Pregenerated sensors for BHMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042118Ensembl transcript IDs: ENSMUST00000015941.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGCCCATCGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCACATaGAGTGGAGAACTACCCTTGGCACATGCGCAGATTATTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: CSPSAELSSRGRQST*SGELPLAHAQIICL Trigger: TAAACAAATAATCTGCGCATGTGCCAAGGGTAGTTCTCCACTCCATGTGCTCTGCCTTCCCCGTGACGACAACTCGGCCGATGGGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 90 bp | AGGTGCCTCTGCATCTCCACTGCATCTGATGAGCATGCTCAGGAGTaGCATGTCACTACAACTGAAGGGATACCACTCATAGATGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RCLCISTASDEHAQE*HVTTTEGIPLIDAQ Trigger: CTGAGCATCTATGAGTGGTATCCCTTCAGTTGTAGTGACATGTCACTCCTGAGCATGCTCATCAGATGCAGTGGAGATGCAGAGGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 90 bp | TGCTTCTTGCTGACTTGGGATTATTTGAGAATGTCAAATCCACCCTaGGAGCCAACTCTGGCCATGCCCAATGACCTTCAAATGGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: CFLLTWDYLRMSNPP*EPTLAMPNDLQMEA Trigger: GGCCTCCATTTGAAGGTCATTGGGCATGGCCAGAGTTGGCTCTCAGGGTGGATTTGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR GCA 90 bp | TGTAGCTCAAGACCTAGCTTCAACACCAGAATTATTCACCAAGGTTaGTTCTTGCTGACTTGGGATTATTTGAGAATGTCAAATCCACCC | + |
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Preference number: 1 (lower is better) Translates to: CSSRPSFNTRIIHQG*FLLTWDYLRMSNPP Trigger: GGGTGGATTTGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCAACCTTGGTGAATAATTCTGGTGTTGAAGCTAGGTCTTGAGCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 90 bp | ACAGTGTACAAAACAAACATGAACATAGAAAGTGCTAGAACAAGATaGACTTGCTCTCTGAGTTCTAAAACGGCCTTGCAAGGTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: TVYKTNMNIESARTR*TCSLSSKTALQGSC Trigger: ACATGAACCTTGCAAGGCCGTTTTAGAACTCAGAGAGCAAGTTCATCTTGTTCTAGCACTTTCTATGTTCATGTTTGTTTTGTACACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGTCAAATCCACCCTGAGAGCCAACTCTGGCCATGCCCAATGACCTTCAAATTACTCGGCAGAGAGTaGGCGGGGCGTGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ECQIHPESQLWPCPMTFKLLGRE*AGRGVG Trigger: CCCCACCCCACGCCCCGCTCACTCTCTGCCGAGTAA...TTTGAAGGTCATTGGGCATGGCCAGAGTTGGCTCTCAGGGTGGATTTGACATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAAGAGCAAGAGCGGGGCGTGGGGTaGGGTCCAGGTGCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KSSIAYIFRSQSAREQEQERGVG*GPGASA Trigger: TGCAGAGGCACCTGGACCCCACCCCACGCCCCGCTC...TTGCTCTTGCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAATTGCAATGGCGAATGTaGGGGCGGCTTCCCACATTT | + |
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Preference number: 2 (lower is better) Translates to: ESKSSIAYIFRSQSAREQLQWRM*GRLPTF Trigger: AAATGTGGGAAGCCGCCCTCACATTCGCCATTGCAA...TTGCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CAA 90 bp | TGCTTACATCTTCAGGAGCAAGAGAGCAAGAGAGCAAGAGCTCTATaGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAAGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CLHLQEQESKRARAL*LTSLGARAQESKSK Trigger: CTTGCTCTTGCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTCTTGCTCTCTTGCTCCTGAAGATGTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACTGTAGCTCAAGACCTAGCTTCAACACCAGAATTATTCACCAAGGTTGCTGATACCACTCATAGATaGTCAGCAGCCAGAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ETVAQDLASTPELFTKVADTTHR*SAARRA