATTCCCAGGACTaGCATTGGGAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGQHSQD*HWEGPG
Trigger: TCCAGGGCCTTCCCAATGGCAGTCCTGGGAATGCTG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGGTGCCCCACTGGCTaGTGCAGTGGCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGCPTG*CSGSPC
Trigger: ACAGGGGCTGCCACTGCAGCAGCCAGTGGGGCACCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCTGTGGAGGCTGCTGTaGCTGTGGCTGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYELWRLL*LWLLET
Trigger: GGTCTCCAACAGCCACAGGCACAGCAGCCTCCACAG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTTTCAGTGGAGCAGCTaGAGGGATCTGGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEFQWSS*RDLGSR
Trigger: CCGGCTCCCCAGATCCCTGCAGCTGCTCCACTGAAA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTAGGATGTCACAGGGCTaGTCTGGGGCCCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLRMSQG*SGAPPP
Trigger: GGGCGGCGGGGCCCCAGACCAGCCCTGTGACATCCT...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTTGTTGACCACATCCTaGGGTGGCACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRLLTTS*GGTRAW
Trigger: CCAGGCCCTGGTGCCACCCCAGGATGTGGTCAACAA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGAGCTGGGAGGTGGGTaGGTTGAGAGCCATGACGGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGELGGG*VESHDG
Trigger: CCCGTCATGGCTCTCAACCCACCCACCTCCCAGCTC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGCAGGGTGACGCCCTaGAGGACGGTGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGRVTP*RTVVAV
Trigger: CACAGCCACCACCGTCCTCCAGGGCGTCACCCTGCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTGGCCTCCCCAGTGGTaGCAGCTGGAGTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGWPPQW*QLEWRV
Trigger: AACCCTCCACTCCAGCTGCCACCACTGGGGAGGCCA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTGGAGTAGGGACCTGTaGAGGCTGCTGTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRWSRDL*RLLCLW
Trigger: CCACAGGCACAGCAGCCTCCACAGGTCCCTACTCCA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAAGCCAGGCTTGGGCTaGCCTGAGGAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPKPGLG*PEEGWP
Trigger: AGGCCACCCCTCCTCAGGCCAGCCCAAGCCTGGCTT...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGCTGGAAGCCAGGCTTaGGCTGGCCTGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPAGSQA*AGLRRG
Trigger: ACCCCTCCTCAGGCCAGCCCAAGCCTGGCTTCCAGC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCCAGGGGCTTTCAGTaGAGCAGCTGCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRARGFQ*SSCRDL
Trigger: CAGATCCCTGCAGCTGCTCCACTGAAAGCCCCTGGC...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTGGTCGCAGAGGAGGCTaGGGTGGGCCCGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSGRRGG*GGPGAV
Trigger: CACAGCCCCGGGCCCACCCCAGCCTCCTCTGCGACC...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGGGCAGTGGGCCCTCTaGAGGCTGGGATGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLGQWAL*RLGWGS
Trigger: CGACCCCCATCCCAGCCTCCAGAGGGCCCACTGCCC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCATGTGGAGGGCTGGTaGCGGAGTAGGGGACTTATG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGHVEGW*RSRGLM
Trigger: CATAAGTCCCCTACTCCGCCACCAGCCCTCCACATG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGGTGGTGGATGTCTGTaGGGTGGTGGGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGGGGCL*GGGSTP
Trigger: GGGGGTACTCCCACCACCCCACAGACATCCACCACC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCGGGTGCTTCCCAACTaGGTTCAGTGGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPRVLPN*VQWGPG
Trigger: GCCAGGGCCCCACTGAACCCAGTTGGGAAGCACCCG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGCTAGAGAAGCTGGCCTaGTCCACGTCCGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRLEKLA*STSGDS
Trigger: TGAGTCCCCGGACGTGGACCAGGCCAGCTTCTCTAG...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGCGCTCAAGGCCTTGTTaGCCACATCCTGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGRSRPC*PHPGVA
Trigger: TGCCACCCCAGGATGTGGTCAACAAGGCCTTGAGCG...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAAGGCCAGGTAGCCACTaGCAGGTACCTGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAARPGSH*QVPALP
Trigger: TGGCAAAGCAGGTACCTGTCAGTGGCTACCTGGCCT...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTGCTGCTGCCTTGATTaGGGAGGTGGACGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYECCCLD*GGGRSW
Trigger: CCATGAGCGTCCACCTCCTCAATCAAGGCAGCAGCA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGACGATGCTGCTGCCTTaGTTGAGGAGGTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRTMLLP*LRRWTL
Trigger: GAGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGT...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCCGAGGCCACCATTGTaGCTAGAGGGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPPRPPL*LEGGKA
Trigger: CGCCTTCCCACCCTCTAGTCACAATGGTGGCCTCGG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCCCTCCACCTCCTCCTaGTGCAGGGGAGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPPSTSS*CRGAQD
Trigger: ATCTTGGGCTCCCCTGCAGCAGGAGGAGGTGGAGGG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTCCCAGGCCCACAGGCTaGAGGAAGGGCTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLPRPTG*RKGWTL
Trigger: GAGCGTCCAGCCCTTCCTGCAGCCTGTGGGCCTGGG...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGCTGCTGGGGCAAGGTaGCTGGTTCACCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPAAGAR*LVHPGW
Trigger: CCATCCAGGGTGAACCAGGCACCTTGCCCCAGCAGC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGTTGTACGGCTGGGGTaGCTGGCAGCAAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAVVRLG*LAARTG
Trigger: ACCAGTTCTTGCTGCCAGGCACCCCAGCCGTACAAC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTGCAGAGAGGATGTGTaGAGCGCTGTGTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRCREDV*SAVCPR
Trigger: TCTGGGGCACACAGCGCTGCACACATCCTCTCTGCA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGGGACCTGTGGAGGCTaGTGTGCCTGTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPGTCGG*CACGCW
Trigger: CCAACAGCCACAGGCACAGCAGCCTCCACAGGTCCC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGAGAGTGCCATTCATCTaGGCCTGGGTAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYERVPFI*AWVAGG
Trigger: CCCTCCTGCTACCCAGGCGCAGATGAATGGCACTCT...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGCGGCGGCACCAGGATTaGCCATGTTTTCTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRRRHQD*PCFLGR
Trigger: CCTACCGAGAAAACATGGGCAATCCTGGTGCCGCCG...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGAGCTGGGAGGTGGGTaGGTTGAGAGCCATGACGGG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPELGGG*VESHDG
Trigger: CCCGTCATGGCTCTCAACCCACCCACCTCCCAGCTC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCCCCGTGGTGGTGACTaGTGGCTGCTTGAACACATT +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGPRGGD*WLLEHI
Trigger: AATGTGTTCAAGCAGCCACCAGTCACCACCACGGGG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCACTGTCCACCTGCGTGTaGTGCTGCAGCTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAALSTCV*CCSCED
Trigger: ATCCTCACAGCTGCAGCACCACACGCAGGTGGACAG...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTCTGTGTGCCCCAGAGTaGGGTGCCAGCACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLLCAPE*GASTGP
Trigger: GGGCCCAGTGCTGGCACCCCACTCTGGGGCACACAG...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGCTGGCCCACCTGGATaGGAGCTGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGAGPPG*ELQRGC
Trigger: ACATCCTCTCTGCAGCTCCCATCCAGGTGGGCCAGC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTTGGCTGTGGGGCCAGTaGGAGCCGGCTGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLWLWGQ*EPAGSE
Trigger: CTCAGAGCCAGCCGGCTCCCACTGGCCCCACAGCCA...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTGGAGTAGGGACCTGTaGAGGCTGCTGTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGWSRDL*RLLCLW
Trigger: CCACAGGCACAGCAGCCTCCACAGGTCCCTACTCCA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGTCAGGCTCTGGGGCTaGGATGGAGGGCGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLVRLWG*DGGREW
Trigger: CCACTCACGCCCTCCATCCCAGCCCCAGAGCCTGAC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGGTGCTGGCTGGTGGTaGGGCGCCCAATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGGAGWW*GAQLIL
Trigger: CAGAATCAATTGGGCGCCCCACCACCAGCCAGCACC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCCACACTCAGGGTTaGAAGGTTGCTGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGHTQG*KVAGKS
Trigger: GCTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGTCATACTGAATTGCTaGGGGCTTCCCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGVILNC*GLPWPR
Trigger: TCTGGGCCAGGGAAGCCCCCAGCAATTCAGTATGAC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCACTTTATGGTAGTCGTTaGGGGAGGGGAGGGCGCCTT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAALYGSR*GRGGRL
Trigger: AAGGCGCCCTCCCCTCCCCCAACGACTACCATAAAG...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCACGACTGGCCATGGCTaGGGAGCCGGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLTTGHG*GAGGPR
Trigger: CCGAGGGCCACCGGCTCCCCAGCCATGGCCAGTCGT...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGGATCACTAGCTTGGTaGGCAGATGAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAGSLAW*ADEEGA
Trigger: AGCCCCCTCCTCATCTGCCCACCAAGCTAGTGATCC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGCCGGATCACTAGCTTaGTGGGCAGATGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGAGSLA*WADEEG
Trigger: CCCCTCCTCATCTGCCCACCAAGCTAGTGATCCGGC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGCCATTCATCTGCGCCTaGGTAGCAGGAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGPFICA*VAGGSG
Trigger: CCCACTCCCTCCTGCTACCCAGGCGCAGATGAATGG...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGGCTTCGTCTACCTTaGTGGGCAGTGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPWLRLP*WAVGWG
Trigger: GCCCCACCCCACTGCCCACCAAGGTAGACGAAGCCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGTTCAGTGGGGCCCTaGCTGGTAGCGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGSVGP*LVAEAG
Trigger: TCCAGCCTCCGCTACCAGCCAGGGCCCCACTGAACC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAAGGCCCTGGAGGCCTaGAATGGGCTGAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPKALEA*NGLKGH
Trigger: GTGACCCTTCAGCCCATTTCAGGCCTCCAGGGCCTT...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGCTGAAGGGTCACATTaGCCAGGCCCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPAEGSH*PGPQAA
Trigger: TGCAGCCTGTGGGCCTGGGCAATGTGACCCTTCAGC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTCCACCTGCGTGTGGTaGTGCAGCTGTGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGSTCVW*CSCEDL
Trigger: CAGATCCTCACAGCTGCAGCACCACACGCAGGTGGA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTGCAGAGAGGATGTGTaGAGCGCTGTGTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGCREDV*SAVCPR
Trigger: TCTGGGGCACACAGCGCTGCACACATCCTCTCTGCA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCTGTGGAGGCTGCTGTaGCTGTGGCTGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPLWRLL*LWLLET
Trigger: GGTCTCCAACAGCCACAGGCACAGCAGCCTCCACAG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGCTGTCATACTGAATTaGTGGGGGCTTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGAVILN*WGLPWP
Trigger: GGGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGGAAGCAGGCTTCTTTaGTGGGTTGCAGTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRGSRLL*WVAVGA
Trigger: AGCCCCTACTGCAACCCAGCAAAGAAGCCTGCTTCC...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGTCCGGCCGGGGGCCTaGTGCAGGTTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLVRPGA*CRLRML
Trigger: CAGCATCCTTAACCTGCAGCAGGCCCCCGGCCGGAC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATGGGGGCAGGCTGGCTaGGCTCAGGGTTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLWGQAG*AQGLGG
Trigger: ACCACCTAAACCCTGAGCCCAGCCAGCCTGCCCCCA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTAGTCCAGGTCCACGCTaGGGGCAGGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSSPGPR*GQAGWA
Trigger: AGCCCAGCCAGCCTGCCCCCAGCGTGGACCTGGACT...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCAGGATGTCACAGGGCTaGTCTGGGGCCCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSRMSQG*SGAPPP
Trigger: GGGCGGCGGGGCCCCAGACCAGCCCTGTGACATCCT...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTCAGATCCGCGCTGCCTaGGAAGAGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLQIRAA*EESLGS
Trigger: GGACCCCAGGCTCTCTTCCCAGGCAGCGCGGATCTG...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGGTGGGTCAGTACAGTaGGCGGGGCTTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLGGSVQ*AGLAAP
Trigger: TGGGGCTGCAAGCCCCGCCCACTGTACTGACCCACC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTGTCAGACCCAAGGTaGCTGCTGCAGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGVSDPR*LLQHSQ
Trigger: CTGGGAATGCTGCAGCAGCCACCTTGGGTCTGACAC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGCTGGAAGATTTTTCTaGATGACCAGGCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEAGRFF*MTRPAP
Trigger: GGGAGCCGGCCTGGTCATCCAGAAAAATCTTCCAGC...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGTTTGCTGAGGGCCCCTaGTGGCTGTGGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLEFAEGP*WLWRGC
