Pregenerated sensors for BHLHE41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030256Ensembl transcript IDs: ENSMUST00000032386.11, ENSMUST00000111703.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCGCTGCAGGGCGCGCGCCCAGAGCCCCTGCCGGAGGGCACCTGTaGCGTCAGGAGCTGGGTGGCCACGGCATGCAGGTGGCTGACGAG | + |
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Preference number: 1 (lower is better) Translates to: RAAGRAPRAPAGGHL*RQELGGHGMQVADE Trigger: CTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGCGCCCTGCAGCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR CCA 90 bp | GCGCGCCCAGAGCCCCTGCCGGAGGGCACCTGTGGCGTCAGGAGCTaGGTGGCCACGGCATGCAGGTGGCTGACGAGCTGTGCGCAGCGC | + |
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Preference number: 1 (lower is better) Translates to: ARPEPLPEGTCGVRS*VATACRWLTSCAQR Trigger: GCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR GCA 90 bp | CTGCCGGAGGGCACCTGTGGCGTCAGGAGCTGGGTGGCCACGGCATaGAGGTGGCTGACGAGCTGTGCGCAGCGCGGCTCCCTGGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: LPEGTCGVRSWVATA*RWLTSCAQRGSLGV Trigger: GACACCCAGGGAGCCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR CCA 90 bp | GAGGGCACCTGTGGCGTCAGGAGCTGGGTGGCCACGGCATGCAGGTaGCTGACGAGCTGTGCGCAGCGCGGCTCCCTGGGTGTCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: EGTCGVRSWVATACR*LTSCAQRGSLGVQL Trigger: GAGCTGGACACCCAGGGAGCCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR GCA 90 bp | CGTCAGGAGCTGGGTGGCCACGGCATGCAGGTGGCTGACGAGCTGTaGGCAGCGCGGCTCCCTGGGTGTCCAGCTCTCAAAGCGCGCGAG | + |
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Preference number: 1 (lower is better) Translates to: RQELGGHGMQVADEL*AARLPGCPALKARE Trigger: CTCGCGCGCTTTGAGAGCTGGACACCCAGGGAGCCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR TCA 90 bp | CTCTCAAAGCGCGCGAGGTATTGCAAGACTTCTTTGGCGCAGGTTTaGAACCCCGAGTGGAACGCATCCAAGTCGGCCTGGACCGGCGAT | + |
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Preference number: 1 (lower is better) Translates to: LSKRARYCKTSLAQV*NPEWNASKSAWTGD Trigger: ATCGCCGGTCCAGGCCGACTTGGATGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR GCA 90 bp | AAAGGCGCCAAGGCTCCAACCTCCCTCTTCCAGCTCCCACCACAGTaGCTCAAGATGGCCCAACTCTCAATTTCTCCCAACAGGTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: KGAKAPTSLFQLPPQ*LKMAQLSISPNRCK Trigger: CTTGCACCTGTTGGGAGAAATTGAGAGTTGGGCCATCTTGAGGCACTGTGGTGGGAGCTGGAAGAGGGAGGTTGGAGCCTTGGCGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CCA 90 bp | TGGGTGTCCAGCTCTCAAAGCGCGCGAGGTATTGCAAGACTTCTTTaGCGCAGGTTTGAAACCCCGAGTGGAACGCATCCAAGTCGGCCT | + |
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Preference number: 1 (lower is better) Translates to: WVSSSQSARGIARLL*RRFETPSGTHPSRP Trigger: AGGCCGACTTGGATGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTTGAGAGCTGGACACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR GCA 90 bp | CATCTGACACAACTGCTCCGGATGGGCCGGCCCAAGTGCAAACACTaGACACACAAAAACACATCGTGTTACATTGATGCTCCCATCCCT | + |
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Preference number: 1 (lower is better) Translates to: HLTQLLRMGRPKCKH*THKNTSCYIDAPIP Trigger: AGGGATGGGAGCATCAATGTAACACGATGTGTTTTTGTGTGTGCAGTGTTTGCACTTGGGCCGGCCCATCCGGAGCAGTTGTGTCAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR TCA 90 bp | TCTGTGACCTTGCCTGACTTTCTTCCCTTACAGAGTTCAGGGGACTaGCCTAGCAGATGTATGAGCTGTGGCTTCCGGTTTACCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: SVTLPDFLPLQSSGD*PSRCMSCGFRFTMP Trigger: AGGCATGGTAAACCGGAAGCCACAGCTCATACATCTGCTAGGTCAGTCCCCTGAACTCTGTAAGGGAAGAAAGTCAGGCAAGGTCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR GCA 90 bp | GGCAAGGCCTTCTCTATGTTCACAGCACTTCCCATCACAAGGGACTaGAAGCCCCTCTCTCCACTTCTGTCATCTAAGAATTCAACAATC | + |
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Preference number: 1 (lower is better) Translates to: GKAFSMFTALPITRD*KPLSPLLSSKNSTI Trigger: GATTGTTGAATTCTTAGATGACAGAAGTGGAGAGAGGGGCTTGCAGTCCCTTGTGATGGGAAGTGCTGTGAACATAGAGAAGGCCTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR TCA 90 bp | TCTTCTGGTATCTGGTTTTGGTCTCCCGAAAAATACATACAGCCTTaGGAGGCCTGGCAAGGCCTTCTCTATGTTCACAGCACTTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: SSGIWFWSPEKYIQP*EAWQGLLYVHSTSH Trigger: ATGGGAAGTGCTGTGAACATAGAGAAGGCCTTGCCAGGCCTCTCAAGGCTGTATGTATTTTTCGGGAGACCAAAACCAGATACCAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR GCA 90 bp | GGGCGCGCGCCCAGAGCCCCTGCCGGAGGGCACCTGTGGCGTCAGGAGCTGGGTAGCGCTCCCCTAGGGTaGACGGGGGAGGGAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: GRAPRAPAGGHLWRQELGSAPLG*TGEGGE Trigger: CTCGCCTCCCTCCCCCGTGCACCCTAGGGGAGCGCT...ACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGCGCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGCTGGGTGGCCACGGCATGCAGGTGGCTGACGAGCTGTGCGCAGCGCGGATTGCAAGACTTCTTTaGCGCAGGTTTGAAACCCCG | + |