Trigger: TGCTCTTCTGGCTGCTGAGCATCTATGAGTGGTATC...AGCAACCTTGGTGAATAATTCTGGTGTTGAAGCTAGGTCTTGAGCTACAGTCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATAATCTAGCCATGCATGGCTATAAAGATGCACTTACAAATTCCAGGACTTGGCCTCTCTTCTCCTaGGACTGTAGCTCAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: VYNLAMHGYKDALTNSRTWPLFS*DCSSRP Trigger: AGGTCTTGAGCTACAGTCTCAGGAGAAGAGAGGCCA...AGTCCTGGAATTTGTAAGTGCATCTTTATAGCCATGCATGGCTAGATTATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATAATCTAGCCATGCATGGCTATAAAGATGCACTTACAAATTCCAGGACTGAAAGCCAAGCATCATaGCTGTTCAATAGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: VYNLAMHGYKDALTNSRTESQAS*LFNSLA Trigger: GGCAAGGCTATTGAACAGTCATGATGCTTGGCTTTC...AGTCCTGGAATTTGTAAGTGCATCTTTATAGCCATGCATGGCTAGATTATAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CCA 72 bp | GCCCGTGGCATTACTCGGCAGAGAGTGAGCGGGGCGTaGGGTGGGGTCCAGGTGCCTCTGCATCTCCACTGC | + |
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Preference number: 3 (lower is better) Translates to: ARGITRQRVSGA*GGVQVPLHLHC Trigger: GCAGTGGAGATGCAGAGGCACCTGGACCCCACCCCACGCCCCGCTCACTCTCTGCCGAGTAATGCCACGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CCA 72 bp | TGGCATTACTCGGCAGAGAGTGAGCGGGGCGTGGGGTaGGGTCCAGGTGCCTCTGCATCTCCACTGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: WHYSAESERGVG*GPGASASPLHL Trigger: CAGATGCAGTGGAGATGCAGAGGCACCTGGACCCCACCCCACGCCCCGCTCACTCTCTGCCGAGTAATGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CCA 72 bp | TCGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCACATaGAGTGGAGAACTACCCTTGGCACATGCGCAGATT | + |
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Preference number: 3 (lower is better) Translates to: SAELSSRGRQST*SGELPLAHAQI Trigger: AATCTGCGCATGTGCCAAGGGTAGTTCTCCACTCCATGTGCTCTGCCTTCCCCGTGACGACAACTCGGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 72 bp | TGCCATCACTCACAACAGCTTTGGCCTCTCTTCTCCTaGGACTGTAGCTCAAGACCTAGCTTCAACACCAGA | + |
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Preference number: 3 (lower is better) Translates to: CHHSQQLWPLFS*DCSSRPSFNTR Trigger: TCTGGTGTTGAAGCTAGGTCTTGAGCTACAGTCTCAGGAGAAGAGAGGCCAAAGCTGTTGTGAGTGATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR GCA 72 bp | GTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTaGAATGGCGAATGTGAGGGCGGCTTCCCACATTTA | + |
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Preference number: 3 (lower is better) Translates to: VYHLEHRMSAPS*NGECEGGFPHL Trigger: TAAATGTGGGAAGCCGCCCTCACATTCGCCATTGCAAGATGGCGCTGACATCCTGTGTTCTAAGTGGTAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CCA 72 bp | GAAGACAGCAGCAAGAAAGGTTCCAGGTGGGGCTTGTaGCTAATTCCTCCTGTCTTGTCACTTCAGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: EDSSKKGSRWGL*LIPPVLSLQSS Trigger: AGAACTCTGAAGTGACAAGACAGGAGGAATTAGCCACAAGCCCCACCTGGAACCTTTCTTGCTGCTGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 72 bp | TGCATCTCCACTGCATCTGATGAGCATGCTCAGGAGTaGCATGTCACTACAACTGAAGGGATACCACTCATA | + |