Trigger: ACAGCCCCGCCACAGCCACCAGGGGCCCTCAGCAAA...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCCAGGCAGCATGTGCTaGGCTGGGATCACGATGCTG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPPGSMC*AGITML
Trigger: CAGCATCGTGATCCCAGCCCAGCACATGCTGCCTGG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGAGGGAGTTGTACGGCTaGGGTGCCTGGCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGRELYG*GAWQQE
Trigger: TTCTTGCTGCCAGGCACCCCAGCCGTACAACTCCCT...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGCTGTCCACCTGCGTGTaGTGCTGCAGCTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGLSTCV*CCSCED
Trigger: ATCCTCACAGCTGCAGCACCACACGCAGGTGGACAG...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGGGCCCAGACTCAGTaGGCCTGCCAGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPWAQTQ*ACQVLV
Trigger: AACCAGAACCTGGCAGGCCCACTGAGTCTGGGCCCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGAGACCCATAGGCAGTaGTGTGGTGACAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPETHRQ*CGDSRG
Trigger: CCCCCTGCTGTCACCACACCACTGCCTATGGGTCTC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGAGGCTGCTGTGCCTGTaGCTGTTGGAGACCCATAGG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGRLLCL*LLETHR
Trigger: CCTATGGGTCTCCAACAGCCACAGGCACAGCAGCCT...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATTGGCCTGAGGAGGGGTaGCCTGAGGCTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYWPEEG*PEAGWP
Trigger: CGGCCACCCAGCCTCAGGCCACCCCTCCTCAGGCCA...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCAGGACTATCTTCTCTaGGCTGGAAGCCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEQDYLL*AGSQAW
Trigger: CCAAGCCTGGCTTCCAGCCCAGAGAAGATAGTCCTG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCACAGGACTATCTTCTCTaGGCTGGAAGCCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAQDYLL*AGSQAW
Trigger: CCAAGCCTGGCTTCCAGCCCAGAGAAGATAGTCCTG...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTGGGCGTGGCCAGGGCTaGGTCTTGGGCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSGRGQG*VLGRRR
Trigger: CCGCCTCCTGCCCAAGACCCAGCCCTGGCCACGCCC...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGATGGAGGGCGTGAGTaGGGTCTTGAGGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLDGGRE*GLEGGR
Trigger: CCGCCCACCCTCAAGACCCCACTCACGCCCTCCATC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGAGGAGGGGGTGCCGTaGGCTCAGGGACCATGTGGA +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLEEGVP*AQGPCG
Trigger: TCCACATGGTCCCTGAGCCCACGGCACCCCCTCCTC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGATGTCTGTGGGGTGGTaGGAGTACCCCCAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEMSVGW*EYPQPY
Trigger: ATAAGGCTGGGGGTACTCCCACCACCCCACAGACAT...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGTGGTGGATGTCTGTaGGGTGGTGGGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGGGCL*GGGSTP
Trigger: GGGGGTACTCCCACCACCCCACAGACATCCACCACC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTGCAGGACAGAGCCCTaGTGTTTGTGCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRCRTEP*CLCRCS
Trigger: GGAGCATCTGCACAAACACCAGGGCTCTGTCCTGCA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGCTTTATGGTAGTCGTTaGGGGAGGGGAGGGCGCCTT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGLYGSR*GRGGRL
Trigger: AAGGCGCCCTCCCCTCCCCCAACGACTACCATAAAG...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCAGACGTTCCAGATGTaGAGGATGAAGACGACTGGC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGQTFQM*RMKTTG
Trigger: GCCAGTCGTCTTCATCCTCCACATCTGGAACGTCTG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGATTGTGACTAGAGGGTaGGAAGGCGTCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRIVTRG*EGVRPV
Trigger: CACAGGCCTGACGCCTTCCCACCCTCTAGTCACAAT...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGATCTGTTCAACGTCCTaGCACCGAGGCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGICSTS*HRGHHC
Trigger: ACAATGGTGGCCTCGGTGCCAGGACGTTGAACAGAT...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGCCAGGGTCTGTTCTGTaGTGTTGGCCTCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGPGSVL*CWPPED
Trigger: GTCTTCAGGAGGCCAACATCACAGAACAGACCCTGG...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGTGGTGCTGCAGCTGTaGGGATCTGGCCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLVVLQL*GSGLPR
Trigger: ACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCAC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATC +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGVVFSS*MNIRSI
Trigger: GATCGACCGAATGTTCATTCAGGAGGAGAAGACCAC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGCTGAAGGGTCACATTaGCCAGGCCCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLAEGSH*PGPQAA
Trigger: TGCAGCCTGTGGGCCTGGGCAATGTGACCCTTCAGC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCGGCTGTCCCGAGGGTaGCCCACTGGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGRLSRG*PTGCCS
Trigger: ACTGCAGCAGCCAGTGGGGCACCCTCGGGACAGCCG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGCTGCTGGGGCAAGGTaGCTGGTTCACCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLAAGAR*LVHPGW
Trigger: CCATCCAGGGTGAACCAGGCACCTTGCCCCAGCAGC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTAGGGGGCACCTGGGTTaGAGGCTGAACGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLRGHLG*RLNGQN
Trigger: GTTCTGGCCGTTCAGCCTGCAACCCAGGTGCCCCCT...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGGGACCTGTGGAGGCTaGTGTGCCTGTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLGTCGG*CACGCW
Trigger: CCAACAGCCACAGGCACAGCAGCCTCCACAGGTCCC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGAATCGTTCCAGAAGTaGTTTTGGCTGGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEESFQK*FWLGQR
Trigger: GCGTTGCCCCAGCCAAAAGCACTTCTGGAACGATTC...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGTGGGGGCAGGCTGGCTaGGCTCAGGGTTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLEWGQAG*AQGLGG
Trigger: ACCACCTAAACCCTGAGCCCAGCCAGCCTGCCCCCA...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCGGCACCAGGGCCTGGTaGGTCAGTACAGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSGTRAW*VSTVGG
Trigger: CCCGCCCACTGTACTGACCCACCAGGCCCTGGTGCC...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGCTGCAGGAAGGGCTaGACGCTCAAGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGCRKG*TLKALL
Trigger: CAACAAGGCCTTGAGCGTCCAGCCCTTCCTGCAGCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAATAAAAGTCAGGTTCTaGGGGGCCTTAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAIKVRF*GALGCW
Trigger: CCAGCAGCCTAAGGCCCCCCAGAACCTGACTTTTAT...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATCTGTGTGCCCCAGAGTaGGGTGCCAGCACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYLCAPE*GASTGP
Trigger: GGGCCCAGTGCTGGCACCCCACTCTGGGGCACACAG...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTTGGCTGTGGGGCCAGTaGGAGCCGGCTGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGWLWGQ*EPAGSE
Trigger: CTCAGAGCCAGCCGGCTCCCACTGGCCCCACAGCCA...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGTGTGCCTGTGGCTGTTaGAGACCCATAGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGCACGC*RPIGSG
Trigger: ACCACTGCCTATGGGTCTCCAACAGCCACAGGCACA...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTGGGTGGCCGCCTGTaGAGTAGGGACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSLGGRL*SRDLWR
Trigger: CCTCCACAGGTCCCTACTCCACAGGCGGCCACCCAG...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGCTGGCTCCTCTCCTaGGGCAGGAACATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPCWLLS*GRNICR
Trigger: CCTACAGATGTTCCTGCCCCAGGAGAGGAGCCAGCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGGTGGGCTCAGAGGGTaGGCAGGTCAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGGGLRG*AGQALG
Trigger: CCCCAGAGCCTGACCTGCCCACCCTCTGAGCCCACC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGGCTGGGGTGCTGGCTaGTGGTGGGGCGCCCAATTG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGGWGAG*WWGAQL
Trigger: CAATTGGGCGCCCCACCACCAGCCAGCACCCCAGCC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGCTGGGGTGCTGGCTaGTGGTGGGGCGCCCAATTG +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYGWGAG*WWGAQL
Trigger: CAATTGGGCGCCCCACCACCAGCCAGCACCCCAGCC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGGGCCCTCTGGAGGCTaGGATGGGGGTCGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGGPSGG*DGGRRG
Trigger: TCCTCTGCGACCCCCATCCCAGCCTCCAGAGGGCCC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGGCTCAGGGACCATGTaGAGGGCTGGTGGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLGSGTM*RAGGGV
Trigger: TACTCCGCCACCAGCCCTCCACATGGTCCCTGAGCC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTGGGTCCCCAGGGTGGTaGATGTCTGTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSGSPGW*MSVGWW
Trigger: CCACCACCCCACAGACATCCACCACCCTGGGGACCC...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTTATTGAGCATGGCCTaGGTGCGTTTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRLLSMA*VRLSSC
Trigger: GCAGCTGCTCAAACGCACCCAGGCCATGCTCAATAA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGAAGACGACTGGCCATaGCTGGGGAGCCGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYEDDWP*LGSRWP
Trigger: GGGCCACCGGCTCCCCAGCCATGGCCAGTCGTCTTC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGCTGGCCCACCACTTaGATAGGTGTCAGACCCAAG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGWPTT*IGVRPK
Trigger: CTTGGGTCTGACACCTATTCAAGTGGTGGGCCAGCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATGCTGCTGCCTTGATTaGGGAGGTGGACGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLCCCLD*GGGRSW
Trigger: CCATGAGCGTCCACCTCCTCAATCAAGGCAGCAGCA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAACGATGCTGCTGCCTTaGTTGAGGAGGTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLTMLLP*LRRWTL
Trigger: GAGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGT...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTTGCCCCACTGGCTGCTaGAGTGGCAGCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSCPTGC*SGSPCP
Trigger: GGGACAGGGGCTGCCACTGCAGCAGCCAGTGGGGCA...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATCCACCTGCGTGTGGTaGTGCAGCTGTGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLSTCVW*CSCEDL
Trigger: CAGATCCTCACAGCTGCAGCACCACACGCAGGTGGA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTGCCCCAGAGTGGGGTaGCAGCACTGGGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSCPRVG*QHWAQT
Trigger: AGTCTGGGCCCAGTGCTGGCACCCCACTCTGGGGCA...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGTTTCAGTGGAGCAGCTaGAGGGATCTGGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLEFQWSS*RDLGSR
Trigger: CCGGCTCCCCAGATCCCTGCAGCTGCTCCACTGAAA...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTGGTGGAGGAGGGGGTaGCGTGGGCTCAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSWWRRG*RGLRDH
Trigger: ATGGTCCCTGAGCCCACGGCACCCCCTCCTCCACCA...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGAGCCCTGGTGTTTGTaGAGATGCTCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPEPWCL*RCSRKQ
Trigger: CTGCTTCCTGGAGCATCTGCACAAACACCAGGGCTC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATCCAGTGCAGTGTTGTaGACCACCTTGCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLSSAVL*TTLLSP
Trigger: GGGGCTCAGCAAGGTGGTGCACAACACTGCACTGGA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATAAGGCGTCAGGCCTGTaGAGGGGCGCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYKASGL*RGAGDV
Trigger: CACATCCCCAGCGCCCCTGCACAGGCCTGACGCCTT...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGGTGGCACCAGGGCCTaGTGGGTCAGTACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGGGTRA*WVSTVG
Trigger: GCCCACTGTACTGACCCACCAGGCCCTGGTGCCACC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGCTTTGCCAAGAGCTaGGAGGTGGGTGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPCFAKS*EVGGLR
Trigger: TCTCAACCCACCCACCTCCCAGCTCTTGGCAAAGCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCACTGGCTGCTGCAGTaGCAGCCCCTGTCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGHWLLQ*QPLSRQ
Trigger: TTGCCGGGACAGGGGCTGCCACTGCAGCAGCCAGTG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTACCTGGCAGCAAGAACTaGTTCTGGCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLPGSKN*FWPGSM
Trigger: CATGCTGCCTGGCCAGAACCAGTTCTTGCTGCCAGG...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGCAGGCTGGCCCACCTaGATGGGAGCTGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYAGWPT*MGAAER
Trigger: CCTCTCTGCAGCTCCCATCCAGGTGGGCCAGCCTGC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCGGCCAGAACTGGTGTaGCCTCCCCAGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGRPELV*PPQWWQ
Trigger: CTGCCACCACTGGGGAGGCCACACCAGTTCTGGCCG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTAAGCCAGGCTTGGGCTaGCCTGAGGAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGKPGLG*PEEGWP
Trigger: AGGCCACCCCTCCTCAGGCCAGCCCAAGCCTGGCTT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCGGTGGGCTCAGAGGGTaGGCAGGTCAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTGGLRG*AGQALG
Trigger: CCCCAGAGCCTGACCTGCCCACCCTCTGAGCCCACC...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGACTTATGGGGTCCCTaGCTCGGTGGGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLDLWGP*LGGNWS
