Pregenerated sensors for BGN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031375Ensembl transcript IDs: ENSMUST00000033741.15, ENSMUST00000169489.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGGGGCCAATGCAAACTGGTTCTGGCGGCTCTGATGGCCTGCTaGGCCTCTCCAGGGGCTAGGAAGCTCCTTGATCCTCGTCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: SRGQCKLVLAALMAC*ASPGARKLLDPRLD Trigger: ATCAAGACGAGGATCAAGGAGCTTCCTAGCCCCTGGAGAGGCTCAGCAGGCCATCAGAGCCGCCAGAACCAGTTTGCATTGGCCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 90 bp | AGACATGAGCAAGGAAGAGGAGGAACACATGCCTGGATGGAACAATaGCGGTGGCAGTGTGCTCTATCCATCTTTCCTAGCCCCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: RHEQGRGGTHAWMEQ*RWQCALSIFPSPSC Trigger: GCAAGAGGGGCTAGGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTTCCTCCTCTTCCTTGCTCATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR TCA 90 bp | ATAGTTGCCCCATATTTGTTTGTGGAGGGACTGGCTAGAGACCTGTaGAGCAGAAAGCAGCCTGGGGCAGATGATCCGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: IVAPYLFVEGLARDL*SRKQPGADDPCVCV Trigger: CACACACACACACGGATCATCTGCCCCAGGCTGCTTTCTGCTTCACAGGTCTCTAGCCAGTCCCTCCACAAACAAATATGGGGCAACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 90 bp | GAGCAAGGAAGAGGAGGAACACATGCCTGGATGGAACAATGGCGGTaGCAGTGTGCTCTATCCATCTTTCCTAGCCCCTCTTGCCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: EQGRGGTHAWMEQWR*QCALSIFPSPSCQK Trigger: TTTTTGGCAAGAGGGGCTAGGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTTCCTCCTCTTCCTTGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 90 bp | TGGAAGTCAGACATGAGCAAGGAAGAGGAGGAACACATGCCTGGATaGAACAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: WKSDMSKEEEEHMPG*NNGGGSVLYPSFLA Trigger: GGCTAGGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTTCCTCCTCTTCCTTGCTCATGTCTGACTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 90 bp | GAGCTGGAAGTCAGACATGAGCAAGGAAGAGGAGGAACACATGCCTaGATGGAACAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: ELEVRHEQGRGGTHA*MEQWRWQCALSIFP Trigger: AGGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTTCCTCCTCTTCCTTGCTCATGTCTGACTTCCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 90 bp | CACCTCCTACCACATCAGGGACCCAGGGGTGAGGGAGTCTCTGAGTaGACATGGTTGATGAATGTTAAATTTCAAAGGTTGAGGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: HLLPHQGPRGEGVSE*TWLMNVKFQRLRGM Trigger: CATTCCCCTCAACCTTTGAAATTTAACATTCATCAACCATGTCCACTCAGAGACTCCCTCACCCCTGGGTCCCTGATGTGGTAGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169489.2 |
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| 3UTR CCA 90 bp | GCCATGTGCATATATGCATGCTTAGGAGTCAGGGGGAAGCTGTGGTaGGGCAGTGAGTTAATATTGGGGAACAAAGGTGTTGCTTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: AMCIYACLGVRGKLW*GSELILGNKGVASS Trigger: TGAAGAAGCAACACCTTTGTTCCCCAATATTAACTCACTGCCCCACCACAGCTTCCCCCTGACTCCTAAGCATGCATATATGCACATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR TCA 90 bp | GAGGGAAAGATCCAGGAGTTAGTACAGCCAGGTTGTAGCTGGGATTaGCAGGTAGTGAACTTGTTGAAGAGAGAACACCAGAGGATAAGG | + |
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Preference number: 1 (lower is better) Translates to: EGKIQELVQPGCSWD*QVVNLLKREHQRIR Trigger: CCTTATCCTCTGGTGTTCTCTCTTCAACAAGTTCACTACCTGTCAATCCCAGCTACAACCTGGCTGTACTAACTCCTGGATCTTTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR GCA 90 bp | CAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCTAGCCCCTCTTaGCAAAAACATCTGAGTTTCAGGATGAGCAAGAAGAAAGATTTA | + |
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Preference number: 1 (lower is better) Translates to: QWRWQCALSIFPSPS*QKHLSFRMSKKKDL Trigger: TAAATCTTTCTTCTTGCTCATCCTGAAACTCAGATGTTTTTGGCAAGAGGGGCTAGGAAAGATGGATAGAGCACACTGCCACCGCCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR-3UTR TCA 90 bp | CATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATGTTGAGGGGAATGGGTaGGAGGGCCAGGCCATGTGC | + |
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Preference number: 2 (lower is better) Translates to: HKQHSLLLGATDHHLLPHVEGNG*EGQAMC Trigger: GCACATGGCCTGGCCCTCTCACCCATTCCCCTCAAC...ATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGATGGAAGGGGACAGGTCAATAACTCCAGAAGGAAGAAAAGTGTCAGGAAGGCTGGAAGTCAGACATaGGCAAGGAAGAGGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RDGRGQVNNSRRKKSVRKAGSQT*ARKRRN Trigger: GTTCCTCCTCTTCCTTGCTCATGTCTGACTTCCAGC...CTTCCTGACACTTTTCTTCCTTCTGGAGTTATTGACCTGTCCCCTTCCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATCTGTTGCTTCTTCATCTaGCTATGTTCCTCAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: ISSTPSCWVQLTITSYHICCFFI*LCSSET Trigger: AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACA...GATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGTGTCAGGAAGCATAACAGGGTTGGAGAGAGGGAAAGATCCAGGAGTTAGAGCCCAGGAGAGCTaGAAGTCAGACATGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RKVSGSITGLERGKDPGVRAQES*KSDMSK Trigger: CTTGCTCATGTCTGACTTCCAGCTCTCCTGGGCTCT...AACTCCTGGATCTTTCCCTCTCTCCAACCCTGTTATGCTTCCTGACACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAGTGTCAGGAAGCATAACAGGGTTGGAGAGAGGGAAAGATCCAGGAGTTGAGGGCCAGGCCATGTaGATATATGCATGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKVSGSITGLERGKDPGVEGQAM*IYACLG Trigger: TCCTAAGCATGCATATATGCACATGGCCTGGCCCTC...AACTCCTGGATCTTTCCCTCTCTCCAACCCTGTTATGCTTCCTGACACTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR-3UTR CCA 90 bp | ACATGGTTGATGAATGTTAAATTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCGTCAGGGGGAAGCTGTaGTGGGGCAGTGAGTTAATA | + |
