Pregenerated sensors for BHLHA15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052271Ensembl transcript IDs: ENSMUST00000060747.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAGGAGGCTGAGGTCCCGCCAAACAGAGACCCTGGACAGCCCTaGGCATTAGGGCAGCCGGGCATTAGGGCAGAGGTTTGGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: SQEAEVPPNRDPGQP*ALGQPGIRAEVWLD Trigger: GTCCAGCCAAACCTCTGCCCTAATGCCCGGCTGCCCTAATGCCCAGGGCTGTCCAGGGTCTCTGTTTGGCGGGACCTCAGCCTCCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR GCA 90 bp | GGCAGGAACGCCCCAGGACGGAAGCTGGGCTTGAGGCTGCCTGGCTaGCAACCACTCACCCTCCTTATTAATGAGCAGGTTGGGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GRNAPGRKLGLRLPG*QPLTLLINEQVGGG Trigger: CCCTCCCCCAACCTGCTCATTAATAAGGAGGGTGAGTGGTTGGCAGCCAGGCAGCCTCAAGCCCAGCTTCCGTCCTGGGGCGTTCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | GGACAGCCCTGGGCATTAGGGCAGCCGGGCATTAGGGCAGAGGTTTaGCTGGACAAAAGGAGCCCCGCTCTGGCCTTGGCTCATACGGAA | + |
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Preference number: 1 (lower is better) Translates to: GQPWALGQPGIRAEV*LDKRSPALALAHTE Trigger: TTCCGTATGAGCCAAGGCCAGAGCGGGGCTCCTTTTGTCCAGCCAAACCTCTGCCCTAATGCCCGGCTGCCCTAATGCCCAGGGCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | TGTGCATCCTTGGTCAAAGGGCAGCAAGGACAGGTAGGCTTTCCCTaGAGAGTTGAAGGCCCAGATCACTCCCTTGTCCCCTGGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: CASLVKGQQGQVGFP*RVEGPDHSLVPWVA Trigger: AGCCACCCAGGGGACAAGGGAGTGATCTGGGCCTTCAACTCTCCAGGGAAAGCCTACCTGTCCTTGCTGCCCTTTGACCAAGGATGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR TCA 90 bp | TGGCTTTTTCCTGAGGCGTCACATGTCAGGTTTCTCTGCTTGTGCTaGCGTGAGGTTGGTGAGATCTGGAGGCCCAGGGCAAGTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: WLFPEASHVRFLCLC*REVGEIWRPRASLS Trigger: GGAGAGACTTGCCCTGGGCCTCCAGATCTCACCAACCTCACGTCAGCACAAGCAGAGAAACCTGACATGTGACGCCTCAGGAAAAAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | TGTGGCCAAGGGACATGTAGGTCCTGCCTGTCACCAGTAAAGAACTaGACAGCTAGGCCCATGTCACCCCCTAGGAAGCAGGGGTATACA | + |
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Preference number: 1 (lower is better) Translates to: CGQGTCRSCLSPVKN*TARPMSPPRKQGYT Trigger: TGTATACCCCTGCTTCCTAGGGGGTGACATGGGCCTAGCTGTCCAGTTCTTTACTGGTGACAGGCAGGACCTACATGTCCCTTGGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | GAAGATGCTCTAAGCCCCGGGTTCAGTTCCCAGCACTGTCTAAACTaGGTGTGGAGGTACATACCTCAGTCCCAGCACACGAGATCGAGG | + |
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Preference number: 1 (lower is better) Translates to: EDALSPGFSSQHCLN*VWRYIPQSQHTRSR Trigger: CCTCGATCTCGTGTGCTGGGACTGAGGTATGTACCTCCACACCCAGTTTAGACAGTGCTGGGAACTGAACCCGGGGCTTAGAGCATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | AACAACAAAACCCCCTCAGGGACCTCACTAGTGTCATTACCAGTCTaGAGCTTGCAGCACAGAGGGACAACAGCTGAGAAGAGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: NNKTPSGTSLVSLPV*SLQHRGTTAEKSRQ Trigger: CTGCCTGCTCTTCTCAGCTGTTGTCCCTCTGTGCTGCAAGCTCCAGACTGGTAATGACACTAGTGAGGTCCCTGAGGGGGTTTTGTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | CTAGAGAAGATGGAGGTGAGGAGGATCAGGAGTTCAAGGCCAGCTTaGGCCATGAGAGGGCTTATGTCAACAACAAAACCCCCTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LEKMEVRRIRSSRPA*AMRGLMSTTKPPQG Trigger: TCCCTGAGGGGGTTTTGTTGTTGACATAAGCCCTCTCATGGCCCAAGCTGGCCTTGAACTCCTGATCCTCCTCACCTCCATCTTCTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 90 bp | CTCTACCTGACCTACGGACGATCTAGGAAGGGACCAGACCAGGACTaGAAAGCTATACAAATCAAGTCTCACCAGGATAAGGAGACCAAC | + |
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Preference number: 1 (lower is better) Translates to: LYLTYGRSRKGPDQD*KAIQIKSHQDKETN Trigger: GTTGGTCTCCTTATCCTGGTGAGACTTGATTTGTATAGCTTTCCAGTCCTGGTCTGGTCCCTTCCTAGATCGTCCGTAGGTCAGGTAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR TCA 90 bp | GAAACAAGACGCCATCTTGGCTTTGCTGTATATTCCCTGAGGGATTaGGTGGCACTTTGGGTCCAGTTTCCCATAGCCCCACAATATTTA | + |
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Preference number: 1 (lower is better) Translates to: ETRRHLGFAVYSLRD*VALWVQFPIAPQYL Trigger: TAAATATTGTGGGGCTATGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAGCCAAGATGGCGTCTTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR TCA 90 bp | ACAGGTCTCTGGGCACCCATTCCTAGGACCAGAGTACAATGGCTGTaGAGTCTTCATTTTCAGGTACAGATGGCAATTTTACTAGTACTC | + |
