Pregenerated sensors for BICD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003452Ensembl transcript IDs: ENSMUST00000003544.14, ENSMUST00000086829.11, ENSMUST00000111513.9, ENSMUST00000172926.2, ENSMUST00000173408.8
Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAGGGGTAAGGAGGCTTGGTGAGACAATGAAGAGGTGCACACTGTaGGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACT | + |
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Preference number: 1 (lower is better) Translates to: LGVRRLGETMKRCTL*AGMWLFLTEGNVRT Trigger: AGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGCACCTCTTCATTGTCTCACCAAGCCTCCTTACCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| 3UTR CCA 90 bp | AGTGCAGTGGGTGCTATCCTCTCACACAGGTTCAGCAAACACCCCTaGCTGAGTTACTCCCTACTCCTGCCCACTGATTTCTTTGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: SAVGAILSHRFSKHP*LSYSLLLPTDFFVR Trigger: TCTTACAAAGAAATCAGTGGGCAGGAGTAGGGAGTAACTCAGCCAGGGGTGTTTGCTGAACCTGTGTGAGAGGATAGCACCCACTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR TCA 90 bp | AAGGAGTCAGGGTTAGGCGCAGTTATGTGGGCAGCACTTGAGAACTaGGGAATCCAAGTTAGACCTTACAGCTCAACTAGCTGTTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: KESGLGAVMWAALEN*GIQVRPYSSTSCCP Trigger: AGGACAACAGCTAGTTGAGCTGTAAGGTCTAACTTGGATTCCTCAGTTCTCAAGTGCTGCCCACATAACTGCGCCTAACCCTGACTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR CCA 90 bp | CACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTaGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: HSWKGNPSEEMILWR*DQGELLINSVGRKP Trigger: GGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR CCA 90 bp | TTAGGTCACCACTCCATAAACATGCACATCTTTCCCTCCACAAGCTaGGTAGCTCTAAAATCGCCATTGTTGGTGTCCTACAAAACTAGT | + |
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Preference number: 1 (lower is better) Translates to: LGHHSINMHIFPSTS*VALKSPLLVSYKTS Trigger: ACTAGTTTTGTAGGACACCAACAATGGCGATTTTAGAGCTACCCAGCTTGTGGAGGGAAAGATGTGCATGTTTATGGAGTGGTGACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR TCA 90 bp | ATGCAGCTATGTCAACAGTGGTTACACAGAGAAGAGATCCACTGTTaGGTTCCCAGCCCAAAGACACAACTTGCTTTGAGGTACTTATTT | + |
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Preference number: 1 (lower is better) Translates to: MQLCQQWLHREEIHC*VPSPKTQLALRYLF Trigger: AAATAAGTACCTCAAAGCAAGTTGTGTCTTTGGGCTGGGAACTCAACAGTGGATCTCTTCTCTGTGTAACCACTGTTGACATAGCTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR TCA 90 bp | AAGAGATCCACTGTTGAGTTCCCAGCCCAAAGACACAACTTGCTTTaGGGTACTTATTTCCTCAAATACAAAATTAACTTAGTAATTCTG | + |
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Preference number: 1 (lower is better) Translates to: KRSTVEFPAQRHNLL*GTYFLKYKINLVIL Trigger: CAGAATTACTAAGTTAATTTTGTATTTGAGGAAATAAGTACCTCAAAGCAAGTTGTGTCTTTGGGCTGGGAACTCAACAGTGGATCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | GTTGTGAGCACTGTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGGCCGATGCCCTTGGATaGGTTCACTCATGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VVSTVAVRRQQAADNLVEADALG*VHSWKG Trigger: CCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGC...CTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGTGAGCACTGTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGACCCTTCAGAAGAAATaGTTCTGTGGAGGTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: VVSTVAVRRQQAADNLVETLQKK*FCGGGI Trigger: GATCCCACCTCCACAGAATCATTTCTTCTGAAGGGT...CTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGAAGAGGTGCACACTGTaGGCTGGAATGTGGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQKRCTL*AGMWLF Trigger: GAACAGCCACATTCCAGCTCACAGTGTGCACCTCTT...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGGGCTTGGTGAGACAATaGAGAGGTGCACACTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AHCELECGCSLLRAMSGLGLVRQ*RGAHCE Trigger: CTCACAGTGTGCACCTCTTCATTGTCTCACCAAGCC...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGGGTAAGGAGGCTTGGTaGGACAATGAAGAGGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: AHCELECGCSLLRAMSGLGKEAW*DNEEVH Trigger: GTGCACCTCTTCATTGTCTCACCAAGCCTCCTTACC...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTACTGAGGGCAATGTCCGGACTGACCGTTGGGTAGTCTTGCCTCCCAGCCTGAGCCGATGCCCTTaGATGAGTTCACTCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLTEGNVRTDRWVVLPPSLSRCP*MSSLME Trigger: TTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAG...GCTGGGAGGCAAGACTACCCAACGGTCAGTCCGGACATTGCCCTCAGTAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGATGATTCTGTGGAGGTaGGATCAGGGGGAACTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQMILWR*DQGELL Trigger: TAAGAGTTCCCCCTGATCCCACCTCCACAGAATCAT...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGCCAGATATTCATCCATaGGAGATGAAGACTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: AHCELECGCSLLRAMSGLPDIHP*EMKTRG Trigger: ACCCCTAGTCTTCATCTCTCATGGATGAATATCTGG...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAAAGAGGTGCACACTGTaGGCTGGAATGTGGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PVKVTSLEFAGLALSYVKKRCTL*AGMWLF Trigger: GAACAGCCACATTCCAGCTCACAGTGTGCACCTCTT...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGGTAAGGAGGCTTGGTaGGACAATGAAGAGGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LMHLICNFLQEKGPESVRGKEAW*DNEEVH Trigger: GTGCACCTCTTCATTGTCTCACCAAGCCTCCTTACC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTGAAGAGATCCACTGTTaGGTTCCCAGCCCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCEEIHC*VPSPKT Trigger: TGTCTTTGGGCTGGGAACTCAACAGTGGATCTCTTC...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAGGATCTCTGCAAATTTaGGGCCAGCCTGTTCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: PVKVTSLEFAGLALSYVKGSLQI*GQPVLS Trigger: ACTTAGAACAGGCTGGCCTCAAATTTGCAGAGATCC...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACAAGAGGTGCACACTGTaGGCTGGAATGTGGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHKRCTL*AGMWLF Trigger: GAACAGCCACATTCCAGCTCACAGTGTGCACCTCTT...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGGCTTGGTGAGACAATaGAGAGGTGCACACTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHGLVRQ*RGAHCE Trigger: CTCACAGTGTGCACCTCTTCATTGTCTCACCAAGCC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGGTAAGGAGGCTTGGTaGGACAATGAAGAGGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHGKEAW*DNEEVH Trigger: GTGCACCTCTTCATTGTCTCACCAAGCCTCCTTACC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAACAGCTATGTCAACAGTaGTTACACAGAGAAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: PVKVTSLEFAGLALSYVKQLCQQ*LHREEI Trigger: GATCTCTTCTCTGTGTAACCACTGTTGACATAGCTG...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAATGACTGTAGGCACCTaGGTGTTTGTTAAAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: PVKVTSLEFAGLALSYVKMTVGT*VFVKSR Trigger: TCTACTTTTAACAAACACTCAGGTGCCTACAGTCAT...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTAGACACAACTTGCTTTaGGGTACTTATTTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCRHNLL*GTYFLK Trigger: TTTGAGGAAATAAGTACCTCAAAGCAAGTTGTGTCT...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAGTATTTCCTCTGATATaGCACATAGTCATAGCTATG | + |
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Preference number: 2 (lower is better) Translates to: PVKVTSLEFAGLALSYVKVFPLI*HIVIAM Trigger: CATAGCTATGACTATGTGTCATATCAGAGGAAATAC...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAATATTCACAAACACAATaGAGCTATGTCAACAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PVKVTSLEFAGLALSYVKYSQTQ*SYVNSG Trigger: ACCACTGTTGACATAGCTGCATTGTGTTTGTGAATA...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCCAGATATTCATCCATaGGAGATGAAGACTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PEIDHTKVYASFYSSELSPDIHP*EMKTRG Trigger: ACCCCTAGTCTTCATCTCTCATGGATGAATATCTGG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACATTGCAGGTCATCTGTaGTTCAGAGAAACCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHIAGHL*FRETRN Trigger: ATTTCTGGTTTCTCTGAATCACAGATGACCTGCAAT...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR CAA 90 bp | CCCTTCTCATTTAGTCATATAGGCTCTGTAGCTACTCTCTGTCATTaGTTAAGTTCTTTTTGTTGGATTTCATTATTGTACCTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PFSFSHIGSVATLCH*LSSFCWISLLYLFS Trigger: GGAGAAGAGGTACAATAATGAAATCCAACAAAAAGAACTTAACAAATGACAGAGAGTAGCTACAGAGCCTATATGACTAAATGAGAAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR CAA 90 bp | TTCTGTGCCAAAGAAGAAGAGGCAACTTTAACCAGGCCCATAAATTaGGTCAGTTATAAGGGTTTCATTTTTGTTCATTATCACTTCACA | + |
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Preference number: 2 (lower is better) Translates to: FCAKEEEATLTRPIN*VSYKGFIFVHYHFT Trigger: TGTGAAGTGATAATGAACAAAAATGAAACCCTTATAACTGACCAAATTTATGGGCCTGGTTAAAGTTGCCTCTTCTTCTTTGGCACAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR TCA 72 bp | AGGAGGCTTGGTGAGACAATGAAGAGGTGCACACTGTaGGCTGGAATGTGGCTGTTCCTTACTGAGGGCAAT | + |
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Preference number: 3 (lower is better) Translates to: RRLGETMKRCTL*AGMWLFLTEGN Trigger: ATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGCACCTCTTCATTGTCTCACCAAGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| 3UTR TCA 72 bp | CTATCCTCTCACACAGGTTCAGCAAACACCCCTGGCTaGGTTACTCCCTACTCCTGCCCACTGATTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LSSHTGSANTPG*VTPYSCPLISL Trigger: CAAAGAAATCAGTGGGCAGGAGTAGGGAGTAACTCAGCCAGGGGTGTTTGCTGAACCTGTGTGAGAGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR TCA 72 bp | GGGTTAGGCGCAGTTATGTGGGCAGCACTTGAGAACTaGGGAATCCAAGTTAGACCTTACAGCTCAACTAGC | + |
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Preference number: 3 (lower is better) Translates to: GLGAVMWAALEN*GIQVRPYSSTS Trigger: GCTAGTTGAGCTGTAAGGTCTAACTTGGATTCCTCAGTTCTCAAGTGCTGCCCACATAACTGCGCCTAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR CCA 72 bp | CACTCCATAAACATGCACATCTTTCCCTCCACAAGCTaGGTAGCTCTAAAATCGCCATTGTTGGTGTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: HSINMHIFPSTS*VALKSPLLVSY Trigger: GTAGGACACCAACAATGGCGATTTTAGAGCTACCCAGCTTGTGGAGGGAAAGATGTGCATGTTTATGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR CCA 72 bp | TCTGTAGGTTTTCCTCTGACTTTCCCACACATACTGTaGATAGTGTGTGTGTGTGTGTGTGTGCGCGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: SVGFPLTFPHIL*IVCVCVCVRVY Trigger: ATACACGCGCACACACACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR CCA 72 bp | AAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTaGGATCAGGGGGAACTCTTAATAAATTCTGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: KGNPSEEMILWR*DQGELLINSVG Trigger: ACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| 3UTR GCA 72 bp | TCAGGGAAATATCAGTGTTTGTTTTGTTGTTTGTTTTaGAGTGCAGTGGGTGCTATCCTCTCACACAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: SGKYQCLFCCLF*SAVGAILSHRF Trigger: GAACCTGTGTGAGAGGATAGCACCCACTGCACTGCAAAACAAACAACAAAACAAACACTGATATTTCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR GCA 72 bp | GAAATATCAGTGTTTGTTTTGTTGTTTGTTTTGCAGTaGAGTGGGTGCTATCCTCTCACACAGGTTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: EISVFVLLFVLQ*SGCYPLTQVQQ Trigger: TTGCTGAACCTGTGTGAGAGGATAGCACCCACTGCACTGCAAAACAAACAACAAAACAAACACTGATATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGTTTTAAGTGAACTGTaGCCATTTGATTGCAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: LMHLICNFLQEKGPESVRVLSEL*PFDCRS Trigger: TGACCTGCAATCAAATGGCAACAGTTCACTTAAAAC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAACTAACAGTCAAACCATaGAGCTTAAAAGTTTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PVKVTSLEFAGLALSYVKLTVKP*SLKVLW Trigger: CCACAAAACTTTTAAGCTCAATGGTTTGACTGTTAG...