Pregenerated sensors for BHLHB9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072964Ensembl transcript IDs: ENSMUST00000068755.14, ENSMUST00000148374.8, ENSMUST00000180025.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTATTATGCAAAACTCTTTaGGCATGTACAGCCAATCAA | + |
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Preference number: 2 (lower is better) Translates to: AVVSLLLSGATNRSKQILLCKTL*ACTANQ Trigger: TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAA...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAAGACACAGTACTTCTGAGAGTTGGATCACAGTTTCCTTAAGTAAAATGTTATGCAAAACTCTTTaGGCATGTACAGCCAATCAA | + |
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Preference number: 2 (lower is better) Translates to: PSRHSTSESWITVSLSKMLCKTL*ACTANQ Trigger: TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAA...CATTTTACTTAAGGAAACTGTGATCCAACTCTCAGAAGTACTGTGTCTTGAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| 3UTR-3UTR CAA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCACAGCCAATCAAATTTaGGACACTGTTCAGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: VVSLLLSGATNRSKQILTTANQI*DTVQCS Trigger: AGAACACTGAACAGTGTCCAAAATTTGATTGGCTGT...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCAGCAGCCTCCCTCTCTaGCACAGCTCTGGCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTSSLPL*HSSGLC Trigger: GCACAAGCCAGAGCTGTGGCAGAGAGGGAGGCTGCT...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAAGCAGCCTCCCTCTCTaGCACAGCTCTGGCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILSSLPL*HSSGLC Trigger: GCACAAGCCAGAGCTGTGGCAGAGAGGGAGGCTGCT...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTACTTTCCCTTAGACCCTaGCTTCACCTCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILLSLRP*LHLCHC Trigger: GCAGTGGCAGAGGTGAAGGCAGGGTCTAAGGGAAAG...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGAGCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCGTGGCTGGTCCTAGGTaGGGGCTCCTCAGCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVSSNYQNIMQNSLGMYSVAGPR*GLLSTS Trigger: GCTCGTGCTGAGGAGCCCGCACCTAGGACCAGCCAC...GCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTATCTCTGCCACAGCTCTaGCTTGTGCACTTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILSLPQL*LVHLPF Trigger: AAAGGGCAAGTGCACAAGCCAGAGCTGTGGCAGAGA...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCGGACCTTGCCTCAGATaGATCCTGGGATCTATAACC | + |
|
Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTGPCLR*ILGSIT Trigger: GGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCC...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAGGCCAGAACAATGTATaGAGAGGACCTTGCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILGQNNV*RGPCLR Trigger: TCTGAGGCAAGGTCCTCTTCATACATTGTTCTGGCC...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCCTTTCCCTTAGACCCTaGCTTCACCTCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFLSLRP*LHLCHC Trigger: GCAGTGGCAGAGGTGAAGGCAGGGTCTAAGGGAAAG...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAGTCTTACGATTTCCCTaGGACAGCAAATGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILVLRFP*DSKWKS Trigger: GCTTTTCCATTTGCTGTCTCAGGGAAATCGTAAGAC...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | CCCTCAAGACACAGTACTTCTGAGAGTTGGATCACAGTTTCCTTAAGTAAAATGAATAGCACTCCAGTTTaGAAGGGCAAGCGAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRHSTSESWITVSLSKMNSTPV*KGKRRA Trigger: AGCCCTTCGCTTGCCCTTGCAAACTGGAGTGCTATT...CATTTTACTTAAGGAAACTGTGATCCAACTCTCAGAAGTACTGTGTCTTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTATCTCAGTCCTATGGTTaGAATCTGAGGTGCCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILSQSYG*NLRCLL Trigger: TAAAAGGCACCTCAGATTTCAACCATAGGACTGAGA...