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Preference number: 1 (lower is better) Translates to: TGLWAPIPRTRVQWL*SLHFQVQMAILLVL Trigger: GAGTACTAGTAAAATTGCCATCTGTACCTGAAAATGAAGACTTCACAGCCATTGTACTCTGGTCCTAGGAATGGGTGCCCAGAGACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTCATAAAGGCTCTGCCTGGTCCCCACACCAGAGCCTAGGTGTCCCGGGCGACCCTGGACAGCCCTaGGCATTAGGGCAGCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: PLHKGSAWSPHQSLGVPGDPGQP*ALGQPG Trigger: GCCCGGCTGCCCTAATGCCCAGGGCTGTCCAGGGTC...GCCCGGGACACCTAGGCTCTGGTGTGGGGACCAGGCAGAGCCTTTATGAAGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCCAGAGGGACAACAGCTaGGAAGAGCAGGCAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GIQKAACGGQRARRLRSRQRDNS*EEQAGS Trigger: GGAGCCTGCCTGCTCTTCTCAGCTGTTGTCCCTCTG...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCATTAGGGCAGAGGTTTGGCTGGACAAAAGGAGCCCCGCTCTGGCCTTGGGCTCAGTCCCCAGCGTaGCACCATGTCATGATGTAT | + |
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Preference number: 2 (lower is better) Translates to: RALGQRFGWTKGAPLWPWAQSPA*HHVMMY Trigger: ATACATCATGACATGGTGCCACGCTGGGGACTGAGC...CCAAGGCCAGAGCGGGGCTCCTTTTGTCCAGCCAAACCTCTGCCCTAATGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTCATAAAGGCTCTGCCTGGTCCCCACACCAGAGCCTAGGTGTCCCGGGCCAGGTAGGCTTTCCCTaGAGAGTTGAAGGCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PLHKGSAWSPHQSLGVPGQVGFP*RVEGPD Trigger: ATCTGGGCCTTCAACTCTCCAGGGAAAGCCTACCTG...GCCCGGGACACCTAGGCTCTGGTGTGGGGACCAGGCAGAGCCTTTATGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCATTAGGGCAGAGGTTTGGCTGGACAAAAGGAGCCCCGCTCTGGCCTTGGGCTGAGGCAGGAGGATaGACCAAGCACACGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RALGQRFGWTKGAPLWPWAEAGG*TKHTFK Trigger: TTTGAACGTGTGCTTGGTCCATCCTCCTGCCTCAGC...CCAAGGCCAGAGCGGGGCTCCTTTTGTCCAGCCAAACCTCTGCCCTAATGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CAA 90 bp | GAGGTCACCCTACGCTCCAGTTCCAAAAGAAGGAGCACCCTGGGCTaGGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: EVTLRSSSKRRSTLG*GQGDRAIGLPAIPD Trigger: GTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCCAAGCCCAGGGTGCTCCTTCTTTTGGAACTGGAGCGTAGGGTGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCGACAGCAAAGTAGTCTaGAGTGAAGCCCGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GIQKAACGGQRARRLRSRDSKVV*SEARQS Trigger: GCTCTGCCGGGCTTCACTTCAGACTACTTTGCTGTC...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCACTCCAGGTCAGTTCTaGGCAGAGAGACAAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GIQKAACGGQRARRLRSRTPGQF*AERQGR Trigger: CCTCCCTTGTCTCTCTGCCCAGAACTGACCTGGAGT...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTCATAAAGGCTCTGCCTGGTCCCCACACCAGAGCCTAGGTGTCCCGGGCCCACATGCTGGTGTCTaGGCTGAGTTTCAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PLHKGSAWSPHQSLGVPGPHAGV*AEFQGK Trigger: TTTTCCTTGAAACTCAGCTCAGACACCAGCATGTGG...GCCCGGGACACCTAGGCTCTGGTGTGGGGACCAGGCAGAGCCTTTATGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | CTATACAAATCAAGTCTCACCAGGATAAGGAGACCAACACCCCCAGGCCTAGTGGACGGAAGCTGGGCTTaGGGCTGCCTGGCTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LYKSSLTRIRRPTPPGLVDGSWA*GCLAAN Trigger: GTTGGCAGCCAGGCAGCCTCAAGCCCAGCTTCCGTC...CACTAGGCCTGGGGGTGTTGGTCTCCTTATCCTGGTGAGACTTGATTTGTATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCTACCAGTCTGGAGCTTaGAGCACAGAGGGACAACAG | + |
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Preference number: 2 (lower is better) Translates to: GIQKAACGGQRARRLRSRYQSGA*STEGQQ Trigger: CTGTTGTCCCTCTGTGCTGCAAGCTCCAGACTGGTA...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CAA 90 bp | CTGAGGCGTCACATGTCAGGTTTCTCTGCTTGTGCTGACGTGAGGTaGGTGAGATCTGGAGGCCCAGGGCAAGTCTCTCCATGTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRRHMSGFSACADVR*VRSGGPGQVSPCTE Trigger: CTCTGTACATGGAGAGACTTGCCCTGGGCCTCCAGATCTCACCAACCTCACGTCAGCACAAGCAGAGAAACCTGACATGTGACGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGATATTCCCTGAGGGATTaGGTGGCACTTTGGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GTGRQSNRASCYPRLLTGYSLRD*VALWVQ Trigger: CTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATA...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CAA 90 bp | CCTAGAGAAGATGGAGGTGAGGAGGATCAGGAGTTCAAGGCCAGCTaGGGCCATGAGAGGGCTTATGTCAACAACAAAACCCCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PREDGGEEDQEFKAS*GHERAYVNNKTPSG Trigger: CCCTGAGGGGGTTTTGTTGTTGACATAAGCCCTCTCATGGCCCAAGCTGGCCTTGAACTCCTGATCCTCCTCACCTCCATCTTCTCTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGAGGGACATGTAGGTCCTaGCTGTCACCAGTAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GTGRQSNRASCYPRLLTGGTCRS*LSPVKN Trigger: GTTCTTTACTGGTGACAGGCAGGACCTACATGTCCC...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGACAACCAAGAACACTGTaGGATACCAAGCACGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: GTGRQSNRASCYPRLLTGQPRTL*DTKHEV Trigger: TACCTCGTGCTTGGTATCTCACAGTGTTCTTGGTTG...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGGGGCCAACCAAGAACACTGTGAGATACCAAGCACGAGGTATACCCCTGTGGCTAGGAAAAACTaGCACATGCTGGTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SPGANQEHCEIPSTRYTPVARKN*HMLVSE Trigger: CTCAGACACCAGCATGTGGCAGTTTTTCCTAGCCAC...AGGGGTATACCTCGTGCTTGGTATCTCACAGTGTTCTTGGTTGGCCCCTGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCAACAAGACGCCATCTTaGCTTTGCTGTATATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GIQKAACGGQRARRLRSRNKTPS*LCCIFP Trigger: AGGGAATATACAGCAAAGCCAAGATGGCGTCTTGTT...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATGAGCAGGTTGGGGGAGGGACATGCCGGTCTCTCCAGCTTCCACCTCAGGGGAATCCTATAAAATaGGGAAACAAGACGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: INEQVGGGTCRSLQLPPQGNPIK*GNKTPS Trigger: AGATGGCGTCTTGTTTCCTCATTTTATAGGATTCCC...CTGAGGTGGAAGCTGGAGAGACCGGCATGTCCCTCCCCCAACCTGCTCATTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCCAAGGGACATGTAGGTCCTGCCTGTCACCAGTAAAGAACTGGACAGCTTTGCTGTATATTCCCTaGGGGATTGAGTGGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: CGQGTCRSCLSPVKNWTALLYIP*GIEWHF Trigger: AAAGTGCCACTCAATCCCTCAGGGAATATACAGCAA...AGCTGTCCAGTTCTTTACTGGTGACAGGCAGGACCTACATGTCCCTTGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CAA 90 bp | CCATCTTGGCTTTGCTGTATATTCCCTGAGGGATTGAGTGGCACTTaGGGTCCAGTTTCCCATAGCCCCACAATATTTAGGCTCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PSWLCCIFPEGLSGT*GPVSHSPTIFRLSS Trigger: ACTGCTGAGCCTAAATATTGTGGGGCTATGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAGCCAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGAGAGTTTCAAGGAAAATaGATTTACTGCGAGTCAACT | + |
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Preference number: 2 (lower is better) Translates to: GTGRQSNRASCYPRLLTGEFQGK*IYCEST Trigger: AGTTGACTCGCAGTAAATCCATTTTCCTTGAAACTC...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CAA 90 bp | GGAAACAAGACGCCATCTTGGCTTTGCTGTATATTCCCTGAGGGATaGAGTGGCACTTTGGGTCCAGTTTCCCATAGCCCCACAATATTT | + |
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Preference number: 2 (lower is better) Translates to: GNKTPSWLCCIFPEG*SGTLGPVSHSPTIF Trigger: AAATATTGTGGGGCTATGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAGCCAAGATGGCGTCTTGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR TCA 72 bp | AAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTaGGGTCCCGCCAAACAGAGACCCTGGACAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: KRQLVGDKEPGG*GPAKQRPWTAL Trigger: CAGGGCTGTCCAGGGTCTCTGTTTGGCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR GCA 72 bp | GCCCCAGGACGGAAGCTGGGCTTGAGGCTGCCTGGCTaGCAACCACTCACCCTCCTTATTAATGAGCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: APGRKLGLRLPG*QPLTLLINEQV Trigger: AACCTGCTCATTAATAAGGAGGGTGAGTGGTTGGCAGCCAGGCAGCCTCAAGCCCAGCTTCCGTCCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCTTCATAAAGGCTCTGCCTGGTCCCCACACCAGAGCCTAGGTGTCCCGGGCTATACAAAAGGCAGCTaGTGGGGGACAAAGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PLHKGSAWSPHQSLGVPGYTKGS*WGTKSQ Trigger: CTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATA...GCCCGGGACACCTAGGCTCTGGTGTGGGGACCAGGCAGAGCCTTTATGAAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR TCA 72 bp | GTCATGCCTGGCCTCCGCTCACACTGGCAAATTCCCTaGCCTTTCCCAGTAGCCGTCCCCAGTAACAGACAC | + |