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| 3UTR GCA 72 bp | ATTATTAATCCGATAAAGAACACAAAATCTTTGGGTTaGTTTGGTAACTATGACTGGTACTCAACAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: IINPIKNTKSLG*FGNYDWYSTGT Trigger: TGTTCCTGTTGAGTACCAGTCATAGTTACCAAAGCAACCCAAAGATTTTGTGTTCTTTATCGGATTAATAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| CDS-3UTR GCA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGGAAGGACTGCCCAAATaGCTCTCTGAGCTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLGSLASQLVVSTVAVRREGLPK*LSELLQ Trigger: CTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTC...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR TCA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGCATGGGTCGTTTCTGTaGGCTCCTTGGTCAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLGSLASQLVVSTVAVRRHGSFL*APWSVS Trigger: AGAGACTGACCAAGGAGCTCACAGAAACGACCCATG...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGACGGTGCACTCGCTCATaGTGCTCTGTCAGTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LLSRCPWMSSLMEGEPFRRCTRS*CSVSAP Trigger: GGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCG...TCTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | GTTGTGAGCACTGTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCTGTCAGTGCCCCCTTaGTATGTTCTAGCTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VVSTVAVRRQQAADNLVELSVPP*YVLAGF Trigger: AAACCCAGCTAGAACATACCAAGGGGGCACTGACAG...CTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | GTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCCACGGTTAACCACTGAGATGCTGATGTaGCTATCACTGAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VAVRRQQAADNLVEPRLTTEMLM*LSLRLM Trigger: CATCAACCTCAGTGATAGCCACATCAGCATCTCAGT...GGTTAACCGTGGCTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTACCACAGCCCGGCTCTaGTTCAGCTCATTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLAEPMPLDEFTHGRGTLTTARL*FSSFCI Trigger: GATGCAGAATGAGCTGAAGCAGAGCCGGGCTGTGGT...AAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTGCACTCGCTCATGCTaGTCTGTCAGTGCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNPSEEMILWRWDQGELCTRSC*SVSAPL Trigger: CAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCA...GAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCGGTGCACTCGCTCATaGTGCTCTGTCAGTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYRCTRS*CSVSAP Trigger: GGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAAGGCCAACTCTCGGGCTaGTGCTCTTTGACGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: WKGNPSEEMILWRWDQGEGQLSG*CSLTRQ Trigger: CTGTCTCGTCAAAGAGCAGCAGCCCGAGAGTTGGCC...TTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCTCAGTGTCGCAATCTaGTCCCGTTTGGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAEPMPLDEFTHGRGTLLSVAI*SRLVLS Trigger: GCTGAGCACCAAACGGGAGCAGATTGCGACACTGAG...AAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGCAAGTTTGCCTTTGCTaGGTCGGGACTGCTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQQVCLC*VGTAHG Trigger: ACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTG...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGTTGGATGCAGACTCCTaGAGAAGTGTTTCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLLDADS*RSVSSR Trigger: TCGGGAGGAAACACTTCTTCAGGAGTCTGCATCCAA...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| CDS-3UTR TCA 90 bp | GTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCCACGGTTAACCAAATGTTCAACTCACTaGATAAGTCAGACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAVRRQQAADNLVEPRLTKCSTH*ISQTQG Trigger: ACCCTGTGTCTGACTTATTCAGTGAGTTGAACATTT...GGTTAACCGTGGCTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGCATTGCTCTCAGGGATaGGAAGGTTGCAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQHCSQG*EGCSIF Trigger: GAAGATGCTGCAACCTTCTCATCCCTGAGAGCAATG...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTGGGACTGCTCTGTGAGCCGGTaGACTCGCTCATGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGELLINSVGRKPLKSWDCSVSR*TRSCCS Trigger: AGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCA...GTCCCAGGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGTTCATCGCATCTTGTTaGAAACATTGCTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLGSLASQLVVSTVAVRRFIASC*KHCSQG Trigger: TCCCTGAGAGCAATGTTTGCAACAAGATGCGATGAA...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTACTGAGGGCAATGTCCGGACTGACCGTTGGGTAGTCTTGCCTCCCAGCGTCAGGGCGAGTTTTTaGTGGATAGCCATTCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLTEGNVRTDRWVVLPPSVRASF*WIAIRN Trigger: ATTGCGAATGGCTATCCAGCAAAAACTCGCCCTGAC...GCTGGGAGGCAAGACTACCCAACGGTCAGTCCGGACATTGCCCTCAGTAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGTTGCTGCGTCGGGACTaGTCATGGTCAAACTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLLLRRD*SWSNSK Trigger: CTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAA...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| CDS-3UTR TCA 90 bp | TGGAGGTGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGGCCCAAATGCCTCTCTaGGCTGCTCCAGCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRWDQGELLINSVGRKPLAQMPL*AAPALV Trigger: AACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGC...CAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCACCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR TCA 90 bp | TTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGACATCCTCAGCAAACTTaGGCCCATCTACTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSRCPWMSSLMEGEPFRHPQQT*AHLLRC Trigger: GCATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATG...TCTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCCACGGTTAACCTATAGTAGTCCAACATaGCTCTATTGGGAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAVRRQQAADNLVEPRLTYSSPT*LYWEFH Trigger: ATGAAACTCCCAATAGAGTCATGTTGGACTACTATA...GGTTAACCGTGGCTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTGCTCTGTGAGCCGGTaGACTCGCTCATGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYCSVSR*TRSCCS Trigger: AGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| CDS-3UTR CCA 90 bp | GGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTTGTCCTTATCAATCATaGGGGCCAACTCTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEPFRRNDSVEVGSGGTLCPYQS*GPTLGL Trigger: CAGCCCGAGAGTTGGCCCCCATGATTGATAAGGACA...AAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGCCCAAATGCCTCTCTaGGCTGCTCCAGCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYAQMPL*AAPALV Trigger: AACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| CDS-3UTR TCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGATCCAAAACTGGAGATaGTGGTGGGGCAGTAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQIQNWR*WWGSNN Trigger: GTTATTACTGCCCCACCATCATCTCCAGTTTTGGAT...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR TCA 90 bp | ATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGACCTTCTGCAGATGCTTaGTTTGGTCCCGGATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: MEGEPFRRNDSVEVGSGGPSADA*FGPGLW Trigger: CCATAATCCGGGACCAAATCAAGCATCTGCAGAAGG...TCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATACCACAGCCCGGCTCTaGTTCAGCTCATTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYTTARL*FSSFCI Trigger: GATGCAGAATGAGCTGAAGCAGAGCCGGGCTGTGGT...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| CDS-3UTR GCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGATGCCAGTCATCTTTTaGAACTCCTTCTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQMPVIF*NSFSMW Trigger: CCACATGGAGAAGGAGTTGCAAAAGATGACTGGCAT...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGTATTCATTGGCTCTTTaGGAATATCACTGGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGSLASQLVVSTVAVRRYSLAL*EYHWYP Trigger: TGGATACCAGTGATATTCGCAAAGAGCCAATGAATA...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGGCCACTTCAGCTGTCTaGTTATTGGCTTTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQATSAV*LLAFNT Trigger: AGTGTTGAAAGCCAATAAGCAGACAGCTGAAGTGGC...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | ATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGATTCCAAGTTTGCCTTTaGTGCGTCGGGACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MEGEPFRRNDSVEVGSGGFQVCL*CVGTAH Trigger: ATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAA...TCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | TGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAATGCTCTTTCCAAGTTTaGCTTTGCTGCGTCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: WKGNPSEEMILWRWDQGECSFQV*LCCVGT Trigger: AGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCA...TTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | TGGAGGTGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGGCCTGGATCTTCTCATaGGTCGTTTCTGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRWDQGELLINSVGRKPLAWIFS*VVSVSS Trigger: GGAGCTCACAGAAACGACCCATGAGAAGATCCAGGC...CAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCACCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGCTCTCATTTTCTGCCTaGACATTTGTAACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLLSFSA*TFVTTA Trigger: GGCTGTGGTTACAAATGTCCAGGCAGAAAATGAGAG...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGCCTTCGTATTCAACCTaGTTCTGCTTCAATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLPSYST*FCFNVD Trigger: GTCCACATTGAAGCAGAACCAGGTTGAATACGAAGG...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGACTGAGATGCTGATGTaGCTATCACTGAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLTEMLM*LSLRLM Trigger: CATCAACCTCAGTGATAGCCACATCAGCATCTCAGT...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCCGTCATACTGTTGCTTaGGAGTCAGTTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGNPSEEMILWRWDQGELRHTVA*ESVSPP Trigger: TGGAGGAGAAACTGACTCTCAAGCAACAGTATGACG...GAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGACATCCTGGGCTGTATTaGGGGTGTTGTGATTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MEGEPFRRNDSVEVGSGGHPGLY*GCCDFR Trigger: ACGAAAATCACAACACCCTCAATACAGCCCAGGATG...TCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGAGAGCCTCTCATTTTCTaGCTGGACATTTGTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSRCPWMSSLMEGEPFREPLIF*LDICNH Trigger: GTGGTTACAAATGTCCAGGCAGAAAATGAGAGGCTC...TCTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGACGGCCACTCTATATTTaGACTCAAGGATCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSRCPWMSSLMEGEPFRRPLYI*TQGSLS Trigger: GCTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCG...TCTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTACTGCCTTCTGCAGATaGTTGATTTGGTCCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GEPFRRNDSVEVGSGGTLTAFCR*LIWSRI Trigger: AATCCGGGACCAAATCAAGCATCTGCAGAAGGCAGT...AAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTGGCCAACTCTCGGGCTaGTGCTCTTTGACGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCGQLSG*CSLTRQ Trigger: CTGTCTCGTCAAAGAGCAGCAGCCCGAGAGTTGGCC...