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Preference number: 2 (lower is better) Translates to: QELGGHGMQVADELCAARIARLL*RRFETP Trigger: CGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAAT...CCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR CAA 90 bp | GCAGCGCGGCTCCCTGGGTGTCCAGCTCTCAAAGCGCGCGAGGTATaGCAAGACTTCTTTGGCGCAGGTTTGAAACCCCGAGTGGAACGC | + |
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Preference number: 2 (lower is better) Translates to: AARLPGCPALKAREV*QDFFGAGLKPRVER Trigger: GCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTTGAGAGCTGGACACCCAGGGAGCCGCGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR CAA 90 bp | GCTCTCAAAGCGCGCGAGGTATTGCAAGACTTCTTTGGCGCAGGTTaGAAACCCCGAGTGGAACGCATCCAAGTCGGCCTGGACCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: ALKAREVLQDFFGAG*KPRVERIQVGLDRR Trigger: TCGCCGGTCCAGGCCGACTTGGATGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTTGAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACAACCATGGGACTAGAATaGCAGGTAGAGTTTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: CPALSSQGLKQSPPMERTTMGLE*QVEFHS Trigger: GCTGTGAAACTCTACCTGGCATTCTAGTCCCATGGT...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACAGATTGTCCAAAGTCCTaGGTACCATCCCTAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: CPALSSQGLKQSPPMERTDCPKS*VPSLET Trigger: TGTTTCTAGGGATGGTACTCAGGACTTTGGACAATC...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAATCAGGGAGGCTCCTTaGCAGCAGGGACGGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NHANVNCCIFFSVVTIMAIREAP*QQGRGR Trigger: CCTCCCCCGTCCCTGCTGTCAAGGAGCCTCCCTGAT...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR CCA 90 bp | AATGGACCACCTCCTAAGGGGACAGTTGGGAGACACATCTACTGTTCCAGGCTTTTAAGTCATTCCACATaGCTCTCCCACCCAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: NGPPPKGTVGRHIYCSRLLSHST*LSHPTD Trigger: GTCTGTTGGGTGGGAGAGCCATGTGGAATGACTTAA...AAGCCTGGAACAGTAGATGTGTCTCCCAACTGTCCCCTTAGGAGGTGGTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CAA 90 bp | TTCTTCTGGTATCTGGTTTTGGTCTCCCGAAAAATACATACAGCCTaGAGAGGCCTGGCAAGGCCTTCTCTATGTTCACAGCACTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FFWYLVLVSRKIHTA*RGLARPSLCSQHFP Trigger: TGGGAAGTGCTGTGAACATAGAGAAGGCCTTGCCAGGCCTCTCAAGGCTGTATGTATTTTTCGGGAGACCAAAACCAGATACCAGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACATGTACTAAGTTCAGCTaGTGTTTCAAATCTTCTACC | + |
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Preference number: 2 (lower is better) Translates to: CPALSSQGLKQSPPMERTCTKFS*CFKSST Trigger: GGTAGAAGATTTGAAACATCAGCTGAACTTAGTACA...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTCCCATCACAAGGGACTaGAAGCCCCTCTCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: FKRMLFLLLSSETISTRLPITRD*KPLSPL Trigger: AAGTGGAGAGAGGGGCTTGCAGTCCCTTGTGATGGG...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTCACCCAACAGACTCCTaGACCAGAGTCTGTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: FKRMLFLLLSSETISTRLHPTDS*TRVCIW Trigger: CCAAATACAGACTCTGGTTCAGGAGTCTGTTGGGTG...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR GCA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTAATTTGTCAATAAAGTaGGAGCAAAGGCGCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFNLSIK*EQRRQG Trigger: GCCTTGGCGCCTTTGCTCGCACTTTATTGACAAATT...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTAGTCAGCAGAGGGAGTaGTTCCCTTACAGTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FKRMLFLLLSSETISTRLSQQRE*FPYSFL Trigger: TAAGAAACTGTAAGGGAAGCACTCCCTCTGCTGACT...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGAGTGAACGAGAACTAAAGGTAAGGAGAGTAATAGAAGATAACCATTTAGGTGTGAAAGGGTACTaGGTGGGGTGGCAAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GKSERELKVRRVIEDNHLGVKGY*VGWQKG Trigger: ACCCTTTTGCCACCCCACCCAGTACCCTTTCACACC...TAAATGGTTATCTTCTATTACTCTCCTTACCTTTAGTTCTCGTTCACTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR CCA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCACAAGAGAGGGTATCTaGGGTCACAGACCCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGTREGI*GHRPKP Trigger: TGGTTTGGGTCTGTGACCCCAGATACCCTCTCTTGT...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CAA 90 bp | CCCTCTCTCCACTTCTGTCATCTAAGAATTCAACAATCAATCTGTTaGGACTTTTCTTTTCCCAGCCCAGAGCACTTTAACATCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: PSLHFCHLRIQQSIC*DFSFPSPEHFNIHV Trigger: GACATGGATGTTAAAGTGCTCTGGGCTGGGAAAAGAAAAGTCCAAACAGATTGATTGTTGAATTCTTAGATGACAGAAGTGGAGAGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CAA 90 bp | GCAGATGAGCTCAGGTCCTTGTACACAGCAGTCTCTGAAAACTCATaGGGTACCCAGTATCGTTTAATTATTAGACCATCGCATATCATA | + |