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Preference number: 3 (lower is better) Translates to: VMPGLRSHWQIP*PFPVAVPSNRH Trigger: GTGTCTGTTACTGGGGACGGCTACTGGGAAAGGTCAGGGAATTTGCCAGTGTGAGCGGAGGCCAGGCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR GCA 72 bp | GGGCTTGGGACAGGGAGACAGAGCAATAGGGCTTCCTaGTATCCCAGACTCCTAACGGGACCGGAGTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: GLGTGRQSNRAS*YPRLLTGPESL Trigger: TAGAGACTCCGGTCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCCAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTGGGTGTGGGGTGTATGGGCCTCAAGGAACTCCAGGTCAGTTCTGGGCACGGTTGCTAGAGAGCTaGCTTAGTGCGCACACACAC | + |
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Preference number: 3 (lower is better) Translates to: KGGCGVYGPQGTPGQFWARLLES*LSAHTH Trigger: GTGTGTGTGCGCACTAAGCAAGCTCTCTAGCAACCG...TGCCCAGAACTGACCTGGAGTTCCTTGAGGCCCATACACCCCACACCCACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR GCA 72 bp | GTGTACGGAGGCCCAAGGGTCCTCTACATAAAGGCCTaGCTTGTCTCTACACAGGGCCTCATATCCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VYGGPRVLYIKA*LVSTQGLISLG Trigger: CCCCAAGGATATGAGGCCCTGTGTAGAGACAAGGCAGGCCTTTATGTAGAGGACCCTTGGGCCTCCGTACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 72 bp | GAGTTGAAGGCCCAGATCACTCCCTTGTCCCCTGGGTaGCTAGGAAAAACTGCCACATGCTGGTGTCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: ELKAQITPLSPG*LGKTATCWCLS Trigger: GCTCAGACACCAGCATGTGGCAGTTTTTCCTAGCCACCCAGGGGACAAGGGAGTGATCTGGGCCTTCAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 72 bp | GGGACATGTAGGTCCTGCCTGTCACCAGTAAAGAACTaGACAGCTAGGCCCATGTCACCCCCTAGGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GTCRSCLSPVKN*TARPMSPPRKQ Trigger: CTGCTTCCTAGGGGGTGACATGGGCCTAGCTGTCCAGTTCTTTACTGGTGACAGGCAGGACCTACATGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR CCA 72 bp | CTAAGCCCCGGGTTCAGTTCCCAGCACTGTCTAAACTaGGTGTGGAGGTACATACCTCAGTCCCAGCACACG | + |
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Preference number: 3 (lower is better) Translates to: LSPGFSSQHCLN*VWRYIPQSQHT Trigger: CGTGTGCTGGGACTGAGGTATGTACCTCCACACCCAGTTTAGACAGTGCTGGGAACTGAACCCGGGGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTGGGTGTGGGGTGTATGGGCCTCAAGGAACTCCAGGTCAGTTCTGGGCATTACCAGTCTGGAGCTaGCAGCACAGAGGGACAACA | + |
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Preference number: 3 (lower is better) Translates to: KGGCGVYGPQGTPGQFWALPVWS*QHRGTT Trigger: TGTTGTCCCTCTGTGCTGCAAGCTCCAGACTGGTAA...TGCCCAGAACTGACCTGGAGTTCCTTGAGGCCCATACACCCCACACCCACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CAA 90 bp | CTATACAAATCAAGTCTCACCAGGATAAGGAGACCAACACCCCCAGGCCTAGTGGCCCAGATCACTCCCTaGTCCCCTGGGTGGCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: LYKSSLTRIRRPTPPGLVAQITP*SPGWLG Trigger: TCCTAGCCACCCAGGGGACAAGGGAGTGATCTGGGC...CACTAGGCCTGGGGGTGTTGGTCTCCTTATCCTGGTGAGACTTGATTTGTATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| 3UTR-3UTR CAA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGAACTCCAGTTGTTGAGTaGGGCCCAGGGGAATCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GTGRQSNRASCYPRLLTGTPVVE*GPGESY Trigger: ATAGGATTCCCCTGGGCCCAACTCAACAACTGGAGT...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTGGGTGTGGGGTGTATGGGCCTCAAGGAACTCCAGGTCAGTTCTGGGCATTATTAATGAGCAGGTaGGGGGAGGGACATGCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: KGGCGVYGPQGTPGQFWALLMSR*GEGHAG Trigger: ACCGGCATGTCCCTCCCCCAACCTGCTCATTAATAA...TGCCCAGAACTGACCTGGAGTTCCTTGAGGCCCATACACCCCACACCCACCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | CACACTGGGGACATAGATTGGTCGGTAGAGGCTTGCTaGAGATGCTCTAAGCCCCGGGTTCAGTTCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HTGDIDWSVEAC*RCSKPRVQFPA Trigger: TGCTGGGAACTGAACCCGGGGCTTAGAGCATCTTCAGCAAGCCTCTACCGACCAATCTATGTCCCCAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | AATAGCGGGTCCAGGTCACTTAAGGGACATTGTCACTaGGGTGACAGGCAAGGCGCAGGCCCTGCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NSGSRSLKGHCH*GDRQGAGPAVS Trigger: AGAAACAGCAGGGCCTGCGCCTTGCCTGTCACCTCAGTGACAATGTCCCTTAAGTGACCTGGACCCGCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CCA 72 bp | ACCCCCTCAGGGACCTCACTAGTGTCATTACCAGTCTaGAGCTTGCAGCACAGAGGGACAACAGCTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPSGTSLVSLPV*SLQHRGTTAEK Trigger: CTTCTCAGCTGTTGTCCCTCTGTGCTGCAAGCTCCAGACTGGTAATGACACTAGTGAGGTCCCTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CCA 72 bp | TGGAGAGTTGAAGGCCCAGATCACTCCCTTGTCCCCTaGGTGGCTAGGAAAAACTGCCACATGCTGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WRVEGPDHSLVP*VARKNCHMLVS Trigger: AGACACCAGCATGTGGCAGTTTTTCCTAGCCACCCAGGGGACAAGGGAGTGATCTGGGCCTTCAACTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR GCA 72 bp | ACCCTCCTTATTAATGAGCAGGTTGGGGGAGGGACATaGCGGTCTCTCCAGCTTCCACCTCAGAGAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLINEQVGGGT*RSLQLPPQRKH Trigger: GTGTTTTCTCTGAGGTGGAAGCTGGAGAGACCGGCATGTCCCTCCCCCAACCTGCTCATTAATAAGGAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CCA 72 bp | TCCACTGGGCAAGTCCCCCATAGCAAGGTAGATATCTaGGCTTTGTCTTTCCAGCTTGGAGTCATGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: STGQVPHSKVDI*ALSFQLGVMPG Trigger: GCCAGGCATGACTCCAAGCTGGAAAGACAAAGCCCAGATATCTACCTTGCTATGGGGGACTTGCCCAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGAGTAGATATCTGGGCTTaGTCTTTCCAGCTTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GTGRQSNRASCYPRLLTGVDIWA*SFQLGV Trigger: GACTCCAAGCTGGAAAGACAAAGCCCAGATATCTAC...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | CGCCATCTTGGCTTTGCTGTATATTCCCTGAGGGATTaGGTGGCACTTTGGGTCCAGTTTCCCATAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RHLGFAVYSLRD*VALWVQFPIAP Trigger: TGGGGCTATGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAGCCAAGATGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | CCAAGAGCTAAGCCCAGGGGCCAACCAAGAACACTGTaGGATACCAAGCACGAGGTATACCCCTGTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PRAKPRGQPRTL*DTKHEVYPCNG Trigger: TCCATTACAGGGGTATACCTCGTGCTTGGTATCTCACAGTGTTCTTGGTTGGCCCCTGGGCTTAGCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR GCA 72 bp | GATCACTCCCTTGTCCCCTGGGTGGCTAGGAAAAACTaGCACATGCTGGTGTCTGAGCTGAGTTTCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DHSLVPWVARKN*HMLVSELSFKE Trigger: TTCCTTGAAACTCAGCTCAGACACCAGCATGTGGCAGTTTTTCCTAGCCACCCAGGGGACAAGGGAGTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR GCA 72 bp | CAATTGTTAAGGAAGGCAAGAACTGTCCCACCCCTGTaGATCCTTGGTCAAAGGGCAGCAAGGACAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLLRKARTVPPL*ILGQRAARTGR Trigger: CCTACCTGTCCTTGCTGCCCTTTGACCAAGGATGCACAGGGGTGGGACAGTTCTTGCCTTCCTTAACAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CCA 72 bp | ATGGAGGTGAGGAGGATCAGGAGTTCAAGGCCAGCTTaGGCCATGAGAGGGCTTATGTCAACAACAAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: MEVRRIRSSRPA*AMRGLMSTTKP Trigger: GGGTTTTGTTGTTGACATAAGCCCTCTCATGGCCCAAGCTGGCCTTGAACTCCTGATCCTCCTCACCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CCA 72 bp | TATCTGGGCTTTGTCTTTCCAGCTTGGAGTCATGCCTaGCCTCCGCTCACACTGGCAAATTCCCTGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YLGFVFPAWSHA*PPLTLANSLTF Trigger: AAAGGTCAGGGAATTTGCCAGTGTGAGCGGAGGCCAGGCATGACTCCAAGCTGGAAAGACAAAGCCCAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGCCAAGGGACATGTAGGTCCTGCCTGTCACCAGTAAAGAACTGGACAGCTTTAAAGTCCTATGGATaGGGCCTGGCTAGGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CGQGTCRSCLSPVKNWTALKSYG*GLARPF Trigger: AAAAGGCCTAGCCAGGCCCAATCCATAGGACTTTAA...AGCTGTCCAGTTCTTTACTGGTGACAGGCAGGACCTACATGTCCCTTGGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGGAAAAACTGCCACATGCTGGTGTCTGAGCTGAGTTTCAAGGAAAATGGAGAGTTCAAGGCCAGCTaGGGCCATGAGAGGGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ARKNCHMLVSELSFKENGEFKAS*GHERAY Trigger: ATAAGCCCTCTCATGGCCCAAGCTGGCCTTGAACTC...TCCATTTTCCTTGAAACTCAGCTCAGACACCAGCATGTGGCAGTTTTTCCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | AAACAAGACGCCATCTTGGCTTTGCTGTATATTCCCTaGGGGATTGAGTGGCACTTTGGGTCCAGTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KQDAILALLYIP*GIEWHFGSSFP Trigger: TGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAGCCAAGATGGCGTCTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CCA 72 bp | TTTATTGGACATTTGTGTTACAGAGGCACAGGTCTCTaGGCACCCATTCCTAGGACCAGAGTACAATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FIGHLCYRGTGL*APIPRTRVQWL Trigger: CAGCCATTGTACTCTGGTCCTAGGAATGGGTGCCCAGAGACCTGTGCCTCTGTAACACAAATGTCCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | TGGCTAGGAAAAACTGCCACATGCTGGTGTCTGAGCTaGGTTTCAAGGAAAATGGATTTACTGCGAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: WLGKTATCWCLS*VSRKMDLLRVN Trigger: GTTGACTCGCAGTAAATCCATTTTCCTTGAAACTCAGCTCAGACACCAGCATGTGGCAGTTTTTCCTAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR TCA 72 bp | CAGTTGTTGAGTTGGGCCCAGGGGAATCCTATAAAATaGGGAAACAAGACGCCATCTTGGCTTTGCTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: QLLSWAQGNPIK*GNKTPSWLCCI Trigger: TATACAGCAAAGCCAAGATGGCGTCTTGTTTCCTCATTTTATAGGATTCCCCTGGGCCCAACTCAACAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGTGGGTGTGGGGTGTATGGGCCTCAAGGAACTCCAGGTCAGTTCTGGGCATGGCGCAGGACCTGGTaGCTCCAGCCCCGGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KGGCGVYGPQGTPGQFWAWRRTW*LQPREA Trigger: CGCCTCCCGGGGCTGGAGGCACCAGGTCCTGCGCCA...TGCCCAGAACTGACCTGGAGTTCCTTGAGGCCCATACACCCCACACCCACCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCATAAAGGCTCTGCCTGGTCCCCACACCAGAGCCTAGGTGTCCCGGGCGAACACTGTTCTCCCTaGGGCCACCAGACCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLHKGSAWSPHQSLGVPGEHCSP*GHQTPV Trigger: GACAGGGGTCTGGTGGCCGCAGGGAGAACAGTGTTC...GCCCGGGACACCTAGGCTCTGGTGTGGGGACCAGGCAGAGCCTTTATGAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGGGACCTCACTAGTGTCATTACCAGTCTGGAGCTTGCAGCACAGAGGGGGGGCTGGTCCTCAGTaGCACCAAGCATGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGTSLVSLPVWSLQHRGGAGPQ*HQAWPQ Trigger: CTGGGGCCATGCTTGGTGTCACTGAGGACCAGCCCC...CCCTCTGTGCTGCAAGCTCCAGACTGGTAATGACACTAGTGAGGTCCCTGAGGG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCCTTCTGTGTCCTGCATaGGTGTTCGGCGCCGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIQKAACGGQRARRLRSRLLCPA*VFGAEG Trigger: CCCCTCGGCGCCGAACACCCATGCAGGACACAGAAG...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCATTAGGGCAGAGGTTTGGCTGGACAAAAGGAGCCCCGCTCTGGCCTTGGTCTGCTCTCCTGGGGTaGCTTCTGTGTCCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RALGQRFGWTKGAPLWPWSALLG*LLCPAW Trigger: CCATGCAGGACACAGAAGCCACCCCAGGAGAGCAGA...CCAAGGCCAGAGCGGGGCTCCTTTTGTCCAGCCAAACCTCTGCCCTAATGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAGCTTGCAGCACAGAGGGACAACAGCTGAGAAGAGCAGGCAGGCTCCTCCCCCTGAGCCTGACTaGGGTCTGTCAGGTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWSLQHRGTTAEKSRQAPPPEPD*GLSGVC Trigger: GCAGACACCTGACAGACCCCAGTCAGGCTCAGGGGG...AGGAGCCTGCCTGCTCTTCTCAGCTGTTGTCCCTCTGTGCTGCAAGCTCCAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTTCATAAAGGCTCTGCCTGGTCCCCACACCAGAGCCTAGGTGTCCCGGGCAGTTCTTGGCCAGCGTaGGGGTCTCGATCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLHKGSAWSPHQSLGVPGSSWPA*GSRSWR Trigger: TCTCCAAGATCGAGACCCTCACGCTGGCCAAGAACT...GCCCGGGACACCTAGGCTCTGGTGTGGGGACCAGGCAGAGCCTTTATGAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCATTAGGGCAGAGGTTTGGCTGGACAAAAGGAGCCCCGCTCTGGCCTTGGTGGCGGTCAGCGACTTaGTATAGTTCTTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RALGQRFGWTKGAPLWPWWRSAT*YSSWPA Trigger: CGCTGGCCAAGAACTATATCAAGTCGCTGACCGCCA...CCAAGGCCAGAGCGGGGCTCCTTTTGTCCAGCCAAACCTCTGCCCTAATGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CCA 90 bp | GGTATACAAAAGGCAGCTTGTGGGGGACAAAGAGCCAGGAGGCTGAGGTCCCGCAGGTGGCCTTGGGGCTaGTCCTCAGTGACACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIQKAACGGQRARRLRSRRWPWG*SSVTPS Trigger: GCTTGGTGTCACTGAGGACCAGCCCCAAGGCCACCT...GCGGGACCTCAGCCTCCTGGCTCTTTGTCCCCCACAAGCTGCCTTTTGTATACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGAGGATCAGGAGTTCAAGGCCAGCTTGGGCCATGAGAGGGCTTATGTCAGGTGTCTGCTCTCCTaGGGTGGCTTCTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEDQEFKASLGHERAYVRCLLS*GGFCVL Trigger: CAGGACACAGAAGCCACCCCAGGAGAGCAGACACCT...GACATAAGCCCTCTCATGGCCCAAGCTGGCCTTGAACTCCTGATCCTCCTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CAA 72 bp | GCTTTCCCTGGAGAGTTGAAGGCCCAGATCACTCCCTaGTCCCCTGGGTGGCTAGGAAAAACTGCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: AFPGELKAQITP*SPGWLGKTATC Trigger: GCATGTGGCAGTTTTTCCTAGCCACCCAGGGGACAAGGGAGTGATCTGGGCCTTCAACTCTCCAGGGAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CAA 72 bp | GGGCAAGTCCCCCATAGCAAGGTAGATATCTGGGCTTaGTCTTTCCAGCTTGGAGTCATGCCTGGCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GQVPHSKVDIWA*SFQLGVMPGLR Trigger: GCGGAGGCCAGGCATGACTCCAAGCTGGAAAGACAAAGCCCAGATATCTACCTTGCTATGGGGGACTTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR TCA 90 bp | GGGACAGGGAGACAGAGCAATAGGGCTTCCTGCTATCCCAGACTCCTAACGGGACCTGGAAGGCATTGTTaGGTTTATGCATCCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGRQSNRASCYPRLLTGPGRHC*VYASAA Trigger: GGCAGCGGATGCATAAACTCAACAATGCCTTCCAGG...TCCCGTTAGGAGTCTGGGATAGCAGGAAGCCCTATTGCTCTGTCTCCCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGGGGCCAACCAAGAACACTGTGAGATACCAAGCACGAGGTATACCCCTGATGACCTCGCGCAGTaGCTGGAAGGCATTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGANQEHCEIPSTRYTPDDLAQ*LEGIVE Trigger: CTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATC...AGGGGTATACCTCGTGCTTGGTATCTCACAGTGTTCTTGGTTGGCCCCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR GCA 90 bp | CTATACAAATCAAGTCTCACCAGGATAAGGAGACCAACACCCCCAGGCCTAGTGATGGCCCCAGCTACCTaGTGCTGCTGCTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYKSSLTRIRRPTPPGLVMAPAT*CCCCCC Trigger: GCAACAGCAGCAGCAGCAGCAGGTAGCTGGGGCCAT...CACTAGGCCTGGGGGTGTTGGTCTCCTTATCCTGGTGAGACTTGATTTGTATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CAA 72 bp | TCAGGGACCTCACTAGTGTCATTACCAGTCTGGAGCTaGCAGCACAGAGGGACAACAGCTGAGAAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTSLVSLPVWS*QHRGTTAEKSR Trigger: CCTGCTCTTCTCAGCTGTTGTCCCTCTGTGCTGCAAGCTCCAGACTGGTAATGACACTAGTGAGGTCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGGAAAAACTGCCACATGCTGGTGTCTGAGCTGAGTTTCAAGGAAAATGGAGCCCCAGCTACCTGCTaGTGCTGCTGCTGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARKNCHMLVSELSFKENGAPATC*CCCCCC Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGTAGCTGGGGC...TCCATTTTCCTTGAAACTCAGCTCAGACACCAGCATGTGGCAGTTTTTCCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CAA 72 bp | GATGGAGGTGAGGAGGATCAGGAGTTCAAGGCCAGCTaGGGCCATGAGAGGGCTTATGTCAACAACAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: DGGEEDQEFKAS*GHERAYVNNKT Trigger: GGTTTTGTTGTTGACATAAGCCCTCTCATGGCCCAAGCTGGCCTTGAACTCCTGATCCTCCTCACCTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CAA 72 bp | ACGCCATCTTGGCTTTGCTGTATATTCCCTGAGGGATaGAGTGGCACTTTGGGTCCAGTTTCCCATAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPSWLCCIFPEG*SGTLGPVSHSP Trigger: GGGGCTATGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAGCCAAGATGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| 3UTR CAA 72 bp | CTTTGCTGTATATTCCCTGAGGGATTGAGTGGCACTTaGGGTCCAGTTTCCCATAGCCCCACAATATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCIFPEGLSGT*GPVSHSPTIFR Trigger: CCTAAATATTGTGGGGCTATGGGAAACTGGACCCAAAGTGCCACTCAATCCCTCAGGGAATATACAGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS TCA 90 bp | TTATGCATCCGCTGCCTCTCTCGCTCATTGCTCTCCAGCCGCCTCTaGACACTGTTCTCCCTGCGGCCACCAGACCCCTGTCGCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCIRCLSRSLLSSRL*TLFSLRPPDPCRRR Trigger: CCGCCGGCGACAGGGGTCTGGTGGCCGCAGGGAGAACAGTGTTCAGAGGCGGCTGGAGAGCAATGAGCGAGAGAGGCAGCGGATGCATAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS GCA 90 bp | GGAGAGCTTCTTGTCAGCCCGCACGTGCGGGATGACCTCGCGCAGTaGCTGGAAGGCATTGTTGAGTTTATGCATCCGCTGCCTCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GELLVSPHVRDDLAQ*LEGIVEFMHPLPLS Trigger: CGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCACGTGCGGGCTGACAAGAAGCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS CCA 90 bp | AGCTTCTTGTCAGCCCGCACGTGCGGGATGACCTCGCGCAGTGCCTaGAAGGCATTGTTGAGTTTATGCATCCGCTGCCTCTCTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLSARTCGMTSRSA*KALLSLCIRCLSRS Trigger: TGAGCGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCACGTGCGGGCTGACAAGAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGGGGCCAACCAAGAACACTGTGAGATACCAAGCACGAGGTATACCCCTATCTTGGAGAGCTTCTaGTCAGCCCGCACGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGANQEHCEIPSTRYTPILESF*SARTCG