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Preference number: 3 (lower is better) Translates to: CISTASDEHAQE*HVTTTEGIPLI Trigger: TATGAGTGGTATCCCTTCAGTTGTAGTGACATGTCACTCCTGAGCATGCTCATCAGATGCAGTGGAGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 72 bp | CTGACTTGGGATTATTTGAGAATGTCAAATCCACCCTaGGAGCCAACTCTGGCCATGCCCAATGACCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: LTWDYLRMSNPP*EPTLAMPNDLQ Trigger: TTGAAGGTCATTGGGCATGGCCAGAGTTGGCTCTCAGGGTGGATTTGACATTCTCAAATAATCCCAAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR TCA 72 bp | TTAAAGCGAGAAGTCATCCTGGAAAGCCAAGCATCATaGCTGTTCAATAGCCTTGCCATCACTCACAACAGC | + |
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Preference number: 3 (lower is better) Translates to: LKREVILESQAS*LFNSLAITHNS Trigger: GCTGTTGTGAGTGATGGCAAGGCTATTGAACAGTCATGATGCTTGGCTTTCCAGGATGACTTCTCGCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CCA 72 bp | GCAGAGAGGAATGTAAGAAGCATATTATACGGTCCTTaGCCATCAGTAGTTTATAATCTAGCCATGCATGGC | + |
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Preference number: 3 (lower is better) Translates to: AERNVRSILYGP*PSVVYNLAMHG Trigger: GCCATGCATGGCTAGATTATAAACTACTGATGGCCAAGGACCGTATAATATGCTTCTTACATTCCTCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR CAA 90 bp | GGTCCTTGGCCATCAGTAGTTTATAATCTAGCCATGCATGGCTATAAAGATGCACTAATTCCTCCTGTCTaGTCACTTCAGAGTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GPWPSVVYNLAMHGYKDALIPPV*SLQSSL Trigger: AAGAGAACTCTGAAGTGACAAGACAGGAGGAATTAG...TGCATCTTTATAGCCATGCATGGCTAGATTATAAACTACTGATGGCCAAGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR GCA 72 bp | AGACCTAGCTTCAACACCAGAATTATTCACCAAGGTTaGTTCTTGCTGACTTGGGATTATTTGAGAATGTCA | + |
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Preference number: 3 (lower is better) Translates to: RPSFNTRIIHQG*FLLTWDYLRMS Trigger: TGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCAACCTTGGTGAATAATTCTGGTGTTGAAGCTAGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR-3UTR CAA 90 bp | GTTTATAATCTAGCCATGCATGGCTATAAAGATGCACTTACAAATTCCAGGACTCTGACTTGGGATTATTaGAGAATGTCAAATCCACCC | + |
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Preference number: 3 (lower is better) Translates to: VYNLAMHGYKDALTNSRTLTWDY*RMSNPP Trigger: GGGTGGATTTGACATTCTCAAATAATCCCAAGTCAG...AGTCCTGGAATTTGTAAGTGCATCTTTATAGCCATGCATGGCTAGATTATAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR TCA 90 bp | GGCGTGGGGTGGGGTCCAGGTGCCTCTGCATCTCCACTGCATCTGATGAGCATGCACTGGACCATAAGGTaGGCCTGCAGGCTGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GVGWGPGASASPLHLMSMHWTIR*ACRLAS Trigger: AGATGCCAGCCTGCAGGCTCACCTTATGGTCCAGTG...CATGCTCATCAGATGCAGTGGAGATGCAGAGGCACCTGGACCCCACCCCACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CCA 90 bp | GGCGTGGGGTGGGGTCCAGGTGCCTCTGCATCTCCACTGCATCTGATGAGCATGGCCAAAGGGATACTCTaGGAGGTCCACAAACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GVGWGPGASASPLHLMSMAKGIL*EVHKPS Trigger: GGAGGGTTTGTGGACCTCCCAGAGTATCCCTTTGGC...CATGCTCATCAGATGCAGTGGAGATGCAGAGGCACCTGGACCCCACCCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAATGGAGGCCCGTGGCATTACTCGGCAGAGAGTGAGCGGGGCGTGGGGTATGAGCTTCATGGTCTaGAAGCTAGTCCAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LQMEARGITRQRVSGAWGMSFMV*KLVQGP Trigger: TGGGCCCTGGACTAGCTTGCAGACCATGAAGCTCAT...ACCCCACGCCCCGCTCACTCTCTGCCGAGTAATGCCACGGGCCTCCATTTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CCA 90 bp | CTTCAAATGGAGGCCCGTGGCATTACTCGGCAGAGAGTGAGCGGGGCGTGGGGTTCTGGTGGCAACTCTTaGCTCCAGGCCAAAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: LQMEARGITRQRVSGAWGSGGNS*LQAKGI Trigger: TATCCCTTTGGCCTGGAGCCAAGAGTTGCCACCAGA...ACCCCACGCCCCGCTCACTCTCTGCCGAGTAATGCCACGGGCCTCCATTTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAATGGAGGCCCGTGGCATTACTCGGCAGAGAGTGAGCGGGGCGTGGGGTGAAAAGGTGAATGTCTaGAAGACATCAGCTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LQMEARGITRQRVSGAWGEKVNV*KTSAPA Trigger: AGCGGGAGCTGATGTCTTGCAGACATTCACCTTTTC...ACCCCACGCCCCGCTCACTCTCTGCCGAGTAATGCCACGGGCCTCCATTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCAGGTGGGGCTTGTGGCTAATTCCTCCTGTCTTGTCACTTCAGAGTTCTGTGCATGTCCCCCTCTaGGCCGATGCACATGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GSRWGLWLIPPVLSLQSSVHVPL*ADAHGH Trigger: GTGACCATGTGCATCGGCCCAGAGGGGGACATGCAC...AGAACTCTGAAGTGACAAGACAGGAGGAATTAGCCACAAGCCCCACCTGGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAACTGGGCCGATGCACATaGTCACAGCCACAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ESKSSIAYIFRSQSAREQLGRCT*SQPQVP Trigger: GGGCACCTGTGGCTGTGACCATGTGCATCGGCCCAG...TTGCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAAGGTTCCAGGTGGGGCTTGTGGCTAATTCCTCCTGTCTTGTCACTTCACCACAGTCCGGTGTGTaGAAGCCCAAGCACTGGACC | + |
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Preference number: 4 (lower is better) Translates to: QERFQVGLVANSSCLVTSPQSGV*KPKHWT Trigger: GGTCCAGTGCTTGGGCTTCCACACACCGGACTGTGG...TGAAGTGACAAGACAGGAGGAATTAGCCACAAGCCCCACCTGGAACCTTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CAA 72 bp | GAGCCAGAGCGCAAGAGAGCAAGAGCAAGAGCTCTATaGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EPERKRARARAL*LTSLGARAQES Trigger: GCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTTGCTCTCTTGCGCTCTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | AGATTATTTGTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTGCAATGGCCCCCCTCTGGGCCGATaGACATGGTCACAGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RLFVYHLEHRMSAPSCNGPPLGR*TWSQPQ Trigger: CTGTGGCTGTGACCATGTGCATCGGCCCAGAGGGGG...GCCATTGCAAGATGGCGCTGACATCCTGTGTTCTAAGTGGTAAACAAATAATCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CAA 72 bp | GCTGAAGACAGCAGCAAGAAAGGTTCCAGGTGGGGCTaGTGGCTAATTCCTCCTGTCTTGTCACTTCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: AEDSSKKGSRWG*WLIPPVLSLQS Trigger: ACTCTGAAGTGACAAGACAGGAGGAATTAGCCACAAGCCCCACCTGGAACCTTTCTTGCTGCTGTCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAACTCTCTTTTCCAGAGTaGAGAGAAAGCCGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ESKSSIAYIFRSQSAREQLSFPE*RESRCP Trigger: GGGACAGCGGCTTTCTCTTCACTCTGGAAAAGAGAG...TTGCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | GAATGTCAAATCCACCCTGAGAGCCAACTCTGGCCATGCCCAATGACCTTCAAATGGATGTTCTACCACTaGTTCTGGAGTCCAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ECQIHPESQLWPCPMTFKWMFYH*FWSPKP Trigger: GGGCTTTGGACTCCAGAAGCAGTGGTAGAACATCCA...TTTGAAGGTCATTGGGCATGGCCAGAGTTGGCTCTCAGGGTGGATTTGACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CAA 