Trigger: ACTCCAGTTCCCACCGAGCCAGGGACCCCATAAGTC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTTGGATGTCTGTGGGGTaGTGGGAGTACCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLWMSVG*WEYPQP
Trigger: AGGCTGGGGGTACTCCCACCACCCCACAGACATCCA...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGATCACTAGCTTGGTaGGCAGATGAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLGSLAW*ADEEGA
Trigger: AGCCCCCTCCTCATCTGCCCACCAAGCTAGTGATCC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGCCATTCATCTGCGCCTaGGTAGCAGGAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLEPFICA*VAGGSG
Trigger: CCCACTCCCTCCTGCTACCCAGGCGCAGATGAATGG...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCATGCAAGAAATCATTaGGGGCCTGAGGATCACAAA +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGHARNH*GPEDHK
Trigger: TTTGTGATCCTCAGGCCCTCAATGATTTCTTGCATG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTAGGCAGTGCAGAGAGTaGCTGAGGGAGTTGTACGGC +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLRQCRE*LRELYG
Trigger: GCCGTACAACTCCCTCAGTCACTCTCTGCACTGCCT...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGCCAATTGATTCTGGATaGCAAAGATGCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGPIDSG*QRCQVE
Trigger: CTCTACCTGGCATCTTTGTCATCCAGAATCAATTGG...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCCGAGGCCACCATTGTaGCTAGAGGGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGPRPPL*LEGGKA
Trigger: CGCCTTCCCACCCTCTAGTCACAATGGTGGCCTCGG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGTCCACCTCCTCCTGCTaGAGGGGAGCCCAAGATATC +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLESTSSC*RGAQDI
Trigger: GATATCTTGGGCTCCCCTGCAGCAGGAGGAGGTGGA...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCCCTCCACCTCCTCCTaGTGCAGGGGAGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGPSTSS*CRGAQD
Trigger: ATCTTGGGCTCCCCTGCAGCAGGAGGAGGTGGAGGG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGAGTGTGGTGGTCACTaGGGCTGGAAGATTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGECGGH*GWKIFL
Trigger: CAGAAAAATCTTCCAGCCGCAGTGACCACCACACTC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTCGGCGGCACCAGGATTaGCCATGTTTTCTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLRRHQD*PCFLGR
Trigger: CCTACCGAGAAAACATGGGCAATCCTGGTGCCGCCG...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTGTCCGGCCGGGGGCCTaGTGCAGGTTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSVRPGA*CRLRML
Trigger: CAGCATCCTTAACCTGCAGCAGGCCCCCGGCCGGAC...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCCTGGGAAGAGAGCCTaGGGTCCTGCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGPGKRA*GPAVTA
Trigger: GGCAGTGACTGCAGGACCCCAGGCTCTCTTCCCAGG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCGGTGGGTCAGTACAGTaGGCGGGGCTTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTGGSVQ*AGLAAP
Trigger: TGGGGCTGCAAGCCCCGCCCACTGTACTGACCCACC...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGGTGTCAGACCCAAGGTaGCTGCTGCAGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLEVSDPR*LLQHSQ
Trigger: CTGGGAATGCTGCAGCAGCCACCTTGGGTCTGACAC...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTCACTGGCTGCTGCAGTaGCAGCCCCTGTCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSHWLLQ*QPLSRQ
Trigger: TTGCCGGGACAGGGGCTGCCACTGCAGCAGCCAGTG...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTACCCCGTGGTGGTGACTaGTGGCTGCTTGAACACATT +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLPRGGD*WLLEHI
Trigger: AATGTGTTCAAGCAGCCACCAGTCACCACCACGGGG...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCCAGGCAGCATGTGCTaGGCTGGGATCACGATGCTG +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSPGSMC*AGITML
Trigger: CAGCATCGTGATCCCAGCCCAGCACATGCTGCCTGG...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCGCAGCTGTGAGGATCTaGCCTCCCACGTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSAAVRI*PPTLAG
Trigger: GCCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGC...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCGAGACCCATAGGCAGTaGTGTGGTGACAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLETHRQ*CGDSRG
Trigger: CCCCCTGCTGTCACCACACCACTGCCTATGGGTCTC...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTGCTGGAAGCCAGGCTTaGGCTGGCCTGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSAGSQA*AGLRRG
Trigger: ACCCCTCCTCAGGCCAGCCCAAGCCTGGCTTCCAGC...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTAGAGTTGGGGGACCCTaGGGTGGAGGGCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSRVGGP*GGGQGC
Trigger: GCACCCTTGCCCTCCACCCCAGGGTCCCCCAACTCT...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCGGTGGGAACTGGAGTTaGAAGTCAGGGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLGGNWS*KSGGVG
Trigger: CCCCACACCCCCTGACTTCCAACTCCAGTTCCCACC...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGCTCAGGGACCATGTaGAGGGCTGGTGGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYGSGTM*RAGGGV
Trigger: TACTCCGCCACCAGCCCTCCACATGGTCCCTGAGCC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCGGGGCGGTTACCATCTaGAAGGTCCGAGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLGAVTI*KVRGGG
Trigger: TCCACCACCTCGGACCTTCCAGATGGTAACCGCCCC...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGGGTTGGAAGGTTGCTaGCAAAAGCTTTGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRGLEGC*QKLCFR
Trigger: CCGAAAACAAAGCTTTTGCCAGCAACCTTCCAACCC...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTTGCTGGGGGCTTCCCTaGCCCAGACACGGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSCWGLP*PRHGSF
Trigger: AAAGCTACCGTGTCTGGGCCAGGGAAGCCCCCAGCA...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCGCCGGATCACTAGCTTaGTGGGCAGATGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLAGSLA*WADEEG
Trigger: CCCCTCCTCATCTGCCCACCAAGCTAGTGATCCGGC...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATCTTCGTCTACCTTGGTaGGCAGTGGGGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYLRLPW*AVGWGC
Trigger: GCAGCCCCACCCCACTGCCCACCAAGGTAGACGAAG...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCGGCTGGCCCACCACTTaGATAGGTGTCAGACCCAAG +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLGWPTT*IGVRPK
Trigger: CTTGGGTCTGACACCTATTCAAGTGGTGGGCCAGCC...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCGGAGCCGGCAAGGGCTaGTGCACAGGATCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTGAGKG*CTGSSA
Trigger: TGCACTGGATCCTGTGCATCAGCCCTTGCCGGCTCC...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTGCTGTCATACTGAATTaGTGGGGGCTTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSAVILN*WGLPWP
Trigger: GGGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGC...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGGTGTTTGTGCAGATaGTCCAGGAAGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPWCLCR*SRKQAS
Trigger: AGAAGCCTGCTTCCTGGAGCATCTGCACAAACACCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGCAGGGTTTAGGTGGTTaGCGGCAGCTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLEQGLGG*RQLPAH
Trigger: ATGTGCAGGAAGCTGCCGCCAACCACCTAAACCCTG...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCTCCCAGGACTGCCATTaGGAAGGCCCTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTSQDCH*EGPGGL
Trigger: CAGGCCTCCAGGGCCTTCCCAATGGCAGTCCTGGGA...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCCTGGGGCAAGGTGCCTaGTTCACCCTGGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLLGQGA*FTLDGK
Trigger: CTTACCATCCAGGGTGAACCAGGCACCTTGCCCCAG...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCAGCATGTGCTGGGCTaGGATCACGATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGQHVLG*DHDAAA
Trigger: GGCAGCAGCATCGTGATCCCAGCCCAGCACATGCTG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTAGGGAGTTGTACGGCTaGGGTGCCTGGCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSRELYG*GAWQQE
Trigger: TTCTTGCTGCCAGGCACCCCAGCCGTACAACTCCCT...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATTGGGCCCAGACTCAGTaGGCCTGCCAGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYWAQTQ*ACQVLV
Trigger: AACCAGAACCTGGCAGGCCCACTGAGTCTGGGCCCA...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTTGTGCCTGTGGCTGTTaGAGACCCATAGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLCACGC*RPIGSG
Trigger: ACCACTGCCTATGGGTCTCCAACAGCCACAGGCACA...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGGGCAGTGGGCCCTCTaGAGGCTGGGATGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTGQWAL*RLGWGS
Trigger: CGACCCCCATCCCAGCCTCCAGAGGGCCCACTGCCC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGGTGGGAACTGGAGTTaGAAGTCAGGGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGGGNWS*KSGGVG
Trigger: CCCCACACCCCCTGACTTCCAACTCCAGTTCCCACC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGAGAATAATCCCAGATaGCACCTGGTGGAATCGTTC +
Preference number: 4 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGENNPR*HLVESF
Trigger: GAACGATTCCACCAGGTGCCATCTGGGATTATTCTC...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATTGGATGTCTGTGGGGTaGTGGGAGTACCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYWMSVG*WEYPQP
Trigger: AGGCTGGGGGTACTCCCACCACCCCACAGACATCCA...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGTCATACTGAATTGCTaGGGGCTTCCCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLVILNC*GLPWPR
Trigger: TCTGGGCCAGGGAAGCCCCCAGCAATTCAGTATGAC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGTGCAGGACAGAGCCCTaGTGTTTGTGCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: REDCLGEGRTTPCLVPLECRTEP*CLCRCS
Trigger: GGAGCATCTGCACAAACACCAGGGCTCTGTCCTGCA...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGCCCTCGGAAGACACTaGGACAGGGAAGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGALGRH*DREAKG
Trigger: TCCCTTGGCTTCCCTGTCCCAGTGTCTTCCGAGGGC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCACGACTGGCCATGGCTaGGGAGCCGGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTTTGHG*GAGGPR
Trigger: CCGAGGGCCACCGGCTCCCCAGCCATGGCCAGTCGT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTGGTTACGGGTGGGCATaGGGCCGTCCTCATCTGCGT +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSGYGWA*GRPHLR
Trigger: ACGCAGATGAGGACGGCCCCATGCCCACCCGTAACC...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCTAGAGAAGCTGGCCTaGTCCACGTCCGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGLEKLA*STSGDS
Trigger: TGAGTCCCCGGACGTGGACCAGGCCAGCTTCTCTAG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATAGGCCAGGTAGCCACTaGCAGGTACCTGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYRPGSH*QVPALP
Trigger: TGGCAAAGCAGGTACCTGTCAGTGGCTACCTGGCCT...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTAGTGCAGAGAGTGACTaGGGGAGTTGTACGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGSAESD*GSCTAG
Trigger: CCCAGCCGTACAACTCCCTCAGTCACTCTCTGCACT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATAGTGCAGAGAGTGACTaGGGGAGTTGTACGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYSAESD*GSCTAG
Trigger: CCCAGCCGTACAACTCCCTCAGTCACTCTCTGCACT...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGGAGCCGGCTGGCTCTaGGTAGGCAGGCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTGAGWL*VGRLPV
Trigger: CACTGGCAGCCTGCCTACTCAGAGCCAGCCGGCTCC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTTCCAGATGTGGAGGATaGAGACGACTGGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSSRCGG*RRLAMA
Trigger: AGCCATGGCCAGTCGTCTTCATCCTCCACATCTGGA...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTTCCACCTCCTCCTGCTaGAGGGGAGCCCAAGATATC +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGSTSSC*RGAQDI
Trigger: GATATCTTGGGCTCCCCTGCAGCAGGAGGAGGTGGA...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCCAGCATTCCCAGGACTaGCATTGGGAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSQHSQD*HWEGPG
Trigger: TCCAGGGCCTTCCCAATGGCAGTCCTGGGAATGCTG...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGTTGTACGGCTGGGGTaGCTGGCAGCAAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGVVRLG*LAARTG
Trigger: ACCAGTTCTTGCTGCCAGGCACCCCAGCCGTACAAC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCATCAGGGTTGGAAGGTTaGTGGCAAAAGCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAASGLEG*WQKLCF
Trigger: AAAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGA...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGCTTCTTTGCTGGGTTaGAGTAGGGGCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLASLLG*SRGCFF
Trigger: GAAGAAACAGCCCCTACTGCAACCCAGCAAAGAAGC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATTCCAGTGCAGTGTTGTaGACCACCTTGCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYSSAVL*TTLLSP
Trigger: GGGGCTCAGCAAGGTGGTGCACAACACTGCACTGGA...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTAGAGTGCCATTCATCTaGGCCTGGGTAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGRVPFI*AWVAGG
Trigger: CCCTCCTGCTACCCAGGCGCAGATGAATGGCACTCT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGATGGCACTCTGCAAATaGTCAGTAAGTGTATCATCC +
Preference number: 4 (lower is better)
Translates to: EVGGQAALLEVGLGALYEMALCK*SVSVSS