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Preference number: 2 (lower is better) Translates to: TWLMNVKFQRLRGMGERAVRGKL*WGSELI Trigger: TATTAACTCACTGCCCCACCACAGCTTCCCCCTGAC...GGCCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAACATTCATCAACCATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGGTTGATGAATGTTAAATTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCTGTTGCTTCTTCATCTaGCTATGTTCCTCAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: TWLMNVKFQRLRGMGERACCFFI*LCSSET Trigger: AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACA...GGCCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAACATTCATCAACCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTGAGTGGACATGGTTGATGAATGTTAAATTTCAAAGGTTGAGGGGAATGATGTGCATATATGCATaGTTAGGAGTCAGGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VSEWTWLMNVKFQRLRGMMCIYA*LGVRGK Trigger: CTTCCCCCTGACTCCTAAGCATGCATATATGCACAT...CATTCCCCTCAACCTTTGAAATTTAACATTCATCAACCATGTCCACTCAGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTCAAGTTCTGGGTAGGGCAATCAGGAAGATAGTTGCCCCATATTTGTTTGTCTCTGAGTGGACATaGTTGATGAATGTTAAATTT | + |
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Preference number: 2 (lower is better) Translates to: GGQVLGRAIRKIVAPYLFVSEWT*LMNVKF Trigger: AAATTTAACATTCATCAACCATGTCCACTCAGAGAC...AAACAAATATGGGGCAACTATCTTCCTGATTGCCCTACCCAGAACTTGACCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR-3UTR TCA 90 bp | CTCTTGCCAAAAACATCTGAGTTTCAGGATGAGCAAGAAGAAAGATTTATAGGGTTAAATTTCAAAGGTTaGGGGGAATGGGTGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLPKTSEFQDEQEERFIGLNFKG*GEWVRG Trigger: CCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAA...CCCTATAAATCTTTCTTCTTGCTCATCCTGAAACTCAGATGTTTTTGGCAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR TCA 72 bp | AGAGCAGGGGCCAATGCAAACTGGTTCTGGCGGCTCTaGTGGCCTGCTGAGCCTCTCCAGGGGCTAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: RAGANANWFWRL*WPAEPLQGLGS Trigger: GCTTCCTAGCCCCTGGAGAGGCTCAGCAGGCCATCAGAGCCGCCAGAACCAGTTTGCATTGGCCCCTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR TCA 72 bp | CAATGCAAACTGGTTCTGGCGGCTCTGATGGCCTGCTaGGCCTCTCCAGGGGCTAGGAAGCTCCTTGATCCT | + |
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Preference number: 3 (lower is better) Translates to: QCKLVLAALMAC*ASPGARKLLDP Trigger: AGGATCAAGGAGCTTCCTAGCCCCTGGAGAGGCTCAGCAGGCCATCAGAGCCGCCAGAACCAGTTTGCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 72 bp | AGAGGAGGAACACATGCCTGGATGGAACAATGGCGGTaGCAGTGTGCTCTATCCATCTTTCCTAGCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RGGTHAWMEQWR*QCALSIFPSPS Trigger: AGAGGGGCTAGGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTTCCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 72 bp | GAGACAACTGACCTCATAAGCAGCACTCCCTCTTGCTaGGTGCAACTGACCATCACCTCCTACCACATCAGG | + |
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Preference number: 3 (lower is better) Translates to: ETTDLISSTPSC*VQLTITSYHIR Trigger: CCTGATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATGAGGTCAGTTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR CCA 72 bp | GACATGAGCAAGGAAGAGGAGGAACACATGCCTGGATaGAACAATGGCGGTGGCAGTGTGCTCTATCCATCT | + |
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Preference number: 3 (lower is better) Translates to: DMSKEEEEHMPG*NNGGGSVLYPS Trigger: AGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTTCCTCCTCTTCCTTGCTCATGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR-3UTR CAA 90 bp | CATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATTGGGGAACAAAGGTGTaGCTTCTTCATCTGGCTATG | + |
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Preference number: 3 (lower is better) Translates to: HKQHSLLLGATDHHLLPHWGTKV*LLHLAM Trigger: CATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCA...ATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR CCA 72 bp | CCACATCAGGGACCCAGGGGTGAGGGAGTCTCTGAGTaGACATGGTTGATGAATGTTAAATTTCAAAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PHQGPRGEGVSE*TWLMNVKFQRL Trigger: CAACCTTTGAAATTTAACATTCATCAACCATGTCCACTCAGAGACTCCCTCACCCCTGGGTCCCTGATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169489.2 |
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| 3UTR TCA 72 bp | ATCCAGGAGTTAGTACAGCCAGGTTGTAGCTGGGATTaGCAGGTAGTGAACTTGTTGAAGAGAGAACACCAG | + |
