Pregenerated sensors for BFSP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032556Ensembl transcript IDs: ENSMUST00000124310.5
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCCACTaGGGTTCTTCAGACGTCACCGGTGGGCTGCCGAGGAAGGCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: PQGAPSESARESSSH*GSSDVTGGLPRKAE Trigger: CTCTGCCTTCCTCGGCAGCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| 3UTR GCA 90 bp | GGGAGTCCAGCAGCCACTGAGGTTCTTCAGACGTCACCGGTGGGCTaGCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGGAAGTCGTTT | + |
|
Preference number: 1 (lower is better) Translates to: GSPAATEVLQTSPVG*RGRQSFLCEKRKSF Trigger: AAACGACTTCCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGCTGGACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCACGTCACCGGTGGGCTaGCGAGGAAGGCAGAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ASVVQATDYRNGSRILSTTSPVG*RGRQSF Trigger: AAAACTCTGCCTTCCTCGGCAGCCCACCGGTGACGT...GGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| 3UTR TCA 72 bp | GCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCCACTaGGGTTCTTCAGACGTCACCGGTGGGCTGCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: APSESARESSSH*GSSDVTGGLPR Trigger: CCTCGGCAGCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGCTGGACTCCCTAGCTGACTCAGACGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| 3UTR GCA 72 bp | GCAGCCACTGAGGTTCTTCAGACGTCACCGGTGGGCTaGCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AATEVLQTSPVG*RGRQSFLCEKR Trigger: CCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCGCACGCCAGCAGGTGTaGCCGCTCCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLHPQGAPSESARESSSARQQV*PLLLLL Trigger: CAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGC...GCTGCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | CTAGGGAGTCCAGCAGCCACTGAGGTTCTTCAGACGTCACCGGTGGGCTGCCGAAGGGATGACACCCTGTaGCTCTGCACGGGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSPAATEVLQTSPVGCRRDDTL*LCTGML Trigger: CAGCATGCCCGTGCAGAGGCACAGGGTGTCATCCCT...TCGGCAGCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGCTGGACTCCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR TCA 90 bp | AATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCGAGAGTGTGTTCCCCTaGGGGATGACACCCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLHPQGAPSESARESSSESVFP*GMTPCA Trigger: GGCACAGGGTGTCATCCCTCAGGGGAACACACTCTC...GCTGCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGCCACCTGCTGGTAGCTaGTGGCCCAGGAGGCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLQKWEQNSLHPQGAPSEPPAGS*WPRRRG Trigger: TCCGCGCCTCCTGGGCCAGCAGCTACCAGCAGGTGG...CTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | AGACGTCACCGGTGGGCTGCCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGGACCTGCTGGTAGCTGCTaGCCCAGGAGGCGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRHRWAAEEGRVFFVKRGPAGSC*PRRRGG Trigger: CCCTCCGCGCCTCCTGGGCCAGCAGCTACCAGCAGG...TCCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGGTGACGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR TCA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGTAGAAAGACACTGCTaGTGCCCAGGGCCCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKWEQNSLHPQGAPSESVERHC*CPGPGG Trigger: CCCGCCGGGCCCTGGGCATCAGCAGTGTCTTTCTAC...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCACAGAGCTCTTGGCCTTaGTCTCCAGGTGAGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRILSTPRELRLSQLGSPQSSWP*SPGEPA Trigger: TGCGGGCTCACCTGGAGAGCAAGGCCAAGAGCTCTG...TGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGGCCCGCTCCTGCTGCTaGTGTTCTGTCTCTGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQKWEQNSLHPQGAPSEARSCC*CSVSER Trigger: CCGCTCAGAGACAGAACAGCAGCAGCAGGAGCGGGC...CTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | CAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCTCAGCCTGGAGACTCTaGACTTGGCGTGAAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QNSLHPQGAPSESARESSSAWRL*TWREVS Trigger: CGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGA...GCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTAGGGAGTCCAGCAGCCACTGAGGTTCTTCAGACGTCACCGGTGGGCCACCTATGCCACCACTaGGTGCGACTCCTACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGSPAATEVLQTSPVGHLCHH*VRLLHR Trigger: TCTATGTAGGAGTCGCACCCAGTGGTGGCATAGGTG...GCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGCTGGACTCCCTAGCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | AGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTACCAGACCGGTGCCCATaGGGACATCTGCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNGSRILSTPRELRLSQLPDRCP*GHLLAP Trigger: TGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGG...TAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | TACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCAGTGCTGGGCGTCGTaGAAGCTGTTTTCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRNGSRILSTPRELRLSQQCWAS*KLFSRP Trigger: AGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTG...CTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTATGCAGTTCCATGTCATaGCAGTGCTGGGCGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNGSRILSTPRELRLSQLCSSMS*QCWASC Trigger: GCACGACGCCCAGCACTGGCATGACATGGAACTGCA...TAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTATGTGCCCGCTCCTGCTaGTGCTGTTCTGTCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNGSRILSTPRELRLSQLCARSC*CCSVSE Trigger: CTCAGAGACAGAACAGCAGCAGCAGGAGCGGGCACA...TAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGTGTTCCCCTGAGGGATaGCACCCTGTGCCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQATDYRNGSRILSTPRECSPEG*HPVPLH Trigger: GTGCAGAGGCACAGGGTGTCATCCCTCAGGGGAACA...CTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCCCTCTTCATAGCTTCTTaGCAGAAAGCCCAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSTPRELRLSQLGSPAALFIAS*QKAQFF Trigger: GAAGAACTGGGCTTTCTGTCAAGAAGCTATGAAGAG...GGCTGCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | CCGGTGGGCTGCCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGGAAGTCGTTTGACACCCTGTGCCTCTaGACGGGCATGCTGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVGCRGRQSFLCEKRKSFDTLCL*TGMLEL Trigger: CAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTC...AAACGACTTCCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | TACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGGCTATCCAGGGAGGATaGAGAGTGTGTTCCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRNGSRILSTPRELRLSQAIQGG*RVCSPE Trigger: CTCAGGGGAACACACTCTCCATCCTCCCTGGATAGC...CTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCGGAGCAGGCACGTTaGCAAGGCCTGAACTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGCSSYRLQKWEQNSLHPEQAR*QGLNSA Trigger: TGCGGAGTTCAGGCCTTGCCAACGTGCCTGCTCCGG...GTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | AGACGTCACCGGTGGGCTGCCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGGAAGTGTGATCCCTTTCTaGGCCCGGAGCAGGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRHRWAAEEGRVFFVKRGSVIPF*ARSRHV Trigger: AACGTGCCTGCTCCGGGCCCAGAAAGGGATCACACT...TCCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGGTGACGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCATGGGTCTGGGATACGTaGACCACCTCTGTCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKWEQNSLHPQGAPSESWVWDT*TTSVCC Trigger: GCAACAGACAGAGGTGGTCCACGTATCCCAGACCCA...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAACATCCTTCTGTAGCTaGCTCTTGCACGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKWEQNSLHPQGAPSESTSFCS*LLHASR Trigger: CCTGCTGGCGTGCAAGAGCCAGCTACAGAAGGATGT...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR TCA 90 bp | TACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGTTTCCAGTTCCTGGCTaGCTTGCTCCAGAGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRNGSRILSTPRELRLSQFPVPG*LAPEHA Trigger: TGCATGCTCTGGAGCAAGTCAGCCAGGAACTGGAAA...CTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | AGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGAGTTCCTGGCTGACTTaGTCCAGAGCATGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQKWEQNSLHPQGAPSESSWLT*SRACTL Trigger: CAAGGTGCATGCTCTGGAGCAAGTCAGCCAGGAACT...CTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCATACTTCCTCTTCCGCTaGCTTCCTGAATGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQKWEQNSLHPQGAPSESYFLFR*LPEWLL Trigger: GAGCAGCCATTCAGGAAGGCAGCGGAAGAGGAAGTA...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCACTGGTCCTGGATGCTaGGGGGCTATCCAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASVVQATDYRNGSRILSTTGPGC*GAIQGG Trigger: TCCTCCCTGGATAGCCCCCCAGCATCCAGGACCAGT...GGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAATGTCATGCCAGTGCTaGGCGTCGTGCAAGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQKWEQNSLHPQGAPSESMSCQC*ASCKLF Trigger: AAACAGCTTGCACGACGCCCAGCACTGGCATGACAT...