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCTCCTGGGCAAATGGATaGACCTTATGTATACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTSWANG*TLCIPI Trigger: AATGGGTATACATAAGGTTCATCCATTTGCCCAGGA...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCCATCTAAGGTCTGGATaGAAGGATCAGAACCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTHLRSG*KDQNQM Trigger: CATTTGGTTCTGATCCTTGCATCCAGACCTTAGATG...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAGACTCGGTAGTCAGCTaGCCTATTATCTTTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILDSVVS*PIIFNP Trigger: TGGATTAAAGATAATAGGGCAGCTGACTACCGAGTC...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCGACTCGGTAGTCAGCTaGCCTATTATCTTTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTDSVVS*PIIFNP Trigger: TGGATTAAAGATAATAGGGCAGCTGACTACCGAGTC...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | ATTTATTTGATACATCAAAAATGGTCTAGCTTTGAGCTAGAACCTGCCACAGGTTCTCTGCCACAGCTCTaGCTTGTGCACTTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IYLIHQKWSSFELEPATGSLPQL*LVHLPF Trigger: AAAGGGCAAGTGCACAAGCCAGAGCTGTGGCAGAGA...ACCTGTGGCAGGTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCAAATAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTGTCTTACGATTTCCCTaGGACAGCAAATGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKLFGHVQPIKFWTLFSVVLRFP*DSKWKS Trigger: GCTTTTCCATTTGCTGTCTCAGGGAAATCGTAAGAC...AACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATACATCAAAAATGGTCTAGCTTTGAGCTAGAACCTGCCACAGGTAATAGCACTCCAGTTTaGAAGGGCAAGCGAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYLIHQKWSSFELEPATGNSTPV*KGKRRA Trigger: AGCCCTTCGCTTGCCCTTGCAAACTGGAGTGCTATT...ACCTGTGGCAGGTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCAAATAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCTCCTCAGCACGAGCCTaGATACTAGTACTAGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFSSARA*ILVLGL Trigger: TAAACCTAGTACTAGTATCCAGGCTCGTGCTGAGGA...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAATTTCATCTAAGGTCTaGATGCAAGGATCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILISSKV*MQGSEP Trigger: TGGTTCTGATCCTTGCATCCAGACCTTAGATGAAAT...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCGAATTCCTGGGCAAATaGATGAACCTTATGTATACC | + |
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Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTEFLGK*MNLMYT Trigger: GGTATACATAAGGTTCATCCATTTGCCCAGGAATTC...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCTCTCAGTCCTATGGTTaGAATCTGAGGTGCCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFSQSYG*NLRCLL Trigger: TAAAAGGCACCTCAGATTTCAACCATAGGACTGAGA...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAAGGACCTTGCCTCAGATaGATCCTGGGATCTATAACC | + |
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Preference number: 4 (lower is better) Translates to: AVITKILCKTLWACTANQGPCLR*ILGSIT Trigger: GGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCC...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTACAAATGGAAAAGCTCTaGAAAGTAGCTGACTACAAT | + |
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Preference number: 4 (lower is better) Translates to: AVVSLLLSGATNRSKQILQMEKL*KVADYN Trigger: ATTGTAGTCAGCTACTTTTCAGAGCTTTTCCATTTG...TAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCACCAGTTATCACTACTaGGCTTATCTTTACGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFTSYHY*AYLYVW Trigger: CCACACGTAAAGATAAGCCCAGTAGTGATAACTGGT...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCTATTTATCATATCTCTaGCTGCCTTGGGATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVSLLLSGATNRSKQILTYLSYL*LPWDFQ Trigger: CTGAAAATCCCAAGGCAGCCAGAGATATGATAAATA...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCTATCATATCTCTGGCTaGCTTGGGATTTTCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFYHISG*LGIFRH Trigger: ATGTCTGAAAATCCCAAGGCAGCCAGAGATATGATA...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGAGCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCTCCTGGGCAAATGGATaGACCTTATGTATACCCATT | + |