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Preference number: 3 (lower is better) Translates to: IQELVQPGCSWD*QVVNLLKREHQ Trigger: CTGGTGTTCTCTCTTCAACAAGTTCACTACCTGTCAATCCCAGCTACAACCTGGCTGTACTAACTCCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR TCA 72 bp | AGGAAGCTCCTTGATCCTCGTCTTGATAGCAGAGTATaGACCCTTTCCTGGACAAAATGGACAGGATTCTGG | + |
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Preference number: 3 (lower is better) Translates to: RKLLDPRLDSRV*TLSWTKWTGFW Trigger: CCAGAATCCTGTCCATTTTGTCCAGGAAAGGGTTCATACTCTGCTATCAAGACGAGGATCAAGGAGCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR GCA 72 bp | TGGCAGTGTGCTCTATCCATCTTTCCTAGCCCCTCTTaGCAAAAACATCTGAGTTTCAGGATGAGCAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: WQCALSIFPSPS*QKHLSFRMSKK Trigger: CTTCTTGCTCATCCTGAAACTCAGATGTTTTTGGCAAGAGGGGCTAGGAAAGATGGATAGAGCACACTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| 3UTR CCA 72 bp | GTTAATATTGGGGAACAAAGGTGTTGCTTCTTCATCTaGCTATGTTCCTCAGAGACTCTCACCAAGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: VNIGEQRCCFFI*LCSSETLTKAT Trigger: GGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR CCA 72 bp | ATATATGCATGCTTAGGAGTCAGGGGGAAGCTGTGGTaGGGCAGTGAGTTAATATTGGGGAACAAAGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: IYACLGVRGKLW*GSELILGNKGV Trigger: AACACCTTTGTTCCCCAATATTAACTCACTGCCCCACCACAGCTTCCCCCTGACTCCTAAGCATGCATATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CCA 90 bp | CTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGGCAACGAGGAGCTTGAGATCTaGGAGGCCAGCAGGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: LHLAMFLRDSHQGHHGGNEELEI*EASRHP Trigger: CGGGTGCCTGCTGGCCTCCCAGATCTCAAGCTCCTC...GTTGCCACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR TCA 90 bp | CTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGGCAACCCCAAGTCAGAGCACTaGACAACCCGCAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHLAMFLRDSHQGHHGGNPKSEH*TTRRWQ Trigger: CTGCCACCTGCGGGTTGTTCAGTGCTCTGACTTGGG...GTTGCCACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CCA 90 bp | ATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATCTCAAAGGGCAAGGCCTaGCTCAGGGCCAGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ISSTPSCWVQLTITSYHISKGKA*LRASSK Trigger: CTTGCTGCTGGCCCTGAGCCAGGCCTTGCCCTTTGA...GATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGGCAGATGATCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCCGCAGGTGGCAGTaGCAACCGAAAGGACACATG | + |
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Preference number: 4 (lower is better) Translates to: PGADDPCVCVCVCVCVCVTRRWQ*QPKGHM Trigger: CATGTGTCCTTTCGGTTGCCACTGCCACCTGCGGGT...CACACACACACACACACACACACACACACACACACACGGATCATCTGCCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| CDS-3UTR GCA 90 bp | GACCTCATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCGCCCTTGGGCACTTTaGGGATACGGTTGTCATGGA | + |
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Preference number: 4 (lower is better) Translates to: DLISSTPSCWVQLTITSYRPWAL*GYGCHG Trigger: TCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCG...GTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CCA 90 bp | TGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGTCAAAGGGCAAGGCCTaGCTCAGGGCCAGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: CFFIWLCSSETLTKATMVSKGKA*LRASSK Trigger: CTTGCTGCTGGCCCTGAGCCAGGCCTTGCCCTTTGA...CACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CCA 90 bp | CTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGGCAACACCCGCAGGTGGCAGTaGCAACCGAAAGGACACATG | + |
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Preference number: 4 (lower is better) Translates to: LHLAMFLRDSHQGHHGGNTRRWQ*QPKGHM Trigger: CATGTGTCCTTTCGGTTGCCACTGCCACCTGCGGGT...GTTGCCACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR TCA 90 bp | CTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGGCAACCAGTGTGGTGTCAGGTaGGATCTCCTTGGGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: LHLAMFLRDSHQGHHGGNQCGVR*DLLGHS Trigger: ACTGTGCCCAAGGAGATCTCACCTGACACCACACTG...GTTGCCACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR TCA 90 bp | GACCTCATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACAGTGAGCTTGGCCTCTaGGATGCGCAGGTAATTGAG | + |
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Preference number: 4 (lower is better) Translates to: DLISSTPSCWVQLTITSYSELGL*DAQVIE Trigger: CTCAATTACCTGCGCATCTCAGAGGCCAAGCTCACT...GTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CCA 90 bp | TTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGGGAGCTGGGCAGGTTaGGAGGAATCTCCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLLHLAMFLRDSHQGHHGGSWAG*EESPPG Trigger: ACCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCC...ACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| 3UTR CAA 72 bp | TGGCCTGCTGAGCCTCTCCAGGGGCTAGGAAGCTCCTaGATCCTCGTCTTGATAGCAGAGTATGAACCCTTT | + |