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCATGGGGACATCTGCTTaGTCCAGCTCAGACCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASVVQATDYRNGSRILSTMGTSA*SSSDPA Trigger: GGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCAT...GGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | CCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCTCCATGTCATGCCAGTaGTGGGCGTCGTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRLFKLQTTEMGAEFSPPSMSCQ*WASCKL Trigger: CAGCTTGCACGACGCCCAGCACTGGCATGACATGGA...GGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | CCGGTGGGCTGCCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGGAAGTCGTTTACGGCACCCAGGTTCTaGAGTTCCATGTCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVGCRGRQSFLCEKRKSFTAPRF*SSMSCQ Trigger: CTGGCATGACATGGAACTGCAGAACCTGGGTGCCGT...AAACGACTTCCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | CCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCAGGTGTGCCCGCTCCTaGTGCTGCTGTTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRLFKLQTTEMGAEFSPPRCARS*CCCSVS Trigger: AGAGACAGAACAGCAGCAGCAGGAGCGGGCACACCT...GGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGTCTGTTGCTTAGCTTaGAGCAAGGCTCCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQKWEQNSLHPQGAPSESVCCLA*SKAPAS Trigger: AGAAGCAGGAGCCTTGCTCCAAGCTAAGCAACAGAC...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGGCCAGCTTTTCTTCTTaGGTCTGGGATACGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VQATDYRNGSRILSTPREASFSS*VWDTWT Trigger: GGTCCACGTATCCCAGACCCAAGAAGAAAAGCTGGC...CTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCTCCAGCTCAGACCCTaGCAGCTGTTTGTACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGCSSYRLQKWEQNSLHLQLRP*QLFVQN Trigger: GTTCTGTACAAACAGCTGGCAGGGTCTGAGCTGGAG...GTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | AGACGTCACCGGTGGGCTGCCGAGGAAGGCAGAGTTTTCTTTGTGAAAAGAGGACCAGAGCATGCACCTTaGTCATATATTCCACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRHRWAAEEGRVFFVKRGPEHAP*SYIPLG Trigger: GCCTAGTGGAATATATGACCAAGGTGCATGCTCTGG...TCCTCTTTTCACAAAGAAAACTCTGCCTTCCTCGGCAGCCCACCGGTGACGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGTGTGTTTCCAGTTCCTaGCTGACTTGCTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQATDYRNGSRILSTPRECVSSS*LTCSRA Trigger: TGCTCTGGAGCAAGTCAGCCAGGAACTGGAAACACA...CTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | CCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCTGGAGACTCTGGACTTaGCGTGAAGTGTCGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRLFKLQTTEMGAEFSPPWRLWT*REVSCN Trigger: GTTACACGACACTTCACGCCAAGTCCAGAGTCTCCA...GGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCGCTGCCTTCCTGAATaGCTGCTCGTTTTCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVVQATDYRNGSRILSTRCLPE*LLVFIS Trigger: AGATATGAAAACGAGCAGCCATTCAGGAAGGCAGCG...GGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGGTTGTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACGCCTTCCTGAATGGCTaGTCGTTTTCATATCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGCSSYRLQKWEQNSLHAFLNG*SFSYLS Trigger: AGAGAGATATGAAAACGAGCAGCCATTCAGGAAGGC...GTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAACAACCGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | GGGCCCGGCGGGTCACTCGGGCACCGAGACCACCTATGCCACCACTaGGTGCGACTCCTACATAGACCCCAGGGGCACGGACGAGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: GPGGSLGHRDHLCHH*VRLLHRPQGHGRGY Trigger: GTAGCCTCGTCCGTGCCCCTGGGGTCTATGTAGGAGTCGCACCCAGTGGTGGCATAGGTGGTCTCGGTGCCCGAGTGACCCGCCGGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 90 bp | GCACGCCAGCAGGTGTGCCCGCTCCTGCTGCTGCTGTTCTGTCTCTaGGCGGATCTCTGCCAGCTCTGCCTCCAGCCTGCCCACCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARQQVCPLLLLLFCL*ADLCQLCLQPAHHG Trigger: GCCGTGGTGGGCAGGCTGGAGGCAGAGCTGGCAGAGATCCGCTCAGAGACAGAACAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | CCGGCGGGTCACTCGGGCACCGAGACCACCTATGCCACCACTGGGTaGGACTCCTACATAGACCCCAGGGGCACGGACGAGGCTACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAGHSGTETTYATTG*DSYIDPRGTDEATH Trigger: GTGGGTAGCCTCGTCCGTGCCCCTGGGGTCTATGTAGGAGTCGCACCCAGTGGTGGCATAGGTGGTCTCGGTGCCCGAGTGACCCGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | GGAGCCGGGCGTTTTCTAGGACAGCCTCTCCCACCTGCTGGTAGCTaGTGGCCCAGGAGGCGCGGAGGGCATCCCAGCCTCCAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GAGRFLGQPLPPAGS*WPRRRGGHPSLQSS Trigger: AGAGCTCTGGAGGCTGGGATGCCCTCCGCGCCTCCTGGGCCAGCAGCTACCAGCAGGTGGGAGAGGCTGTCCTAGAAAACGCCCGGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | GCCGGGCGTTTTCTAGGACAGCCTCTCCCACCTGCTGGTAGCTGCTaGCCCAGGAGGCGCGGAGGGCATCCCAGCCTCCAGAGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGRFLGQPLPPAGSC*PRRRGGHPSLQSSW Trigger: CCAAGAGCTCTGGAGGCTGGGATGCCCTCCGCGCCTCCTGGGCCAGCAGCTACCAGCAGGTGGGAGAGGCTGTCCTAGAAAACGCCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 90 bp | CGTTGGCAAGGCCTGAACTCCGCAGGCCCTGTAGAAAGACACTGCTaGTGCCCAGGGCCCGGCGGGTCACTCGGGCACCGAGACCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: RWQGLNSAGPVERHC*CPGPGGSLGHRDHL Trigger: TAGGTGGTCTCGGTGCCCGAGTGACCCGCCGGGCCCTGGGCATCAGCAGTGTCTTTCTACAGGGCCTGCGGAGTTCAGGCCTTGCCAACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | TGCTGGCCCAGGAGGCGCGGAGGGCATCCCAGCCTCCAGAGCTCTTaGCCTTGCTCTCCAGGTGAGCCCGCAGTTGTGTTTCCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CWPRRRGGHPSLQSS*PCSPGEPAVVFPVP Trigger: AGGAACTGGAAACACAACTGCGGGCTCACCTGGAGAGCAAGGCCAAGAGCTCTGGAGGCTGGGATGCCCTCCGCGCCTCCTGGGCCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | GAGGATGGAGAGTGTGTTCCCCTGAGGGATGACACCCTGTGCCTCTaGACGGGCATGCTGGAGTTGGTTCCCGAGGGCAAGTCCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EDGECVPLRDDTLCL*TGMLELVPEGKSAA Trigger: GGCAGCGGACTTGCCCTCGGGAACCAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCATCCCTCAGGGGAACACACTCTCCATCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CAA 90 bp | ATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCCACGGGCATGCTGGAGTaGGTTCCCGAGGGCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILSTPRELRLSQLGSPAATGMLE*VPEGKS Trigger: GGACTTGCCCTCGGGAACCAACTCCAGCATGCCCGT...GGCTGCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | TCCAGGGAGGATGGAGAGTGTGTTCCCCTGAGGGATGACACCCTGTaGCTCTGCACGGGCATGCTGGAGTTGGTTCCCGAGGGCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SREDGECVPLRDDTL*LCTGMLELVPEGKS Trigger: GGACTTGCCCTCGGGAACCAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCATCCCTCAGGGGAACACACTCTCCATCCTCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | TCTGCCAGCTCTGCCTCCAGCCTGCCCACCACGGCACCCAGGTTCTaGAGTTCCATGTCATGCCAGTGCTGGGCGTCGTGCAAGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SASSASSLPTTAPRF*SSMSCQCWASCKLF Trigger: AAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGCCGTGGTGGGCAGGCTGGAGGCAGAGCTGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | TTCTGTAGCTGGCTCTTGCACGCCAGCAGGTGTGCCCGCTCCTGCTaGTGCTGTTCTGTCTCTGAGCGGATCTCTGCCAGCTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSWLLHASRCARSC*CCSVSERISASSAS Trigger: GGAGGCAGAGCTGGCAGAGATCCGCTCAGAGACAGAACAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGCAAGAGCCAGCTACAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | CCAGCAGGGCGTGGTAGGATGCCACATCCTTCTGTAGCTGGCTCTTaGACGCCAGCAGGTGTGCCCGCTCCTGCTGCTGCTGTTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAGRGRMPHPSVAGS*TPAGVPAPAAAVLS Trigger: AGACAGAACAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGCAAGAGCCAGCTACAGAAGGATGTGGCATCCTACCACGCCCTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 90 bp | CGGAGGGCATCCCAGCCTCCAGAGCTCTTGGCCTTGCTCTCCAGGTaGGCCCGCAGTTGTGTTTCCAGTTCCTGGCTGACTTGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRASQPPELLALLSR*ARSCVSSSWLTCSR Trigger: TCTGGAGCAAGTCAGCCAGGAACTGGAAACACAACTGCGGGCTCACCTGGAGAGCAAGGCCAAGAGCTCTGGAGGCTGGGATGCCCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | CTGCCCACCACGGCACCCAGGTTCTGCAGTTCCATGTCATGCCAGTaGTGGGCGTCGTGCAAGCTGTTTTCCAGGCCTCGTTTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPTTAPRFCSSMSCQ*WASCKLFSRPRFRA Trigger: GGCTCTGAAACGAGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGCCGTGGTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | CCCACCACGGCACCCAGGTTCTGCAGTTCCATGTCATGCCAGTGCTaGGCGTCGTGCAAGCTGTTTTCCAGGCCTCGTTTCAGAGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PTTAPRFCSSMSCQC*ASCKLFSRPRFRAR Trigger: ACGGGCTCTGAAACGAGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGCCGTGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTAGGGAGTCCAGCAGCCACTGAGGTTCTTCAGACGTCACCGGTGGGCCATGGGGACATCTGCTaGCTCCAGCTCAGACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQLGSPAATEVLQTSPVGHGDIC*LQLRPC