Trigger: GGATGATACACTTACTGAGCATTTGCAGAGTGCCAT...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGGCACCAGGGCCTGGTaGGTCAGTACAGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTGTRAW*VSTVGG
Trigger: CCCGCCCACTGTACTGACCCACCAGGCCCTGGTGCC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTTTGTTGACCACATCCTaGGGTGGCACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSLLTTS*GGTRAW
Trigger: CCAGGCCCTGGTGCCACCCCAGGATGTGGTCAACAA...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTGGCTGCAGGAAGGGCTaGACGCTCAAGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSGCRKG*TLKALL
Trigger: CAACAAGGCCTTGAGCGTCCAGCCCTTCCTGCAGCC...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTTGCTTTGCCAAGAGCTaGGAGGTGGGTGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSCFAKS*EVGGLR
Trigger: TCTCAACCCACCCACCTCCCAGCTCTTGGCAAAGCA...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCGCTGGCCCACCTGGATaGGAGCTGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTAGPPG*ELQRGC
Trigger: ACATCCTCTCTGCAGCTCCCATCCAGGTGGGCCAGC...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTAGGCTGCTGTGCCTGTaGCTGTTGGAGACCCATAGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGRLLCL*LLETHR
Trigger: CCTATGGGTCTCCAACAGCCACAGGCACAGCAGCCT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGGGCCCTCTGGAGGCTaGGATGGGGGTCGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTGPSGG*DGGRRG
Trigger: TCCTCTGCGACCCCCATCCCAGCCTCCAGAGGGCCC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTGGGTCCCTGGCTCGGTaGGAACTGGAGTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSGSLAR*ELELEV
Trigger: GACTTCCAACTCCAGTTCCCACCGAGCCAGGGACCC...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGAAGGTCCGAGGTGGTaGAGGAGGGGGTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTEGPRW*RRGCRG
Trigger: CCCACGGCACCCCCTCCTCCACCACCTCGGACCTTC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
3UTR CAA 72 bp AGTCCTAGGCAACACTCATGTATCCCCTGTCCTGGCTaGTGCCAGGGGGACGTTGTACCTTATAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SPRQHSCIPCPG*CQGDVVPYSPP
Trigger: AGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGGGATACATGAGTGTTGCCTAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTTCCAGATGTGGAGGATaGAGACGACTGGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGSRCGG*RRLAMA
Trigger: AGCCATGGCCAGTCGTCTTCATCCTCCACATCTGGA...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGTGTGCAGCGCTGTGTaGCCCAGAGTGGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTVCSAV*PRVGCQ
Trigger: CTGGCACCCCACTCTGGGGCACACAGCGCTGCACAC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCTGGTGGAGGAGGGGGTaGCGTGGGCTCAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTWWRRG*RGLRDH
Trigger: ATGGTCCCTGAGCCCACGGCACCCCCTCCTCCACCA...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCGAATCGTTCCAGAAGTaGTTTTGGCTGGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLESFQK*FWLGQR
Trigger: GCGTTGCCCCAGCCAAAAGCACTTCTGGAACGATTC...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCAGGGTTTAGGTGGTTaGCGGCAGCTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGQGLGG*RQLPAH
Trigger: ATGTGCAGGAAGCTGCCGCCAACCACCTAAACCCTG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGCTGGAAGATTTTTCTaGATGACCAGGCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYAGRFF*MTRPAP
Trigger: GGGAGCCGGCCTGGTCATCCAGAAAAATCTTCCAGC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTAGCAAGAACTGGTTCTaGCCAGGCAGCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGSKNWF*PGSMCW
Trigger: CCAGCACATGCTGCCTGGCCAGAACCAGTTCTTGCT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCCCTGGCAGCAAGAACTaGTTCTGGCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTPGSKN*FWPGSM
Trigger: CATGCTGCCTGGCCAGAACCAGTTCTTGCTGCCAGG...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGCAGGCTGGCCCACCTaGATGGGAGCTGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTAGWPT*MGAAER
Trigger: CCTCTCTGCAGCTCCCATCCAGGTGGGCCAGCCTGC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCTGCTGGCTCCTCTCCTaGGGCAGGAACATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTCWLLS*GRNICR
Trigger: CCTACAGATGTTCCTGCCCCAGGAGAGGAGCCAGCA...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCCATGTGGAGGGCTGGTaGCGGAGTAGGGGACTTATG +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTHVEGW*RSRGLM
Trigger: CATAAGTCCCCTACTCCGCCACCAGCCCTCCACATG...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGAGAATAATCCCAGATaGCACCTGGTGGAATCGTTC +
Preference number: 4 (lower is better)
Translates to: PVLACARGTLYLIAHLPLENNPR*HLVESF
Trigger: GAACGATTCCACCAGGTGCCATCTGGGATTATTCTC...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCGGCCACACTCAGGGTTaGAAGGTTGCTGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSGHTQG*KVAGKS
Trigger: GCTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCC...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTATAGGTCTTGATGGGTaGCCGGTTACGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGIGLDG*PVTGGH
Trigger: ATGCCCACCCGTAACCGGCCACCCATCAAGACCTAT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTATTGTGACTAGAGGGTaGGAAGGCGTCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGIVTRG*EGVRPV
Trigger: CACAGGCCTGACGCCTTCCCACCCTCTAGTCACAAT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCTCATCTGTTCAACGTCCTaGCACCGAGGCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: RMTPVSARMDGMQVPLSLICSTS*HRGHHC
Trigger: ACAATGGTGGCCTCGGTGCCAGGACGTTGAACAGAT...GAGAGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCCCAGGGTCTGTTCTGTaGTGTTGGCCTCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTPGSVL*CWPPED
Trigger: GTCTTCAGGAGGCCAACATCACAGAACAGACCCTGG...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTAAAGCCGATATTTATTaGGCATGGCCTGGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLKADIY*AWPGCV
Trigger: AACGCACCCAGGCCATGCTCAATAAATATCGGCTTT...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTATAAAAGTCAGGTTCTaGGGGGCCTTAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGIKVRF*GALGCW
Trigger: CCAGCAGCCTAAGGCCCCCCAGAACCTGACTTTTAT...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTTTATTGAGCATGGCCTaGGTGCGTTTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGLLSMA*VRLSSC
Trigger: GCAGCTGCTCAAACGCACCCAGGCCATGCTCAATAA...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATC +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGVVFSS*MNIRSI
Trigger: GATCGACCGAATGTTCATTCAGGAGGAGAAGACCAC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTGAGTGTGGTGGTCACTaGGGCTGGAAGATTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGECGGH*GWKIFL
Trigger: CAGAAAAATCTTCCAGCCGCAGTGACCACCACACTC...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCCAGCATGTGCTGGGCTaGGATCACGATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTQHVLG*DHDAAA
Trigger: GGCAGCAGCATCGTGATCCCAGCCCAGCACATGCTG...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGCCAGGGGCTTTCAGTaGAGCAGCTGCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTARGFQ*SSCRDL
Trigger: CAGATCCCTGCAGCTGCTCCACTGAAAGCCCCTGGC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGGTGCTGGCTGGTGGTaGGGCGCCCAATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTGAGWW*GAQLIL
Trigger: CAGAATCAATTGGGCGCCCCACCACCAGCCAGCACC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCCAGACGTTCCAGATGTaGAGGATGAAGACGACTGGC +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTQTFQM*RMKTTG
Trigger: GCCAGTCGTCTTCATCCTCCACATCTGGAACGTCTG...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCAGGCCTGAAATGGGCTaGAGGGTCACATTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTRPEMG*RVTLPR
Trigger: CCTGGGCAATGTGACCCTTCAGCCCATTTCAGGCCT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCAGGCAGTGCAGAGAGTaGCTGAGGGAGTTGTACGGC +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTRQCRE*LRELYG
Trigger: GCCGTACAACTCCCTCAGTCACTCTCTGCACTGCCT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCCTGGGGCAAGGTGCCTaGTTCACCCTGGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTLGQGA*FTLDGK
Trigger: CTTACCATCCAGGGTGAACCAGGCACCTTGCCCCAG...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCGGGTTGGAAGGTTGCTaGCAAAAGCTTTGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSGLEGC*QKLCFR
Trigger: CCGAAAACAAAGCTTTTGCCAGCAACCTTCCAACCC...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
3UTR CAA 72 bp TGGGATGTAGGTACTTTGGGACACTGGCTTGAGTCCTaGCTTCCTAATCTTTCAGGCTCTGTGGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: WDVGTLGHWLES*LPNLSGSVGNR
Trigger: CCTGTTGCCCACAGAGCCTGAAAGATTAGGAAGCAAGGACTCAAGCCAGTGTCCCAAAGTACCTACATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCCAATTGATTCTGGATaGCAAAGATGCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGPIDSG*QRCQVE
Trigger: CTCTACCTGGCATCTTTGTCATCCAGAATCAATTGG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGGAAGCAGGCTTCTTTaGTGGGTTGCAGTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTGSRLL*WVAVGA
Trigger: AGCCCCTACTGCAACCCAGCAAAGAAGCCTGCTTCC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCAGCAAGAACTGGTTCTaGCCAGGCAGCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTSKNWF*PGSMCW
Trigger: CCAGCACATGCTGCCTGGCCAGAACCAGTTCTTGCT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCATGTCTGTGGGGTGGTaGGAGTACCCCCAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTMSVGW*EYPQPY
Trigger: ATAAGGCTGGGGGTACTCCCACCACCCCACAGACAT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCATAGGTCTTGATGGGTaGCCGGTTACGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTIGLDG*PVTGGH
Trigger: ATGCCCACCCGTAACCGGCCACCCATCAAGACCTAT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCCATGCAAGAAATCATTaGGGGCCTGAGGATCACAAA +
Preference number: 4 (lower is better)
Translates to: THTQDDSGECTYGWDAGTHARNH*GPEDHK
Trigger: TTTGTGATCCTCAGGCCCTCAATGATTTCTTGCATG...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCATCTGTAGGGAATCCTaGGTGAGGATGGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTICRES*VRMAVV
Trigger: CACAACGGCCATCCTCACTCAGGATTCCCTACAGAT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATTCAGGGTTGGAAGGTTaGTGGCAAAAGCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLSRARTHTQDDSGECTYSGLEG*WQKLCF
Trigger: AAAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGA...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGCTTCTTTGCTGGGTTaGAGTAGGGGCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTASLLG*SRGCFF
Trigger: GAAGAAACAGCCCCTACTGCAACCCAGCAAAGAAGC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR TCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCAAAGCCGATATTTATTaGGCATGGCCTGGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTKADIY*AWPGCV
Trigger: AACGCACCCAGGCCATGCTCAATAAATATCGGCTTT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR GCA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCATGGCACTCTGCAAATaGTCAGTAAGTGTATCATCC +
Preference number: 4 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTMALCK*SVSVSS
Trigger: GGATGATACACTTACTGAGCATTTGCAGAGTGCCAT...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp GGGGGCGGTTACCATCTGGAAGGTCCGAGGTGGTGGAGGAGGGGGTaGCGTGGGCTCAGGGACCATGTGGAGGGCTGGTGGCGGAGTAGG +
Preference number: 5 (lower is better)
Translates to: GGGYHLEGPRWWRRG*RGLRDHVEGWWRSR
Trigger: CCTACTCCGCCACCAGCCCTCCACATGGTCCCTGAGCCCACGGCACCCCCTCCTCCACCACCTCGGACCTTCCAGATGGTAACCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GGGCAACGCTGGGAAGGGGGCGGTTACCATCTGGAAGGTCCGAGGTaGTGGAGGAGGGGGTGCCGTGGGCTCAGGGACCATGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GQRWEGGGYHLEGPR*WRRGCRGLRDHVEG
Trigger: GCCCTCCACATGGTCCCTGAGCCCACGGCACCCCCTCCTCCACCACCTCGGACCTTCCAGATGGTAACCGCCCCCTTCCCAGCGTTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCGTGAGTGGGGTCTaGAGGGTGGGCGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGGVSGV*RVGGKG
Trigger: CCCCTTCCCGCCCACCCTCAAGACCCCACTCACGCC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp ATGGTCCAGAGTGCCATTCATCTGCGCCTGGGTAGCAGGAGGGAGTaGGGGCGGAGCTGGGTGTGGCGGAGGCTCCGCCCCTTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: MVQSAIHLRLGSRRE*GRSWVWRRLRPFRW
Trigger: CCAGCGAAAGGGGCGGAGCCTCCGCCACACCCAGCTCCGCCCCCACTCCCTCCTGCTACCCAGGCGCAGATGAATGGCACTCTGGACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGGCGTGAGTGGGGTCTaGAGGGTGGGCGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAGVSGV*RVGGKG
Trigger: CCCCTTCCCGCCCACCCTCAAGACCCCACTCACGCC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp CCGCACCCCGCGGCCGTCCCTGTGCACCCTCGGCGGCACCAGGATTaGCCATGTTTTCTCGGTAGGTCTTGCGTAGTGGTAGACGTGGGC +
Preference number: 5 (lower is better)
Translates to: PHPAAVPVHPRRHQD*PCFLGRSCVVVDVG
Trigger: GCCCACGTCTACCACTACGCAAGACCTACCGAGAAAACATGGGCAATCCTGGTGCCGCCGAGGGTGCACAGGGACGGCCGCGGGGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GGCTGCAGGAAGGGCTGGACGCTCAAGGCCTTGTTGACCACATCCTaGGGTGGCACCAGGGCCTGGTGGGTCAGTACAGTGGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GCRKGWTLKALLTTS*GGTRAWWVSTVGGA