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Preference number: 4 (lower is better) Translates to: CVSSNYQNIMQNSLGMYSSWANG*TLCIPI Trigger: AATGGGTATACATAAGGTTCATCCATTTGCCCAGGA...GCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAACATCTAAGGTCTGGATaGAAGGATCAGAACCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: AVITKILCKTLWACTANQHLRSG*KDQNQM Trigger: CATTTGGTTCTGATCCTTGCATCCAGACCTTAGATG...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATACATCAAAAATGGTCTAGCTTTGAGCTAGAACCTGCCACAGGTTATCATATCTCTGGCTaGCTTGGGATTTTCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: IYLIHQKWSSFELEPATGYHISG*LGIFRH Trigger: ATGTCTGAAAATCCCAAGGCAGCCAGAGATATGATA...ACCTGTGGCAGGTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCAAATAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAAACCAGTTATCACTACTaGGCTTATCTTTACGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AVITKILCKTLWACTANQTSYHY*AYLYVW Trigger: CCACACGTAAAGATAAGCCCAGTAGTGATAACTGGT...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGAGCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCAGGATCAGAACCAAATaGATACTCAGGTATAGACTG | + |
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Preference number: 4 (lower is better) Translates to: CVSSNYQNIMQNSLGMYSRIRTK*ILRYRL Trigger: CAGTCTATACCTGAGTATCCATTTGGTTCTGATCCT...GCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | CCCTCAAGACACAGTACTTCTGAGAGTTGGATCACAGTTTCCTTAAGTAAAATGAAGCTTTTCAAATTCTaGAGAATCCAAATAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: PSRHSTSESWITVSLSKMKLFKF*RIQIAL Trigger: GAGTGCTATTTGGATTCTCCAGAATTTGAAAAGCTT...CATTTTACTTAAGGAAACTGTGATCCAACTCTCAGAAGTACTGTGTCTTGAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCAAGCTTTTCAAATTCTaGAGAATCCAAATAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFKLFKF*RIQIAL Trigger: GAGTGCTATTTGGATTCTCCAGAATTTGAAAAGCTT...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGAGCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCGAATTCCTGGGCAAATaGATGAACCTTATGTATACC | + |
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Preference number: 4 (lower is better) Translates to: CVSSNYQNIMQNSLGMYSEFLGK*MNLMYT Trigger: GGTATACATAAGGTTCATCCATTTGCCCAGGAATTC...GCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGAGCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCATCGACTACTACAATTaGACCCTTTCTAATATGCTC | + |
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Preference number: 4 (lower is better) Translates to: CVSSNYQNIMQNSLGMYSIDYYN*TLSNML Trigger: GAGCATATTAGAAAGGGTTCAATTGTAGTAGTCGAT...GCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTTGATACATCAAAAATGGTCTAGCTTTGAGCTAGAACCTGCCACAGGTATCGACTACTACAATTaGACCCTTTCTAATATGCTC | + |