Trigger: GCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATG...GCCCACCGGTGACGTCTGAAGAACCTCAGTGGCTGCTGGACTCCCTAGCTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CAA 90 bp | ATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAGCTAGGGAGTCCAGCAGCCCAGTTCCTGGCTGACTaGCTCCAGAGCATGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILSTPRELRLSQLGSPAAQFLAD*LQSMHL Trigger: AAGGTGCATGCTCTGGAGCAAGTCAGCCAGGAACTG...GGCTGCTGGACTCCCTAGCTGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | TCTCCCACTGAACTCGGATCGTCTCAAGGACATCATCCAGACCGGTaGCCATGGGGACATCTGCTTGCTCCAGCTCAGACCCTGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPTELGSSQGHHPDR*PWGHLLAPAQTLPA Trigger: AGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTCCTTGAGACGATCCGAGTTCAGTGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | TATCTCTCTTTAAAGTCATCCGCACCGGCCTGGATCGTCTCCATCTaGAGCAGGAGCCGGGCGTTTTCTAGGACAGCCTCTCCCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSLKSSAPAWIVSI*SRSRAFSRTASPTC Trigger: GCAGGTGGGAGAGGCTGTCCTAGAAAACGCCCGGCTCCTGCTGCAGATGGAGACGATCCAGGCCGGTGCGGATGACTTTAAAGAGAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | GCACCCAGGTTCTGCAGTTCCATGTCATGCCAGTGCTGGGCGTCGTaGAAGCTGTTTTCCAGGCCTCGTTTCAGAGCCCGTAAAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: APRFCSSMSCQCWAS*KLFSRPRFRARKDS Trigger: GGAATCTTTACGGGCTCTGAAACGAGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | ACTGAACTCGGATCGTCTCAAGGACATCATCCAGACCGGTGCCCATaGGGACATCTGCTTGCTCCAGCTCAGACCCTGCCAGCTGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TELGSSQGHHPDRCP*GHLLAPAQTLPAVC Trigger: ACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTCCTTGAGACGATCCGAGTTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | GATCGTCTCAAGGACATCATCCAGACCGGTGCCCATGGGGACATCTaGTTGCTCCAGCTCAGACCCTGCCAGCTGTTTGTACAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: DRLKDIIQTGAHGDI*LLQLRPCQLFVQNL Trigger: AAGGTTCTGTACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTCCTTGAGACGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | TTCAGAGCCCGTAAAGATTCCGTCTCAGCCTGGAGACTCTGGACTTaGCGTGAAGTGTCGTGTAACTCTACACTGAGGGCAGCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRARKDSVSAWRLWT*REVSCNSTLRAAAS Trigger: GCTGGCTGCTGCCCTCAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGAGACGGAATCTTTACGGGCTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 90 bp | CCTTGCTCTCCAGGTGAGCCCGCAGTTGTGTTTCCAGTTCCTGGCTaGCTTGCTCCAGAGCATGCACCTTGGTCATATATTCCACTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCSPGEPAVVFPVPG*LAPEHAPWSYIPLG Trigger: GCCTAGTGGAATATATGACCAAGGTGCATGCTCTGGAGCAAGTCAGCCAGGAACTGGAAACACAACTGCGGGCTCACCTGGAGAGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 90 bp | AAGGCTCCTGCTTCTGCTCGGTTCTTTTCCACATCTCTCTCCCACTaGACTCGGATCGTCTCAAGGACATCATCCAGACCGGTGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KAPASARFFSTSLSH*TRIVSRTSSRPVPM Trigger: CATGGGCACCGGTCTGGATGATGTCCTTGAGACGATCCGAGTTCAGTGGGAGAGAGATGTGGAAAAGAACCGAGCAGAAGCAGGAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 90 bp | CCTGGAGACTCTGGACTTGGCGTGAAGTGTCGTGTAACTCTACACTaGGGGCAGCAGCCAGCTTTTCTTCTTGGGTCTGGGATACGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGDSGLGVKCRVTLH*GQQPAFLLGSGIRG Trigger: TCCACGTATCCCAGACCCAAGAAGAAAAGCTGGCTGCTGCCCTCAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 90 bp | CAGACCGGTGCCCATGGGGACATCTGCTTGCTCCAGCTCAGACCCTaGCAGCTGTTTGTACAGAACCTTCACATCCTCTTCATAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTGAHGDICLLQLRP*QLFVQNLHILFIAS Trigger: AGAAGCTATGAAGAGGATGTGAAGGTTCTGTACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | CCTCGTTTCAGAGCCCGTAAAGATTCCGTCTCAGCCTGGAGACTCTaGACTTGGCGTGAAGTGTCGTGTAACTCTACACTGAGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRFRARKDSVSAWRL*TWREVSCNSTLRAA Trigger: TGCTGCCCTCAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGAGACGGAATCTTTACGGGCTCTGAAACGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CAA 90 bp | CTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGCTCCGTCTGAGTCAAGCCAGCTTTTCTTCTaGGGTCTGGGATACGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQKWEQNSLHPQGAPSESSQLFF*GLGYVD Trigger: GTCCACGTATCCCAGACCCAAGAAGAAAAGCTGGCT...TGACTCAGACGGAGCTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | GTGTCGTGTAACTCTACACTGAGGGCAGCAGCCAGCTTTTCTTCTTaGGTCTGGGATACGTGGACCACCTCTGTCTGTTGCTTAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSCNSTLRAAASFSS*VWDTWTTSVCCLAW Trigger: CCAAGCTAAGCAACAGACAGAGGTGGTCCACGTATCCCAGACCCAAGAAGAAAAGCTGGCTGCTGCCCTCAGTGTAGAGTTACACGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS-3UTR CAA 90 bp | GTTCAAGCTACAGACTACAGAAATGGGAGCAGAATTCTCTCCACCCCCAGGGAGGACCACCTCTGTCTGTaGCTTAGCTTGGAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQATDYRNGSRILSTPREDHLCL*LSLEQG Trigger: GCCTTGCTCCAAGCTAAGCAACAGACAGAGGTGGTC...CTCCCTGGGGGTGGAGAGAATTCTGCTCCCATTTCTGTAGTCTGTAGCTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | TGTAACTCTACACTGAGGGCAGCAGCCAGCTTTTCTTCTTGGGTCTaGGATACGTGGACCACCTCTGTCTGTTGCTTAGCTTGGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CNSTLRAAASFSSWV*DTWTTSVCCLAWSK Trigger: CTTGCTCCAAGCTAAGCAACAGACAGAGGTGGTCCACGTATCCCAGACCCAAGAAGAAAAGCTGGCTGCTGCCCTCAGTGTAGAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 90 bp | TTTTCCAGGCCTCGTTTCAGAGCCCGTAAAGATTCCGTCTCAGCCTaGAGACTCTGGACTTGGCGTGAAGTGTCGTGTAACTCTACACTG | + |
|
Preference number: 5 (lower is better) Translates to: FSRPRFRARKDSVSA*RLWTWREVSCNSTL Trigger: CAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGAGACGGAATCTTTACGGGCTCTGAAACGAGGCCTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | GGGCCCGGCGGGTCACTCGGGCACCGAGACCACCTATaGCACCACTGGGTGCGACTCCTACATAGACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGGSLGHRDHL*HHWVRLLHRPQ Trigger: CTGGGGTCTATGTAGGAGTCGCACCCAGTGGTGGCATAGGTGGTCTCGGTGCCCGAGTGACCCGCCGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | CGTTTTCTAGGACAGCCTCTCCCACCTGCTGGTAGCTaGTGGCCCAGGAGGCGCGGAGGGCATCCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFLGQPLPPAGS*WPRRRGGHPSL Trigger: GAGGCTGGGATGCCCTCCGCGCCTCCTGGGCCAGCAGCTACCAGCAGGTGGGAGAGGCTGTCCTAGAAAACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | TTTCTAGGACAGCCTCTCCCACCTGCTGGTAGCTGCTaGCCCAGGAGGCGCGGAGGGCATCCCAGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLGQPLPPAGSC*PRRRGGHPSLQ Trigger: CTGGAGGCTGGGATGCCCTCCGCGCCTCCTGGGCCAGCAGCTACCAGCAGGTGGGAGAGGCTGTCCTAGAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | CACTCGGGCACCGAGACCACCTATGCCACCACTGGGTaGGACTCCTACATAGACCCCAGGGGCACGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: HSGTETTYATTG*DSYIDPRGTDE Trigger: CTCGTCCGTGCCCCTGGGGTCTATGTAGGAGTCGCACCCAGTGGTGGCATAGGTGGTCTCGGTGCCCGAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | TCTGCCTCCAGCCTGCCCACCACGGCACCCAGGTTCTaGAGTTCCATGTCATGCCAGTGCTGGGCGTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SASSLPTTAPRF*SSMSCQCWASC Trigger: GCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGCCGTGGTGGGCAGGCTGGAGGCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | GGGTCACTCGGGCACCGAGACCACCTATGCCACCACTaGGTGCGACTCCTACATAGACCCCAGGGGCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLGHRDHLCHH*VRLLHRPQGHG Trigger: TCCGTGCCCCTGGGGTCTATGTAGGAGTCGCACCCAGTGGTGGCATAGGTGGTCTCGGTGCCCGAGTGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | TGGCTCTTGCACGCCAGCAGGTGTGCCCGCTCCTGCTaGTGCTGTTCTGTCTCTGAGCGGATCTCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WLLHASRCARSC*CCSVSERISAS Trigger: GCTGGCAGAGATCCGCTCAGAGACAGAACAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGCAAGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | AGCTGGCTCTTGCACGCCAGCAGGTGTGCCCGCTCCTaGTGCTGCTGTTCTGTCTCTGAGCGGATCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWLLHASRCARS*CCCSVSERISA Trigger: GGCAGAGATCCGCTCAGAGACAGAACAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGCAAGAGCCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 72 bp | GATGACACCCTGTGCCTCTGCACGGGCATGCTGGAGTaGGTTCCCGAGGGCAAGTCCGCTGCCACTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DDTLCLCTGMLE*VPEGKSAATLL Trigger: GAGGAGAGTGGCAGCGGACTTGCCCTCGGGAACCAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | GAGTGTGTTCCCCTGAGGGATGACACCCTGTGCCTCTaGACGGGCATGCTGGAGTTGGTTCCCGAGGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ECVPLRDDTLCL*TGMLELVPEGK Trigger: CTTGCCCTCGGGAACCAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCATCCCTCAGGGGAACACACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | CTCTTGCACGCCAGCAGGTGTGCCCGCTCCTGCTGCTaGTGTTCTGTCTCTGAGCGGATCTCTGCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLHASRCARSCC*CSVSERISASS Trigger: AGAGCTGGCAGAGATCCGCTCAGAGACAGAACAGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGCAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | CGTGGTAGGATGCCACATCCTTCTGTAGCTGGCTCTTaGACGCCAGCAGGTGTGCCCGCTCCTGCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGRMPHPSVAGS*TPAGVPAPAAA Trigger: AGCAGCAGCAGGAGCGGGCACACCTGCTGGCGTGCAAGAGCCAGCTACAGAAGGATGTGGCATCCTACCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | ATGACACCCTGTGCCTCTGCACGGGCATGCTGGAGTTaGTTCCCGAGGGCAAGTCCGCTGCCACTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTPCASARACWS*FPRASPLPLSS Trigger: AGAGGAGAGTGGCAGCGGACTTGCCCTCGGGAACCAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | ACGGACGAGGCTACCCACAGCACTGGTCCTGGATGCTaGGGGGCTATCCAGGGAGGATGGAGAGTGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TDEATHSTGPGC*GAIQGGWRVCS Trigger: GGAACACACTCTCCATCCTCCCTGGATAGCCCCCCAGCATCCAGGACCAGTGCTGTGGGTAGCCTCGTCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | GATGGAGAGTGTGTTCCCCTGAGGGATGACACCCTGTaGCTCTGCACGGGCATGCTGGAGTTGGTTCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DGECVPLRDDTL*LCTGMLELVPE Trigger: CTCGGGAACCAACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCATCCCTCAGGGGAACACACTCTCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 72 bp | ATCCAGGGAGGATGGAGAGTGTGTTCCCCTGAGGGATaGCACCCTGTGCCTCTGCACGGGCATGCTGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: IQGGWRVCSPEG*HPVPLHGHAGV Trigger: AACTCCAGCATGCCCGTGCAGAGGCACAGGGTGTCATCCCTCAGGGGAACACACTCTCCATCCTCCCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | ACGGCACCCAGGTTCTGCAGTTCCATGTCATGCCAGTaGTGGGCGTCGTGCAAGCTGTTTTCCAGGCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TAPRFCSSMSCQ*WASCKLFSRPR Trigger: ACGAGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 90 bp | CCAGCCTCCAGAGCTCTTGGCCTTGCTCTCCAGGTGAGCCCGCAGTaGTGTTTCCAGTTCCTGGCTGACTTGCTCCAGAGCATGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: PASRALGLALQVSPQ*CFQFLADLLQSMHL Trigger: AAGGTGCATGCTCTGGAGCAAGTCAGCCAGGAACTGGAAACACAACTGCGGGCTCACCTGGAGAGCAAGGCCAAGAGCTCTGGAGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | TTAAAGTCATCCGCACCGGCCTGGATCGTCTCCATCTaGAGCAGGAGCCGGGCGTTTTCTAGGACAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKSSAPAWIVSI*SRSRAFSRTAS Trigger: AGAGGCTGTCCTAGAAAACGCCCGGCTCCTGCTGCAGATGGAGACGATCCAGGCCGGTGCGGATGACTTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | GAACTCGGATCGTCTCAAGGACATCATCCAGACCGGTaGCCATGGGGACATCTGCTTGCTCCAGCTCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: ELGSSQGHHPDR*PWGHLLAPAQT Trigger: GGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTCCTTGAGACGATCCGAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | GCACCCAGGTTCTGCAGTTCCATGTCATGCCAGTGCTaGGCGTCGTGCAAGCTGTTTTCCAGGCCTCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: APRFCSSMSCQC*ASCKLFSRPRF Trigger: GAAACGAGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAACCTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 72 bp | AGAGCTCTTGGCCTTGCTCTCCAGGTGAGCCCGCAGTaGTGTTTCCAGTTCCTGGCTGACTTGCTCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RALGLALQVSPQ*CFQFLADLLQS Trigger: GCTCTGGAGCAAGTCAGCCAGGAACTGGAAACACAACTGCGGGCTCACCTGGAGAGCAAGGCCAAGAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 72 bp | GACATCATCCAGACCGGTGCCCATGGGGACATCTGCTaGCTCCAGCTCAGACCCTGCCAGCTGTTTGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: DIIQTGAHGDIC*LQLRPCQLFVQ Trigger: CTGTACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 90 bp | CGTCTCAAGGACATCATCCAGACCGGTGCCCATGGGGACATCTGCTaGCTCCAGCTCAGACCCTGCCAGCTGTTTGTACAGAACCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLKDIIQTGAHGDIC*LQLRPCQLFVQNLH Trigger: GTGAAGGTTCTGTACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTCCTTGAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | AAGGACATCATCCAGACCGGTGCCCATGGGGACATCTaGTTGCTCCAGCTCAGACCCTGCCAGCTGTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KDIIQTGAHGDI*LLQLRPCQLFV Trigger: TACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGCACCGGTCTGGATGATGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | TCTTGGGTCTGGGATACGTGGACCACCTCTGTCTGTTaGTTAGCTTGGAGCAAGGCTCCTGCTTCTGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SWVWDTWTTSVC*LAWSKAPASAR