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTGGGACTCTGCTCCCGTTTGGTaGTCAGCAAGGACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGELLINSVGRKPLKSWDSAPVW*SARTSV Trigger: AACTGAAGTCCTTGCTGAGCACCAAACGGGAGCAGA...GTCCCAGGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAAATTGGCTTTCAACACTaGCCTCAGTGTCGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKGNPSEEMILWRWDQGEIGFQH*PQCRNL Trigger: CAGATTGCGACACTGAGGGCAGTGTTGAAAGCCAAT...TTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTGCTGCTAACTGTCTCTaGATCTCATCCAACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEPFRRNDSVEVGSGGTLAANCL*ISSNCV Trigger: CACACAGTTGGATGAGATGCAGAGACAGTTAGCAGC...AAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCAAGTTTGCCTTTGCTaGGTCGGGACTGCTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYQVCLC*VGTAHG Trigger: ACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGACTCTCATTTTCTGCCTaGACATTTGTAACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSRCPWMSSLMEGEPFRLSFSA*TFVTTA Trigger: GGCTGTGGTTACAAATGTCCAGGCAGAAAATGAGAG...TCTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTGGGTTTGTGACTCCTaGAGGTTGGCCAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KGNPSEEMILWRWDQGELWVCDS*RLARRI Trigger: TATTCTTCTGGCCAACCTCCAGGAGTCACAAACCCA...GAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTCAGCTGTCTGCTTATTaGCTTTCAACACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEPFRRNDSVEVGSGGTLQLSAY*LSTLPS Trigger: TGAGGGCAGTGTTGAAAGCCAATAAGCAGACAGCTG...AAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCGTCGGGACTGCTCATaGTCAAACTCTAAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHSWKGNPSEEMILWRWDRRDCS*SNSKSS Trigger: GGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACG...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCATCCTCAGCAAACTTaGGCCCATCTACTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYHPQQT*AHLLRC Trigger: GCATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCCTTCTGCAGATGCTTaGTTTGGTCCCGGATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYPSADA*FGPGLW Trigger: CCATAATCCGGGACCAAATCAAGCATCTGCAGAAGG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTTCTCATCCAACTGTGTaGCATATTCATCGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLAEPMPLDEFTHGRGTLSHPTV*HIHRIL Trigger: CAAGATGCGATGAATATGTCACACAGTTGGATGAGA...AAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTCTGCTCCCGTTTGGTaGTCAGCAAGGACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYSAPVW*SARTSV Trigger: AACTGAAGTCCTTGCTGAGCACCAAACGGGAGCAGA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTTGCTGCGTCGGGACTaGTCATGGTCAAACTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYLLRRD*SWSNSK Trigger: CTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGATGCAGATGCTTGATTTaGTCCCGGATTATGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MEGEPFRRNDSVEVGSGGCRCLI*SRIMAL Trigger: CAATGCCATAATCCGGGACCAAATCAAGCATCTGCA...TCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGAAGGGCGAGTTTTTGCTaGATAGCCATTCGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSRCPWMSSLMEGEPFRRASFC*IAIRNK Trigger: TTTATTGCGAATGGCTATCCAGCAAAAACTCGCCCT...TCTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCGTCATACTGTTGCTTaGGAGTCAGTTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYRHTVA*ESVSPP Trigger: TGGAGGAGAAACTGACTCTCAAGCAACAGTATGACG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGAAGGACTGCCCAAATaGCTCTCTGAGCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVREGLPK*LSELLQ Trigger: CTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTTGCTTCAGCTCATTCTaGATCTCCAAGATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLAEPMPLDEFTHGRGTLCFSSF*ISKILF Trigger: AAACAAGATCTTGGAGATGCAGAATGAGCTGAAGCA...AAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGTCAGGGCGAGTTTTTaGTGGATAGCCATTCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYVRASF*WIAIRN Trigger: ATTGCGAATGGCTATCCAGCAAAAACTCGCCCTGAC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAGCCTGGATCTTCTCATaGGTCGTTTCTGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKAWIFS*VVSVSS Trigger: GGAGCTCACAGAAACGACCCATGAGAAGATCCAGGC...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAAGGTTCTGCTTCAATGTaGACACTAGTTTCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: WKGNPSEEMILWRWDQGEGSASM*TLVSAM Trigger: CATTGCAGAAACTAGTGTCCACATTGAAGCAGAACC...TTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTGGGTTTGTGACTCCTaGAGGTTGGCCAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYWVCDS*RLARRI Trigger: TATTCTTCTGGCCAACCTCCAGGAGTCACAAACCCA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTGTCCTTATCAATCATaGGGGCCAACTCTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCCPYQS*GPTLGL Trigger: CAGCCCGAGAGTTGGCCCCCATGATTGATAAGGACA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCAGCTGTCTGCTTATTaGCTTTCAACACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYQLSAY*LSTLPS Trigger: TGAGGGCAGTGTTGAAAGCCAATAAGCAGACAGCTG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTTGGATGCAGACTCCTaGAGAAGTGTTTCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCLDADS*RSVSSR Trigger: TCGGGAGGAAACACTTCTTCAGGAGTCTGCATCCAA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAACATCCTCAGCAAACTTaGGCCCATCTACTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKHPQQT*AHLLRC Trigger: GCATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATG...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | TGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCGTATTGAGGGTGTTGTaGTTTTCGTTGGCTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WDQGELLINSVGRKPLKSVLRVL*FSLAMP Trigger: TGGCATAGCCAACGAAAATCACAACACCCTCAATAC...GGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTGGATAGAGAAGGACTaGCCAAATGCCTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCWIEKD*PNASLS Trigger: GCTCAGAGAGGCATTTGGGCAGTCCTTCTCTATCCA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGAGCCTCTCATTTTCTaGCTGGACATTTGTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYEPLIF*LDICNH Trigger: GTGGTTACAAATGTCCAGGCAGAAAATGAGAGGCTC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGGTGGACACTAGTTTCTaGAATGTGATATTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQVDTSF*NVIFSS Trigger: AGAAGAAAATATCACATTGCAGAAACTAGTGTCCAC...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | ATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGATATTCAACCTGGTTCTaGTTCAATGTGGACACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MEGEPFRRNDSVEVGSGGYSTWF*FNVDTS Trigger: ACTAGTGTCCACATTGAAGCAGAACCAGGTTGAATA...TCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
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| CDS-3UTR GCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACTGCACTCGCTCATGCTaGTCTGTCAGTGCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHCTRSC*SVSAPL Trigger: CAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCA...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
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| CDS-3UTR GCA 90 bp | CAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTGGGACATCTCTTTGCTGTTTTaGAAGCCCCTCATAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QGELLINSVGRKPLKSWDISLLF*KPLIAL Trigger: CAATGCTATGAGGGGCTTGCAAAACAGCAAAGAGAT...GTCCCAGGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGGCCAACTCTCGGGCTaGTGCTCTTTGACGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHGQLSG*CSLTRQ Trigger: CTGTCTCGTCAAAGAGCAGCAGCCCGAGAGTTGGCC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGCCACTTCAGCTGTCTaGTTATTGGCTTTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYATSAV*LLAFNT Trigger: AGTGTTGAAAGCCAATAAGCAGACAGCTGAAGTGGC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAATGCTCTTTCCAAGTTTaGCTTTGCTGCGTCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKCSFQV*LCCVGT Trigger: AGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCA...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGCCTGGATCTTCTCATaGGTCGTTTCTGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRAWIFS*VVSVSS Trigger: GGAGCTCACAGAAACGACCCATGAGAAGATCCAGGC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGATGGCATCTTCTAGTTaGCTATTCAGTAATACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLMASSS*LFSNTV Trigger: AACAGTATTACTGAATAGCCAACTAGAAGATGCCAT...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTTCCCAAGAGGCCCATaGATATGTCCATTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYFPRGP*ICPFIL Trigger: CAAGATGAATGGACATATCCATGGGCCTCTTGGGAA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTTCCCAAGAGGCCCATaGATATGTCCATTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WDQGELLINSVGRKPLKSFPRGP*ICPFIL Trigger: CAAGATGAATGGACATATCCATGGGCCTCTTGGGAA...GGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAACTGTCAGTGCCCCCTTaGTATGTTCTAGCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKLSVPP*YVLAGF Trigger: AAACCCAGCTAGAACATACCAAGGGGGCACTGACAG...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | TGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCATGACACACCCCTCCTaGATAATCTTGGCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WDQGELLINSVGRKPLKSMTHPS*IILATK Trigger: TTTTGTCGCCAAGATTATCCAGGAGGGGTGTGTCAT...GGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAAGTCTTAGTTGGACTTaGCTCTTTACTAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MEGEPFRRNDSVEVGSGGSLSWT*LFTSLC Trigger: ACAGAGACTAGTAAAGAGCCAAGTCCAACTAAGACT...TCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGGTTGTAGATATTCATTaGCTCTTTGCGAATATCACT | + |
|
Preference number: 4 (lower is better) Translates to: AHCELECGCSLLRAMSGLVVDIH*LFANIT Trigger: AGTGATATTCGCAAAGAGCCAATGAATATCTACAAC...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTGCAGATGCTTGATTTaGTCCCGGATTATGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYCRCLI*SRIMAL Trigger: CAATGCCATAATCCGGGACCAAATCAAGCATCTGCA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGCCCAAATGCCTCTCTaGGCTGCTCCAGCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHAQMPL*AAPALV Trigger: AACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATTTTTCCCTCTCTACCTaGATAAGCTGCTGCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHSWKGNPSEEMILWRWDFSLST*ISCCFN Trigger: ATTGAAGCAGCAGCTTATTCAGGTAGAGAGGGAAAA...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCCCGGATTATGGCATTaGGGTTGTAGATATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VHSWKGNPSEEMILWRWDPGLWH*GCRYSL Trigger: CAATGAATATCTACAACCTCAATGCCATAATCCGGG...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR TCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCATTGCTCTCAGGGATaGGAAGGTTGCAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRHCSQG*EGCSIF Trigger: GAAGATGCTGCAACCTTCTCATCCCTGAGAGCAATG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTCTCATCCAACTGTGTaGCATATTCATCGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYSHPTV*HIHRIL Trigger: CAAGATGCGATGAATATGTCACACAGTTGGATGAGA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTGCACTCGCTCATGCTaGTCTGTCAGTGCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSCTRSC*SVSAPL Trigger: CAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTGGGACGATTTTCGTTGGCTATaGCAGTCATCTTTTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QGELLINSVGRKPLKSWDDFRWL*QSSFAT Trigger: AGTTGCAAAAGATGACTGGCATAGCCAACGAAAATC...GTCCCAGGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAGCTGCTAACTGTCTCTaGATCTCATCCAACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKAANCL*ISSNCV Trigger: CACACAGTTGGATGAGATGCAGAGACAGTTAGCAGC...