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Preference number: 4 (lower is better) Translates to: IYLIHQKWSSFELEPATGIDYYN*TLSNML Trigger: GAGCATATTAGAAAGGGTTCAATTGTAGTAGTCGAT...ACCTGTGGCAGGTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCAAATAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAAAGGATCAGAACCAAATaGATACTCAGGTATAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: AVITKILCKTLWACTANQRIRTK*ILRYRL Trigger: CAGTCTATACCTGAGTATCCATTTGGTTCTGATCCT...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAAATTTCATCTAAGGTCTaGATGCAAGGATCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AVITKILCKTLWACTANQISSKV*MQGSEP Trigger: TGGTTCTGATCCTTGCATCCAGACCTTAGATGAAAT...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGAGCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCTATTTATCATATCTCTaGCTGCCTTGGGATTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CVSSNYQNIMQNSLGMYSYLSYL*LPWDFQ Trigger: CTGAAAATCCCAAGGCAGCCAGAGATATGATAAATA...GCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAACAAATGGAAAAGCTCTaGAAAGTAGCTGACTACAAT | + |
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Preference number: 4 (lower is better) Translates to: AVITKILCKTLWACTANQQMEKL*KVADYN Trigger: ATTGTAGTCAGCTACTTTTCAGAGCTTTTCCATTTG...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CCA 90 bp | CTAGACTTGTGGCTGGTCCTAGGTGCGGGCTCCTCAGCACGAGCCTaGATACTAGTACTAGGTTTATTTTCACACTTAGCAACAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: LDLWLVLGAGSSARA*ILVLGLFSHLATEL Trigger: TAATTCTGTTGCTAAGTGTGAAAATAAACCTAGTACTAGTATCCAGGCTCGTGCTGAGGAGCCCGCACCTAGGACCAGCCACAAGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | GTAGTTTCTCTTTTGCTCTCTGGAGCCACCAACAGATCTAAGCAGATACTAACCTGTATGAAGAGGACCTaGCCTCAGATGAATCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: VVSLLLSGATNRSKQILTCMKRT*PQMNPG Trigger: CCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACA...GGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCTGTATGAAGAGGACCTaGCCTCAGATGAATCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFCMKRT*PQMNPG Trigger: CCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACA...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTTTCTCAGTCCTATGGTaGAAATCTGAGGTGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: AKLFGHVQPIKFWTLFSVFSVLW*KSEVPF Trigger: AAAAGGCACCTCAGATTTCAACCATAGGACTGAGAA...AACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | CCCTCAAGACACAGTACTTCTGAGAGTTGGATCACAGTTTCCTTAAGTAAAATGAAGTTTCCTCTTCATTaGAGGCCAGAACAATGTATG | + |
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Preference number: 5 (lower is better) Translates to: PSRHSTSESWITVSLSKMKFPLH*RPEQCM Trigger: CATACATTGTTCTGGCCTCAAATGAAGAGGAAACTT...CATTTTACTTAAGGAAACTGTGATCCAACTCTCAGAAGTACTGTGTCTTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | CAAAACTCTTTGGGCATGTACAGCCAATCAAATTTTGGACACTGTTCAGTGTTCAAGTTTCCTCTTCATTaGAGGCCAGAACAATGTATG | + |
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Preference number: 5 (lower is better) Translates to: QNSLGMYSQSNFGHCSVFKFPLH*RPEQCM Trigger: CATACATTGTTCTGGCCTCAAATGAAGAGGAAACTT...GAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTTGATACATCAAAAATGGTCTAGCTTTGAGCTAGAACCTGCCACAGGTTTCTCAGTCCTATGGTaGAAATCTGAGGTGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: IYLIHQKWSSFELEPATGFSVLW*KSEVPF Trigger: AAAAGGCACCTCAGATTTCAACCATAGGACTGAGAA...ACCTGTGGCAGGTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCAAATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS-3UTR CAA 90 bp | GCAGTAATTACCAAAATATTATGCAAAACTCTTTGGGCATGTACAGCCAATCAAGTGGATCTAGCAAACTaGTTCTCAGTCCTATGGTTG | + |
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Preference number: 5 (lower is better) Translates to: AVITKILCKTLWACTANQVDLAN*FSVLWL Trigger: CAACCATAGGACTGAGAACAAGTTTGCTAGATCCAC...TTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CAA 72 bp | CCTTTCCCTTTGTCCCGGCTTTTGCCTGCACCTCGGTaGGCATTAGCAGCCTCCCTCTCTGCCACAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PFPLSRLLPAPR*ALAASLSATAL Trigger: CAGAGCTGTGGCAGAGAGGGAGGCTGCTAATGCCAACCGAGGTGCAGGCAAAAGCCGGGACAAAGGGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068755.14 ENSMUST00000148374.8 ENSMUST00000180025.8 |