72 bp | TCCTGGAAAGCCAAGCATCATGACTGTTCAATAGCCTaGCCATCACTCACAACAGCTTTGGCCTCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SWKAKHHDCSIA*PSLTTALASLL Trigger: GAGAAGAGAGGCCAAAGCTGTTGTGAGTGATGGCAAGGCTATTGAACAGTCATGATGCTTGGCTTTCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR TCA 90 bp | CTTGCAAGGTTCATGTGTTTTGCTTTAATCAGCAAGTGTTTCCCTGAGCATTGGGTGGTACTTGTAGAGTaGTGTCTGGCAGATGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LARFMCFALISKCFPEHWVVLVE*CLADAP Trigger: GGGGGCATCTGCCAGACATCACTCTACAAGTACCAC...CCAATGCTCAGGGAAACACTTGCTGATTAAAGCAAAACACATGAACCTTGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | ATTATTCACCAAGGTTGCTTCTTGCTGACTTGGGATTATTTGAGAATGTCAAATGGTCACAGCCACAGGTaGCCCCACCTCTCTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: IIHQGCFLLTWDYLRMSNGHSHR*PHLSQD Trigger: GTCTTGAGAGAGGTGGGGGCACCTGTGGCTGTGACC...ATTTGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCAACCTTGGTGAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | ATTATTCACCAAGGTTGCTTCTTGCTGACTTGGGATTATTTGAGAATGTCAAATGTGATGTCTGGCAGATaGCCCCTGCCACCAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: IIHQGCFLLTWDYLRMSNVMSGR*PLPPKH Trigger: GTGCTTTGGTGGCAGGGGGCATCTGCCAGACATCAC...ATTTGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCAACCTTGGTGAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CAA 72 bp | CACCAGAATTATTCACCAAGGTTGCTTCTTGCTGACTaGGGATTATTTGAGAATGTCAAATCCACCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: HQNYSPRLLLAD*GLFENVKSTLR Trigger: TCTCAGGGTGGATTTGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCAACCTTGGTGAATAATTCTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| 3UTR CAA 72 bp | AGCTTCAACACCAGAATTATTCACCAAGGTTGCTTCTaGCTGACTTGGGATTATTTGAGAATGTCAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: SFNTRIIHQGCF*LTWDYLRMSNP Trigger: TGGATTTGACATTCTCAAATAATCCCAAGTCAGCAAGAAGCAACCTTGGTGAATAATTCTGGTGTTGAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | GTTTATAATCTAGCCATGCATGGCTATAAAGATGCACTTACAAATTCCAGGACTACAGCTTCTTCCACATaGTCAAAATACTCTGCAATC | + |
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Preference number: 4 (lower is better) Translates to: VYNLAMHGYKDALTNSRTTASST*SKYSAI Trigger: GATTGCAGAGTATTTTGAGCATGTGGAAGAAGCTGT...AGTCCTGGAATTTGTAAGTGCATCTTTATAGCCATGCATGGCTAGATTATAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR GCA 90 bp | ATCTTACTCATTGTTACACACTGCTACACTGAAGTGAAAAACAGAAAAGTGGGGATGCTCAAAATACTCTaGAATCAAGAAGTCCACATT | + |
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Preference number: 4 (lower is better) Translates to: ILLIVTHCYTEVKNRKVGMLKIL*NQEVHI Trigger: AATGTGGACTTCTTGATTGCAGAGTATTTTGAGCAT...CCCCACTTTTCTGTTTTTCACTTCAGTGTAGCAGTGTGTAACAATGAGTAAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS CCA 90 bp | CTCCAGGTGTCACGTCGTGCATGTCCCCCTCTGGGCCGATGCACATaGTCACAGCCACAGGTGCCCCCACCTCTCTCAAGACTTCGACAG | + |