Trigger: CCCGCACGTGCGGGCTGACAAGAAGCTCTCCAAGAT...AGGGGTATACCTCGTGCTTGGTATCTCACAGTGTTCTTGGTTGGCCCCTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGGACCTCACTAGTGTCATTACCAGTCTGGAGCTTGCAGCACAGAGGGGCCTGGAAGGCATTGTaGAGTTTATGCATCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGTSLVSLPVWSLQHRGAWKAL*SLCIRC Trigger: GCAGCGGATGCATAAACTCAACAATGCCTTCCAGGC...CCCTCTGTGCTGCAAGCTCCAGACTGGTAATGACACTAGTGAGGTCCCTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CAA 90 bp | CTATACAAATCAAGTCTCACCAGGATAAGGAGACCAACACCCCCAGGCCTAGTGCTGTGTAGAGTAGCGTaGCAGGTGGCCTTGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LYKSSLTRIRRPTPPGLVLCRVA*QVALGL Trigger: CAGCCCCAAGGCCACCTGCAACGCTACTCTACACAG...CACTAGGCCTGGGGGTGTTGGTCTCCTTATCCTGGTGAGACTTGATTTGTATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS-3UTR CAA 90 bp | CTATACAAATCAAGTCTCACCAGGATAAGGAGACCAACACCCCCAGGCCTAGTGAGTGCCTGGAAGGCATaGTTGAGTTTATGCATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LYKSSLTRIRRPTPPGLVSAWKA*LSLCIR Trigger: GCGGATGCATAAACTCAACAATGCCTTCCAGGCACT...CACTAGGCCTGGGGGTGTTGGTCTCCTTATCCTGGTGAGACTTGATTTGTATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
||
| CDS GCA 72 bp | CTGTCGCCGGCGGCTGACCTCTCCCCGACCTCCGCTTaGACGCGCTGTCCTGCTCCGGAGACCCTTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LSPAADLSPTSA*TRCPAPETLCQ Trigger: CTGACAAAGGGTCTCCGGAGCAGGACAGCGCGTGCAAGCGGAGGTCGGGGAGAGGTCAGCCGCCGGCGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS TCA 72 bp | CGCTGCCTCTCTCGCTCATTGCTCTCCAGCCGCCTCTaGACACTGTTCTCCCTGCGGCCACCAGACCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RCLSRSLLSSRL*TLFSLRPPDPC Trigger: ACAGGGGTCTGGTGGCCGCAGGGAGAACAGTGTTCAGAGGCGGCTGGAGAGCAATGAGCGAGAGAGGCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS CAA 90 bp | GCCCGCACGTGCGGGATGACCTCGCGCAGTGCCTGGAAGGCATTGTaGAGTTTATGCATCCGCTGCCTCTCTCGCTCATTGCTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARTCGMTSRSAWKAL*SLCIRCLSRSLLSS Trigger: GCTGGAGAGCAATGAGCGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCACGTGCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS CCA 72 bp | TCAGCCCGCACGTGCGGGATGACCTCGCGCAGTGCCTaGAAGGCATTGTTGAGTTTATGCATCCGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SARTCGMTSRSA*KALLSLCIRCL Trigger: GAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCACGTGCGGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS CAA 90 bp | TCAGCCCGCACGTGCGGGATGACCTCGCGCAGTGCCTGGAAGGCATaGTTGAGTTTATGCATCCGCTGCCTCTCTCGCTCATTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SARTCGMTSRSAWKA*LSLCIRCLSRSLLS Trigger: GGAGAGCAATGAGCGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCACGTGCGGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS CAA 72 bp | CCCCTCTCTGAAGCTGTGGATCTGTGTAGAGTAGCGTaGCAGGTGGCCTTGGGGCTGGTCCTCAGTGACACC | + |
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Preference number: 6 (lower is better) Translates to: PLSEAVDLCRVA*QVALGLVLSDT Trigger: GGTGTCACTGAGGACCAGCCCCAAGGCCACCTGCAACGCTACTCTACACAGATCCACAGCTTCAGAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS CAA 72 bp | ACGTGCGGGATGACCTCGCGCAGTGCCTGGAAGGCATaGTTGAGTTTATGCATCCGCTGCCTCTCTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TCGMTSRSAWKA*LSLCIRCLSRS Trigger: TGAGCGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS GCA 72 bp | ACCTCGCGCAGTGCCTGGAAGGCATTGTTGAGTTTATaGATCCGCTGCCTCTCTCGCTCATTGCTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSRSAWKALLSL*IRCLSRSLLSS Trigger: GCTGGAGAGCAATGAGCGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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| CDS CAA 72 bp | TGCGGGATGACCTCGCGCAGTGCCTGGAAGGCATTGTaGAGTTTATGCATCCGCTGCCTCTCTCGCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: CGMTSRSAWKAL*SLCIRCLSRSL Trigger: CAATGAGCGAGAGAGGCAGCGGATGCATAAACTCAACAATGCCTTCCAGGCACTGCGCGAGGTCATCCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060747.8 |
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