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTTCCAAGTTTGCCTTTaGTGCGTCGGGACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRFQVCL*CVGTAH Trigger: ATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGGTTCTGCTTCAATGTaGACACTAGTTTCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYGSASM*TLVSAM Trigger: CATTGCAGAAACTAGTGTCCACATTGAAGCAGAACC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAATGGGTTTGTGACTCCTaGAGGTTGGCCAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKWVCDS*RLARRI Trigger: TATTCTTCTGGCCAACCTCCAGGAGTCACAAACCCA...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCTGTCAGTGCCCCCTTaGTATGTTCTAGCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRLSVPP*YVLAGF Trigger: AAACCCAGCTAGAACATACCAAGGGGGCACTGACAG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTCAGCTGTCTGCTTATTaGCTTTCAACACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCQLSAY*LSTLPS Trigger: TGAGGGCAGTGTTGAAAGCCAATAAGCAGACAGCTG...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCGTCATACTGTTGCTTaGGAGTCAGTTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRRHTVA*ESVSPP Trigger: TGGAGGAGAAACTGACTCTCAAGCAACAGTATGACG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCATCCTGGGCTGTATTaGGGGTGTTGTGATTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRHPGLY*GCCDFR Trigger: ACGAAAATCACAACACCCTCAATACAGCCCAGGATG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTGAAGGACTGCCCAAATaGCTCTCTGAGCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSEGLPK*LSELLQ Trigger: CTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTC...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTATTCAACCTGGTTCTaGTTCAATGTGGACACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYYSTWF*FNVDTS Trigger: ACTAGTGTCCACATTGAAGCAGAACCAGGTTGAATA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTATGCCAGTCATCTTTTaGAACTCCTTCTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCMPVIF*NSFSMW Trigger: CCACATGGAGAAGGAGTTGCAAAAGATGACTGGCAT...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCTCAGTGTCGCAATCTaGTCCCGTTTGGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSLSVAI*SRLVLS Trigger: GCTGAGCACCAAACGGGAGCAGATTGCGACACTGAG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGATTGGCTTTCAACACTaGCCTCAGTGTCGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRIGFQH*PQCRNL Trigger: CAGATTGCGACACTGAGGGCAGTGTTGAAAGCCAAT...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTATGACACACCCCTCCTaGATAATCTTGGCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCMTHPS*IILATK Trigger: TTTTGTCGCCAAGATTATCCAGGAGGGGTGTGTCAT...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATAGTCTTAGTTGGACTTaGCTCTTTACTAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYSLSWT*LFTSLC Trigger: ACAGAGACTAGTAAAGAGCCAAGTCCAACTAAGACT...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCGTCGGGACTGCTCATaGTCAAACTCTAAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHRRDCS*SNSKSS Trigger: GGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCATGGGTCGTTTCTGTaGGCTCCTTGGTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSHGSFL*APWSVS Trigger: AGAGACTGACCAAGGAGCTCACAGAAACGACCCATG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAATTTTCCCTCTCTACCTaGATAAGCTGCTGCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKFSLST*ISCCFN Trigger: ATTGAAGCAGCAGCTTATTCAGGTAGAGAGGGAAAA...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGTATTGAGGGTGTTGTaGTTTTCGTTGGCTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRVLRVL*FSLAMP Trigger: TGGCATAGCCAACGAAAATCACAACACCCTCAATAC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTCCCGGATTATGGCATTaGGGTTGTAGATATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCPGLWH*GCRYSL Trigger: CAATGAATATCTACAACCTCAATGCCATAATCCGGG...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCATTGCTCTCAGGGATaGGAAGGTTGCAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHHCSQG*EGCSIF Trigger: GAAGATGCTGCAACCTTCTCATCCCTGAGAGCAATG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAATTCATCGCATCTTGTTaGAAACATTGCTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKFIASC*KHCSQG Trigger: TCCCTGAGAGCAATGTTTGCAACAAGATGCGATGAA...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCCTTCGTATTCAACCTaGTTCTGCTTCAATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRPSYST*FCFNVD Trigger: GTCCACATTGAAGCAGAACCAGGTTGAATACGAAGG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTGGGACATGGCATCTTCTAGTTaGCTATTCAGTAATACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGELLINSVGRKPLKSWDMASSS*LFSNTV Trigger: AACAGTATTACTGAATAGCCAACTAGAAGATGCCAT...GTCCCAGGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTTCCCAAGAGGCCCATaGATATGTCCATTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRFPRGP*ICPFIL Trigger: CAAGATGAATGGACATATCCATGGGCCTCTTGGGAA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTGTTGTGATTTTCGTTaGCTATGCCAGTCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYCCDFR*LCQSSF Trigger: AAAAGATGACTGGCATAGCCAACGAAAATCACAACA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTGTTGTGATTTTCGTTaGCTATGCCAGTCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WDQGELLINSVGRKPLKSCCDFR*LCQSSF Trigger: AAAAGATGACTGGCATAGCCAACGAAAATCACAACA...GGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGATGACACACCCCTCCTaGATAATCTTGGCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRMTHPS*IILATK Trigger: TTTTGTCGCCAAGATTATCCAGGAGGGGTGTGTCAT...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTGTCCTTATCAATCATaGGGGCCAACTCTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSCPYQS*GPTLGL Trigger: CAGCCCGAGAGTTGGCCCCCATGATTGATAAGGACA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAAGGGCGAGTTTTTGCTaGATAGCCATTCGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKRASFC*IAIRNK Trigger: TTTATTGCGAATGGCTATCCAGCAAAAACTCGCCCT...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCGTCGGGACTGCTCATaGTCAAACTCTAAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSRRDCS*SNSKSS Trigger: GGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| 3UTR CAA 72 bp | CTGATAATCTTAGTTCAATCCCTGGGATCCATACAGTaGTGGGAGAGAAGCAACTTCTGTAGGTTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIILVQSLGSIQ*WERSNFCRFSS Trigger: AGAGGAAAACCTACAGAAGTTGCTTCTCTCCCACAACTGTATGGATCCCAGGGATTGAACTAAGATTATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTTGGATGCAGACTCCTaGAGAAGTGTTTCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSLDADS*RSVSSR Trigger: TCGGGAGGAAACACTTCTTCAGGAGTCTGCATCCAA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCATCCTGGGCTGTATTaGGGGTGTTGTGATTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHHPGLY*GCCDFR Trigger: ACGAAAATCACAACACCCTCAATACAGCCCAGGATG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTGGATAGAGAAGGACTaGCCAAATGCCTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSWIEKD*PNASLS Trigger: GCTCAGAGAGGCATTTGGGCAGTCCTTCTCTATCCA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGTGGACACTAGTTTCTaGAATGTGATATTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYVDTSF*NVIFSS Trigger: AGAAGAAAATATCACATTGCAGAAACTAGTGTCCAC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGATCTCTTTGCTGTTTTaGAAGCCCCTCATAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRISLLF*KPLIAL Trigger: CAATGCTATGAGGGGCTTGCAAAACAGCAAAGAGAT...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAGATTTTCGTTGGCTATaGCAGTCATCTTTTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKDFRWL*QSSFAT Trigger: AGTTGCAAAAGATGACTGGCATAGCCAACGAAAATC...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTCTGCTCCCGTTTGGTaGTCAGCAAGGACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSSAPVW*SARTSV Trigger: AACTGAAGTCCTTGCTGAGCACCAAACGGGAGCAGA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTTGCTGCGTCGGGACTaGTCATGGTCAAACTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSLLRRD*SWSNSK Trigger: CTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTGCTCTTTCCAAGTTTaGCTTTGCTGCGTCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSCSFQV*LCCVGT Trigger: AGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACTCAGCTACTTTACGGTaGATAGAGAAGGACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHSATLR*IEKDCP Trigger: TGGGCAGTCCTTCTCTATCCACCGTAAAGTAGCTGA...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGGTTCTGCTTCAATGTaGACACTAGTTTCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRGSASM*TLVSAM Trigger: CATTGCAGAAACTAGTGTCCACATTGAAGCAGAACC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATATGGCATCTTCTAGTTaGCTATTCAGTAATACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYMASSS*LFSNTV Trigger: AACAGTATTACTGAATAGCCAACTAGAAGATGCCAT...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTAGTCTTAGTTGGACTTaGCTCTTTACTAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCSLSWT*LFTSLC Trigger: ACAGAGACTAGTAAAGAGCCAAGTCCAACTAAGACT...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGAGGGCGAGTTTTTGCTaGATAGCCATTCGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRRASFC*IAIRNK Trigger: TTTATTGCGAATGGCTATCCAGCAAAAACTCGCCCT...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTATAGTAGTCCAACATaGCTCTATTGGGAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCYSSPT*LYWEFH Trigger: ATGAAACTCCCAATAGAGTCATGTTGGACTACTATA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACATCCAAAACTGGAGATaGTGGTGGGGCAGTAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHIQNWR*WWGSNN Trigger: GTTATTACTGCCCCACCATCATCTCCAGTTTTGGAT...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTGCTTCAGCTCATTCTaGATCTCCAAGATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRCFSSF*ISKILF Trigger: AAACAAGATCTTGGAGATGCAGAATGAGCTGAAGCA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGAGCCTCTCATTTTCTaGCTGGACATTTGTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHEPLIF*LDICNH Trigger: GTGGTTACAAATGTCCAGGCAGAAAATGAGAGGCTC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCGGCCACTCTATATTTaGACTCAAGGATCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHRPLYI*TQGSLS Trigger: GCTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAATATTCATTGGCTCTTTaGGAATATCACTGGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVKVTSLEFAGLALSYVKYSLAL*EYHWYP Trigger: TGGATACCAGTGATATTCGCAAAGAGCCAATGAATA...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTACTGCCTTCTGCAGATaGTTGATTTGGTCCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSTAFCR*LIWSRI Trigger: AATCCGGGACCAAATCAAGCATCTGCAGAAGGCAGT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTATTGGCTTTCAACACTaGCCTCAGTGTCGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSIGFQH*PQCRNL Trigger: CAGATTGCGACACTGAGGGCAGTGTTGAAAGCCAAT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGCCACTTCAGCTGTCTaGTTATTGGCTTTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHATSAV*LLAFNT Trigger: AGTGTTGAAAGCCAATAAGCAGACAGCTGAAGTGGC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTGCTGCTAACTGTCTCTaGATCTCATCCAACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSAANCL*ISSNCV Trigger: CACACAGTTGGATGAGATGCAGAGACAGTTAGCAGC...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTCAGCTACTTTACGGTaGATAGAGAAGGACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSSATLR*IEKDCP Trigger: TGGGCAGTCCTTCTCTATCCACCGTAAAGTAGCTGA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACTGCAGATGCTTGATTTaGTCCCGGATTATGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHCRCLI*SRIMAL Trigger: CAATGCCATAATCCGGGACCAAATCAAGCATCTGCA...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTGTATTGAGGGTGTTGTaGTTTTCGTTGGCTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSVLRVL*FSLAMP Trigger: TGGCATAGCCAACGAAAATCACAACACCCTCAATAC...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCCCGGATTATGGCATTaGGGTTGTAGATATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHPGLWH*GCRYSL Trigger: CAATGAATATCTACAACCTCAATGCCATAATCCGGG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCGGCCACTCTATATTTaGACTCAAGGATCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSRPLYI*TQGSLS Trigger: GCTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTATGCCAGTCATCTTTTaGAACTCCTTCTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSMPVIF*NSFSMW Trigger: CCACATGGAGAAGGAGTTGCAAAAGATGACTGGCAT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTATTCATTGGCTCTTTaGGAATATCACTGGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRYSLAL*EYHWYP Trigger: TGGATACCAGTGATATTCGCAAAGAGCCAATGAATA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCTCTCATTTTCTGCCTaGACATTTGTAACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSLSFSA*TFVTTA Trigger: GGCTGTGGTTACAAATGTCCAGGCAGAAAATGAGAG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTACTGAGATGCTGATGTaGCTATCACTGAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSTEMLM*LSLRLM Trigger: CATCAACCTCAGTGATAGCCACATCAGCATCTCAGT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTGTTGTAGATATTCATTaGCTCTTTGCGAATATCACT | + |