Trigger: CCGAGCAGAAGCAGGAGCCTTGCTCCAAGCTAAGCAACAGACAGAGGTGGTCCACGTATCCCAGACCCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | TTCTGCAGTTCCATGTCATGCCAGTGCTGGGCGTCGTaGAAGCTGTTTTCCAGGCCTCGTTTCAGAGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FCSSMSCQCWAS*KLFSRPRFRAR Trigger: ACGGGCTCTGAAACGAGGCCTGGAAAACAGCTTGCACGACGCCCAGCACTGGCATGACATGGAACTGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | GCCCATGGGGACATCTGCTTGCTCCAGCTCAGACCCTaGCAGCTGTTTGTACAGAACCTTCACATCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AHGDICLLQLRP*QLFVQNLHILF Trigger: GAAGAGGATGTGAAGGTTCTGTACAAACAGCTGGCAGGGTCTGAGCTGGAGCAAGCAGATGTCCCCATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 72 bp | TCTGGACTTGGCGTGAAGTGTCGTGTAACTCTACACTaGGGGCAGCAGCCAGCTTTTCTTCTTGGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLGVKCRVTLH*GQQPAFLLGSG Trigger: CCCAGACCCAAGAAGAAAAGCTGGCTGCTGCCCTCAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | TGGGATACGTGGACCACCTCTGTCTGTTGCTTAGCTTaGAGCAAGGCTCCTGCTTCTGCTCGGTTCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WDTWTTSVCCLA*SKAPASARFFS Trigger: GGAAAAGAACCGAGCAGAAGCAGGAGCCTTGCTCCAAGCTAAGCAACAGACAGAGGTGGTCCACGTATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | ACACTGAGGGCAGCAGCCAGCTTTTCTTCTTGGGTCTaGGATACGTGGACCACCTCTGTCTGTTGCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLRAAASFSSWV*DTWTTSVCCLA Trigger: AGCTAAGCAACAGACAGAGGTGGTCCACGTATCCCAGACCCAAGAAGAAAAGCTGGCTGCTGCCCTCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | AACTCTACACTGAGGGCAGCAGCCAGCTTTTCTTCTTaGGTCTGGGATACGTGGACCACCTCTGTCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NSTLRAAASFSS*VWDTWTTSVCC Trigger: GCAACAGACAGAGGTGGTCCACGTATCCCAGACCCAAGAAGAAAAGCTGGCTGCTGCCCTCAGTGTAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | CCTCGTTTCAGAGCCCGTAAAGATTCCGTCTCAGCCTaGAGACTCTGGACTTGGCGTGAAGTGTCGTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRFRARKDSVSA*RLWTWREVSCN Trigger: GTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGAGACGGAATCTTTACGGGCTCTGAAACGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 72 bp | CTGGGATACGTGGACCACCTCTGTCTGTTGCTTAGCTaGGAGCAAGGCTCCTGCTTCTGCTCGGTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGYVDHLCLLLS*EQGSCFCSVLF Trigger: GAAAAGAACCGAGCAGAAGCAGGAGCCTTGCTCCAAGCTAAGCAACAGACAGAGGTGGTCCACGTATCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS TCA 72 bp | CCAGGTGAGCCCGCAGTTGTGTTTCCAGTTCCTGGCTaGCTTGCTCCAGAGCATGCACCTTGGTCATATATT | + |
|
Preference number: 6 (lower is better) Translates to: PGEPAVVFPVPG*LAPEHAPWSYI Trigger: AATATATGACCAAGGTGCATGCTCTGGAGCAAGTCAGCCAGGAACTGGAAACACAACTGCGGGCTCACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | CGTAAAGATTCCGTCTCAGCCTGGAGACTCTGGACTTaGCGTGAAGTGTCGTGTAACTCTACACTGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKDSVSAWRLWT*REVSCNSTLRA Trigger: TGCCCTCAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGAGACGGAATCTTTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CCA 72 bp | AGAGCCCGTAAAGATTCCGTCTCAGCCTGGAGACTCTaGACTTGGCGTGAAGTGTCGTGTAACTCTACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RARKDSVSAWRL*TWREVSCNSTL Trigger: CAGTGTAGAGTTACACGACACTTCACGCCAAGTCCAGAGTCTCCAGGCTGAGACGGAATCTTTACGGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 72 bp | GTGAGCCCGCAGTTGTGTTTCCAGTTCCTGGCTGACTaGCTCCAGAGCATGCACCTTGGTCATATATTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VSPQLCFQFLAD*LQSMHLGHIFH Trigger: GTGGAATATATGACCAAGGTGCATGCTCTGGAGCAAGTCAGCCAGGAACTGGAAACACAACTGCGGGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS GCA 72 bp | TGTCTGTTGCTTAGCTTGGAGCAAGGCTCCTGCTTCTaGTCGGTTCTTTTCCACATCTCTCTCCCACTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CLLLSLEQGSCF*SVLFHISLPLN Trigger: GTTCAGTGGGAGAGAGATGTGGAAAAGAACCGAGCAGAAGCAGGAGCCTTGCTCCAAGCTAAGCAACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||
| CDS CAA 72 bp | AGATCCGTCTTTGTCAAATTAGCTTCATCGATGACTTaGTACAGGGAACTTACTTCCTCTTCCGCTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSVFVKLASSMT*YRELTSSSAAF Trigger: GAAGGCAGCGGAAGAGGAAGTAAGTTCCCTGTACAAAGTCATCGATGAAGCTAATTTGACAAAGACGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124310.5 |
||