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Preference number: 2 (lower is better) Translates to: ADELRSLYTAVSENS*GTQYRLIIRPSHII Trigger: TATGATATGCGATGGTCTAATAATTAAACGATACTGGGTACCCAATGAGTTTTCAGAGACTGCTGTGTACAAGGACCTGAGCTCATCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR CCA 90 bp | AATGAAACATCTCTCCCCCTAGTGTGTTTCAGACCTGGGCAGAAGAGAAACAGCTCAGACATCATTAATTaGGAGTATCAACAGCTATGT | + |
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Preference number: 2 (lower is better) Translates to: NETSLPLVCFRPGQKRNSSDIIN*EYQQLC Trigger: ACATAGCTGTTGATACTCCCAATTAATGATGTCTGA...GCTGTTTCTCTTCTGCCCAGGTCTGAAACACACTAGGGGGAGAGATGTTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCGCTGACAGCATTAGCTaGATTTTGTTTCCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGADSIS*ILFPLP Trigger: GGGCAAAGGAAACAAAATTCAGCTAATGCTGTCAGC...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTCCCGTCCCTAGAAAATaGGATTTTTCTCTCAATTCT | + |
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Preference number: 2 (lower is better) Translates to: FKRMLFLLLSSETISTRLPVPRK*DFSLNS Trigger: AGAATTGAGAGAAAAATCTCATTTTCTAGGGACGGG...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTAGATATCAAATAATCTaGTGGGGAACTCTGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FKRMLFLLLSSETISTRLRYQII*WGTLLR Trigger: TCTCAGCAGAGTTCCCCATCAGATTATTTGATATCT...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAGGCAAAATATTTGCATaGATGAAACATCTCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: NHANVNCCIFFSVVTIMAGKIFA*MKHLSP Trigger: GGGGGAGAGATGTTTCATTCATGCAAATATTTTGCC...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTTCTGACTCAGCTGTTAATTCATTAAAATCAACCACTGACTCAAATAATCACAGTGCCTCAAGATaGCCCAACTCTCAATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: VGSDSAVNSLKSTTDSNNHSASR*PNSQFL Trigger: GAGAAATTGAGAGTTGGGCCATCTTGAGGCACTGTG...ATTATTTGAGTCAGTGGTTGATTTTAATGAATTAACAGCTGAGTCAGAACCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCCATATATGTGTGAGCTaGGACATGAAACAAAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGHICVS*DMKQRV Trigger: AACCCTTTGTTTCATGTCTCAGCTCACACATATATG...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCATATGTAACATTCAAGTaGGATTTCTCAGTGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: NHANVNCCIFFSVVTIMAYVTFK*DFSVLP Trigger: AGGTAGCACTGAGAAATCTCACTTGAATGTTACATA...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAAAATATTTGCATGAATaGAACATCTCTCCCCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: NHANVNCCIFFSVVTIMAKYLHE*NISPPS Trigger: ACTAGGGGGAGAGATGTTTCATTCATGCAAATATTT...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR CCA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCTCTGGTATCTGGTTTTaGTCTCCCGAAAAATACATA | + |
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Preference number: 2 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGSGIWF*SPEKYI Trigger: TATGTATTTTTCGGGAGACCAAAACCAGATACCAGA...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTTCTGACTCAGCTGTTAATTCATTAAAATCAACCACTGACTCAAATAATTGTATTTGGAAAGAGTaGACGAGAACTAAAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: VGSDSAVNSLKSTTDSNNCIWKE*TRTKGK Trigger: CTTACCTTTAGTTCTCGTTCACTCTTTCCAAATACA...ATTATTTGAGTCAGTGGTTGATTTTAATGAATTAACAGCTGAGTCAGAACCCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CCA 72 bp | GGGCGCGCGCCCAGAGCCCCTGCCGGAGGGCACCTGTaGCGTCAGGAGCTGGGTGGCCACGGCATGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GRAPRAPAGGHL*RQELGGHGMQV Trigger: CACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR GCA 72 bp | GGCACCTGTGGCGTCAGGAGCTGGGTGGCCACGGCATaGAGGTGGCTGACGAGCTGTGCGCAGCGCGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GTCGVRSWVATA*RWLTSCAQRGS Trigger: GGAGCCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR CCA 72 bp | TGTGGCGTCAGGAGCTGGGTGGCCACGGCATGCAGGTaGCTGACGAGCTGTGCGCAGCGCGGCTCCCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: CGVRSWVATACR*LTSCAQRGSLG Trigger: ACCCAGGGAGCCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR CCA 72 bp | GAGCCCCTGCCGGAGGGCACCTGTGGCGTCAGGAGCTaGGTGGCCACGGCATGCAGGTGGCTGACGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: EPLPEGTCGVRS*VATACRWLTSC Trigger: ACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR GCA 72 bp | CTGGGTGGCCACGGCATGCAGGTGGCTGACGAGCTGTaGGCAGCGCGGCTCCCTGGGTGTCCAGCTCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LGGHGMQVADEL*AARLPGCPALK Trigger: TTTGAGAGCTGGACACCCAGGGAGCCGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| 3UTR TCA 72 bp | CTTACTCTTCCTCCCTGGCACGCTTTAGAGGACGTTTaGACTTGGAAACCCGGCGACTCCTCGGGAGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTLPPWHALEDV*TWKPGDSSGAP Trigger: GGGGGCTCCCGAGGAGTCGCCGGGTTTCCAAGTTCAAACGTCCTCTAAAGCGTGCCAGGGAGGAAGAGTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR TCA 72 bp | CGCGCGAGGTATTGCAAGACTTCTTTGGCGCAGGTTTaGAACCCCGAGTGGAACGCATCCAAGTCGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RARYCKTSLAQV*NPEWNASKSAW Trigger: CCAGGCCGACTTGGATGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| 3UTR TCA 72 bp | AATCAACCACTGACTCAAATAATAGCTTCCAGAGGCTaGGGGCCCAGGCCAGTGGTAGCACTCTGGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NQPLTQIIASRG*GPRPVVALWPR Trigger: TCTGGGCCAGAGTGCTACCACTGGCCTGGGCCCTCAGCCTCTGGAAGCTATTATTTGAGTCAGTGGTTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CCA 72 bp | AGCTCTCAAAGCGCGCGAGGTATTGCAAGACTTCTTTaGCGCAGGTTTGAAACCCCGAGTGGAACGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSQSARGIARLL*RRFETPSGTHP Trigger: TGGATGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTTGAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| 3UTR TCA 72 bp | ACAGTTAGCAGACTGGCTAGGGAAAGGCTGAAACCCTaGAAAAACAGATGTAGCCAGGTGTGGTGGCGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TVSRLARERLKP*KNRCSQVWWRL Trigger: GAGGCGCCACCACACCTGGCTACATCTGTTTTTTCAGGGTTTCAGCCTTTCCCTAGCCAGTCTGCTAACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR GCA 72 bp | CATCTGACACAACTGCTCCGGATGGGCCGGCCCAAGTaGAAACACTGCACACACAAAAACACATCGTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HLTQLLRMGRPK*KHCTHKNTSCY Trigger: GTAACACGATGTGTTTTTGTGTGTGCAGTGTTTGCACTTGGGCCGGCCCATCCGGAGCAGTTGTGTCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR TCA 72 bp | AGCAGTCACCTCCTATGGAGAGGACAAACACTTGACTaGCCAGTGACAGAAAAGGACCAGGCTAAGGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: SSHLLWRGQTLD*PVTEKDQAKVT Trigger: GGTGACCTTAGCCTGGTCCTTTTCTGTCACTGGTCAGTCAAGTGTTTGTCCTCTCCATAGGAGGTGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR TCA 72 bp | AAACCAGGTATGTGTTGGAGGCCTCTCTCTGACCACTaGGAAGTGACAGTTAGCAGACTGGCTAGGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KPGMCWRPLSDH*EVTVSRLARER Trigger: CCTTTCCCTAGCCAGTCTGCTAACTGTCACTTCTCAGTGGTCAGAGAGAGGCCTCCAACACATACCTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR GCA 72 bp | CAACTGCTCCGGATGGGCCGGCCCAAGTGCAAACACTaGACACACAAAAACACATCGTGTTACATTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLRMGRPKCKH*THKNTSCYIDA Trigger: AGCATCAATGTAACACGATGTGTTTTTGTGTGTGCAGTGTTTGCACTTGGGCCGGCCCATCCGGAGCAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAACATCTCTCCCCCTAGTGTGTTTCAGACCTGGGCAGAAGAGAAACAGCCGCTTTAGAGGACGTTaGAACTTGGAAACCCGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: NETSLPLVCFRPGQKRNSRFRGR*NLETRR Trigger: TCGCCGGGTTTCCAAGTTCAAACGTCCTCTAAAGCG...GCTGTTTCTCTTCTGCCCAGGTCTGAAACACACTAGGGGGAGAGATGTTTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR TCA 72 bp | TTGCCTGACTTTCTTCCCTTACAGAGTTCAGGGGACTaGCCTAGCAGATGTATGAGCTGTGGCTTCCGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPDFLPLQSSGD*PSRCMSCGFRF Trigger: AAACCGGAAGCCACAGCTCATACATCTGCTAGGTCAGTCCCCTGAACTCTGTAAGGGAAGAAAGTCAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACATTCTGGTATCTGGTTTaGGTCTCCCGAAAAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: CPALSSQGLKQSPPMERTFWYLV*VSRKIH Trigger: ATGTATTTTTCGGGAGACCAAAACCAGATACCAGAA...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAACATCTCTCCCCCTAGTGTGTTTCAGACCTGGGCAGAAGAGAAACAGCGATGAGCTCAGGTCCTaGTACACAGCAGTCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: NETSLPLVCFRPGQKRNSDELRS*YTAVSE Trigger: TTCAGAGACTGCTGTGTACAAGGACCTGAGCTCATC...GCTGTTTCTCTTCTGCCCAGGTCTGAAACACACTAGGGGGAGAGATGTTTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR TCA 72 bp | ATCTGGTTTTGGTCTCCCGAAAAATACATACAGCCTTaGGAGGCCTGGCAAGGCCTTCTCTATGTTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: IWFWSPEKYIQP*EAWQGLLYVHS Trigger: GCTGTGAACATAGAGAAGGCCTTGCCAGGCCTCTCAAGGCTGTATGTATTTTTCGGGAGACCAAAACCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR TCA 72 bp | CAAGGCTCTACAGAGCCTCTAGCTGACAGCATTAGCTaGATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QGSTEPLADSIS*ILFPLPPWLVC Trigger: ACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAGCTAATGCTGTCAGCTAGAGGCTCTGTAGAGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR GCA 72 bp | TTCTCTATGTTCACAGCACTTCCCATCACAAGGGACTaGAAGCCCCTCTCTCCACTTCTGTCATCTAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSMFTALPITRD*KPLSPLLSSKN Trigger: ATTCTTAGATGACAGAAGTGGAGAGAGGGGCTTGCAGTCCCTTGTGATGGGAAGTGCTGTGAACATAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR GCA 72 bp | TTGTCACAGTCAGCTTGTCACAGTCAGCAGAGGGAGTaGTTCCCTTACAGTTTCTTAGAAACTGTCACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSQSACHSQQRE*FPYSFLETVTH Trigger: ATGAGTGACAGTTTCTAAGAAACTGTAAGGGAAGCACTCCCTCTGCTGACTGTGACAAGCTGACTGTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCCCGGTTTACCATGCCTaGTCACAGTCAGCTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGPVYHA*SQSACH Trigger: GTGACAAGCTGACTGTGACAAGGCATGGTAAACCGG...