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Preference number: 4 (lower is better) Translates to: WPAEPLQGLGSS*ILVLIAEYEPF Trigger: AAAGGGTTCATACTCTGCTATCAAGACGAGGATCAAGGAGCTTCCTAGCCCCTGGAGAGGCTCAGCAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| CDS-3UTR TCA 90 bp | ACATGGTTGATGAATGTTAAATTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCTGTTCCGGAGCCCGCTaGACACGCCCTTGGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: TWLMNVKFQRLRGMGERACSGAR*TRPWAL Trigger: AAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACA...GGCCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAACATTCATCAACCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR TCA 90 bp | TGGGGCAGTGAGTTAATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATTGTTCCGGAGCCCGCTaGACACGCCCTTGGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: WGSELILGNKGVASSSGYCSGAR*TRPWAL Trigger: AAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACA...ATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATTAACTCACTGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR TCA 90 bp | CATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATAGATGCGCAGGTAATTaGGCTTCAGGCCATCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HKQHSLLLGATDHHLLPHRCAGN*ASGHQR Trigger: CCTTTGATGGCCTGAAGCTCAATTACCTGCGCATCT...ATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR TCA 90 bp | TTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTAGTGAGCTTGGCCTCTaGGATGCGCAGGTAATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLHLAMFLRDSHQGHHGSELGL*DAQVIE Trigger: CTCAATTACCTGCGCATCTCAGAGGCCAAGCTCACT...ACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCCTAGCCCCTCTTGCCAAAAACATCTGAGTTTCAGGATGAGCAAGAAGGGGAGCTGGGCAGGTTaGGAGGAATCTCCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPSPSCQKHLSFRMSKKGSWAG*EESPPG Trigger: ACCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCC...CTTCTTGCTCATCCTGAAACTCAGATGTTTTTGGCAAGAGGGGCTAGGAAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR TCA 90 bp | AATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCCCAAGTCAGAGCACTaGACAACCCGCAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NIGEQRCCFFIWLCSSETPKSEH*TTRRWQ Trigger: CTGCCACCTGCGGGTTGTTCAGTGCTCTGACTTGGG...AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTGTCAGGAAGCATAACAGGGTTGGAGAGAGGGAAAGATCCAGGAGTTCAGTGTGGTGTCAGGTaGGATCTCCTTGGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKVSGSITGLERGKDPGVQCGVR*DLLGHS Trigger: ACTGTGCCCAAGGAGATCTCACCTGACACCACACTG...AACTCCTGGATCTTTCCCTCTCTCCAACCCTGTTATGCTTCCTGACACTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR TCA 90 bp | AGAGATGGAAGGGGACAGGTCAATAACTCCAGAAGGAAGAAAAGTGTCAGGAAGGGTGCTGGAGGCCTTTaGAGTCATCCTTGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDGRGQVNNSRRKKSVRKGAGGL*SHPCEA Trigger: AGCTTCGCAAGGATGACTTCAAAGGCCTCCAGCACC...CTTCCTGACACTTTTCTTCCTTCTGGAGTTATTGACCTGTCCCCTTCCATCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR TCA 90 bp | TTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTAGATGCGCAGGTAATTaGGCTTCAGGCCATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLHLAMFLRDSHQGHHGRCAGN*ASGHQR Trigger: CCTTTGATGGCCTGAAGCTCAATTACCTGCGCATCT...ACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCTTTGGGGATGCCAGTaGGCTTGGCCTCTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YWGTKVLLLHLAMFLRDSLWGCQ*AWPLRC Trigger: GCATCTCAGAGGCCAAGCTCACTGGCATCCCCAAAG...AGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGGTGGGGCAGTGAGTTAATATTGGGGAACAAAGGTGTTGCTTCTTCATCTCGCCCTTGGGCACTTTaGGGATACGGTTGTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWWGSELILGNKGVASSSRPWAL*GYGCHG Trigger: TCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCG...AGATGAAGAAGCAACACCTTTGTTCCCCAATATTAACTCACTGCCCCACCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | CTGACCATCACCTCCTACCACATCAGGGACCCAGGGGTGAGGGAGTCTCTGAGTCCTTCTCATGGATCTTaGAGATCTTATTGTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTITSYHIRDPGVRESLSPSHGS*RSYCLP Trigger: TGGTAAACAATAAGATCTCCAAGATCCATGAGAAGG...ACTCAGAGACTCCCTCACCCCTGGGTCCCTGATGTGGTAGGAGGTGATGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | AACACATGCCTGGATGGAACAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCCCAACCTGTACAGCTTaGAGTATCGAAGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTCLDGTMAVAVCSIHLSPTCTA*SIEVGP Trigger: AGGACCTACTTCGATACTCCAAGCTGTACAGGTTGG...GGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTGTCAGGAAGCATAACAGGGTTGGAGAGAGGGAAAGATCCAGGAGTTGCAGGTCTAGCAGTGTaGTGTCAGGTGAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKVSGSITGLERGKDPGVAGLAV*CQVRSP Trigger: AGGAGATCTCACCTGACACCACACTGCTAGACCTGC...AACTCCTGGATCTTTCCCTCTCTCCAACCCTGTTATGCTTCCTGACACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | AACACATGCCTGGATGGAACAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCTCCAACTCAATAGCCTaGATTTTGTTGTGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTCLDGTMAVAVCSIHLSSNSIA*ILLWSR