|
Preference number: 4 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCVVDIH*LFANIT Trigger: AGTGATATTCGCAAAGAGCCAATGAATATCTACAAC...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACAAATGTTCAACTCACTaGATAAGTCAGACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHKCSTH*ISQTQG Trigger: ACCCTGTGTCTGACTTATTCAGTGAGTTGAACATTT...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTTTTCCCTCTCTACCTaGATAAGCTGCTGCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSFSLST*ISCCFN Trigger: ATTGAAGCAGCAGCTTATTCAGGTAGAGAGGGAAAA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTCTCATCCAACTGTGTaGCATATTCATCGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSSHPTV*HIHRIL Trigger: CAAGATGCGATGAATATGTCACACAGTTGGATGAGA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTATCTCTTTGCTGTTTTaGAAGCCCCTCATAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSISLLF*KPLIAL Trigger: CAATGCTATGAGGGGCTTGCAAAACAGCAAAGAGAT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTTCATCGCATCTTGTTaGAAACATTGCTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSFIASC*KHCSQG Trigger: TCCCTGAGAGCAATGTTTGCAACAAGATGCGATGAA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CCA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGTTGTAGATATTCATTaGCTCTTTGCGAATATCACT | + |
|
Preference number: 4 (lower is better) Translates to: LMHLICNFLQEKGPESVRVVDIH*LFANIT Trigger: AGTGATATTCGCAAAGAGCCAATGAATATCTACAAC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTAAATGTTCAACTCACTaGATAAGTCAGACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSKCSTH*ISQTQG Trigger: ACCCTGTGTCTGACTTATTCAGTGAGTTGAACATTT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACTATAGTAGTCCAACATaGCTCTATTGGGAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHYSSPT*LYWEFH Trigger: ATGAAACTCCCAATAGAGTCATGTTGGACTACTATA...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTGCTTCAGCTCATTCTaGATCTCCAAGATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSCFSSF*ISKILF Trigger: AAACAAGATCTTGGAGATGCAGAATGAGCTGAAGCA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTATTCAACCTGGTTCTaGTTCAATGTGGACACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSYSTWF*FNVDTS Trigger: ACTAGTGTCCACATTGAAGCAGAACCAGGTTGAATA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTGATTTTCGTTGGCTATaGCAGTCATCTTTTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSDFRWL*QSSFAT Trigger: AGTTGCAAAAGATGACTGGCATAGCCAACGAAAATC...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| 3UTR CAA 72 bp | GTTATTTCCTTAGCAGTGGGGTGCCTTTCACAAATATaGAGTGCACAGAAACAAACATATGACATAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VISLAVGCLSQI*SAQKQTYDIRI Trigger: AATCCTTATGTCATATGTTTGTTTCTGTGCACTCAATATTTGTGAAAGGCACCCCACTGCTAAGGAAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTGTGGACACTAGTTTCTaGAATGTGATATTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEIDHTKVYASFYSSELSVDTSF*NVIFSS Trigger: AGAAGAAAATATCACATTGCAGAAACTAGTGTCCAC...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| 3UTR CAA 72 bp | GGGTCTATTATTAATCCGATAAAGAACACAAAATCTTaGGGTTGCTTTGGTAACTATGACTGGTACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSIINPIKNTKS*GCFGNYDWYST Trigger: TGTTGAGTACCAGTCATAGTTACCAAAGCAACCCAAAGATTTTGTGTTCTTTATCGGATTAATAATAGACCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGGGATCATCAGGCCCCTaGAGGCTGCCACTTCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLGSLASQLVVSTVAVRRGSSGP*RLPLRV Trigger: TACTCGAAGTGGCAGCCTCAAGGGGCCTGATGATCC...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTGAGCACTGTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGGAGCTGCTCCAGCTCTaGTTTGAGGCCGTCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSTVAVRRQQAADNLVEELLQL*FEAVIL Trigger: GAGTATGACGGCCTCAAACAAGAGCTGGAGCAGCTC...CTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGTGGCTATCACTGAGGTaGATGTACTGGGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLGSLASQLVVSTVAVRRWLSLR*MYWDSS Trigger: GGAGCTGTCCCAGTACATCAACCTCAGTGATAGCCA...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS CCA 90 bp | GCCCTGACTATGCAGGAGGTAAGTGTCTATGGTAGGCACGGTGTCTaGCGCCTCCCCACTTACTTTAGGGCTGCCGATCTTGCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALTMQEVSVYGRHGV*RLPTYFRAADLALS Trigger: GGAAAGAGCAAGATCGGCAGCCCTAAAGTAAGTGGGGAGGCGCCAGACACCGTGCCTACCATAGACACTTACCTCCTGCATAGTCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS-3UTR CAA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGCCATCCTCAGCAAACTaGAGCCCATCTACTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLGSLASQLVVSTVAVRRPSSAN*SPSTEM Trigger: CATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATGG...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS GCA 90 bp | ACTTTACGGTGGATAGAGAAGGACTGCCCAAATGCCTCTCTGAGCTaGTCCAGCTCTTGTTTGAGGCCGTCATACTCGGCCTCCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLRWIEKDCPNASLS*SSSCLRPSYSASSS Trigger: CGAGCTGGAGGCCGAGTATGACGGCCTCAAACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTCTCTATCCACCGTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS GCA 90 bp | CCCCTCATAGCATTGACATGCTCTGTGAGCCGGTGCACTCGCTCATaGTGCTCTGTCAGTGCCCCCTTGGTATGTTCTAGCTGGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLIALTCSVSRCTRS*CSVSAPLVCSSWVC Trigger: ACAAACCCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCATGTCAATGCTATGAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS GCA 90 bp | CTGCCGATCTTGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGACTaGTCATGGTCAAACTCTAAGTCCTCCAGCCTCTGTGTCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPILLFPSLPLLRRD*SWSNSKSSSLCVRA Trigger: CGCCCTGACACAGAGGCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCCACGGTTAACCATTCATCGCATCTTGTaGCAAACATTGCTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAVRRQQAADNLVEPRLTIHRIL*QTLLSG Trigger: CCCTGAGAGCAATGTTTGCAACAAGATGCGATGAAT...GGTTAACCGTGGCTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS TCA 90 bp | TTGTCCTTATCAATCATGGGGGCCAACTCTCGGGCTGCTGCTCTTTaGCGAGACAGCTGTAAGGACCTGTCCACTGCCTTCTGCAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSIMGANSRAAAL*RDSCKDLSTAFCRC Trigger: GCATCTGCAGAAGGCAGTGGACAGGTCCTTACAGCTGTCTCGTCAAAGAGCAGCAGCCCGAGAGTTGGCCCCCATGATTGATAAGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS GCA 90 bp | CTCATAGCATTGACATGCTCTGTGAGCCGGTGCACTCGCTCATGCTaGTCTGTCAGTGCCCCCTTGGTATGTTCTAGCTGGGTTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LIALTCSVSRCTRSC*SVSAPLVCSSWVCD Trigger: GTCACAAACCCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCATGTCAATGCTATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CCA 90 bp | TCTTTTCCTCTGAGTGCCACTGCTGACCCGAATGGTAGGGATCTGTaGGCCCTGACTATGCAGGAGGTAAGTGTCTATGGTAGGCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: SFPLSATADPNGRDL*ALTMQEVSVYGRHG Trigger: ACCGTGCCTACCATAGACACTTACCTCCTGCATAGTCAGGGCCCACAGATCCCTACCATTCGGGTCAGCAGTGGCACTCAGAGGAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS-3UTR CAA 90 bp | AAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTGCTCCAGCTCTTGTTaGAGGCCGTCATACTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGNPSEEMILWRWDQGELCSSSC*RPSYSA Trigger: GGCCGAGTATGACGGCCTCAAACAAGAGCTGGAGCA...GAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGTGGCTATCACTGAGGTaGATGTACTGGGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AHCELECGCSLLRAMSGLWLSLR*MYWDSS Trigger: GGAGCTGTCCCAGTACATCAACCTCAGTGATAGCCA...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGTCTGTCAGTGCCCCCTaGGTATGTTCTAGCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AHCELECGCSLLRAMSGLSVSAP*VCSSWV Trigger: AACCCAGCTAGAACATACCAAGGGGGCACTGACAGA...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGCCTCAGGTTGTTCTTTaGCTCTCTTTCATTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLGSLASQLVVSTVAVRRPQVVL*LSFILQ Trigger: CTGAAGAATGAAAGAGAGCAAAAGAACAACCTGAGG...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTAAGCCCCTCATAGCATaGACATGCTCTGTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GEPFRRNDSVEVGSGGTLKPLIA*TCSVSR Trigger: CCGGCTCACAGAGCATGTCAATGCTATGAGGGGCTT...AAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCCACGGTTAACCATATTCATTGGCTCTTaGCGAATATCACTGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: VAVRRQQAADNLVEPRLTIFIGS*RISLVS Trigger: GGATACCAGTGATATTCGCAAAGAGCCAATGAATAT...GGTTAACCGTGGCTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS CCA 90 bp | ACTCGCTCATGCTGCTCTGTCAGTGCCCCCTTGGTATGTTCTAGCTaGGTTTGTGACTCCTGGAGGTTGGCCAGAAGAATAGCTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRSCCSVSAPLVCSS*VCDSWRLARRIAFS Trigger: GGAAAAAGCTATTCTTCTGGCCAACCTCCAGGAGTCACAAACCCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTGCTCCAGCTCTTGTTaGAGGCCGTCATACTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYCSSSC*RPSYSA Trigger: GGCCGAGTATGACGGCCTCAAACAAGAGCTGGAGCA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAATCTGTCAGTGCCCCCTaGGTATGTTCTAGCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WKGNPSEEMILWRWDQGESVSAP*VCSSWV Trigger: AACCCAGCTAGAACATACCAAGGGGGCACTGACAGA...TTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGGATCATCAGGCCCCTaGAGGCTGCCACTTCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYGSSGP*RLPLRV Trigger: TACTCGAAGTGGCAGCCTCAAGGGGCCTGATGATCC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | GTTGTGAGCACTGTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGGGTTGTAGATATTCATaGGCTCTTTGCGAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVSTVAVRRQQAADNLVEGCRYS*ALCEYH Trigger: GTGATATTCGCAAAGAGCCAATGAATATCTACAACC...CTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GCACACTGTGAGCTGGAATGTGGCTGTTCCTTACTGAGGGCAATGTCCGGACTGCTGCAGATGCTTGATTaGGTCCCGGATTATGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: AHCELECGCSLLRAMSGLLQMLD*VPDYGI Trigger: AATGCCATAATCCGGGACCAAATCAAGCATCTGCAG...CAGTCCGGACATTGCCCTCAGTAAGGAACAGCCACATTCCAGCTCACAGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGCTGCAGATGCTTGATTaGGTCCCGGATTATGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQLQMLD*VPDYGI Trigger: AATGCCATAATCCGGGACCAAATCAAGCATCTGCAG...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTGCCTTCTGCAGATGCTaGATTTGGTCCCGGATTATG | + |