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCACTCCTAAGGGGACAGTaGGGAGACACATCTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NHANVNCCIFFSVVTIMALLRGQ*GDTSTV Trigger: AACAGTAGATGTGTCTCCCAACTGTCCCCTTAGGAG...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAGTGCCTCTGTGACCTaGCCTGACTTTCTTCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGSASVT*PDFLPL Trigger: TAAGGGAAGAAAGTCAGGCAAGGTCACAGAGGCACT...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTAGCATTCTCACTTCTTaGAAAATAGGTACCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFSILTS*KIGTFQ Trigger: TTGGAAGGTACCTATTTTCAAAGAAGTGAGAATGCT...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTTGCAAATGTCAACTGTaGCATCTTCTTTTCAGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: FKRMLFLLLSSETISTRLCKCQL*HLLFSR Trigger: ACGACTGAAAAGAAGATGCAACAGTTGACATTTGCA...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAGAGAAAAGCCTAAAATaGTTTCCTGAACTCCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NHANVNCCIFFSVVTIMAEKSLK*FPELQG Trigger: GCCTTGGAGTTCAGGAAACAATTTTAGGCTTTTCTC...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR-3UTR CAA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCACAACAATCAATCTGTTaGGACTTTTCTTTTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NHANVNCCIFFSVVTIMAQQSIC*DFSFPS Trigger: GCTGGGAAAAGAAAAGTCCAAACAGATTGATTGTTG...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR GCA 90 bp | TCCCTGGCACGCTTTAGAGGACGTTTGAACTTGGAAACCCGGCGACTCCTCGGGCGGCCGCTGCTGGGATaGCGGGATACAGCAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLARFRGRLNLETRRLLGRPLLG*RDTAAG Trigger: TCCCGCTGCTGTATCCCGGCATCCCAGCAGCGGCCG...CCCGAGGAGTCGCCGGGTTTCCAAGTTCAAACGTCCTCTAAAGCGTGCCAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR TCA 90 bp | GCGCGCGCCCAGAGCCCCTGCCGGAGGGCACCTGTGGCGTCAGGAGCTGGGTGGAAAGCAATTATCTTCTaGTGCTGCTGCTCAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARAQSPCRRAPVASGAGWKAIIF*CCCSVK Trigger: CTTAACTGAGCAGCAGCATCAGAAGATAATTGCTTT...CCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| CDS-3UTR TCA 90 bp | AATGGACCACCTCCTAAGGGGACAGTTGGGAGACACATCTACTGTTCCAGGCTTCGGCATGCAGGTGGCTaGCGAGCTGTGCGCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NGPPPKGTVGRHIYCSRLRHAGG*RAVRSA Trigger: CGCGCTGCGCACAGCTCGTCAGCCACCTGCATGCCG...AAGCCTGGAACAGTAGATGTGTCTCCCAACTGTCCCCTTAGGAGGTGGTCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACATGGGTGGCCACGGCATaGAGGTGGCTGACGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPALSSQGLKQSPPMERTWVATA*RWLTSC Trigger: ACAGCTCGTCAGCCACCTGCATGCCGTGGCCACCCA...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR TCA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTCGGGTGGCTCCTGCTTaGCGGCCGCGCGGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFRVAPA*RPRGPA Trigger: AGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCG...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | GCGCGCGAGGTATTGCAAGACTTCTTTGGCGCAGGTTaGAAACCCCGAGTGGAACGCATCCAAGTCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AREVLQDFFGAG*KPRVERIQVGL Trigger: CAGGCCGACTTGGATGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTGGCTCCGTGCCGGGCTaGGTCCGCTGGATGACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFGSVPG*VRWMTG Trigger: GCCGGTCATCCAGCGGACTCAGCCCGGCACGGAGCC...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | CTCCCTGGGTGTCCAGCTCTCAAAGCGCGCGAGGTATaGCAAGACTTCTTTGGCGCAGGTTTGAAACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGCPALKAREV*QDFFGAGLKPR Trigger: TCGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTTGAGAGCTGGACACCCAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTGTGGCGTCAGGAGCTGGGTGGCCACGGCATGCAGGTGGCTGACGAGGTTAGCGCTTTCAAGTaGTTTAAAGTTAATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLWRQELGGHGMQVADEVSAFK*FKVNSK Trigger: CTTGGAATTAACTTTAAAGCACTTGAAAGCGCTAAC...CTCGTCAGCCACCTGCATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGCCTGGACCGGCGATTTCAGAGAGCGCTCCCCTAGGGTGCACGGGGGAGCTTCAAGCTCCTTTTaGGTTTACACATATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSAWTGDFRERSPRVHGGASSSF*VYTYTK Trigger: CTTTGTATATGTGTAAACCCAAAAGGAGCTTGAAGC...TCCCCCGTGCACCCTAGGGGAGCGCTCTCTGAAATCGCCGGTCCAGGCCGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| CDS-3UTR CCA 90 bp | AATGGACCACCTCCTAAGGGGACAGTTGGGAGACACATCTACTGTTCCAGGCTTGCATCCAAGTCGGCCTaGACCGGCGATTTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGPPPKGTVGRHIYCSRLASKSA*TGDFRE Trigger: CTCTCTGAAATCGCCGGTCCAGGCCGACTTGGATGC...AAGCCTGGAACAGTAGATGTGTCTCCCAACTGTCCCCTTAGGAGGTGGTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | GACTCTCAGGTAATGGACCACCTCCTAAGGGGACAGTaGGGAGACACATCTACTGTTCCAGGCTTGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DSQVMDHLLRGQ*GDTSTVPGLGR Trigger: TCGACCCAAGCCTGGAACAGTAGATGTGTCTCCCAACTGTCCCCTTAGGAGGTGGTCCATTACCTGAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR TCA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAGCTGAGTCCGCTGGATaGCCGGCACGCAGCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NHANVNCCIFFSVVTIMAAESAG*PARSGR Trigger: TCGCCCGCTGCGTGCCGGTCATCCAGCGGACTCAGC...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR CCA 90 bp | TTCAAGAGAATGTTATTCTTACTGCTATCCTCCGAAACCATTAGCACCCGGCTTCGCAGCGCGGCTCCCTaGGTGTCCAGCTCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKRMLFLLLSSETISTRLRSAAP*VSSSQS Trigger: GCTTTGAGAGCTGGACACCCAGGGAGCCGCGCTGCG...AAGCCGGGTGCTAATGGTTTCGGAGGATAGCAGTAAGAATAACATTCTCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR GCA 90 bp | TTGAAACCCCGAGTGGAACGCATCCAAGTCGGCCTGGACCGGCGATTTCAGAGAACTGCTTTCTCCAAATaGCCCAGTGTTGTCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKPRVERIQVGLDRRFQRTAFSK*PSVVNF Trigger: GAAATTGACAACACTGGGGCATTTGGAGAAAGCAGT...TCTCTGAAATCGCCGGTCCAGGCCGACTTGGATGCGTTCCACTCGGGGTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
||
| 3UTR CAA 72 bp | CGGAAAGCGTCCAAGTACGCAGATGAGCTCAGGTCCTaGTACACAGCAGTCTCTGAAAACTCATTGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RKASKYADELRS*YTAVSENSLGT Trigger: GGTACCCAATGAGTTTTCAGAGACTGCTGTGTACAAGGACCTGAGCTCATCTGCGTACTTGGACGCTTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACAGTTAGCGCTTTCAAGTaGTTTAAAGTTAATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPALSSQGLKQSPPMERTVSAFK*FKVNSK Trigger: CTTGGAATTAACTTTAAAGCACTTGAAAGCGCTAAC...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | TATCTGGTTTTGGTCTCCCGAAAAATACATACAGCCTaGAGAGGCCTGGCAAGGCCTTCTCTATGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YLVLVSRKIHTA*RGLARPSLCSQ Trigger: CTGTGAACATAGAGAAGGCCTTGCCAGGCCTCTCAAGGCTGTATGTATTTTTCGGGAGACCAAAACCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | GAAGAAACCATCCCTGAGAATGTAAGCATACATGATTaGCTTACAGCAGGGCCTTTGGGGCCTCTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EETIPENVSIHD*LTAGPLGPLSE Trigger: TTCAGACAGAGGCCCCAAAGGCCCTGCTGTAAGCAAATCATGTATGCTTACATTCTCAGGGATGGTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR GCA 90 bp | AACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCAAAGCGCGCGAGGTATTaGAAGACTTCTTTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHANVNCCIFFSVVTIMAKRARY*KTSLAQ Trigger: CTGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTT...TGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAGTGAACGAGAACTAAAGGTAAGGAGAGTAATAGAAGATAACCATTTATCTTTGGCGCAGGTTTaGAACCCCGAGTGGAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKSERELKVRRVIEDNHLSLAQV*NPEWNA Trigger: TGCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGA...TAAATGGTTATCTTCTATTACTCTCCTTACCTTTAGTTCTCGTTCACTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | CTCAGGTCCTTGTACACAGCAGTCTCTGAAAACTCATaGGGTACCCAGTATCGTTTAATTATTAGACCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LRSLYTAVSENS*GTQYRLIIRPS Trigger: CGATGGTCTAATAATTAAACGATACTGGGTACCCAATGAGTTTTCAGAGACTGCTGTGTACAAGGACCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR TCA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTAAAGCAATTATCTTCTaGTGCTGCTGCTCAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFKAIIF*CCCSVK Trigger: CTTAACTGAGCAGCAGCATCAGAAGATAATTGCTTT...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| CDS-3UTR CCA 90 bp | GGAAAGAGTGAACGAGAACTAAAGGTAAGGAGAGTAATAGAAGATAACCATTTAATTGCAAGACTTCTTTaGCGCAGGTTTGAAACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSERELKVRRVIEDNHLIARLL*RRFETP Trigger: CGGGGTTTCAAACCTGCGCCAAAGAAGTCTTGCAAT...TAAATGGTTATCTTCTATTACTCTCCTTACCTTTAGTTCTCGTTCACTCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
||