Trigger: AGCCCCGCCCACTGTACTGACCCACCAGGCCCTGGTGCCACCCCAGGATGTGGTCAACAAGGCCTTGAGCGTCCAGCCCTTCCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp CAGCAGGGGGCACCTGGGTTGCAGGCTGAACGGCCAGAACTGGTGTaGCCTCCCCAGTGGTGGCAGCTGGAGTGGAGGGTTGCACTAGCC +
Preference number: 5 (lower is better)
Translates to: QQGAPGLQAERPELV*PPQWWQLEWRVALA
Trigger: GGCTAGTGCAACCCTCCACTCCAGCTGCCACCACTGGGGAGGCCACACCAGTTCTGGCCGTTCAGCCTGCAACCCAGGTGCCCCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp TGCTTCCCAACTGGGTTCAGTGGGGCCCTGGCTGGTAGCGGAGGCTaGAGTCTCCGGGGGTGGTGGGCCGCCCTTCAGAACCCGCTGATA +
Preference number: 5 (lower is better)
Translates to: CFPTGFSGALAGSGG*SLRGWWAALQNPLI
Trigger: TATCAGCGGGTTCTGAAGGGCGGCCCACCACCCCCGGAGACTCCAGCCTCCGCTACCAGCCAGGGCCCCACTGAACCCAGTTGGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTACAGTGGGCGGGGCTaGCAGCCCCAGCAGATCCGC +
Preference number: 5 (lower is better)
Translates to: EVGGQAALLEVGLGALYEYSGRG*QPQQIR
Trigger: GCGGATCTGCTGGGGCTGCAAGCCCCGCCCACTGTA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 90 bp GGCGGAGGCTCCGCCCCTTTCGCTGGGGTTGGAGCCGGCAAGGGCTaGTGCACAGGATCCAGTGCAGTGTTGTGCACCACCTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GGGSAPFAGVGAGKG*CTGSSAVLCTTLLS
Trigger: GCTCAGCAAGGTGGTGCACAACACTGCACTGGATCCTGTGCATCAGCCCTTGCCGGCTCCAACCCCAGCGAAAGGGGCGGAGCCTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 90 bp GAGGCTGGAGTCTCCGGGGGTGGTGGGCCGCCCTTCAGAACCCGCTaGTATAGTTCATCCTCCACCGCTGCCAGCTCCCGGATCAGCCCA +
Preference number: 5 (lower is better)
Translates to: EAGVSGGGGPPFRTR*YSSSSTAASSRISP
Trigger: TGGGCTGATCCGGGAGCTGGCAGCGGTGGAGGATGAACTATATCAGCGGGTTCTGAAGGGCGGCCCACCACCCCCGGAGACTCCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GGAGGGGGCTGGGCAGACGTTCCAGATGTGGAGGATGAAGACGACTaGCCATGGCTGGGGAGCCGGTGGCCCTCGGAAGACACTGGGACA +
Preference number: 5 (lower is better)
Translates to: GGGWADVPDVEDEDD*PWLGSRWPSEDTGT
Trigger: TGTCCCAGTGTCTTCCGAGGGCCACCGGCTCCCCAGCCATGGCCAGTCGTCTTCATCCTCCACATCTGGAACGTCTGCCCAGCCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGTGGCTTCGTCTACCTaGGTGGGCAGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAVASST*VGSGVG
Trigger: CCCCACCCCACTGCCCACCAAGGTAGACGAAGCCAC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 90 bp ATAGGCAGTGGTGTGGTGACAGCAGGGGGCACCTGGGTTGCAGGCTaGACGGCCAGAACTGGTGTGGCCTCCCCAGTGGTGGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: IGSGVVTAGGTWVAG*TARTGVASPVVAAG
Trigger: TCCAGCTGCCACCACTGGGGAGGCCACACCAGTTCTGGCCGTTCAGCCTGCAACCCAGGTGCCCCCTGCTGTCACCACACCACTGCCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp AGCTGCAGAGAGGATGTGTGCAGCGCTGTGTGCCCCAGAGTGGGGTaGCAGCACTGGGCCCAGACTCAGTGGGCCTGCCAGGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SCREDVCSAVCPRVG*QHWAQTQWACQVLV
Trigger: AACCAGAACCTGGCAGGCCCACTGAGTCTGGGCCCAGTGCTGGCACCCCACTCTGGGGCACACAGCGCTGCACACATCCTCTCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp AGGCTGGGTGGCCGCCTGTGGAGTAGGGACCTGTGGAGGCTGCTGTaGCTGTGGCTGTTGGAGACCCATAGGCAGTGGTGTGGTGACAGC +
Preference number: 5 (lower is better)
Translates to: RLGGRLWSRDLWRLL*LWLLETHRQWCGDS
Trigger: GCTGTCACCACACCACTGCCTATGGGTCTCCAACAGCCACAGGCACAGCAGCCTCCACAGGTCCCTACTCCACAGGCGGCCACCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GTGGCCAGTGACACAGGCATCTGGAAGAGGGCAGGCTGGCCCACCTaGATGGGAGCTGCAGAGAGGATGTGTGCAGCGCTGTGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: VASDTGIWKRAGWPT*MGAAERMCAALCAP
Trigger: TGGGGCACACAGCGCTGCACACATCCTCTCTGCAGCTCCCATCCAGGTGGGCCAGCCTGCCCTCTTCCAGATGCCTGTGTCACTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp CCTGGGTTGCAGGCTGAACGGCCAGAACTGGTGTGGCCTCCCCAGTaGTGGCAGCTGGAGTGGAGGGTTGCACTAGCCCATCAGGCGTGT +
Preference number: 5 (lower is better)
Translates to: PGLQAERPELVWPPQ*WQLEWRVALAHQAC
Trigger: ACACGCCTGATGGGCTAGTGCAACCCTCCACTCCAGCTGCCACCACTGGGGAGGCCACACCAGTTCTGGCCGTTCAGCCTGCAACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp CTGTGGAGGCTGCTGTGCCTGTGGCTGTTGGAGACCCATAGGCAGTaGTGTGGTGACAGCAGGGGGCACCTGGGTTGCAGGCTGAACGGC +
Preference number: 5 (lower is better)
Translates to: LWRLLCLWLLETHRQ*CGDSRGHLGCRLNG
Trigger: GCCGTTCAGCCTGCAACCCAGGTGCCCCCTGCTGTCACCACACCACTGCCTATGGGTCTCCAACAGCCACAGGCACAGCAGCCTCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GGCTCAGGGACCATGTGGAGGGCTGGTGGCGGAGTAGGGGACTTATaGGGTCCCTGGCTCGGTGGGAACTGGAGTTGGAAGTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: GSGTMWRAGGGVGDL*GPWLGGNWSWKSGG
Trigger: ACCCCCTGACTTCCAACTCCAGTTCCCACCGAGCCAGGGACCCCATAAGTCCCCTACTCCGCCACCAGCCCTCCACATGGTCCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp AGAGGAGGGAGGCCTGTGGTGGCCATAGGTGTGGAGGCTGGGACATaGCTAGAGGCGGCAGGAGTCCCAGGTGGTGCCTGTCCACTGACT +
Preference number: 5 (lower is better)
Translates to: RGGRPVVAIGVEAGT*LEAAGVPGGACPLT
Trigger: AGTCAGTGGACAGGCACCACCTGGGACTCCTGCCGCCTCTAGCCATGTCCCAGCCTCCACACCTATGGCCACCACAGGCCTCCCTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp AGACGACTGGCCATGGCTGGGGAGCCGGTGGCCCTCGGAAGACACTaGGACAGGGAAGCCAAGGGAGCGGGAGGAAGACACGTACTCATC +
Preference number: 5 (lower is better)
Translates to: RRLAMAGEPVALGRH*DREAKGAGGRHVLI
Trigger: GATGAGTACGTGTCTTCCTCCCGCTCCCTTGGCTTCCCTGTCCCAGTGTCTTCCGAGGGCCACCGGCTCCCCAGCCATGGCCAGTCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGTGTTGTGCACCACCTaGCTGAGCCCCGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGVLCTT*LSPASC
Trigger: ACAAGAGGCGGGGCTCAGCAAGGTGGTGCACAACAC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GAGTTTGAGACCAATGCGGCTCCGGGCCTCATAGGTCTTGATGGGTaGCCGGTTACGGGTGGGCATGGGGCCGTCCTCATCTGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: EFETNAAPGLIGLDG*PVTGGHGAVLICVQ
Trigger: CTGGACGCAGATGAGGACGGCCCCATGCCCACCCGTAACCGGCCACCCATCAAGACCTATGAGGCCCGGAGCCGCATTGGTCTCAAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGTCAGGGTTTAGGTGGTaGGCGGCAGCTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGSGFRW*AAASCT
Trigger: TGTGCAGGAAGCTGCCGCCAACCACCTAAACCCTGA...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGTGGACGCTCAAGGCCTaGTTGACCACATCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGWTLKA*LTTSWG
Trigger: ACCCCAGGATGTGGTCAACAAGGCCTTGAGCGTCCA...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGGGAGGTGGGTGGGTaGAGAGCCATGACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPWEVGG*RAMTGW
Trigger: CCAGCCCGTCATGGCTCTCAACCCACCCACCTCCCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTTGGACGCTCATGGGTTaGCTGAGGGCCCCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPWTLMG*LRAPGG
Trigger: GCCACCAGGGGCCCTCAGCAAACCCATGAGCGTCCA...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCACTGTGCCTGTGGCTGTaGGAGACCCATAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAALCLWL*ETHRQW
Trigger: CCACTGCCTATGGGTCTCCAACAGCCACAGGCACAG...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp CCCTGTCCCGGCAAACACCGAGTTCCCGTTGAGTGTGGTGGTCACTaGGGCTGGAAGATTTTTCTGGATGACCAGGCCGGCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PCPGKHRVPVECGGH*GWKIFLDDQAGSLG
Trigger: CCCCAGGGAGCCGGCCTGGTCATCCAGAAAAATCTTCCAGCCGCAGTGACCACCACACTCAACGGGAACTCGGTGTTTGCCGGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp GCTGTCCCCGTGGTGGTGACTGGTGGCTGCTTGAACACATTCGCCTaGAAAGCCGGTGCCGGGAAGCCAGACAGCACCACATTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: AVPVVVTGGCLNTFA*KAGAGKPDSTTFWP
Trigger: TGGCCAGAATGTGGTGCTGTCTGGCTTCCCGGCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACCACGGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp CACCCTCGGCGGCACCAGGATTGCCCATGTTTTCTCGGTAGGTCTTaGGTAGTGGTAGACGTGGGCAGGACGCAGGCACCGTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: HPRRHQDCPCFLGRS*VVVDVGRTQAPWVC
Trigger: GCAAACCCACGGTGCCTGCGTCCTGCCCACGTCTACCACTACGCAAGACCTACCGAGAAAACATGGGCAATCCTGGTGCCGCCGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp CAGGGGAGCCCAAGATATCATCTTCTAGGAAGTCCAGGTCCACGCTaGGGGCAGGCTGGCTGGGCTCAGGGTTTAGGTGGTTGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: QGSPRYHLLGSPGPR*GQAGWAQGLGGWRQ
Trigger: CTGCCGCCAACCACCTAAACCCTGAGCCCAGCCAGCCTGCCCCCAGCGTGGACCTGGACTTCCTAGAAGATGATATCTTGGGCTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GTCACTGCGGCTGGAAGATTTTTCTGGATGACCAGGCCGGCTCCCTaGGGGGACACGCCGGCAGATGCCAGTGTCACTGGCTCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: VTAAGRFFWMTRPAP*GDTPADASVTGSEG
Trigger: TCCTTCAGAGCCAGTGACACTGGCATCTGCCGGCGTGTCCCCCCAGGGAGCCGGCCTGGTCATCCAGAAAAATCTTCCAGCCGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GGTAGGTCTTGCGTAGTGGTAGACGTGGGCAGGACGCAGGCACCGTaGGTTTGCGTACTGCGGGTGGGGGATGGTCCAGAGTGCCATTCA +
Preference number: 5 (lower is better)
Translates to: GRSCVVVDVGRTQAP*VCVLRVGDGPECHS
Trigger: TGAATGGCACTCTGGACCATCCCCCACCCGCAGTACGCAAACCCACGGTGCCTGCGTCCTGCCCACGTCTACCACTACGCAAGACCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGCCTGCCAGGTTCTGGTaGGTGAGGATAGGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: EVGGQAALLEVGLGALYEPARFW*VRIGLA
Trigger: TGCCAACCCTATCCTCACCAACCAGAACCTGGCAGG...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTCGGTGGGAACTGGAGTaGGAAGTCAGGGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPRWELE*EVRGCG
Trigger: CCCACACCCCCTGACTTCCAACTCCAGTTCCCACCG...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCATGCTGTCATACTGAATaGCTGGGGGCTTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAACCHTE*LGASLA
Trigger: GGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGCA...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAATGGCCTGGGTGCGTTaGAGCAGCTGCGTAGAGACA +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAMAWVR*SSCVET
Trigger: TGTCTCTACGCAGCTGCTCAAACGCACCCAGGCCAT...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 90 bp GTGAGGATCTGGCCTCCCACGTTGGCAGGCAGTGCAGAGAGTGACTaGGGGAGTTGTACGGCTGGGGTGCCTGGCAGCAAGAACTGGTTC +
Preference number: 5 (lower is better)
Translates to: VRIWPPTLAGSAESD*GSCTAGVPGSKNWF
Trigger: GAACCAGTTCTTGCTGCCAGGCACCCCAGCCGTACAACTCCCTCAGTCACTCTCTGCACTGCCTGCCAACGTGGGAGGCCAGATCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp GGTGGTGACTGGTGGCTGCTTGAACACATTCGCCTGCAAAGCCGGTaGCGGGAAGCCAGACAGCACCACATTCTGGCCAGCTTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: GGDWWLLEHIRLQSR*REARQHHILASFAR
Trigger: ACGGGCAAAGCTGGCCAGAATGTGGTGCTGTCTGGCTTCCCGGCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp GGTGAGGATAGGGTTGGCAATGAGCTGTCCACCTGCGTGTGGTGCTaGAGCTGTGAGGATCTGGCCTCCCACGTTGGCAGGCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: GEDRVGNELSTCVWC*SCEDLASHVGRQCR
Trigger: TCTGCACTGCCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATCCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp GTTGGTGAGGATAGGGTTGGCAATGAGCTGTCCACCTGCGTGTGGTaGTGCAGCTGTGAGGATCTGGCCTCCCACGTTGGCAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: VGEDRVGNELSTCVW*CSCEDLASHVGRQC
Trigger: GCACTGCCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATCCTCACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp AGAACTGGTGTGGCCTCCCCAGTGGTGGCAGCTGGAGTGGAGGGTTaGACTAGCCCATCAGGCGTGTTAAGCATGGCCACAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: RTGVASPVVAAGVEG*TSPSGVLSMATALG
Trigger: TCCCAGTGCTGTGGCCATGCTTAACACGCCTGATGGGCTAGTGCAACCCTCCACTCCAGCTGCCACCACTGGGGAGGCCACACCAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp CTGGTTGGTGAGGATAGGGTTGGCAATGAGCTGTCCACCTGCGTGTaGTGCTGCAGCTGTGAGGATCTGGCCTCCCACGTTGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LVGEDRVGNELSTCV*CCSCEDLASHVGRQ
Trigger: CTGCCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATCCTCACCAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATTCCCAGGACTGCCATaGGGAAGGCCCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PVLACARGTLYLIAHLPLFPGLP*GRPWRP
Trigger: AGGCCTCCAGGGCCTTCCCAATGGCAGTCCTGGGAA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGTGACTGGTGGCTGCTaGAACACATTCGCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGVTGGC*NTFACK
Trigger: TTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCAC...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGCACGATGCTGCTGCCTaGATTGAGGAGGTGGACGCT +
Preference number: 5 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGHDAAA*IEEVDA
Trigger: AGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGTG...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGTGGCCACACTCAGGGTaGGAAGGTTGCTGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: EVGGQAALLEVGLGALYEWPHSG*EGCWQK
Trigger: CTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCCA...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCATGGCCACACTCAGGGTaGGAAGGTTGCTGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAWPHSG*EGCWQK
Trigger: CTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCCA...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGGAGGGGAGGGCGCCTaGGTAGACATGGTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLGGEGA*VDMVGQ
Trigger: CTGCCCTACCATGTCTACCAAGGCGCCCTCCCCTCC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGATGGCCTGGGTGCGTTaGAGCAGCTGCGTAGAGACA +
Preference number: 5 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGMAWVR*SSCVET
Trigger: TGTCTCTACGCAGCTGCTCAAACGCACCCAGGCCAT...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp CAGGTTCTGGTTGGTGAGGATAGGGTTGGCAATGAGCTGTCCACCTaGGTGTGGTGCTGCAGCTGTGAGGATCTGGCCTCCCACGTTGGC +