|
Preference number: 5 (lower is better) Translates to: FLAEPMPLDEFTHGRGTLAFCRC*IWSRIM Trigger: CATAATCCGGGACCAAATCAAGCATCTGCAGAAGGC...AAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTGGGTAGTCTTGCCTCCCAGCTAGTTGTGAGCACTGTGGCGGTACGGAGGAGCAAGGACTTCAGTTaGAGAATCTCTTCCATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLGSLASQLVVSTVAVRRSKDFS*RISSIK Trigger: CTTAATGGAAGAGATTCTCAAACTGAAGTCCTTGCT...CCTCCGTACCGCCACAGTGCTCACAACTAGCTGGGAGGCAAGACTACCCAACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTGAGCACTGTGGCGGTACGGAGGCAGCAGGCTGCTGACAATCTGGTGGAGCATATTCATCGCATCTaGTTGCAAACATTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VVSTVAVRRQQAADNLVEHIHRI*LQTLLS Trigger: TGAGAGCAATGTTTGCAACAAGATGCGATGAATATG...CTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS GCA 90 bp | GTTCTCTTTCAGTTCCTGTACAACGGCCGAGAGCCTCTCATTTTCTaGCTGGACATTTGTAACCACAGCCCGGCTCTGCTTCAGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VLFQFLYNGREPLIF*LDICNHSPALLQLI Trigger: AATGAGCTGAAGCAGAGCCGGGCTGTGGTTACAAATGTCCAGGCAGAAAATGAGAGGCTCTCGGCCGTTGTACAGGAACTGAAAGAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CCA 90 bp | CTTCCATCCTCAGCAAACTTGAGCCCATCTACTGAGATGCTGATGTaGCTATCACTGAGGTTGATGTACTGGGACAGCTCCTTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSSANLSPSTEMLM*LSLRLMYWDSSFLR Trigger: CCTGAGGAAGGAGCTGTCCCAGTACATCAACCTCAGTGATAGCCACATCAGCATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTTGTGACTCCTGGAGGTaGGCCAGAAGAATAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLAEPMPLDEFTHGRGTLCDSWR*ARRIAF Trigger: AAAAGCTATTCTTCTGGCCAACCTCCAGGAGTCACA...AAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAATCAGCCTTGATCTCTTaGCTGTTTTGCAAGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WKGNPSEEMILWRWDQGESALIS*LFCKPL Trigger: GAGGGGCTTGCAAAACAGCAAAGAGATCAAGGCTGA...TTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTTGTCAGGGCGAGTTTTaGCTGGATAGCCATTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GEPFRRNDSVEVGSGGTLCQGEF*LDSHSQ Trigger: TTGCGAATGGCTATCCAGCAAAAACTCGCCCTGACA...AAGAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATCAGGGGGAACTCTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGNPSEEMILWRWDQGELLGLPI*LFPSLP Trigger: AGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAA...GAGTTCCCCCTGATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS GCA 90 bp | GCTGTCTGCTTATTGGCTTTCAACACTGCCCTCAGTGTCGCAATCTaGTCCCGTTTGGTGCTCAGCAAGGACTTCAGTTTGAGAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVCLLAFNTALSVAI*SRLVLSKDFSLRIS Trigger: AGAGATTCTCAAACTGAAGTCCTTGCTGAGCACCAAACGGGAGCAGATTGCGACACTGAGGGCAGTGTTGAAAGCCAATAAGCAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTGCTCCAGCTCTTGTTaGAGGCCGTCATACTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCCSSSC*RPSYSA Trigger: GGCCGAGTATGACGGCCTCAAACAAGAGCTGGAGCA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTGGCTATCACTGAGGTaGATGTACTGGGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYWLSLR*MYWDSS Trigger: GGAGCTGTCCCAGTACATCAACCTCAGTGATAGCCA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYFPSLP*LRRDCS Trigger: TGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAA...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WDQGELLINSVGRKPLKSFPSLP*LRRDCS Trigger: TGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAA...GGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHSWKGNPSEEMILWRWDLLFPS*PLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAA...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCCATCCTCAGCAAACTaGAGCCCATCTACTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYPSSAN*SPSTEM Trigger: CATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATGG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCAGCTCGTCATACTGTaGCTTGAGAGTCAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYQLVIL*LESQFL Trigger: GAGAAACTGACTCTCAAGCAACAGTATGACGAGCTG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATAGCTCCACCATCTCGTaGTTCTCTTTCAGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYSSTIS*FSFSSC Trigger: ACAGGAACTGAAAGAGAACAACGAGATGGTGGAGCT...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATAGCTCCACCATCTCGTaGTTCTCTTTCAGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHSWKGNPSEEMILWRWDSSTIS*FSFSSC Trigger: ACAGGAACTGAAAGAGAACAACGAGATGGTGGAGCT...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGAGCCGATGCCCTTGGATGAGTTCACTCATGGAAGGGGAACCCTTCAGCTCAAGGTTTGTCACTaGTTCATCATACATTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LAEPMPLDEFTHGRGTLQLKVCH*FIIHLD Trigger: ATCCAAATGTATGATGAACAAGTGACAAACCTTGAG...CTGAAGGGTTCCCCTTCCATGAGTGAACTCATCCAAGGGCATCGGCTCAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCLLFPS*PLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATGTTTCTGTGAGCTCCTaGGTCAGTCTCTCTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYVSVSS*VSLSIS Trigger: TGAAATAGAGAGACTGACCAAGGAGCTCACAGAAAC...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATGTTTCTGTGAGCTCCTaGGTCAGTCTCTCTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VHSWKGNPSEEMILWRWDVSVSS*VSLSIS Trigger: TGAAATAGAGAGACTGACCAAGGAGCTCACAGAAAC...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATACGGCCACTCTATATTaGCACTCAAGGATCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYTATLY*HSRISK Trigger: CTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCGT...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TGGGATCAGGGGGAACTCTTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCACGGCCACTCTATATTaGCACTCAAGGATCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: WDQGELLINSVGRKPLKSTATLY*HSRISK Trigger: CTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCGT...GGACTTCAGGGGCTTCCTACCTACAGAATTTATTAAGAGTTCCCCCTGATCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGGATCATCAGGCCCCTaGAGGCTGCCACTTCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHGSSGP*RLPLRV Trigger: TACTCGAAGTGGCAGCCTCAAGGGGCCTGATGATCC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCATGGAAGGGGAACCCTTCAGAAGAAATGATTCTGTGGAGGTGGGATTCCATTAAGGCTTCCTaGTCCTTATCAATCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VHSWKGNPSEEMILWRWDSIKAS*SLSIMG Trigger: CCCCATGATTGATAAGGACAAGGAAGCCTTAATGGA...ATCCCACCTCCACAGAATCATTTCTTCTGAAGGGTTCCCCTTCCATGAGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGAGCTGCTCCAGCTCTaGTTTGAGGCCGTCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHELLQL*FEAVIL Trigger: GAGTATGACGGCCTCAAACAAGAGCTGGAGCAGCTC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCCATCCTCAGCAAACTaGAGCCCATCTACTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRPSSAN*SPSTEM Trigger: CATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATGG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTTGTGACTCCTGGAGGTaGGCCAGAAGAATAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCCDSWR*ARRIAF Trigger: AAAAGCTATTCTTCTGGCCAACCTCCAGGAGTCACA...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACAAGCCCCTCATAGCATaGACATGCTCTGTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHKPLIA*TCSVSR Trigger: CCGGCTCACAGAGCATGTCAATGCTATGAGGGGCTT...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTCAGCCTTGATCTCTTaGCTGTTTTGCAAGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRSALIS*LFCKPL Trigger: GAGGGGCTTGCAAAACAGCAAAGAGATCAAGGCTGA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGGCCTTCTGCAGATGCTaGATTTGGTCCCGGATTATG | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRAFCRC*IWSRIM Trigger: CATAATCCGGGACCAAATCAAGCATCTGCAGAAGGC...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTGTCAGGGCGAGTTTTaGCTGGATAGCCATTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRCQGEF*LDSHSQ Trigger: TTGCGAATGGCTATCCAGCAAAAACTCGCCCTGACA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRLGLPI*LFPSLP Trigger: AGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS CCA 90 bp | GCTCATTCTGCATCTCCAAGATCTTGTTTAGATAGTAAGCTTCTTTaGATGCAGACTCCTGAAGAAGTGTTTCCTCCCGAGTCTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHSASPRSCLDSKLL*MQTPEEVFPPESLH Trigger: ATGGAGAGACTCGGGAGGAAACACTTCTTCAGGAGTCTGCATCCAAAGAAGCTTACTATCTAAACAAGATCTTGGAGATGCAGAATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGTGTGACTCCTGGAGGTaGGCCAGAAGAATAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRCDSWR*ARRIAF Trigger: AAAAGCTATTCTTCTGGCCAACCTCCAGGAGTCACA...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACTCTGTCAGTGCCCCCTaGGTATGTTCTAGCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHSVSAP*VCSSWV Trigger: AACCCAGCTAGAACATACCAAGGGGGCACTGACAGA...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTAAGCCCCTCATAGCATaGACATGCTCTGTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSKPLIA*TCSVSR Trigger: CCGGCTCACAGAGCATGTCAATGCTATGAGGGGCTT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATAGCAAGGACTTCAGTTaGAGAATCTCTTCCATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYSKDFS*RISSIK Trigger: CTTAATGGAAGAGATTCTCAAACTGAAGTCCTTGCT...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAATTCATCGCATCTTGTaGCAAACATTGCTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVKVTSLEFAGLALSYVKIHRIL*QTLLSG Trigger: CCCTGAGAGCAATGTTTGCAACAAGATGCGATGAAT...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCATATTCATCGCATCTaGTTGCAAACATTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYHIHRI*LQTLLS Trigger: TGAGAGCAATGTTTGCAACAAGATGCGATGAATATG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS TCA 90 bp | ATTCATTGGCTCTTTGCGAATATCACTGGTATCCAAAACTGGAGATaGTGGTGGGGCAGTAATAACAGGAGAGATTGTGGGAGTCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: IHWLFANITGIQNWR*WWGSNNRRDCGSLS Trigger: ACTAAGACTCCCACAATCTCTCCTGTTATTACTGCCCCACCATCATCTCCAGTTTTGGATACCAGTGATATTCGCAAAGAGCCAATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACTCAGCCTTGATCTCTTaGCTGTTTTGCAAGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHSALIS*LFCKPL Trigger: GAGGGGCTTGCAAAACAGCAAAGAGATCAAGGCTGA...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACAGGAGCAGCACCAATATATCTCAAGGTTTGTCACTaGTTCATCATACATTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTGAAPIYLKVCH*FIIHLD Trigger: ATCCAAATGTATGATGAACAAGTGACAAACCTTGAG...ATATATTGGTGCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGCCTTCTGCAGATGCTaGATTTGGTCCCGGATTATG | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHAFCRC*IWSRIM Trigger: CATAATCCGGGACCAAATCAAGCATCTGCAGAAGGC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSFPSLP*LRRDCS Trigger: TGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSLLFPS*PLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGCCTCAGGTTGTTCTTTaGCTCTCTTTCATTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRPQVVL*LSFILQ Trigger: CTGAAGAATGAAAGAGAGCAAAAGAACAACCTGAGG...