| 3UTR CAA 72 bp | CACAGGTATGATCTTAAGCTTGAGAAAAGCCTAAAATaGTTTCCTGAACTCCAAGGCAAACTCCCAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: HRYDLKLEKSLK*FPELQGKLPIP Trigger: TGGTATTGGGAGTTTGCCTTGGAGTTCAGGAAACAATTTTAGGCTTTTCTCAAGCTTAAGATCATACCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CAA 72 bp | CACTTCTGTCATCTAAGAATTCAACAATCAATCTGTTaGGACTTTTCTTTTCCCAGCCCAGAGCACTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: HFCHLRIQQSIC*DFSFPSPEHFN Trigger: GTTAAAGTGCTCTGGGCTGGGAAAAGAAAAGTCCAAACAGATTGATTGTTGAATTCTTAGATGACAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR GCA 90 bp | GGAAAGAGTGAACGAGAACTAAAGGTAAGGAGAGTAATAGAAGATAACCATTTAACTGCTTTCTCCAAATaGCCCAGTGTTGTCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: GKSERELKVRRVIEDNHLTAFSK*PSVVNF Trigger: GAAATTGACAACACTGGGGCATTTGGAGAAAGCAGT...TAAATGGTTATCTTCTATTACTCTCCTTACCTTTAGTTCTCGTTCACTCTTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CCA 90 bp | AAACCATGCAAATGTCAACTGTTGCATCTTCTTTTCAGTCGTGACAATAATGGCGCTTCAAGCTCCTTTTaGGTTTACACATATACAAAG | + |
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Preference number: 4 (lower is better) Translates to: KPCKCQLLHLLFSRDNNGASSSF*VYTYTK Trigger: CTTTGTATATGTGTAAACCCAAAAGGAGCTTGAAGC...GCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| 3UTR CAA 72 bp | CTATTACATGTTACAAAACCATGCAAATGTCAACTGTaGCATCTTCTTTTCAGTCGTGACAATAATGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LLHVTKPCKCQL*HLLFSRDNNGN Trigger: GTTGCCATTATTGTCACGACTGAAAAGAAGATGCAACAGTTGACATTTGCATGGTTTTGTAACATGTAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS GCA 90 bp | AGGCGGCCGCAGCCCCCGCGCTGCAGGGCGCGCGCCCAGAGCCCCTaGCGGAGGGCACCTGTGGCGTCAGGAGCTGGGTGGCCACGGCAT | + |
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Preference number: 5 (lower is better) Translates to: RRPQPPRCRARAQSP*RRAPVASGAGWPRH Trigger: ATGCCGTGGCCACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGCGCCCTGCAGCGCGGGGGCTGCGGCCGCCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CCA 90 bp | CGCCTCCAGCTTCGGCCTCTTGGGCGCAGGCGACGAGTCCCCGGGTaGCTCCTGCTTGACGGCCGCGCGGCCCTGCTCCGCCTCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RLQLRPLGRRRRVPG*LLLDGRAALLRLAS Trigger: GGAGGCGAGGCGGAGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCAAGAGGCCGAAGCTGGAGGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS TCA 90 bp | TGTCCGTGTCGTGTTCCGGCTCCGTGCCGGGCTGAGTCCGCTGGATaGCCGGCACGCAGCGGGCGACGCGCTCGGGACCCGAGGCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: CPCRVPAPCRAESAG*PARSGRRARDPRRP Trigger: CGGCCGCCTCGGGTCCCGAGCGCGTCGCCCGCTGCGTGCCGGTCATCCAGCGGACTCAGCCCGGCACGGAGCCGGAACACGACACGGACA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS TCA 90 bp | TCGGCCTCTTGGGCGCAGGCGACGAGTCCCCGGGTGGCTCCTGCTTaGCGGCCGCGCGGCCCTGCTCCGCCTCGCCTCCGTAGCCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SASWAQATSPRVAPA*RPRGPAPPRLRSRC Trigger: ACAGCGGCTACGGAGGCGAGGCGGAGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCAAGAGGCCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CAA 90 bp | GGGCGCGCGCCCAGAGCCCCTGCCGGAGGGCACCTGTGGCGTCAGGAGCTGGGTCGCTTCAAGCTCCTTTaGGGTTTACACATATACAAA | + |
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Preference number: 5 (lower is better) Translates to: GRAPRAPAGGHLWRQELGRFKLL*GLHIYK Trigger: TTTGTATATGTGTAAACCCAAAAGGAGCTTGAAGCG...ACCCAGCTCCTGACGCCACAGGTGCCCTCCGGCAGGGGCTCTGGGCGCGCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| CDS-3UTR CAA 90 bp | AGTCGGCCTGGACCGGCGATTTCAGAGAGCGCTCCCCTAGGGTGCACGGGGGAGCCAAATGCCCCAGTGTaGTCAATTTCAGATGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: SRPGPAISESAPLGCTGEPNAPV*SISDVR Trigger: CCGAACATCTGAAATTGACAACACTGGGGCATTTGG...CTCCCCCGTGCACCCTAGGGGAGCGCTCTCTGAAATCGCCGGTCCAGGCCGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111703.2 |
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| CDS-3UTR CAA 90 bp | TGTCCAGCCCTGTCTTCCCAAGGTCTCAAGCAGTCACCTCCTATGGAGAGGACACGCTTCAAGCTCCTTTaGGGTTTACACATATACAAA | + |
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Preference number: 5 (lower is better) Translates to: CPALSSQGLKQSPPMERTRFKLL*GLHIYK Trigger: TTTGTATATGTGTAAACCCAAAAGGAGCTTGAAGCG...TGTCCTCTCCATAGGAGGTGACTGCTTGAGACCTTGGGAAGACAGGGCTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CAA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTTTCTTTGGCGCAGGTTaGAAACCCCGAGTGGAACGC | + |
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Preference number: 5 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFFFGAG*KPRVER Trigger: GCGTTCCACTCGGGGTTTCAAACCTGCGCCAAAGAA...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CAA 90 bp | CTGAATTTTGTTTCCTTTGCCCCCGTGGTTGGTTTGTTCAGTTTCAGGAGCTTTAAAGCGCGCGAGGTATaGCAAGACTTCTTTGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: LNFVSFAPVVGLFSFRSFKAREV*QDFFGA Trigger: TGCGCCAAAGAAGTCTTGCAATACCTCGCGCGCTTT...AAAGCTCCTGAAACTGAACAAACCAACCACGGGGGCAAAGGAAACAAAATTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CAA 90 bp | GTGGGTTCTGACTCAGCTGTTAATTCATTAAAATCAACCACTGACTCAAATAATTTGTCCAGGCCGCTCTaGTCTAGCCAGGGCTGTACG | + |