Preference number: 5 (lower is better)
Translates to: QVLVGEDRVGNELST*VWCCSCEDLASHVG
Trigger: GCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATCCTCACCAACCAGAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp TATCATCTTCTAGGAAGTCCAGGTCCACGCTGGGGGCAGGCTGGCTaGGCTCAGGGTTTAGGTGGTTGGCGGCAGCTTCCTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: YHLLGSPGPRWGQAG*AQGLGGWRQLPAHG
Trigger: TCCATGTGCAGGAAGCTGCCGCCAACCACCTAAACCCTGAGCCCAGCCAGCCTGCCCCCAGCGTGGACCTGGACTTCCTAGAAGATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp GCCTGGCAGCAAGAACTGGTTCTGGCCAGGCAGCATGTGCTGGGCTaGGATCACGATGCTGCTGCCTTGATTGAGGAGGTGGACGCTCAT +
Preference number: 5 (lower is better)
Translates to: AWQQELVLARQHVLG*DHDAAALIEEVDAH
Trigger: ATGAGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGTGATCCCAGCCCAGCACATGCTGCCTGGCCAGAACCAGTTCTTGCTGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp AGAGGCAGTAGGACCGGTGAGGGTCCCCAGGGTGGTGGATGTCTGTaGGGTGGTGGGAGTACCCCCAGCCTTATTCTGGAGAATAATCCC +
Preference number: 5 (lower is better)
Translates to: RGSRTGEGPQGGGCL*GGGSTPSLILENNP
Trigger: GGGATTATTCTCCAGAATAAGGCTGGGGGTACTCCCACCACCCCACAGACATCCACCACCCTGGGGACCCTCACCGGTCCTACTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGGGCTGGCCCACCACTaGAATAGGTGTCAGACCCAA +
Preference number: 5 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPGLAHH*NRCQTQ
Trigger: TTGGGTCTGACACCTATTCAAGTGGTGGGCCAGCCC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGTGACTGGTGGCTGCTaGAACACATTCGCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAVTGGC*NTFACK
Trigger: TTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCAC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGTTGGTGAGGATAGGGTaGGCAATGAGCTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRLVRIG*AMSCPP
Trigger: AGGTGGACAGCTCATTGCCAACCCTATCCTCACCAA...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTACTGTGCCTGTGGCTGTaGGAGACCCATAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PVLACARGTLYLIAHLPLLCLWL*ETHRQW
Trigger: CCACTGCCTATGGGTCTCCAACAGCCACAGGCACAG...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTAGGAAGCAGGCTTCTTaGCTGGGTTGCAGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPRKQAS*LGCSRG
Trigger: GCCCCTACTGCAACCCAGCAAAGAAGCCTGCTTCCT...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGTGTTTGATCTTGAGTTaGAGACCAATGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: PLRGGGRRSGCSPGSGVGCLILS*RPMRLR
Trigger: CCGGAGCCGCATTGGTCTCAAACTCAAGATCAAACA...CCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCAGCTGAGCCCCGCCTCTaGTTTGATCTTGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAAEPRL*FDLEFE
Trigger: CTCAAACTCAAGATCAAACAAGAGGCGGGGCTCAGC...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTGGATCCAGTGCAGTGTaGTGCACCACCTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PCPGLCQGDVVPYSPPSPGSSAV*CTTLLS
Trigger: GCTCAGCAAGGTGGTGCACAACACTGCACTGGATCC...AGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp TTTCGCTGGGGTTGGAGCCGGCAAGGGCTGATGCACAGGATCCAGTaGAGTGTTGTGCACCACCTTGCTGAGCCCCGCCTCTTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: FRWGWSRQGLMHRIQ*SVVHHLAEPRLLFD
Trigger: ATCAAACAAGAGGCGGGGCTCAGCAAGGTGGTGCACAACACTGCACTGGATCCTGTGCATCAGCCCTTGCCGGCTCCAACCCCAGCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp TCAGTAAGTGTATCATCCTGCGGGCTGTCACTAGAGAAGCTGGCCTaGTCCACGTCCGGGGACTCAGACTTGCGTCGTTTGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: SVSVSSCGLSLEKLA*STSGDSDLRRLAGG
Trigger: ACCCCCAGCCAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGGCCAGCTTCTCTAGTGACAGCCCGCAGGATGATACACTTACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCTGTCCTGGCTTGTGCCAGGGGGACGTTGTACCTTATAGCCCACCTTCCCCTATGGACGCTCAAGGCCTaGTTGACCACATCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PVLACARGTLYLIAHLPLWTLKA*LTTSWG
Trigger: ACCCCAGGATGTGGTCAACAAGGCCTTGAGCGTCCA...TAGGGGAAGGTGGGCTATAAGGTACAACGTCCCCCTGGCACAAGCCAGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTTGGGAGGTGGGTGGGTaGAGAGCCATGACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGWEVGG*RAMTGW
Trigger: CCAGCCCGTCATGGCTCTCAACCCACCCACCTCCCA...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCATGGTGGGGCGCCCAATaGATTCTGGATGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAAWWGAQ*ILDDKD
Trigger: ATCTTTGTCATCCAGAATCAATTGGGCGCCCCACCA...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTCGGTGGGAACTGGAGTaGGAAGTCAGGGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSRWELE*EVRGCG
Trigger: CCCACACCCCCTGACTTCCAACTCCAGTTCCCACCG...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGAGGGGAGGGCGCCTaGGTAGACATGGTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SLSRARTHTQDDSGECTYGGEGA*VDMVGQ
Trigger: CTGCCCTACCATGTCTACCAAGGCGCCCTCCCCTCC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGGCTGCATGTTTGATCTTGAGTTaGAGACCAATGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: AVRLLSWKWGWGHSMRAACLILS*RPMRLR
Trigger: CCGGAGCCGCATTGGTCTCAAACTCAAGATCAAACA...TGCAGCCCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTGTGTTGTGCACCACCTaGCTGAGCCCCGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLVLCTT*LSPASC
Trigger: ACAAGAGGCGGGGCTCAGCAAGGTGGTGCACAACAC...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 90 bp CGGCCGGGGGCCTGCTGCAGGTTAAGGATGCTGTCGATGGCACTCTaGAAATGCTCAGTAAGTGTATCATCCTGCGGGCTGTCACTAGAG +
Preference number: 5 (lower is better)
Translates to: RPGACCRLRMLSMAL*KCSVSVSSCGLSLE
Trigger: CTCTAGTGACAGCCCGCAGGATGATACACTTACTGAGCATTTGCAGAGTGCCATCGACAGCATCCTTAACCTGCAGCAGGCCCCCGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp AGAATACAGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTTCCCAGGACTGCCATaGGGAAGGCCCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RIQGRLLGRRKDDPVSCSFPGLP*GRPWRP
Trigger: AGGCCTCCAGGGCCTTCCCAATGGCAGTCCTGGGAA...GGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCTGTATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCTGGACGCTCATGGGTTaGCTGAGGGCCCCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: THTQDDSGECTYGWDAGTWTLMG*LRAPGG
Trigger: GCCACCAGGGGCCCTCAGCAAACCCATGAGCGTCCA...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTCACGATGCTGCTGCCTaGATTGAGGAGGTGGACGCT +
Preference number: 5 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLHDAAA*IEEVDA
Trigger: AGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGTG...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp AGGGAAGACTGCTTGGGAGAAGGAAGGACGACCCCGTGTCTTGTTCCTCTGGAGAGGAAGCAGGCTTCTTaGCTGGGTTGCAGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: REDCLGEGRTTPCLVPLERKQAS*LGCSRG
Trigger: GCCCCTACTGCAACCCAGCAAAGAAGCCTGCTTCCT...CTCCAGAGGAACAAGACACGGGGTCGTCCTTCCTTCTCCCAAGCAGTCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp AGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGAAAAGCCGATATTTATaGAGCATGGCCTGGGTGCGT +
Preference number: 5 (lower is better)
Translates to: RSAVRLLSWKWGWGHSMRKSRYL*SMAWVR
Trigger: ACGCACCCAGGCCATGCTCAATAAATATCGGCTTTT...CCTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGGTTGGGGGCACTCTATGAGGCCTCTTGTTTGATCTaGAGTTTGAGACCAATGCGG +
Preference number: 5 (lower is better)
Translates to: EVGGQAALLEVGLGALYEASCLI*SLRPMR
Trigger: CCGCATTGGTCTCAAACTCAAGATCAAACAAGAGGC...CTCATAGAGTGCCCCCAACCCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTTTCATAGAAGGCACTTaGGGCCTCCACAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLFIEGT*GLHRGI
Trigger: GATGCCCCTGTGGAGGCCCAAAGTGCCTTCTATGAA...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTTGCTGTCATACTGAATaGCTGGGGGCTTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSCCHTE*LGASLA
Trigger: GGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGCA...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACGCCCCATTCCAAATCTCTAGCCAACGTGGAAGCAGGAAGGTGGGGAGGCCTTACAGAGCCCTGGTGTTaGTGCAGATGCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TPHSKSLANVEAGRWGGLTEPWC*CRCSRK
Trigger: CTTCCTGGAGCATCTGCACAAACACCAGGGCTCTGT...AAGGCCTCCCCACCTTCCTGCTTCCACGTTGGCTAGAGATTTGGAATGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp TTAGTGCCCCTTAGAGGTGGAGGTCGGCGGTCAGGCTGCTCTCCTGGAAGTGGGAAAAGCCGATATTTATaGAGCATGGCCTGGGTGCGT +
Preference number: 5 (lower is better)
Translates to: LVPLRGGGRRSGCSPGSGKSRYL*SMAWVR
Trigger: ACGCACCCAGGCCATGCTCAATAAATATCGGCTTTT...CCCACTTCCAGGAGAGCAGCCTGACCGCCGACCTCCACCTCTAAGGGGCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGGCTGGCCCACCACTaGAATAGGTGTCAGACCCAA +
Preference number: 5 (lower is better)
Translates to: SLSRARTHTQDDSGECTYGLAHH*NRCQTQ
Trigger: TTGGGTCTGACACCTATTCAAGTGGTGGGCCAGCCC...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS CCA 90 bp GTGGTGGATGTCTGTGGGGTGGTGGGAGTACCCCCAGCCTTATTCTaGAGAATAATCCCAGATGGCACCTGGTGGAATCGTTCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: VVDVCGVVGVPPALF*RIIPDGTWWNRSRS
Trigger: ACTTCTGGAACGATTCCACCAGGTGCCATCTGGGATTATTCTCCAGAATAAGGCTGGGGGTACTCCCACCACCCCACAGACATCCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 90 bp CAAGCTACACAACTTGCTGTCATACTGAATTGCTGGGGGCTTCCCTaGCCCAGACACGGTAGCTTTGGCCACACTCAGGGTTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: QATQLAVILNCWGLP*PRHGSFGHTQGWKV
Trigger: AACCTTCCAACCCTGAGTGTGGCCAAAGCTACCGTGTCTGGGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGCAAGTTGTGTAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCTCAGGGTTTAGGTGGTaGGCGGCAGCTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: THTQDDSGECTYGWDAGTSGFRW*AAASCT
Trigger: TGTGCAGGAAGCTGCCGCCAACCACCTAAACCCTGA...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTTTGGTGAGGATAGGGTaGGCAATGAGCTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSLVRIG*AMSCPP
Trigger: AGGTGGACAGCTCATTGCCAACCCTATCCTCACCAA...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp TCTCTCTCTCGTGCACGCACACATACACAGGATGACTCCGGTGAGTGCACGTATACAGAGCCCTGGTGTTaGTGCAGATGCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SLSRARTHTQDDSGECTYTEPWC*CRCSRK
Trigger: CTTCCTGGAGCATCTGCACAAACACCAGGGCTCTGT...ATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCGTGCACGAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTGCTGAGCCCCGCCTCTaGTTTGATCTTGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSAEPRL*FDLEFE
Trigger: CTCAAACTCAAGATCAAACAAGAGGCGGGGCTCAGC...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCGTGGCTTCGTCTACCTaGGTGGGCAGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTVASST*VGSGVG
Trigger: CCCCACCCCACTGCCCACCAAGGTAGACGAAGCCAC...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTTTCATAGAAGGCACTTaGGGCCTCCACAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSFIEGT*GLHRGI
Trigger: GATGCCCCTGTGGAGGCCCAAAGTGCCTTCTATGAA...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGCAGGTACCTCTCTCTTGGTGGGGCGCCCAATaGATTCTGGATGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: HRMTPVSARMDGMQVPLSWWGAQ*ILDDKD
Trigger: ATCTTTGTCATCCAGAATCAATTGGGCGCCCCACCA...AGAGAGAGGTACCTGCATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS TCA 90 bp TCCTTGGCAAGCTGCTTATCCAAGGCAAGGGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATCATAACCATCTCCGCAGAAGGACTG +
Preference number: 5 (lower is better)
Translates to: SLASCLSKARVVFSS*MNIRSIITISAEGL
Trigger: CAGTCCTTCTGCGGAGATGGTTATGATCGACCGAATGTTCATTCAGGAGGAGAAGACCACCCTTGCCTTGGATAAGCAGCTTGCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CCACGAAGCCAATCAGACAAGACCTTGTTTTCAGATGTTACCAGTGCATCAACCCCTGCCAGGTTCTGGTaGGTGAGGATAGGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PRSQSDKTLFSDVTSASTPARFW*VRIGLA
Trigger: TGCCAACCCTATCCTCACCAACCAGAACCTGGCAGG...GGTTGATGCACTGGTAACATCTGAAAACAAGGTCTTGTCTGATTGGCTTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp CGCACACATACACAGGATGACTCCGGTGAGTGCACGTATGGATGGGATGTAGGTCTCAGGGTTGGAAGGTaGCTGGCAAAAGCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RTHTQDDSGECTYGWDVGLRVGR*LAKALF
Trigger: AAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGAG...ACCTACATCCCATCCATACGTGCACTCACCGGAGTCATCCTGTGTATGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp GTGAATGCACGTATGGATGGGATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGGTTGGAAGGTaGCTGGCAAAAGCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: VNARMDGMQVLSLSLSLSLRVGR*LAKALF
Trigger: AAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGAG...AGAGAGAGAGAGAGAGAGAGAGAGGACCTGCATCCCATCCATACGTGCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS-3UTR CAA 90 bp ACACACACACAGGATGACTCAGGTGAATGCACGTATGGATGGGATGCAGGTACCGCCTCTTGTTTGATCTaGAGTTTGAGACCAATGCGG +
Preference number: 5 (lower is better)
Translates to: THTQDDSGECTYGWDAGTASCLI*SLRPMR
Trigger: CCGCATTGGTCTCAAACTCAAGATCAAACAAGAGGC...GGTACCTGCATCCCATCCATACGTGCATTCACCTGAGTCATCCTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210781.2
CDS GCA 72 bp AAGGCCCGGGGCCACCGCCAGCGGCTGTCCCGAGGGTaGCCCACTGGCTGCTGCAGTGGCAGCCCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: KARGHRQRLSRG*PTGCCSGSPCP