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGGTTTTCCTCTGACTTTCCCACACATACTGTGGATAGTGTGTGTGTGTGTATATTCATTGGCTCTTaGCGAATATCACTGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: CRFSSDFPTHTVDSVCVCIFIGS*RISLVS Trigger: GGATACCAGTGATATTCGCAAAGAGCCAATGAATAT...ACACACACACACACTATCCACAGTATGTGTGGGAAAGTCAGAGGAAAACCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | CCAGTAAAAGTGACCTCCCTCGAGTTTGCTGGCTTAGCTCTTTCCTATGTAAAAGGTTGTAGATATTCATaGGCTCTTTGCGAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVKVTSLEFAGLALSYVKGCRYS*ALCEYH Trigger: GTGATATTCGCAAAGAGCCAATGAATATCTACAACC...TTTTACATAGGAAAGAGCTAAGCCAGCAAACTCGAGGGAGGTCACTTTTACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCTGCAGATGCTTGATTaGGTCCCGGATTATGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHLQMLD*VPDYGI Trigger: AATGCCATAATCCGGGACCAAATCAAGCATCTGCAG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS CCA 90 bp | CAAGGGCTTCTTCCAACTGATGCTCTGCAATCTCTTTCAGTCGAATaGCATCTTCTAGTTGGCTATTCAGTAATACTGTTTCTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QGLLPTDALQSLSVE*HLLVGYSVILFLLQ Trigger: TTGAAGAAGAAACAGTATTACTGAATAGCCAACTAGAAGATGCCATTCGACTGAAAGAGATTGCAGAGCATCAGTTGGAAGAAGCCCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCAGCTCGTCATACTGTaGCTTGAGAGTCAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSQLVIL*LESQFL Trigger: GAGAAACTGACTCTCAAGCAACAGTATGACGAGCTG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCACCTCATTTGTAATTTTCTGCAAGAAAAAGGACCAGAATCTGTCCGGAGCAAGGACTTCAGTTaGAGAATCTCTTCCATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LMHLICNFLQEKGPESVRSKDFS*RISSIK Trigger: CTTAATGGAAGAGATTCTCAAACTGAAGTCCTTGCT...CCGGACAGATTCTGGTCCTTTTTCTTGCAGAAAATTACAAATGAGGTGCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTGTTTCTGTGAGCTCCTaGGTCAGTCTCTCTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSVSVSS*VSLSIS Trigger: TGAAATAGAGAGACTGACCAAGGAGCTCACAGAAAC...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACCCTCAGGTTGTTCTTTaGCTCTCTTTCATTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHPQVVL*LSFILQ Trigger: CTGAAGAATGAAAGAGAGCAAAAGAACAACCTGAGG...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTACGGCCACTCTATATTaGCACTCAAGGATCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSTATLY*HSRISK Trigger: CTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCGT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTTCCATTAAGGCTTCCTaGTCCTTATCAATCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSSIKAS*SLSIMG Trigger: CCCCATGATTGATAAGGACAAGGAAGCCTTAATGGA...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTATTCATCGCATCTTGTaGCAAACATTGCTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSIHRIL*QTLLSG Trigger: CCCTGAGAGCAATGTTTGCAACAAGATGCGATGAAT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTCAAGTAATTTGTCCTTCTTTAATACGACCACACACACACACACACACGGTTGTAGATATTCATaGGCTCTTTGCGAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPSSNLSFFNTTTHTHTHGCRYS*ALCEYH Trigger: GTGATATTCGCAAAGAGCCAATGAATATCTACAACC...GTGTGTGTGTGTGTGTGTGGTCGTATTAAAGAAGGACAAATTACTTGAAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS GCA 90 bp | TGGCTATTCAGTAATACTGTTTCTTCTTCAAATCGCTTAATTTCATaGTTTAAGCCTTCGTATTCAACCTGGTTCTGCTTCAATGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLFSNTVSSSNRLIS*FKPSYSTWFCFNVD Trigger: GTCCACATTGAAGCAGAACCAGGTTGAATACGAAGGCTTAAAGCATGAAATTAAGCGATTTGAAGAAGAAACAGTATTACTGAATAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTATATTCATTGGCTCTTaGCGAATATCACTGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSIFIGS*RISLVS Trigger: GGATACCAGTGATATTCGCAAAGAGCCAATGAATAT...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCATATTCATCGCATCTaGTTGCAAACATTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSHIHRI*LQTLLS Trigger: TGAGAGCAATGTTTGCAACAAGATGCGATGAATATG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATTGATCACACGAAGGTCTATGCATCATTTTATTCTTCTGAACTCTCTCTCAAGGTTTGTCACTaGTTCATCATACATTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PEIDHTKVYASFYSSELSLKVCH*FIIHLD Trigger: ATCCAAATGTATGATGAACAAGTGACAAACCTTGAG...AGAGAGTTCAGAAGAATAAAATGATGCATAGACCTTCGTGTGATCAATTTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086829.11 ENSMUST00000111513.9 |
||
| CDS CAA 90 bp | GGCACGGTGTCTGGCGCCTCCCCACTTACTTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGACTGCTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GTVSGASPLTLGLPI*LFPSLPLLRRDCSW Trigger: CCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAGTAAGTGGGGAGGCGCCAGACACCGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS GCA 72 bp | AAGCCCCTCATAGCATTGACATGCTCTGTGAGCCGGTaGACTCGCTCATGCTGCTCTGTCAGTGCCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KPLIALTCSVSR*TRSCCSVSAPL Trigger: CAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCATGTCAATGCTATGAGGGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CAA 72 bp | CGGTGCACTCGCTCATGCTGCTCTGTCAGTGCCCCCTaGGTATGTTCTAGCTGGGTTTGTGACTCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RCTRSCCSVSAP*VCSSWVCDSWR Trigger: CCTCCAGGAGTCACAAACCCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS GCA 72 bp | TTGACATGCTCTGTGAGCCGGTGCACTCGCTCATGCTaGTCTGTCAGTGCCCCCTTGGTATGTTCTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTCSVSRCTRSC*SVSAPLVCSSW Trigger: CCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCATGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS GCA 72 bp | GCATTGACATGCTCTGTGAGCCGGTGCACTCGCTCATaGTGCTCTGTCAGTGCCCCCTTGGTATGTTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALTCSVSRCTRS*CSVSAPLVCSS Trigger: GCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACCGGCTCACAGAGCATGTCAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CCA 72 bp | GGTGCACTCGCTCATGCTGCTCTGTCAGTGCCCCCTTaGTATGTTCTAGCTGGGTTTGTGACTCCTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GALAHAALSVPP*YVLAGFVTPGG Trigger: ACCTCCAGGAGTCACAAACCCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCATGAGCGAGTGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CAA 72 bp | TCTGGCGCCTCCCCACTTACTTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGASPLTLGLPI*LFPSLPLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAGTAAGTGGGGAGGCGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS CAA 90 bp | GAGAAGGACTGCCCAAATGCCTCTCTGAGCTGCTCCAGCTCTTGTTaGAGGCCGTCATACTCGGCCTCCAGCTCGTCATACTGTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EKDCPNASLSCSSSC*RPSYSASSSSYCCL Trigger: CAAGCAACAGTATGACGAGCTGGAGGCCGAGTATGACGGCCTCAAACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS GCA 72 bp | TGGATAGAGAAGGACTGCCCAAATGCCTCTCTGAGCTaGTCCAGCTCTTGTTTGAGGCCGTCATACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WIEKDCPNASLS*SSSCLRPSYSA Trigger: GGCCGAGTATGACGGCCTCAAACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTCTCTATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CCA 72 bp | ATGCAGGAGGTAAGTGTCTATGGTAGGCACGGTGTCTaGCGCCTCCCCACTTACTTTAGGGCTGCCGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: MQEVSVYGRHGV*RLPTYFRAADL Trigger: AAGATCGGCAGCCCTAAAGTAAGTGGGGAGGCGCCAGACACCGTGCCTACCATAGACACTTACCTCCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS CCA 72 bp | CTGAGTGCCACTGCTGACCCGAATGGTAGGGATCTGTaGGCCCTGACTATGCAGGAGGTAAGTGTCTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSATADPNGRDL*ALTMQEVSVYG Trigger: ACCATAGACACTTACCTCCTGCATAGTCAGGGCCCACAGATCCCTACCATTCGGGTCAGCAGTGGCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS CAA 72 bp | GGCAGCAGGCTGCTGACAATTTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GSRLLTILGLPI*LFPSLPLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAATTGTCAGCAGCCTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS CAA 72 bp | CCTGAAGTCCTGGGACGACTTTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PEVLGRLLGLPI*LFPSLPLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAAGTCGTCCCAGGACTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172926.2 |
||
| CDS GCA 72 bp | CAGTTCCTGTACAACGGCCGAGAGCCTCTCATTTTCTaGCTGGACATTTGTAACCACAGCCCGGCTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QFLYNGREPLIF*LDICNHSPALL Trigger: AAGCAGAGCCGGGCTGTGGTTACAAATGTCCAGGCAGAAAATGAGAGGCTCTCGGCCGTTGTACAGGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CCA 72 bp | TCCTCCCGAGTCTCTCCATCCTCAGCTACTTTACGGTaGATAGAGAAGGACTGCCCAAATGCCTCTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRVSPSSATLR*IEKDCPNASLS Trigger: GCTCAGAGAGGCATTTGGGCAGTCCTTCTCTATCCACCGTAAAGTAGCTGAGGATGGAGAGACTCGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | CCGGATTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PDLGLPILLFPS*PLLRRDCSWSN Trigger: GTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAATCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111513.9 |
||
| CDS CAA 90 bp | GCCTCCCCACTTACTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASPLTLGLPILLFPS*PLLRRDCSWSNSKS Trigger: GGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAGTAAGTGGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
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| CDS CAA 90 bp | TGTCCGGATTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CPDLGLPILLFPSLP*LRRDCSWSNSKSSS Trigger: GCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAATCCGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111513.9 |
||
| CDS CAA 90 bp | GGGCAATGTCCGGATTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GQCPDLGLPILLFPS*PLLRRDCSWSNSKS Trigger: GGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAATCCGGACATTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111513.9 |
||
| CDS CAA 90 bp | GGACGACTTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRLLGLPILLFPSLP*LRRDCSWSNSKSSS Trigger: GCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAAGTCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172926.2 |
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| CDS CAA 90 bp | GTCCTGGGACGACTTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLGRLLGLPILLFPS*PLLRRDCSWSNSKS Trigger: GGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAAGTCGTCCCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172926.2 |
||
| CDS GCA 72 bp | CCATCCTCAGCTACTTTACGGTGGATAGAGAAGGACTaGCCAAATGCCTCTCTGAGCTGCTCCAGCTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSSATLRWIEKD*PNASLSCSSSC Trigger: ACAAGAGCTGGAGCAGCTCAGAGAGGCATTTGGGCAGTCCTTCTCTATCCACCGTAAAGTAGCTGAGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS GCA 72 bp | GGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTTGCTaGGTCGGGACTGCTCATGGTCAAACTCTAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCRSCSFQVCLC*VGTAHGQTLSP Trigger: AGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | TGCTGCTCTGTCAGTGCCCCCTTGGTATGTTCTAGCTaGGTTTGTGACTCCTGGAGGTTGGCCAGAAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: CCSVSAPLVCSS*VCDSWRLARRI Trigger: TATTCTTCTGGCCAACCTCCAGGAGTCACAAACCCAGCTAGAACATACCAAGGGGGCACTGACAGAGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | CGACTTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RLLGLPILLFPS*PLLRRDCSWSN Trigger: GTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172926.2 |