Trigger: CCTGGACCACAACAAAATCCAGGCTATTGAGTTGGA...GGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCAAAAACATCTGAGTTTCAGGATGAGCAAGAAGAAAGATTTATAGGGGAGGAGCTTGAGATCTaGGAGGCCAGCAGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPKTSEFQDEQEERFIGEELEI*EASRHP Trigger: CGGGTGCCTGCTGGCCTCCCAGATCTCAAGCTCCTC...CCCTATAAATCTTTCTTCTTGCTCATCCTGAAACTCAGATGTTTTTGGCAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| 3UTR CAA 72 bp | CCAGAAGGAAGAAAAGTGTCAGGAAGCATAACAGGGTaGGAGAGAGGGAAAGATCCAGGAGTTAGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEGRKVSGSITG*ERGKDPGVSTA Trigger: GGCTGTACTAACTCCTGGATCTTTCCCTCTCTCCAACCCTGTTATGCTTCCTGACACTTTTCTTCCTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATATGCATCCACCAGGTGGTTCTTaGAGATGTAGAGTTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQRLRGMGERARPCAYMHPPGGS*RCRVFA Trigger: TGCAAAAACTCTACATCTCCAAGAACCACCTGGTGG...ATGCATATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGTTCTGGGTAGGGCAATCAGGAAGATAGTTGCCCCATATTTGTTTGTGGCCATCAAAGGCTCCTaGTTCAAAGCCACTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQVLGRAIRKIVAPYLFVAIKGS*FKATVL Trigger: GAGAACAGTGGCTTTGAACCAGGAGCCTTTGATGGC...CACAAACAAATATGGGGCAACTATCTTCCTGATTGCCCTACCCAGAACTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATATGCATTCCAACTCAATAGCCTaGATTTTGTTGTGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQRLRGMGERARPCAYMHSNSIA*ILLWSR Trigger: CCTGGACCACAACAAAATCCAGGCTATTGAGTTGGA...ATGCATATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTGCCAAAAACATCTGAGTTTCAGGATGAGCAAGAAGAAAGATTTATAGGGCTTTGGGGATGCCAGTaGGCTTGGCCTCTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPKTSEFQDEQEERFIGLWGCQ*AWPLRC Trigger: GCATCTCAGAGGCCAAGCTCACTGGCATCCCCAAAG...CCCTATAAATCTTTCTTCTTGCTCATCCTGAAACTCAGATGTTTTTGGCAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | GGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCACCACCAGGTGGTTCTTaGAGATGTAGAGTTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNKGVASSSGYVPQRLSPPPGGS*RCRVFA Trigger: TGCAAAAACTCTACATCTCCAAGAACCACCTGGTGG...TGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | AACACATGCCTGGATGGAACAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCCCTTCTCATGGATCTTaGAGATCTTATTGTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: NTCLDGTMAVAVCSIHLSPSHGS*RSYCLP Trigger: TGGTAAACAATAAGATCTCCAAGATCCATGAGAAGG...GGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGCATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATATGCATCTAAAGGCCTTCTCATaGATCTTGGAGATCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FQRLRGMGERARPCAYMHLKAFS*ILEILL Trigger: CAATAAGATCTCCAAGATCCATGAGAAGGCCTTTAG...ATGCATATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | AATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTGCCATCAAAGGCTCCTaGTTCAAAGCCACTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NIGEQRCCFFIWLCSSETAIKGS*FKATVL Trigger: GAGAACAGTGGCTTTGAACCAGGAGCCTTTGATGGC...AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGTTGATGAATGTTAAATTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCCCAACCTGTACAGCTTaGAGTATCGAAGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWLMNVKFQRLRGMGERAPTCTA*SIEVGP Trigger: AGGACCTACTTCGATACTCCAAGCTGTACAGGTTGG...GGCCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAACATTCATCAACCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCCGCTGAACACGCCCTaGGGCACTTTGCGGATACGG | + |
|
Preference number: 5 (lower is better) Translates to: DLISSTPSCWVQLTITSYPLNTP*GTLRIR Trigger: CCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGG...GTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATGAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS TCA 90 bp | GGGGATTCCCGCCCATCTCAATGCAGTTCATGTTCCGGAGCCCGCTaGACACGCCCTTGGGCACTTTGCGGATACGGTTGTCATGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GDSRPSQCSSCSGAR*TRPWALCGYGCHGF Trigger: GAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACATGAACTGCATTGAGATGGGCGGGAATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS CCA 90 bp | AGCCCGCTGAACACGCCCTTGGGCACTTTGCGGATACGGTTGTCATaGATTCGTAGTTCTACCAGGGAGCTGGGCAGGTTGGGAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: SPLNTPLGTLRIRLS*IRSSTRELGRLGGI Trigger: GATTCCTCCCAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | CTGACCATCACCTCCTACCACATCAGGGACCCAGGGGTGAGGGAGTCTCTGAGTTCAGGTGAGATCTCCTaGGGCACAGTCTTCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: LTITSYHIRDPGVRESLSSGEIS*GTVFRP Trigger: GGGTCTGAAGACTGTGCCCAAGGAGATCTCACCTGA...ACTCAGAGACTCCCTCACCCCTGGGTCCCTGATGTGGTAGGAGGTGATGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169489.2 |
||