Trigger: GGGACAGGGGCTGCCACTGCAGCAGCCAGTGGGGCACCCTCGGGACAGCCGCTGGCGGTGGCCCCGGGCCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GCGGCTGTCCCGAGGGTGCCCCACTGGCTGCTGCAGTaGCAGCCCCTGTCCCGGCAAACACCGAGTTCCCGT +
Preference number: 6 (lower is better)
Translates to: AAVPRVPHWLLQ*QPLSRQTPSSR
Trigger: ACGGGAACTCGGTGTTTGCCGGGACAGGGGCTGCCACTGCAGCAGCCAGTGGGGCACCCTCGGGACAGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GGGTGCCGTGGGCTCAGGGACCATGTGGAGGGCTGGTaGCGGAGTAGGGGACTTATGGGGTCCCTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: GCRGLRDHVEGW*RSRGLMGSLAR
Trigger: CCGAGCCAGGGACCCCATAAGTCCCCTACTCCGCCACCAGCCCTCCACATGGTCCCTGAGCCCACGGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CGGAGCTGGGTGTGGCGGAGGCTCCGCCCCTTTCGCTaGGGTTGGAGCCGGCAAGGGCTGATGCACAGGATC +
Preference number: 6 (lower is better)
Translates to: RSWVWRRLRPFR*GWSRQGLMHRI
Trigger: GATCCTGTGCATCAGCCCTTGCCGGCTCCAACCCCAGCGAAAGGGGCGGAGCCTCCGCCACACCCAGCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CCTCCACCGCTGCCAGCTCCCGGATCAGCCCACTGGTaGCTTCGTCTACCTTGGTGGGCAGTGGGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PPPLPAPGSAHW*LRLPWWAVGWG
Trigger: GCCCCACCCCACTGCCCACCAAGGTAGACGAAGCCACCAGTGGGCTGATCCGGGAGCTGGCAGCGGTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp CACCAGGGCCTGGTGGGTCAGTACAGTGGGCGGGGCTaGCAGCCCCAGCAGATCCGCGCTGCCTGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: HQGLVGQYSGRG*QPQQIRAAWEE
Trigger: CTCTTCCCAGGCAGCGCGGATCTGCTGGGGCTGCAAGCCCCGCCCACTGTACTGACCCACCAGGCCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GAGAGCCTGGGGTCCTGCAGTCACTGCCGTGGCTCCTaGGGCTCCAGTAGCACCTGCCCCATTGTCAGCGGG +
Preference number: 6 (lower is better)
Translates to: ESLGSCSHCRGS*GSSSTCPIVSG
Trigger: CCCGCTGACAATGGGGCAGGTGCTACTGGAGCCGCAGGAGCCACGGCAGTGACTGCAGGACCCCAGGCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CGTCCTGGCACCGAGGCCACCATTGTGACTAGAGGGTaGGAAGGCGTCAGGCCTGTGCAGGGGCGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: RPGTEATIVTRG*EGVRPVQGRWG
Trigger: TCCCCAGCGCCCCTGCACAGGCCTGACGCCTTCCCACCCTCTAGTCACAATGGTGGCCTCGGTGCCAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp GGTGGCTGTGGCGGGGCTGTCCCCGTGGTGGTGACTGGTGGCTGCTaGAACACATTCGCCTGCAAAGCCGGTGCCGGGAAGCCAGACAGC +
Preference number: 6 (lower is better)
Translates to: GGCGGAVPVVVTGGC*NTFACKAGAGKPDS
Trigger: GCTGTCTGGCTTCCCGGCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACCACGGGGACAGCCCCGCCACAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp CGGCTGGCTCTGAGTAGGCAGGCTGCCAGTGGCCAGTaGCACAGGCATCTGGAAGAGGGCAGGCTGGCCCAC +
Preference number: 6 (lower is better)
Translates to: RLALSRQAASGQ*HRHLEEGRLAH
Trigger: GTGGGCCAGCCTGCCCTCTTCCAGATGCCTGTGTCACTGGCCACTGGCAGCCTGCCTACTCAGAGCCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp GGTGTGGTGACAGCAGGGGGCACCTGGGTTGCAGGCTaGACGGCCAGAACTGGTGTGGCCTCCCCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: GVVTAGGTWVAG*TARTGVASPVV
Trigger: CACCACTGGGGAGGCCACACCAGTTCTGGCCGTTCAGCCTGCAACCCAGGTGCCCCCTGCTGTCACCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp AGGAGGGGGCTGGGCAGACGTTCCAGATGTGGAGGATaGAGACGACTGGCCATGGCTGGGGAGCCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RRGLGRRSRCGG*RRLAMAGEPVA
Trigger: GGCCACCGGCTCCCCAGCCATGGCCAGTCGTCTTCATCCTCCACATCTGGAACGTCTGCCCAGCCCCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp TGTGGCGGGGCTGTCCCCGTGGTGGTGACTGGTGGCTaGTTGAACACATTCGCCTGCAAAGCCGGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: CGGAVPVVVTGG*LNTFACKAGAG
Trigger: CCCGGCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACCACGGGGACAGCCCCGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp TACCATCTGGAAGGTCCGAGGTGGTGGAGGAGGGGGTaGCGTGGGCTCAGGGACCATGTGGAGGGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: YHLEGPRWWRRG*RGLRDHVEGWW
Trigger: CCACCAGCCCTCCACATGGTCCCTGAGCCCACGGCACCCCCTCCTCCACCACCTCGGACCTTCCAGATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TGGGAAGGGGGCGGTTACCATCTGGAAGGTCCGAGGTaGTGGAGGAGGGGGTGCCGTGGGCTCAGGGACCAT +
Preference number: 6 (lower is better)
Translates to: WEGGGYHLEGPR*WRRGCRGLRDH
Trigger: ATGGTCCCTGAGCCCACGGCACCCCCTCCTCCACCACCTCGGACCTTCCAGATGGTAACCGCCCCCTTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp CCCACAGGCTGCAGGAAGGGCTGGACGCTCAAGGCCTaGTTGACCACATCCTGGGGTGGCACCAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PTGCRKGWTLKA*LTTSWGGTRAW
Trigger: CCAGGCCCTGGTGCCACCCCAGGATGTGGTCAACAAGGCCTTGAGCGTCCAGCCCTTCCTGCAGCCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp GGCGGGGCTGTCCCCGTGGTGGTGACTGGTGGCTGCTaGAACACATTCGCCTGCAAAGCCGGTGCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: GGAVPVVVTGGC*NTFACKAGAGK
Trigger: CTTCCCGGCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACCACGGGGACAGCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp TCTCCTGGGGCAGGAACATCTGTAGGGAATCCTGAGTaGGGATGGCCGTTGTGGCCGCAGGGGGCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SPGAGTSVGNPE*GWPLWPQGAPA
Trigger: GGCAGGCGCCCCCTGCGGCCACAACGGCCATCCTCACTCAGGATTCCCTACAGATGTTCCTGCCCCAGGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp CTCCTCTCCTGGGGCAGGAACATCTGTAGGGAATCCTaGGTGAGGATGGCCGTTGTGGCCGCAGGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: LLSWGRNICRES*VRMAVVAAGGA
Trigger: GGCGCCCCCTGCGGCCACAACGGCCATCCTCACTCAGGATTCCCTACAGATGTTCCTGCCCCAGGAGAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp AGAAGCTGGCCTGGTCCACGTCCGGGGACTCAGACTTaGGTCGTTTGGCTGGGGGTAGCACGGGTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RSWPGPRPGTQT*VVWLGVARVLP
Trigger: GGGAAGCACCCGTGCTACCCCCAGCCAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGGCCAGCTTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CTAGGAAGTCCAGGTCCACGCTGGGGGCAGGCTGGCTaGGCTCAGGGTTTAGGTGGTTGGCGGCAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LGSPGPRWGQAG*AQGLGGWRQLP
Trigger: AGGAAGCTGCCGCCAACCACCTAAACCCTGAGCCCAGCCAGCCTGCCCCCAGCGTGGACCTGGACTTCCTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GCCTTAGGCTGCTGGGGCAAGGTGCCTGGTTCACCCTaGATGGTAAGGGTGGCTCCGGTAGGGGGAAAGGGC +
Preference number: 6 (lower is better)
Translates to: ALGCWGKVPGSP*MVRVAPVGGKG
Trigger: GCCCTTTCCCCCTACCGGAGCCACCCTTACCATCCAGGGTGAACCAGGCACCTTGCCCCAGCAGCCTAAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TGGCTGTGGCGGGGCTGTCCCCGTGGTGGTGACTGGTaGCTGCTTGAACACATTCGCCTGCAAAGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: WLWRGCPRGGDW*LLEHIRLQSRC
Trigger: GCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACCACGGGGACAGCCCCGCCACAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TGGTGGCTGTGGCGGGGCTGTCCCCGTGGTGGTGACTaGTGGCTGCTTGAACACATTCGCCTGCAAAGCCGG +
Preference number: 6 (lower is better)
Translates to: WWLWRGCPRGGD*WLLEHIRLQSR
Trigger: CCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCAGTCACCACCACGGGGACAGCCCCGCCACAGCCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp AGGCCTGTGGTGGCCATAGGTGTGGAGGCTGGGACATaGCTAGAGGCGGCAGGAGTCCCAGGTGGTGCCTGT +
Preference number: 6 (lower is better)
Translates to: RPVVAIGVEAGT*LEAAGVPGGAC
Trigger: ACAGGCACCACCTGGGACTCCTGCCGCCTCTAGCCATGTCCCAGCCTCCACACCTATGGCCACCACAGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GAGGATGAAGACGACTGGCCATGGCTGGGGAGCCGGTaGCCCTCGGAAGACACTGGGACAGGGAAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: EDEDDWPWLGSR*PSEDTGTGKPR
Trigger: CCTTGGCTTCCCTGTCCCAGTGTCTTCCGAGGGCCACCGGCTCCCCAGCCATGGCCAGTCGTCTTCATCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp ACCAATGCGGCTCCGGGCCTCATAGGTCTTGATGGGTaGCCGGTTACGGGTGGGCATGGGGCCGTCCTCATC +
Preference number: 6 (lower is better)
Translates to: TNAAPGLIGLDG*PVTGGHGAVLI
Trigger: GATGAGGACGGCCCCATGCCCACCCGTAACCGGCCACCCATCAAGACCTATGAGGCCCGGAGCCGCATTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp GCCTGGTCCACGTCCGGGGACTCAGACTTGCGTCGTTaGGCTGGGGGTAGCACGGGTGCTTCCCAACTGGGT +
Preference number: 6 (lower is better)
Translates to: AWSTSGDSDLRR*AGGSTGASQLG
Trigger: ACCCAGTTGGGAAGCACCCGTGCTACCCCCAGCCAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp GAGAAGCTGGCCTGGTCCACGTCCGGGGACTCAGACTaGCGTCGTTTGGCTGGGGGTAGCACGGGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: EKLAWSTSGDSD*RRLAGGSTGAS
Trigger: GGAAGCACCCGTGCTACCCCCAGCCAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGGCCAGCTTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp TGGCCTCCCACGTTGGCAGGCAGTGCAGAGAGTGACTaGGGGAGTTGTACGGCTGGGGTGCCTGGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: WPPTLAGSAESD*GSCTAGVPGSK
Trigger: CTTGCTGCCAGGCACCCCAGCCGTACAACTCCCTCAGTCACTCTCTGCACTGCCTGCCAACGTGGGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp TCCGCCCCTTTCGCTGGGGTTGGAGCCGGCAAGGGCTaGTGCACAGGATCCAGTGCAGTGTTGTGCACCACC +
Preference number: 6 (lower is better)
Translates to: SAPFAGVGAGKG*CTGSSAVLCTT
Trigger: GGTGGTGCACAACACTGCACTGGATCCTGTGCATCAGCCCTTGCCGGCTCCAACCCCAGCGAAAGGGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp TGGGTGGCCGCCTGTGGAGTAGGGACCTGTGGAGGCTaGTGTGCCTGTGGCTGTTGGAGACCCATAGGCAGT +
Preference number: 6 (lower is better)
Translates to: WVAACGVGTCGG*CACGCWRPIGS
Trigger: ACTGCCTATGGGTCTCCAACAGCCACAGGCACAGCAGCCTCCACAGGTCCCTACTCCACAGGCGGCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GGTTGGAGCCGGCAAGGGCTGATGCACAGGATCCAGTaGAGTGTTGTGCACCACCTTGCTGAGCCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: GWSRQGLMHRIQ*SVVHHLAEPRL
Trigger: GAGGCGGGGCTCAGCAAGGTGGTGCACAACACTGCACTGGATCCTGTGCATCAGCCCTTGCCGGCTCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GCTGGAAGATTTTTCTGGATGACCAGGCCGGCTCCCTaGGGGGACACGCCGGCAGATGCCAGTGTCACTGGC +
Preference number: 6 (lower is better)
Translates to: AGRFFWMTRPAP*GDTPADASVTG
Trigger: GCCAGTGACACTGGCATCTGCCGGCGTGTCCCCCCAGGGAGCCGGCCTGGTCATCCAGAAAAATCTTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GCTGAACGGCCAGAACTGGTGTGGCCTCCCCAGTGGTaGCAGCTGGAGTGGAGGGTTGCACTAGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: AERPELVWPPQW*QLEWRVALAHQ
Trigger: CTGATGGGCTAGTGCAACCCTCCACTCCAGCTGCCACCACTGGGGAGGCCACACCAGTTCTGGCCGTTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CTGCTGTGCCTGTGGCTGTTGGAGACCCATAGGCAGTaGTGTGGTGACAGCAGGGGGCACCTGGGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: LLCLWLLETHRQ*CGDSRGHLGCR
Trigger: CCTGCAACCCAGGTGCCCCCTGCTGTCACCACACCACTGCCTATGGGTCTCCAACAGCCACAGGCACAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp AGGACCGGTGAGGGTCCCCAGGGTGGTGGATGTCTGTaGGGTGGTGGGAGTACCCCCAGCCTTATTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RTGEGPQGGGCL*GGGSTPSLILE
Trigger: CTCCAGAATAAGGCTGGGGGTACTCCCACCACCCCACAGACATCCACCACCCTGGGGACCCTCACCGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TGGGCAGACGTTCCAGATGTGGAGGATGAAGACGACTaGCCATGGCTGGGGAGCCGGTGGCCCTCGGAAGAC +
Preference number: 6 (lower is better)
Translates to: WADVPDVEDEDD*PWLGSRWPSED
Trigger: GTCTTCCGAGGGCCACCGGCTCCCCAGCCATGGCCAGTCGTCTTCATCCTCCACATCTGGAACGTCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CCTGGTCCACGTCCGGGGACTCAGACTTGCGTCGTTTaGCTGGGGGTAGCACGGGTGCTTCCCAACTGGGTT +
Preference number: 6 (lower is better)
Translates to: PGPRPGTQTCVV*LGVARVLPNWV
Trigger: AACCCAGTTGGGAAGCACCCGTGCTACCCCCAGCCAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp CTGGGAGGTGGGTGGGTTGAGAGCCATGACGGGCTGGCCCACCACTaGAATAGGTGTCAGACCCAAGGTGGCTGCTGCAGCATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LGGGWVESHDGLAHH*NRCQTQGGCCSIPR
Trigger: CCTGGGAATGCTGCAGCAGCCACCTTGGGTCTGACACCTATTCAAGTGGTGGGCCAGCCCGTCATGGCTCTCAACCCACCCACCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp CTGTCACTAGAGAAGCTGGCCTGGTCCACGTCCGGGGACTCAGACTaGCGTCGTTTGGCTGGGGGTAGCACGGGTGCTTCCCAACTGGGT +
Preference number: 6 (lower is better)
Translates to: LSLEKLAWSTSGDSD*RRLAGGSTGASQLG
Trigger: ACCCAGTTGGGAAGCACCCGTGCTACCCCCAGCCAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGGCCAGCTTCTCTAGTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp AGGGTTGGCAATGAGCTGTCCACCTGCGTGTGGTGCTaGAGCTGTGAGGATCTGGCCTCCCACGTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: RVGNELSTCVWC*SCEDLASHVGR
Trigger: CCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GCGGCCGTCCCTGTGCACCCTCGGCGGCACCAGGATTaGCCATGTTTTCTCGGTAGGTCTTGCGTAGTGGTA +
Preference number: 6 (lower is better)
Translates to: AAVPVHPRRHQD*PCFLGRSCVVV
Trigger: TACCACTACGCAAGACCTACCGAGAAAACATGGGCAATCCTGGTGCCGCCGAGGGTGCACAGGGACGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp AAGGGCTGGACGCTCAAGGCCTTGTTGACCACATCCTaGGGTGGCACCAGGGCCTGGTGGGTCAGTACAGTG +
Preference number: 6 (lower is better)
Translates to: KGWTLKALLTTS*GGTRAWWVSTV
Trigger: CACTGTACTGACCCACCAGGCCCTGGTGCCACCCCAGGATGTGGTCAACAAGGCCTTGAGCGTCCAGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TGTCCACCTGCGTGTGGTGCTGCAGCTGTGAGGATCTaGCCTCCCACGTTGGCAGGCAGTGCAGAGAGTGAC +
Preference number: 6 (lower is better)
Translates to: CPPACGAAAVRI*PPTLAGSAESD
Trigger: GTCACTCTCTGCACTGCCTGCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp ACCATGTGGAGGGCTGGTGGCGGAGTAGGGGACTTATaGGGTCCCTGGCTCGGTGGGAACTGGAGTTGGAAG +
Preference number: 6 (lower is better)
Translates to: TMWRAGGGVGDL*GPWLGGNWSWK