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| CDS CAA 72 bp | TTAGAGCCTGCCTTACCTTTCCCTTTGTCCCGGCTTTaGCCTGCACCTCGGTTGGCATTAGCAGCCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LEPALPFPLSRL*PAPRLALAASL Trigger: GAGGGAGGCTGCTAATGCCAACCGAGGTGCAGGCAAAAGCCGGGACAAAGGGAAAGGTAAGGCAGGCTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068755.14 ENSMUST00000148374.8 ENSMUST00000180025.8 |
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| CDS CAA 90 bp | GCATCTGATTTAGAGCCTGCCTTACCTTTCCCTTTGTCCCGGCTTTaGCCTGCACCTCGGTTGGCATTAGCAGCCTCCCTCTCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ASDLEPALPFPLSRL*PAPRLALAASLSAT Trigger: TGTGGCAGAGAGGGAGGCTGCTAATGCCAACCGAGGTGCAGGCAAAAGCCGGGACAAAGGGAAAGGTAAGGCAGGCTCTAAATCAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068755.14 ENSMUST00000148374.8 ENSMUST00000180025.8 |
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| CDS CAA 90 bp | ACCTCTGCCACTGCATCTGATTTAGAGCCTGCCTTACCTTTCCCTTaGTCCCGGCTTTTGCCTGCACCTCGGTTGGCATTAGCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSATASDLEPALPFP*SRLLPAPRLALAAS Trigger: GGAGGCTGCTAATGCCAACCGAGGTGCAGGCAAAAGCCGGGACAAAGGGAAAGGTAAGGCAGGCTCTAAATCAGATGCAGTGGCAGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068755.14 ENSMUST00000148374.8 ENSMUST00000180025.8 |
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| CDS CCA 72 bp | TGGCTGGTCCTAGGTGCGGGCTCCTCAGCACGAGCCTaGATACTAGTACTAGGTTTATTTTCACACTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: WLVLGAGSSARA*ILVLGLFSHLA Trigger: TGCTAAGTGTGAAAATAAACCTAGTACTAGTATCCAGGCTCGTGCTGAGGAGCCCGCACCTAGGACCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CAA 90 bp | AAGTTTCCTCTTCATTTGAGGCCAGAACAATGTATGAAGAGGACCTaGCCTCAGATGAATCCTGGGATCTATAACCTAACACTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: KFPLHLRPEQCMKRT*PQMNPGIYNLTLLE Trigger: CTCCAGCAGTGTTAGGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACATTGTTCTGGCCTCAAATGAAGAGGAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CAA 72 bp | CTACTGGGCTTATCTTTACGTGTGGATCTAGCAAACTaGTTCTCAGTCCTATGGTTGAAATCTGAGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLGLSLRVDLAN*FSVLWLKSEVP Trigger: AGGCACCTCAGATTTCAACCATAGGACTGAGAACAAGTTTGCTAGATCCACACGTAAAGATAAGCCCAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CAA 72 bp | CTTCATTTGAGGCCAGAACAATGTATGAAGAGGACCTaGCCTCAGATGAATCCTGGGATCTATAACCTAACA | + |
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Preference number: 6 (lower is better) Translates to: LHLRPEQCMKRT*PQMNPGIYNLT Trigger: TGTTAGGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACATTGTTCTGGCCTCAAATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CAA 72 bp | CAAGCGAAGGGCTTGATGCCATTCTCTTCTCTGATCTaGATTTGCTGTCTAATTTCATCTAAGGTCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: QAKGLMPFSSLI*ICCLISSKVWM Trigger: CATCCAGACCTTAGATGAAATTAGACAGCAAATCAAGATCAGAGAAGAGAATGGCATCAAGCCCTTCGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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| CDS CCA 72 bp | CTGATCTTGATTTGCTGTCTAATTTCATCTAAGGTCTaGATGCAAGGATCAGAACCAAATGGATACTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LILICCLISSKV*MQGSEPNGYSG Trigger: ACCTGAGTATCCATTTGGTTCTGATCCTTGCATCCAGACCTTAGATGAAATTAGACAGCAAATCAAGATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068755.14 ENSMUST00000180025.8 |
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