| CDS TCA 90 bp | GGTGAGATCTCCTTGGGCACAGTCTTCAGACCCAAGTCAGAGCACTaGACAACCCGCAGGTGGCAGTGGCAACCGAAAGGACACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GEISLGTVFRPKSEH*TTRRWQWQPKGHMA Trigger: TGCCATGTGTCCTTTCGGTTGCCACTGCCACCTGCGGGTTGTTCAGTGCTCTGACTTGGGTCTGAAGACTGTGCCCAAGGAGATCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS TCA 90 bp | CAGGGTCTCAGGGAGATCTTTGGGGATGCCAGTGAGCTTGGCCTCTaGGATGCGCAGGTAATTGAGCTTCAGGCCATCAAAGGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGLREIFGDASELGL*DAQVIELQAIKGSW Trigger: CCAGGAGCCTTTGATGGCCTGAAGCTCAATTACCTGCGCATCTCAGAGGCCAAGCTCACTGGCATCCCCAAAGATCTCCCTGAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGGATGGAACAATGGCGGTGGCAGTGTGCTCTATCCATCTTTCCTAGCCCCGGAGATGTAGAGTTTTaGCAGCTTCCGCAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWMEQWRWQCALSIFPSPGDVEF*QLPQRA Trigger: AGCCCTCTGCGGAAGCTGCAAAAACTCTACATCTCC...GGGGCTAGGAAAGATGGATAGAGCACACTGCCACCGCCATTGTTCCATCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CAA 90 bp | TTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTAGGGAGCTGGGCAGGTaGGGAGGAATCTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLHLAMFLRDSHQGHHGRELGR*GGISTR Trigger: CCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCCT...ACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | GTTAAATTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATAGGGAGCTGGGCAGGTaGGGAGGAATCTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKFQRLRGMGERARPCAYRELGR*GGISTR Trigger: CCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCCT...ATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS CCA 90 bp | CTTTGCGGATACGGTTGTCATGGATTCGTAGTTCTACCAGGGAGCTaGGCAGGTTGGGAGGAATCTCCACCAGGTGGTTCTTGGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LCGYGCHGFVVLPGS*AGWEESPPGGSWRC Trigger: ACATCTCCAAGAACCACCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTATCCGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | GTTAAATTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATACGCCCTTGGGCACTTaGCGGATACGGTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: VKFQRLRGMGERARPCAYTPLGT*RIRLSW Trigger: CCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGT...ATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAATTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGCCCAACCTGTACAGCTaGGAGTATCGAAGTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFFIWLCSSETLTKATMVPNLYS*EYRSRS Trigger: GGACCTACTTCGATACTCCAAGCTGTACAGGTTGGG...CACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATCTCATTGATGCCCACCTaGGTGATGTTGTTGGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISSTPSCWVQLTITSYHISLMPT*VMLLEC Trigger: GCACTCCAACAACATCACCAAGGTGGGCATCAATGA...GATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGTCAAGTTCTGGGTAGGGCAATCAGGAAGATAGTTGCCCCATATTTGTTTAGGTGCTGGAGGCCTTaGAAGTCATCCTTGCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGQVLGRAIRKIVAPYLFRCWRP*KSSLRS Trigger: GCTTCGCAAGGATGACTTCAAAGGCCTCCAGCACCT...AAACAAATATGGGGCAACTATCTTCCTGATTGCCCTACCCAGAACTTGACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CAA 90 bp | AGAGATGGAAGGGGACAGGTCAATAACTCCAGAAGGAAGAAAAGTGTCAGGAAGACGCCCTTGGGCACTTaGCGGATACGGTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RDGRGQVNNSRRKKSVRKTPLGT*RIRLSW Trigger: CCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGT...CTTCCTGACACTTTTCTTCCTTCTGGAGTTATTGACCTGTCCCCTTCCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CAA 90 bp | AATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCCGCTGAACACGCCCTaGGGCACTTTGCGGATACGG | + |
|
Preference number: 5 (lower is better) Translates to: NIGEQRCCFFIWLCSSETPLNTP*GTLRIR Trigger: CCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGG...AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | CATAAGCAGCACTCCCTCTTGCTGGGTGCAACTGACCATCACCTCCTACCACATATAGGACAGAAGTCATaGATGCCCACCTTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HKQHSLLLGATDHHLLPHIGQKS*MPTLVM Trigger: CATCACCAAGGTGGGCATCAATGACTTCTGTCCTAT...ATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGGGAGTGCTGCTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS CCA 90 bp | TACGGTTGTCATGGATTCGTAGTTCTACCAGGGAGCTGGGCAGGTTaGGAGGAATCTCCACCAGGTGGTTCTTGGAGATGTAGAGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YGCHGFVVLPGSWAG*EESPPGGSWRCRVF Trigger: AAAAACTCTACATCTCCAAGAACCACCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAAGTTCTGGGTAGGGCAATCAGGAAGATAGTTGCCCCATATTTGTTTGTGTCAGGTGAGATCTCCTaGGGCACAGTCTTCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GQVLGRAIRKIVAPYLFVSGEIS*GTVFRP Trigger: GGGTCTGAAGACTGTGCCCAAGGAGATCTCACCTGA...CACAAACAAATATGGGGCAACTATCTTCCTGATTGCCCTACCCAGAACTTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTGGGGCAGTGAGTTAATATTGGGGAACAAAGGTGTTGCTTCTTCATCTAGGTGCTGGAGGCCTTaGAAGTCATCCTTGCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWWGSELILGNKGVASSSRCWRP*KSSLRS Trigger: GCTTCGCAAGGATGACTTCAAAGGCCTCCAGCACCT...AGATGAAGAAGCAACACCTTTGTTCCCCAATATTAACTCACTGCCCCACCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGCAGATGATCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCTTCTCATGGATCTaGGAGATCTTATTGTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: PGADDPCVCVCVCVCVCVAFSWI*EILLFT Trigger: GGTAAACAATAAGATCTCCAAGATCCATGAGAAGGC...CACACACACACACACACACACACACACACACACACACGGATCATCTGCCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGAGCTCAGAAATGTCATaGTTCTGCAGGTCTAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: CFFIWLCSSETLTKATMVSSEMS*FCRSSS Trigger: ACTGCTAGACCTGCAGAACAATGACATTTCTGAGCT...CACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTGATCTTGGAGATCTTATaGTTTACCAAGACCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: CFFIWLCSSETLTKATMVILEIL*FTKTRA Trigger: CGCCCTGGTCTTGGTAAACAATAAGATCTCCAAGAT...CACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS TCA 90 bp | TCTTATTGTTTACCAAGACCAGGGCGTAGAGGTGCTGGAGGCCTTTaGAGTCATCCTTGCGAAGCTCAGAAATGTCATTGTTCTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SYCLPRPGRRGAGGL*SHPCEAQKCHCSAG Trigger: ACCTGCAGAACAATGACATTTCTGAGCTTCGCAAGGATGACTTCAAAGGCCTCCAGCACCTCTACGCCCTGGTCTTGGTAAACAATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | TTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTCACCAAGGCCACCATGGTATCTTGGAGATCTTATaGTTTACCAAGACCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LLLHLAMFLRDSHQGHHGILEIL*FTKTRA Trigger: CGCCCTGGTCTTGGTAAACAATAAGATCTCCAAGAT...ACCATGGTGGCCTTGGTGAGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | TTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATATGCATCTTATAATTTCCAAATaGGATGGCCAGGCGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: FQRLRGMGERARPCAYMHLIISK*DGQAVS Trigger: ACTGACCGCCTGGCCATCCAATTTGGAAATTATAAG...ATGCATATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTCAAGTTCTGGGTAGGGCAATCAGGAAGATAGTTGCCCCATATTTGTTTAGCTCAGAAATGTCATaGTTCTGCAGGTCTAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GGQVLGRAIRKIVAPYLFSSEMS*FCRSSS Trigger: ACTGCTAGACCTGCAGAACAATGACATTTCTGAGCT...AAACAAATATGGGGCAACTATCTTCCTGATTGCCCTACCCAGAACTTGACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| CDS-3UTR CAA 90 bp | TTTCAAAGGTTGAGGGGAATGGGTGAGAGGGCCAGGCCATGTGCATATATGCATGCCTTCTCATGGATCTaGGAGATCTTATTGTTTACC | + |
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Preference number: 5 (lower is better) Translates to: FQRLRGMGERARPCAYMHAFSWI*EILLFT Trigger: GGTAAACAATAAGATCTCCAAGATCCATGAGAAGGC...ATGCATATATGCACATGGCCTGGCCCTCTCACCCATTCCCCTCAACCTTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | AATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTGGAGATGTAGAGTTTTaGCAGCTTCCGCAGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: NIGEQRCCFFIWLCSSETGDVEF*QLPQRA Trigger: AGCCCTCTGCGGAAGCTGCAAAAACTCTACATCTCC...AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | TATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTCTTCATTGATGCCCACCTaGGTGATGTTGTTGGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: YWGTKVLLLHLAMFLRDSSLMPT*VMLLEC Trigger: GCACTCCAACAACATCACCAAGGTGGGCATCAATGA...AGAGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTCAAGTTCTGGGTAGGGCAATCAGGAAGATAGTTGCCCCATATTTGTTTCTTATAATTTCCAAATaGGATGGCCAGGCGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GGQVLGRAIRKIVAPYLFLIISK*DGQAVS Trigger: ACTGACCGCCTGGCCATCCAATTTGGAAATTATAAG...AAACAAATATGGGGCAACTATCTTCCTGATTGCCCTACCCAGAACTTGACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033741.15 |
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| CDS-3UTR CAA 90 bp | TGGGGCAGTGAGTTAATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATCCTTTGAAGTCATCCTaGCGAAGCTCAGAAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: WGSELILGNKGVASSSGYPLKSS*RSSEMS Trigger: TGACATTTCTGAGCTTCGCAAGGATGACTTCAAAGG...ATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATTAACTCACTGCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS-3UTR CAA 90 bp | AATATTGGGGAACAAAGGTGTTGCTTCTTCATCTGGCTATGTTCCTCAGAGACTATAGGACAGAAGTCATaGATGCCCACCTTGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: NIGEQRCCFFIWLCSSETIGQKS*MPTLVM Trigger: CATCACCAAGGTGGGCATCAATGACTTCTGTCCTAT...AGTCTCTGAGGAACATAGCCAGATGAAGAAGCAACACCTTTGTTCCCCAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CCA 72 bp | AAGTCCCAGAAACCCTTCTGCTCAAAGGGCAAGGCCTaGCTCAGGGCCAGCAGCAAGGTGAGTAGCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: KSQKPFCSKGKA*LRASSKVSSHR Trigger: CCTGTGGCTACTCACCTTGCTGCTGGCCCTGAGCCAGGCCTTGCCCTTTGAGCAGAAGGGTTTCTGGGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 90 bp | TTCCGGAGCCCGCTGAACACGCCCTTGGGCACTTTGCGGATACGGTaGTCATGGATTCGTAGTTCTACCAGGGAGCTGGGCAGGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FRSPLNTPLGTLRIR*SWIRSSTRELGRLG Trigger: TCCCAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS TCA 72 bp | CGCCCATCTCAATGCAGTTCATGTTCCGGAGCCCGCTaGACACGCCCTTGGGCACTTTGCGGATACGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RPSQCSSCSGAR*TRPWALCGYGC