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Preference number: 5 (lower is better) Translates to: VGSDSAVNSLKSTTDSNNLSRPL*SSQGCT Trigger: CGTACAGCCCTGGCTAGACAAGAGCGGCCTGGACAA...ATTATTTGAGTCAGTGGTTGATTTTAATGAATTAACAGCTGAGTCAGAACCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGTGAACGAGAACTAAAGGTAAGGAGAGTAATAGAAGATAACCATTTAGCGGGGTACAGATACTaGTCCAGGCCGCTCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GKSERELKVRRVIEDNHLAGYRY*SRPLLS Trigger: AGACAAGAGCGGCCTGGACAAGTATCTGTACCCCGC...TAAATGGTTATCTTCTATTACTCTCCTTACCTTTAGTTCTCGTTCACTCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGTGAACGAGAACTAAAGGTAAGGAGAGTAATAGAAGATAACCATTTACCAAATGCCCCAGTGTaGTCAATTTCAGATGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: GKSERELKVRRVIEDNHLPNAPV*SISDVR Trigger: CCGAACATCTGAAATTGACAACACTGGGGCATTTGG...TAAATGGTTATCTTCTATTACTCTCCTTACCTTTAGTTCTCGTTCACTCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CAA 90 bp | GGCTCCGGGCCCAGGAGCGCGCCGCGCGCCTCCAGCTTCGGCCTCTaGGGCGCAGGCGACGAGTCCCCGGGTGGCTCCTGCTTGACGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSGPRSAPRASSFGL*GAGDESPGGSCLTA Trigger: GGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCAAGAGGCCGAAGCTGGAGGCGCGCGGCGCGCTCCTGGGCCCGGAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS TCA 72 bp | TGGGCGCAGGCGACGAGTCCCCGGGTGGCTCCTGCTTaGCGGCCGCGCGGCCCTGCTCCGCCTCGCCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: WAQATSPRVAPA*RPRGPAPPRLR Trigger: ACGGAGGCGAGGCGGAGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CAA 72 bp | TTGGGCGCAGGCGACGAGTCCCCGGGTGGCTCCTGCTaGACGGCCGCGCGGCCCTGCTCCGCCTCGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LGAGDESPGGSC*TAARPCSASPP Trigger: CGGAGGCGAGGCGGAGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS TCA 72 bp | CGTGTTCCGGCTCCGTGCCGGGCTGAGTCCGCTGGATaGCCGGCACGCAGCGGGCGACGCGCTCGGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: RVPAPCRAESAG*PARSGRRARDP Trigger: CGGGTCCCGAGCGCGTCGCCCGCTGCGTGCCGGTCATCCAGCGGACTCAGCCCGGCACGGAGCCGGAACACG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS GCA 72 bp | CTCTTGGGCGCAGGCGACGAGTCCCCGGGTGGCTCCTaGTTGACGGCCGCGCGGCCCTGCTCCGCCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLGAGDESPGGS*LTAARPCSASP Trigger: AGGCGAGGCGGAGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCAAGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS GCA 72 bp | GAGAGCTCTCCGGGTTCACAGCGCGCGGCAGGTGGGTaGGGCTATGCGCGTGCTGGGGGCGCAGCGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: ESSPGSQRAAGG*GYARAGGAAAP Trigger: CGGGGCCGCTGCGCCCCCAGCACGCGCATAGCCGCACCCACCTGCCGCGCGCTGTGAACCCGGAGAGCTCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CCA 72 bp | CTTCGGCCTCTTGGGCGCAGGCGACGAGTCCCCGGGTaGCTCCTGCTTGACGGCCGCGCGGCCCTGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LRPLGRRRRVPG*LLLDGRAALLR Trigger: GCGGAGCAGGGCCGCGCGGCCGTCAAGCAGGAGCCACCCGGGGACTCGTCGCCTGCGCCCAAGAGGCCGAAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CCA 72 bp | CGGGGCACCGGCGGTCGCGCCGGCCTTCTCCGGGGGTaGCGACAGCACGGACGACAAGCAAGGGAAAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RGTGGRAGLLRG*RQHGRQARESG Trigger: GCCGCTTTCCCTTGCTTGTCGTCCGTGCTGTCGCCACCCCCGGAGAAGGCCGGCGCGACCGCCGGTGCCCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS TCA 72 bp | TCGGTGTCCGTGTCGTGTTCCGGCTCCGTGCCGGGCTaGGTCCGCTGGATGACCGGCACGCAGCGGGCGACG | + |
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Preference number: 6 (lower is better) Translates to: SVSVSCSGSVPG*VRWMTGTQRAT Trigger: CGTCGCCCGCTGCGTGCCGGTCATCCAGCGGACTCAGCCCGGCACGGAGCCGGAACACGACACGGACACCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS TCA 72 bp | CAGGGGGCGTCCTTGGCCGGCTGCGTGGCATCTTCCTaGGAGCTCTCCGGGTTCACAGCGCGCGGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QGASLAGCVASS*ELSGFTARGRW Trigger: CCACCTGCCGCGCGCTGTGAACCCGGAGAGCTCTCAGGAAGATGCCACGCAGCCGGCCAAGGACGCCCCCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CAA 72 bp | AGCGGGAAGGGCGCGGCCGCCGCGGGGTACAGATACTaGTCCAGGCCGCTCTTGTCTAGCCAGGGCTGTACG | + |
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Preference number: 6 (lower is better) Translates to: SGKGAAAAGYRY*SRPLLSSQGCT Trigger: CGTACAGCCCTGGCTAGACAAGAGCGGCCTGGACAAGTATCTGTACCCCGCGGCGGCCGCGCCCTTCCCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032386.11 |
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| CDS CCA 72 bp | AGGTATCCTTGGTATCGTCTCGCTTCAAGCTCCTTTTaGGTTTACACATATACAAAGAGGAATAGTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RYPWYRLASSSF*VYTYTKRNSPV Trigger: GACTGGACTATTCCTCTTTGTATATGTGTAAACCCAAAAGGAGCTTGAAGCGAGACGATACCAAGGATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032386.11 ENSMUST00000111703.2 |
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