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Preference number: 5 (lower is better) Translates to: LQVSRRACPPLGRCT*SQPQVPPPLSRLRQ Trigger: CTGTCGAAGTCTTGAGAGAGGTGGGGGCACCTGTGGCTGTGACCATGTGCATCGGCCCAGAGGGGGACATGCACGACGTGACACCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS GCA 90 bp | TGCAGGCTGGCATCTCTGAGGCCCTCTTTCATGAGCTTCATGGTCTaGAAGCTAGTCCAGGGCCCAAACCGGCAGTTGACCCCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: CRLASLRPSFMSFMV*KLVQGPNRQLTPMM Trigger: CATCATTGGGGTCAACTGCCGGTTTGGGCCCTGGACTAGCTTGCAGACCATGAAGCTCATGAAAGAGGGCCTCAGAGATGCCAGCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAATCCAAGATGCCCTTCTaGGCTCGAGTGCTTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ESKSSIAYIFRSQSAREQSKMPF*ARVLPA Trigger: AGCTGGAAGCACTCGAGCCAAGAAGGGCATCTTGGA...TTGCTCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CAA 90 bp | CTTGCAAGGTTCATGTGTTTTGCTTTAATCAGCAAGTGTTTCCCTGAGCATTGGGTTGACGAACTGCACTaGGATGTTCTACCACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LARFMCFALISKCFPEHWVDELH*DVLPLL Trigger: AAGCAGTGGTAGAACATCCAAGTGCAGTTCGTCAAC...CCAATGCTCAGGGAAACACTTGCTGATTAAAGCAAAACACATGAACCTTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CAA 90 bp | GAGACTGTAGCTCAAGACCTAGCTTCAACACCAGAATTATTCACCAAGGTTGCTCACTTGCTGGCCATATaGTCTTCAGTAGCAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: ETVAQDLASTPELFTKVAHLLAI*SSVAEK Trigger: CTTTTCTGCTACTGAAGACAATATGGCCAGCAAGTG...AGCAACCTTGGTGAATAATTCTGGTGTTGAAGCTAGGTCTTGAGCTACAGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS-3UTR CAA 90 bp | AGATTATTTGTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTGCAATGGCTTCACAGCTTCCCACTaGCTGGCCATATTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RLFVYHLEHRMSAPSCNGFTASH*LAILSS Trigger: TGAAGACAATATGGCCAGCAAGTGGGAAGCTGTGAA...GCCATTGCAAGATGGCGCTGACATCCTGTGTTCTAAGTGGTAAACAAATAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS GCA 72 bp | CAACCACCACCTCCCCGCTGTCCAGACGCTCCAAGATaGCCTTCTTGGCTCGAGTGCTTCCAGCTGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: QPPPPRCPDAPR*PSWLECFQLVP Trigger: TGGCACCAGCTGGAAGCACTCGAGCCAAGAAGGGCATCTTGGAGCGTCTGGACAGCGGGGAGGTGGTGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS CCA 72 bp | TCACGTCGTGCATGTCCCCCTCTGGGCCGATGCACATaGTCACAGCCACAGGTGCCCCCACCTCTCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRRACPPLGRCT*SQPQVPPPLSR Trigger: TCTTGAGAGAGGTGGGGGCACCTGTGGCTGTGACCATGTGCATCGGCCCAGAGGGGGACATGCACGACGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS TCA 72 bp | TCCGGTGTGTGGAAGCCCAAGCACTGGACCATAAGGTaGGCCTGCAGGCTGGCATCTCTGAGGCCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SGVWKPKHWTIR*ACRLASLRPSF Trigger: GAAAGAGGGCCTCAGAGATGCCAGCCTGCAGGCTCACCTTATGGTCCAGTGCTTGGGCTTCCACACACCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS GCA 72 bp | GCATCTCTGAGGCCCTCTTTCATGAGCTTCATGGTCTaGAAGCTAGTCCAGGGCCCAAACCGGCAGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: ASLRPSFMSFMV*KLVQGPNRQLT Trigger: GGTCAACTGCCGGTTTGGGCCCTGGACTAGCTTGCAGACCATGAAGCTCATGAAAGAGGGCCTCAGAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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| CDS CAA 72 bp | GCAGCTGCATTCACAGCTTCCCACTTGCTGGCCATATaGTCTTCAGTAGCAGAAAAGGTGAATGTCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AAAFTASHLLAI*SSVAEKVNVCK Trigger: CTTGCAGACATTCACCTTTTCTGCTACTGAAGACAATATGGCCAGCAAGTGGGAAGCTGTGAATGCAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015941.8 |
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