Trigger: ACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACATGAACTGCATTGAGATGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CCA 72 bp | GGAGTGCAGATAGACAACCTGGAGGAGCTTGAGATCTaGGAGGCCAGCAGGCACCCGGGACAGCTTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: GVQIDNLEELEI*EASRHPGQLVV Trigger: AACAACAAGCTGTCCCGGGTGCCTGCTGGCCTCCCAGATCTCAAGCTCCTCCAGGTTGTCTATCTGCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 72 bp | CCGCTGAACACGCCCTTGGGCACTTTGCGGATACGGTaGTCATGGATTCGTAGTTCTACCAGGGAGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PLNTPLGTLRIR*SWIRSSTRELG Trigger: GCCCAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS TCA 72 bp | TCCTTGGGCACAGTCTTCAGACCCAAGTCAGAGCACTaGACAACCCGCAGGTGGCAGTGGCAACCGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLGTVFRPKSEH*TTRRWQWQPKG Trigger: TCCTTTCGGTTGCCACTGCCACCTGCGGGTTGTTCAGTGCTCTGACTTGGGTCTGAAGACTGTGCCCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 90 bp | ATGCAGTTCATGTTCCGGAGCCCGCTGAACACGCCCTTGGGCACTTaGCGGATACGGTTGTCATGGATTCGTAGTTCTACCAGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: MQFMFRSPLNTPLGT*RIRLSWIRSSTREL Trigger: CAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACATGAACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CCA 72 bp | AACACGCCCTTGGGCACTTTGCGGATACGGTTGTCATaGATTCGTAGTTCTACCAGGGAGCTGGGCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: NTPLGTLRIRLS*IRSSTRELGRL Trigger: CAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 72 bp | ATGTTCCGGAGCCCGCTGAACACGCCCTTGGGCACTTaGCGGATACGGTTGTCATGGATTCGTAGTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: MFRSPLNTPLGT*RIRLSWIRSST Trigger: GGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 72 bp | ATGCAGTTCATGTTCCGGAGCCCGCTGAACACGCCCTaGGGCACTTTGCGGATACGGTTGTCATGGATTCGT | + |
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Preference number: 6 (lower is better) Translates to: MQFMFRSPLNTP*GTLRIRLSWIR Trigger: ACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACATGAACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 90 bp | CCCATCTCAATGCAGTTCATGTTCCGGAGCCCGCTGAACACGCCCTaGGGCACTTTGCGGATACGGTTGTCATGGATTCGTAGTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: PISMQFMFRSPLNTP*GTLRIRLSWIRSST Trigger: GGTAGAACTACGAATCCATGACAACCGTATCCGCAAAGTGCCCAAGGGCGTGTTCAGCGGGCTCCGGAACATGAACTGCATTGAGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CCA 72 bp | CATGGATTCGTAGTTCTACCAGGGAGCTGGGCAGGTTaGGAGGAATCTCCACCAGGTGGTTCTTGGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: HGFVVLPGSWAG*EESPPGGSWRC Trigger: ACATCTCCAAGAACCACCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 72 bp | TCATGGATTCGTAGTTCTACCAGGGAGCTGGGCAGGTaGGGAGGAATCTCCACCAGGTGGTTCTTGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: SWIRSSTRELGR*GGISTRWFLEM Trigger: CATCTCCAAGAACCACCTGGTGGAGATTCCTCCCAACCTGCCCAGCTCCCTGGTAGAACTACGAATCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS TCA 72 bp | AGGGAGATCTTTGGGGATGCCAGTGAGCTTGGCCTCTaGGATGCGCAGGTAATTGAGCTTCAGGCCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: REIFGDASELGL*DAQVIELQAIK Trigger: TTTGATGGCCTGAAGCTCAATTACCTGCGCATCTCAGAGGCCAAGCTCACTGGCATCCCCAAAGATCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 90 bp | GTTGGGAGGAATCTCCACCAGGTGGTTCTTGGAGATGTAGAGTTTTaGCAGCTTCCGCAGAGGGCTAAAGGCCTTCTCATGGATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VGRNLHQVVLGDVEF*QLPQRAKGLLMDLG Trigger: TCCAAGATCCATGAGAAGGCCTTTAGCCCTCTGCGGAAGCTGCAAAAACTCTACATCTCCAAGAACCACCTGGTGGAGATTCCTCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS TCA 72 bp | TTACCAAGACCAGGGCGTAGAGGTGCTGGAGGCCTTTaGAGTCATCCTTGCGAAGCTCAGAAATGTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: LPRPGRRGAGGL*SHPCEAQKCHC Trigger: ACAATGACATTTCTGAGCTTCGCAAGGATGACTTCAAAGGCCTCCAGCACCTCTACGCCCTGGTCTTGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CAA 72 bp | AATCTCCACCAGGTGGTTCTTGGAGATGTAGAGTTTTaGCAGCTTCCGCAGAGGGCTAAAGGCCTTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: NLHQVVLGDVEF*QLPQRAKGLLM Trigger: CATGAGAAGGCCTTTAGCCCTCTGCGGAAGCTGCAAAAACTCTACATCTCCAAGAACCACCTGGTGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS GCA 72 bp | AAGTCATCCTTGCGAAGCTCAGAAATGTCATTGTTCTaGAGGTCTAGCAGTGTGGTGTCAGGTGAGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KSSLRSSEMSLF*RSSSVVSGEIS Trigger: GGAGATCTCACCTGACACCACACTGCTAGACCTGCAGAACAATGACATTTCTGAGCTTCGCAAGGATGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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| CDS CCA 72 bp | TTTTGCAGCTTCCGCAGAGGGCTAAAGGCCTTCTCATaGATCTTGGAGATCTTATTGTTTACCAAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: FCSFRRGLKAFS*ILEILLFTKTR Trigger: CCTGGTCTTGGTAAACAATAAGATCTCCAAGATCCATGAGAAGGCCTTTAGCCCTCTGCGGAAGCTGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033741.15 ENSMUST00000169489.2 |
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