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| CDS CAA 90 bp | GCTTCCTCCGCTGAGTTCCGGCCCTTCTCACAATCTAGCTCAGCCTaGATCTCTTTGCTGTTTTGCAAGCCCCTCATAGCATTGACATGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSAEFRPFSQSSSA*ISLLFCKPLIALTC Trigger: GCATGTCAATGCTATGAGGGGCTTGCAAAACAGCAAAGAGATCAAGGCTGAGCTAGATTGTGAGAAGGGCCGGAACTCAGCGGAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 90 bp | CCACTTACTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLTLGLPILLFPSLP*LRRDCSWSNSKSSS Trigger: GCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAGTAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
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| CDS CAA 90 bp | GCTGAGTTCCGGCCCTTCTCACAATCTAGCTCAGCCTTGATCTCTTaGCTGTTTTGCAAGCCCCTCATAGCATTGACATGCTCTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AEFRPFSQSSSALIS*LFCKPLIALTCSVS Trigger: GCTCACAGAGCATGTCAATGCTATGAGGGGCTTGCAAAACAGCAAAGAGATCAAGGCTGAGCTAGATTGTGAGAAGGGCCGGAACTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 90 bp | CTGACAATTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTILGLPILLFPSLP*LRRDCSWSNSKSSS Trigger: GCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAATTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| CDS CAA 90 bp | AGGCTGCTGACAATTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLLTILGLPILLFPS*PLLRRDCSWSNSKS Trigger: GGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAATTGTCAGCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
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| CDS GCA 72 bp | GACAGCTGTAAGGACCTGTCCACTGCCTTCTGCAGATaGTTGATTTGGTCCCGGATTATGGCATTGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSCKDLSTAFCR*LIWSRIMALRL Trigger: CAACCTCAATGCCATAATCCGGGACCAAATCAAGCATCTGCAGAAGGCAGTGGACAGGTCCTTACAGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS GCA 72 bp | TTGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGACTaGTCATGGTCAAACTCTAAGTCCTCCAGCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLFPSLPLLRRD*SWSNSKSSSLC Trigger: ACAGAGGCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | GCCCCCTTGGTATGTTCTAGCTGGGTTTGTGACTCCTaGAGGTTGGCCAGAAGAATAGCTTTTTCCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: APLVCSSWVCDS*RLARRIAFSLS Trigger: AGAGAGGGAAAAAGCTATTCTTCTGGCCAACCTCCAGGAGTCACAAACCCAGCTAGAACATACCAAGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | GAGCTCCTTGGTCAGTCTCTCTATTTCAGTCTTATATaGGTCTACCGTCTTCAGCGCCTCCTCTGCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ELLGQSLYFSLI*VYRLQRLLCGH Trigger: ATGGCCGCAGAGGAGGCGCTGAAGACGGTAGACCAATATAAGACTGAAATAGAGAGACTGACCAAGGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | TTGATCTCTTTGCTGTTTTGCAAGCCCCTCATAGCATaGACATGCTCTGTGAGCCGGTGCACTCGCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LISLLFCKPLIA*TCSVSRCTRSC Trigger: GCATGAGCGAGTGCACCGGCTCACAGAGCATGTCAATGCTATGAGGGGCTTGCAAAACAGCAAAGAGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | TTAGGGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGLPILLFPSLP*LRRDCSWSNSK Trigger: CTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | CTTACTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LTLGLPILLFPS*PLLRRDCSWSN Trigger: GTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
||
| CDS GCA 72 bp | TTATTGGCTTTCAACACTGCCCTCAGTGTCGCAATCTaGTCCCGTTTGGTGCTCAGCAAGGACTTCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLAFNTALSVAI*SRLVLSKDFSL Trigger: CAAACTGAAGTCCTTGCTGAGCACCAAACGGGAGCAGATTGCGACACTGAGGGCAGTGTTGAAAGCCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | TCAGCAAACTTGAGCCCATCTACTGAGATGCTGATGTaGCTATCACTGAGGTTGATGTACTGGGACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SANLSPSTEMLM*LSLRLMYWDSS Trigger: GGAGCTGTCCCAGTACATCAACCTCAGTGATAGCCACATCAGCATCTCAGTAGATGGGCTCAAGTTTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CAA 72 bp | ACAATTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TILGLPILLFPS*PLLRRDCSWSN Trigger: GTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086829.11 |
||
| CDS CAA 72 bp | ATTGTTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IVLGLPILLFPS*PLLRRDCSWSN Trigger: GTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS CAA 90 bp | CTCAGCAAGGACTTCAGTTTGAGAATCTCTTCCATTAAGGCTTCCTaGTCCTTATCAATCATGGGGGCCAACTCTCGGGCTGCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSKDFSLRISSIKAS*SLSIMGANSRAAAL Trigger: AAGAGCAGCAGCCCGAGAGTTGGCCCCCATGATTGATAAGGACAAGGAAGCCTTAATGGAAGAGATTCTCAAACTGAAGTCCTTGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CAA 90 bp | AAAATTGTTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTTGCCTTaGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KIVLGLPILLFPSLP*LRRDCSWSNSKSSS Trigger: GCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAACAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS CAA 72 bp | AGGCCCCTTGAGGCTGCCACTTCGAGTAACTCTGCTTaGTCTATAGTAGTCCAACATGACTCTATTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPLEAATSSNSA*SIVVQHDSIGS Trigger: ACTCCCAATAGAGTCATGTTGGACTACTATAGACAAAGCAGAGTTACTCGAAGTGGCAGCCTCAAGGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS CAA 72 bp | AAAGGGAAGGTGAAAATTGTTTTAGGGCTGCCGATCTaGCTCTTTCCAAGTTTGCCTTTGCTGCGTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KGKVKIVLGLPI*LFPSLPLLRRD Trigger: GTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAACAATTTTCACCTTCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS CAA 90 bp | AAGGTGAAAATTGTTTTAGGGCTGCCGATCTTGCTCTTTCCAAGTTaGCCTTTGCTGCGTCGGGACTGCTCATGGTCAAACTCTAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KVKIVLGLPILLFPS*PLLRRDCSWSNSKS Trigger: GGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAACAATTTTCACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173408.8 |
||
| CDS CAA 90 bp | TGTATTGAGGGTGTTGTGATTTTCGTTGGCTATGCCAGTCATCTTTaGCAACTCCTTCTCCATGTGGGCCATCTTCTCACCACTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CIEGVVIFVGYASHL*QLLLHVGHLLTTLL Trigger: AAGGAGAGTGGTGAGAAGATGGCCCACATGGAGAAGGAGTTGCAAAAGATGACTGGCATAGCCAACGAAAATCACAACACCCTCAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
||
| CDS TCA 72 bp | ACTCTGCAGCCTGGATCTTCTCATGGGTCGTTTCTGTaGGCTCCTTGGTCAGTCTCTCTATTTCAGTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: TLQPGSSHGSFL*APWSVSLFQSY Trigger: ATAAGACTGAAATAGAGAGACTGACCAAGGAGCTCACAGAAACGACCCATGAGAAGATCCAGGCTGCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS TCA 72 bp | CTCACTTCCATCCTCAGCAAACTTGAGCCCATCTACTaGGATGCTGATGTGGCTATCACTGAGGTTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: LTSILSKLEPIY*DADVAITEVDV Trigger: TACATCAACCTCAGTGATAGCCACATCAGCATCTCAGTAGATGGGCTCAAGTTTGCTGAGGATGGAAGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS TCA 72 bp | GTCACCAACTCATCCTGGGCTGTATTGAGGGTGTTGTaGTTTTCGTTGGCTATGCCAGTCATCTTTTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: VTNSSWAVLRVL*FSLAMPVIFCN Trigger: GTTGCAAAAGATGACTGGCATAGCCAACGAAAATCACAACACCCTCAATACAGCCCAGGATGAGTTGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS GCA 72 bp | TCTAAGTCCTCCAGCCTCTGTGTCAGGGCGAGTTTTTaGTGGATAGCCATTCGCAATAAAGTGTTTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SKSSSLCVRASF*WIAIRNKVFRV Trigger: GACTCTAAACACTTTATTGCGAATGGCTATCCAGCAAAAACTCGCCCTGACACAGAGGCTGGAGGACTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | AAGTCCTCCAGCCTCTGTGTCAGGGCGAGTTTTTGCTaGATAGCCATTCGCAATAAAGTGTTTAGAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSSSLCVRASFC*IAIRNKVFRVF Trigger: GAAGACTCTAAACACTTTATTGCGAATGGCTATCCAGCAAAAACTCGCCCTGACACAGAGGCTGGAGGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | TCTTTCATTCGTATTCTCTGTAGCTCCACCATCTCGTaGTTCTCTTTCAGTTCCTGTACAACGGCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFIRILCSSTIS*FSFSSCTTAES Trigger: GCTCTCGGCCGTTGTACAGGAACTGAAAGAGAACAACGAGATGGTGGAGCTACAGAGAATACGAATGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | GACTTCAGTTTGAGAATCTCTTCCATTAAGGCTTCCTaGTCCTTATCAATCATGGGGGCCAACTCTCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: DFSLRISSIKAS*SLSIMGANSRA Trigger: AGCCCGAGAGTTGGCCCCCATGATTGATAAGGACAAGGAAGCCTTAATGGAAGAGATTCTCAAACTGAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 90 bp | CGGATTTCATCTTTCATTCGTATTCTCTGTAGCTCCACCATCTCGTaGTTCTCTTTCAGTTCCTGTACAACGGCCGAGAGCCTCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: RISSFIRILCSSTIS*FSFSSCTTAESLSF Trigger: AAATGAGAGGCTCTCGGCCGTTGTACAGGAACTGAAAGAGAACAACGAGATGGTGGAGCTACAGAGAATACGAATGAAAGATGAAATCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 90 bp | TCTCCATTCAGTTTCCCAAGAGGCCCATGGATATGTCCATTCATCTaGTCATCGTTATTTGGCTCACTTCCATCCTCAGCAAACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPFSFPRGPWICPFI*SSLFGSLPSSANLS Trigger: GCTCAAGTTTGCTGAGGATGGAAGTGAGCCAAATAACGATGACAAGATGAATGGACATATCCATGGGCCTCTTGGGAAACTGAATGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 90 bp | GGGATCATCAGGCCCCTTGAGGCTGCCACTTCGAGTAACTCTGCTTaGTCTATAGTAGTCCAACATGACTCTATTGGGAGTTTCATTATT | + |
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Preference number: 6 (lower is better) Translates to: GIIRPLEAATSSNSA*SIVVQHDSIGSFII Trigger: AATAATGAAACTCCCAATAGAGTCATGTTGGACTACTATAGACAAAGCAGAGTTACTCGAAGTGGCAGCCTCAAGGGGCCTGATGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | CCCATGGATATGTCCATTCATCTTGTCATCGTTATTTaGCTCACTTCCATCCTCAGCAAACTTGAGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: PMDMSIHLVIVI*LTSILSKLEPI Trigger: GATGGGCTCAAGTTTGCTGAGGATGGAAGTGAGCCAAATAACGATGACAAGATGAATGGACATATCCATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | TTAATAAATTCTGTAGGTAGGAAGCCCCTGAAGTCCTaGGACGACTCTGATCACAAAGGGAAGGTGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LINSVGRKPLKS*DDSDHKGKVKI Trigger: AATTTTCACCTTCCCTTTGTGATCAGAGTCGTCCCAGGACTTCAGGGGCTTCCTACCTACAGAATTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003544.14 |
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| CDS CAA 72 bp | TTCAAATCAATGACTTCTGTGACGGCCACTCTATATTaGCACTCAAGGATCTCTAAGCCATTGATGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: FKSMTSVTATLY*HSRISKPLMST Trigger: GGTGGACATCAATGGCTTAGAGATCCTTGAGTGCAAATATAGAGTGGCCGTCACAGAAGTCATTGATTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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| CDS CAA 72 bp | ATCTTGTTGCAAACATTGCTCTCAGGGATGAGAAGGTaGCAGCATCTTCCTTCAAAGCCTTTAGTTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: ILLQTLLSGMRR*QHLPSKPLVHS Trigger: GGAATGAACTAAAGGCTTTGAAGGAAGATGCTGCAACCTTCTCATCCCTGAGAGCAATGTTTGCAACAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CAA 90 bp | ATTCATCGCATCTTGTTGCAAACATTGCTCTCAGGGATGAGAAGGTaGCAGCATCTTCCTTCAAAGCCTTTAGTTCATTCCTCAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: IHRILLQTLLSGMRR*QHLPSKPLVHSSVL Trigger: CAAAACTGAGGAATGAACTAAAGGCTTTGAAGGAAGATGCTGCAACCTTCTCATCCCTGAGAGCAATGTTTGCAACAAGATGCGATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000172926.2 ENSMUST00000173408.8 |
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| CDS CCA 72 bp | CTTCCAACTGATGCTCTGCAATCTCTTTCAGTCGAATaGCATCTTCTAGTTGGCTATTCAGTAATACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LPTDALQSLSVE*HLLVGYSVILF Trigger: AAACAGTATTACTGAATAGCCAACTAGAAGATGCCATTCGACTGAAAGAGATTGCAGAGCATCAGTTGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003544.14 ENSMUST00000086829.11 ENSMUST00000111513.9 ENSMUST00000173408.8 |
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