Trigger: CTTCCAACTCCAGTTCCCACCGAGCCAGGGACCCCATAAGTCCCCTACTCCGCCACCAGCCCTCCACATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp TCAGACCCAAGGTGGCTGCTGCAGCATTCCCAGGACTaGCATTGGGAAGGCCCTGGAGGCCTGAAATGGGCT +
Preference number: 6 (lower is better)
Translates to: SDPRWLLQHSQD*HWEGPGGLKWA
Trigger: AGCCCATTTCAGGCCTCCAGGGCCTTCCCAATGGCAGTCCTGGGAATGCTGCAGCAGCCACCTTGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp TGGTGGCTGCTTGAACACATTCGCCTGCAAAGCCGGTaGCGGGAAGCCAGACAGCACCACATTCTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: WWLLEHIRLQSR*REARQHHILAS
Trigger: GCTGGCCAGAATGTGGTGCTGTCTGGCTTCCCGGCACCGGCTTTGCAGGCGAATGTGTTCAAGCAGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GTGCAGAGAGTGACTGAGGGAGTTGTACGGCTGGGGTaGCTGGCAGCAAGAACTGGTTCTGGCCAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: VQRVTEGVVRLG*LAARTGSGQAA
Trigger: TGCTGCCTGGCCAGAACCAGTTCTTGCTGCCAGGCACCCCAGCCGTACAACTCCCTCAGTCACTCTCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GATAGGGTTGGCAATGAGCTGTCCACCTGCGTGTGGTaGTGCAGCTGTGAGGATCTGGCCTCCCACGTTGGC +
Preference number: 6 (lower is better)
Translates to: DRVGNELSTCVW*CSCEDLASHVG
Trigger: GCCAACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp CGGCACCAGGATTGCCCATGTTTTCTCGGTAGGTCTTaGGTAGTGGTAGACGTGGGCAGGACGCAGGCACCG +
Preference number: 6 (lower is better)
Translates to: RHQDCPCFLGRS*VVVDVGRTQAP
Trigger: CGGTGCCTGCGTCCTGCCCACGTCTACCACTACGCAAGACCTACCGAGAAAACATGGGCAATCCTGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp AGTAGGGACCTGTGGAGGCTGCTGTGCCTGTGGCTGTaGGAGACCCATAGGCAGTGGTGTGGTGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: SRDLWRLLCLWL*ETHRQWCGDSR
Trigger: CCTGCTGTCACCACACCACTGCCTATGGGTCTCCAACAGCCACAGGCACAGCAGCCTCCACAGGTCCCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp GCTGCTGCAGTGGCAGCCCCTGTCCCGGCAAACACCGAGTTCCCGTaGAGTGTGGTGGTCACTGCGGCTGGAAGATTTTTCTGGATGACC +
Preference number: 6 (lower is better)
Translates to: AAAVAAPVPANTEFP*SVVVTAAGRFFWMT
Trigger: GGTCATCCAGAAAAATCTTCCAGCCGCAGTGACCACCACACTCAACGGGAACTCGGTGTTTGCCGGGACAGGGGCTGCCACTGCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp GAGGCTGGGGTGCTGGCTGGTGGTGGGGCGCCCAATTaGTTCTGGATGACAAAGATGCCAGGTAGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: EAGVLAGGGAPN*FWMTKMPGRVG
Trigger: CCCAACTCTACCTGGCATCTTTGTCATCCAGAATCAATTGGGCGCCCCACCACCAGCCAGCACCCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp TATCTGTTCAACGTCCTGGCACCGAGGCCACCATTGTaGCTAGAGGGTGGGAAGGCGTCAGGCCTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: YLFNVLAPRPPL*LEGGKASGLCR
Trigger: CCTGCACAGGCCTGACGCCTTCCCACCCTCTAGTCACAATGGTGGCCTCGGTGCCAGGACGTTGAACAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GTTGGTGAGGATAGGGTTGGCAATGAGCTGTCCACCTaGGTGTGGTGCTGCAGCTGTGAGGATCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: VGEDRVGNELST*VWCCSCEDLAS
Trigger: GGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATCCTCACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CACCGAGTTCCCGTTGAGTGTGGTGGTCACTGCGGCTaGAAGATTTTTCTGGATGACCAGGCCGGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: HRVPVECGGHCG*KIFLDDQAGSL
Trigger: CAGGGAGCCGGCCTGGTCATCCAGAAAAATCTTCCAGCCGCAGTGACCACCACACTCAACGGGAACTCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GAGGATAGGGTTGGCAATGAGCTGTCCACCTGCGTGTaGTGCTGCAGCTGTGAGGATCTGGCCTCCCACGTT +
Preference number: 6 (lower is better)
Translates to: EDRVGNELSTCV*CCSCEDLASHV
Trigger: AACGTGGGAGGCCAGATCCTCACAGCTGCAGCACCACACGCAGGTGGACAGCTCATTGCCAACCCTATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp AGCACTGGGCCCAGACTCAGTGGGCCTGCCAGGTTCTaGTTGGTGAGGATAGGGTTGGCAATGAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: STGPRLSGPARF*LVRIGLAMSCP
Trigger: TGGACAGCTCATTGCCAACCCTATCCTCACCAACCAGAACCTGGCAGGCCCACTGAGTCTGGGCCCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GTATCATCCTGCGGGCTGTCACTAGAGAAGCTGGCCTaGTCCACGTCCGGGGACTCAGACTTGCGTCGTTTG +
Preference number: 6 (lower is better)
Translates to: VSSCGLSLEKLA*STSGDSDLRRL
Trigger: CAAACGACGCAAGTCTGAGTCCCCGGACGTGGACCAGGCCAGCTTCTCTAGTGACAGCCCGCAGGATGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp CAGATGGCACCTGGTGGAATCGTTCCAGAAGTGCTTTaGGCTGGGGCAACGCTGGGAAGGGGGCGGTTACCA +
Preference number: 6 (lower is better)
Translates to: QMAPGGIVPEVL*AGATLGRGRLP
Trigger: TGGTAACCGCCCCCTTCCCAGCGTTGCCCCAGCCAAAAGCACTTCTGGAACGATTCCACCAGGTGCCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp TTCTTCATCCACTTTATGGTAGTCGTTGGGGGAGGGGAGGGCGCCTaGGTAGACATGGTAGGGCAGGAGGCGATGGAGGGCGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: FFIHFMVVVGGGEGA*VDMVGQEAMEGVLK
Trigger: TTTGAGGACGCCCTCCATCGCCTCCTGCCCTACCATGTCTACCAAGGCGCCCTCCCCTCCCCCAACGACTACCATAAAGTGGATGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp AGCATGTGCTGGGCTGGGATCACGATGCTGCTGCCTTaGTTGAGGAGGTGGACGCTCATGGGTTTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SMCWAGITMLLP*LRRWTLMGLLR
Trigger: CCTCAGCAAACCCATGAGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGTGATCCCAGCCCAGCACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp CACCACTTGAATAGGTGTCAGACCCAAGGTGGCTGCTaGAGCATTCCCAGGACTGCCATTGGGAAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: HHLNRCQTQGGC*SIPRTAIGKAL
Trigger: CAGGGCCTTCCCAATGGCAGTCCTGGGAATGCTGCAGCAGCCACCTTGGGTCTGACACCTATTCAAGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GGCAAACACCGAGTTCCCGTTGAGTGTGGTGGTCACTaGGGCTGGAAGATTTTTCTGGATGACCAGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GKHRVPVECGGH*GWKIFLDDQAG
Trigger: GCCGGCCTGGTCATCCAGAAAAATCTTCCAGCCGCAGTGACCACCACACTCAACGGGAACTCGGTGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CCAAGATATCATCTTCTAGGAAGTCCAGGTCCACGCTaGGGGCAGGCTGGCTGGGCTCAGGGTTTAGGTGGT +
Preference number: 6 (lower is better)
Translates to: PRYHLLGSPGPR*GQAGWAQGLGG
Trigger: ACCACCTAAACCCTGAGCCCAGCCAGCCTGCCCCCAGCGTGGACCTGGACTTCCTAGAAGATGATATCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CAAGAACTGGTTCTGGCCAGGCAGCATGTGCTGGGCTaGGATCACGATGCTGCTGCCTTGATTGAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: QELVLARQHVLG*DHDAAALIEEV
Trigger: CACCTCCTCAATCAAGGCAGCAGCATCGTGATCCCAGCCCAGCACATGCTGCCTGGCCAGAACCAGTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp CAGCATGTGCTGGGCTGGGATCACGATGCTGCTGCCTaGATTGAGGAGGTGGACGCTCATGGGTTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: QHVLGWDHDAAA*IEEVDAHGFAE
Trigger: CTCAGCAAACCCATGAGCGTCCACCTCCTCAATCAAGGCAGCAGCATCGTGATCCCAGCCCAGCACATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp ATTGCTGGGGGCTTCCCTGGCCCAGACACGGTAGCTTaGGCCACACTCAGGGTTGGAAGGTTGCTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: IAGGFPGPDTVA*ATLRVGRLLAK
Trigger: TTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCCAAAGCTACCGTGTCTGGGCCAGGGAAGCCCCCAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp GTGTTGTGCACCACCTTGCTGAGCCCCGCCTCTTGTTaGATCTTGAGTTTGAGACCAATGCGGCTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: VLCTTLLSPASC*ILSLRPMRLRA
Trigger: GGCCCGGAGCCGCATTGGTCTCAAACTCAAGATCAAACAAGAGGCGGGGCTCAGCAAGGTGGTGCACAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp CCTGGCCCAGACACGGTAGCTTTGGCCACACTCAGGGTTGGAAGGTaGCTGGCAAAAGCTTTGTTTTCGGCAGGAAGTAGAGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: PGPDTVALATLRVGR*LAKALFSAGSRGGR
Trigger: CCTCCCTCCTCTACTTCCTGCCGAAAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCCAAAGCTACCGTGTCTGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp AGGATCCAGTGCAGTGTTGTGCACCACCTTGCTGAGCCCCGCCTCTaGTTTGATCTTGAGTTTGAGACCAATGCGGCTCCGGGCCTCATA +
Preference number: 6 (lower is better)
Translates to: RIQCSVVHHLAEPRL*FDLEFETNAAPGLI
Trigger: TATGAGGCCCGGAGCCGCATTGGTCTCAAACTCAAGATCAAACAAGAGGCGGGGCTCAGCAAGGTGGTGCACAACACTGCACTGGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp GTCTGTGGGGTGGTGGGAGTACCCCCAGCCTTATTCTaGAGAATAATCCCAGATGGCACCTGGTGGAATCGT +
Preference number: 6 (lower is better)
Translates to: VCGVVGVPPALF*RIIPDGTWWNR
Trigger: ACGATTCCACCAGGTGCCATCTGGGATTATTCTCCAGAATAAGGCTGGGGGTACTCCCACCACCCCACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TGGCCCAGACACGGTAGCTTTGGCCACACTCAGGGTTaGAAGGTTGCTGGCAAAAGCTTTGTTTTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: WPRHGSFGHTQG*KVAGKSFVFGR
Trigger: CCTGCCGAAAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCCAAAGCTACCGTGTCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp GCCACACTCAGGGTTGGAAGGTTGCTGGCAAAAGCTTaGTTTTCGGCAGGAAGTAGAGGAGGGAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: ATLRVGRLLAKA*FSAGSRGGRPV
Trigger: CACAGGCCTCCCTCCTCTACTTCCTGCCGAAAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp TGCAGTGTTGTGCACCACCTTGCTGAGCCCCGCCTCTaGTTTGATCTTGAGTTTGAGACCAATGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: CSVVHHLAEPRL*FDLEFETNAAP
Trigger: CGGAGCCGCATTGGTCTCAAACTCAAGATCAAACAAGAGGCGGGGCTCAGCAAGGTGGTGCACAACACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GCCTGCTGCAGGTTAAGGATGCTGTCGATGGCACTCTaGAAATGCTCAGTAAGTGTATCATCCTGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: ACCRLRMLSMAL*KCSVSVSSCGL
Trigger: CAGCCCGCAGGATGATACACTTACTGAGCATTTGCAGAGTGCCATCGACAGCATCCTTAACCTGCAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp GGCTGTTTCTTCAAGCTACACAACTTGCTGTCATACTaGATTGCTGGGGGCTTCCCTGGCCCAGACACGGTA +
Preference number: 6 (lower is better)
Translates to: GCFFKLHNLLSY*IAGGFPGPDTV
Trigger: TACCGTGTCTGGGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGCAAGTTGTGTAGCTTGAAGAAACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GTTGCAGTAGGGGCTGTTTCTTCAAGCTACACAACTTaGTGTCATACTGAATTGCTGGGGGCTTCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: VAVGAVSSSYTT*CHTELLGASLA
Trigger: GGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGCAAGTTGTGTAGCTTGAAGAAACAGCCCCTACTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp GGTGTTTGTGCAGATGCTCCAGGAAGCAGGCTTCTTTaGTGGGTTGCAGTAGGGGCTGTTTCTTCAAGCTAC +
Preference number: 6 (lower is better)
Translates to: GVCADAPGSRLL*WVAVGAVSSSY
Trigger: GTAGCTTGAAGAAACAGCCCCTACTGCAACCCAGCAAAGAAGCCTGCTTCCTGGAGCATCTGCACAAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CCAGCCTTATTCTGGAGAATAATCCCAGATGGCACCTaGTGGAATCGTTCCAGAAGTGCTTTTGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: PALFWRIIPDGT*WNRSRSAFGWG
Trigger: GCCCCAGCCAAAAGCACTTCTGGAACGATTCCACCAGGTGCCATCTGGGATTATTCTCCAGAATAAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp CAGTCTCAAATTCTTCATCCACTTTATGGTAGTCGTTaGGGGAGGGGAGGGCGCCTTGGTAGACATGGTAGG +
Preference number: 6 (lower is better)
Translates to: QSQILHPLYGSR*GRGGRLGRHGR
Trigger: CCTACCATGTCTACCAAGGCGCCCTCCCCTCCCCCAACGACTACCATAAAGTGGATGAAGAATTTGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 90 bp GGACTGACTCTCCTGGACTCTTCCAGAAGCAAAAGCCGATATTTATaGAGCATGGCCTGGGTGCGTTTGAGCAGCTGCGTAGAGACAGTC +
Preference number: 6 (lower is better)
Translates to: GLTLLDSSRSKSRYL*SMAWVRLSSCVETV
Trigger: GACTGTCTCTACGCAGCTGCTCAAACGCACCCAGGCCATGCTCAATAAATATCGGCTTTTGCTTCTGGAAGAGTCCAGGAGAGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp GACACGGTAGCTTTGGCCACACTCAGGGTTGGAAGGTaGCTGGCAAAAGCTTTGTTTTCGGCAGGAAGTAGA +
Preference number: 6 (lower is better)
Translates to: DTVALATLRVGR*LAKALFSAGSR
Trigger: TCTACTTCCTGCCGAAAACAAAGCTTTTGCCAGCAACCTTCCAACCCTGAGTGTGGCCAAAGCTACCGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CAA 72 bp TGGTGTTTGTGCAGATGCTCCAGGAAGCAGGCTTCTTaGCTGGGTTGCAGTAGGGGCTGTTTCTTCAAGCTA +
Preference number: 6 (lower is better)
Translates to: WCLCRCSRKQAS*LGCSRGCFFKL
Trigger: TAGCTTGAAGAAACAGCCCCTACTGCAACCCAGCAAAGAAGCCTGCTTCCTGGAGCATCTGCACAAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp CGCTGTCCAGCTTCTCGGATCCATGCAAGAAATCATTaGGGGCCTGAGGATCACAAATCACGTCTAGTAAGC +
Preference number: 6 (lower is better)
Translates to: RCPASRIHARNH*GPEDHKSRLVS
Trigger: GCTTACTAGACGTGATTTGTGATCCTCAGGCCCTCAATGATTTCTTGCATGGATCCGAGAAGCTGGACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS TCA 72 bp AGCTGCTTATCCAAGGCAAGGGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATCATAACCATCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SCLSKARVVFSS*MNIRSIITISA
Trigger: TGCGGAGATGGTTATGATCGACCGAATGTTCATTCAGGAGGAGAAGACCACCCTTGCCTTGGATAAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS GCA 72 bp TTTCTTCAAGCTACACAACTTGCTGTCATACTGAATTaGTGGGGGCTTCCCTGGCCCAGACACGGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: FLQATQLAVILN*WGLPWPRHGSF
Trigger: AAAGCTACCGTGTCTGGGCCAGGGAAGCCCCCAGCAATTCAGTATGACAGCAAGTTGTGTAGCTTGAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp AGTACCCCCAGCCTTATTCTGGAGAATAATCCCAGATaGCACCTGGTGGAATCGTTCCAGAAGTGCTTTTGG +
Preference number: 6 (lower is better)
Translates to: STPSLILENNPR*HLVESFQKCFW
Trigger: CCAAAAGCACTTCTGGAACGATTCCACCAGGTGCCATCTGGGATTATTCTCCAGAATAAGGCTGGGGGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2
CDS CCA 72 bp TCCAGAAGCAAAAGCCGATATTTATTGAGCATGGCCTaGGTGCGTTTGAGCAGCTGCGTAGAGACAGTCTCA +
Preference number: 6 (lower is better)
Translates to: SRSKSRYLLSMA*VRLSSCVETVS
Trigger: TGAGACTGTCTCTACGCAGCTGCTCAAACGCACCCAGGCCATGCTCAATAAATATCGGCTTTTGCTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094821.4
ENSMUST00000210781.2