Pregenerated sensors for BFSP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027420Ensembl transcript IDs: ENSMUST00000028907.14, ENSMUST00000099296.4
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATaGAGACAGGTTGACTATGATCTAATCCAAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: SSLMKVIGGHLQ*RQVDYDLIQTG Trigger: TCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCTCTCGAGCCGCGCGTaGTCGGCTGTCAGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPLSSRA*SAVRSR Trigger: CCGGGACCTGACAGCCGAGCACGCGCGGCTCGAGAG...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | TCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTGCTCGCCCAGGCGCTaGAAGGCGTCGAGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SKQEPISKPSSHTARTLSCSPRR*KASSCR Trigger: GCGGCAGCTCGACGCCTTCCAGCGCCTGGGCGAGCA...GGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | AAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCTGCTCGCCCAGGCGCTaGAAGGCGTCGAGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KQEPISKPSSHTARTLSSCSPRR*KASSCR Trigger: GCGGCAGCTCGACGCCTTCCAGCGCCTGGGCGAGCA...GGAGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTGTGCCTGCAGGTGGGTaGCTGCCTCTCGGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPVPAGG*LPLGPP Trigger: AGGAGGGCCGAGAGGCAGTCACCCACCTGCAGGCAC...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | GATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACCACTGGATCCAAGGCTaGGAGGGGCCCCATGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: DLIQTGAHLKALLPHCPDHWIQG*EGPHGS Trigger: CGAGCCATGGGGCCCCTCTCAGCCTTGGATCCAGTG...GTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | GACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGCTGGACCTGGACTaGCACGCGCTCGCCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: DYDLIQTGAHLKALLPHCPLDLD*HALAQR Trigger: GCGCTGGGCGAGCGCGTGGCAGTCCAGGTCCAGCGG...GCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | GACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCTCCTCGGGCCCGGGCTaGTCGCCCAGGCGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DYDLIQTGAHLKALLPHCSSGPG*SPRRWK Trigger: CTTCCAGCGCCTGGGCGAGCAGCCCGGGCCCGAGGA...GCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | TCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCAGTGGTCACCTTCCCTaGCCTGGGGAACGCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SKQEPISKPSSHTARTLSSGHLP*PGERPV Trigger: GACAGGGCGTTCCCCAGGGCAGGGAAGGTGACCACT...GGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | AAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCAGTGGTCACCTTCCCTaGCCTGGGGAACGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQEPISKPSSHTARTLSSSGHLP*PGERPV Trigger: GACAGGGCGTTCCCCAGGGCAGGGAAGGTGACCACT...GGAGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCATCGTCGAGCGCGCGCTaGGCCTCGGCCTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVDYDLIQTGAHLKALLPSSSAR*ASASCL Trigger: GAGGCAGGAGGCCGAGGCGCAGCGCGCGCTCGACGA...TGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTATCTGGCCCCCGTCTaGCACATCCTCAGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTYLAPV*HILRTP Trigger: GGGGGTCCTGAGGATGTGCCAGACGGGGGCCAGATA...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | AAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCACCCTGCTGATGGTTTaGGTGGTCACCTTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KQEPISKPSSHTARTLSSTLLMV*VVTFPA Trigger: GGCAGGGAAGGTGACCACTCAAACCATCAGCAGGGT...GGAGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTCCCACTGGTCCACCCTaGTTGGACCCAGACGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTPTGPP*LDPDVC Trigger: ACAGACGTCTGGGTCCAATCAGGGTGGACCAGTGGG...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCAGCTCAGCTTTCTGTaGCTGCAGGTGGGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPQLSFL*LQVGDC Trigger: GCAGTCACCCACCTGCAGGCACAGAAAGCTGAGCTG...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCAGGACAGGGTCTCCTaGTCCCCTCAGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPQDRVS*SPQLPS Trigger: AGAAGGAAGCTGAGGGGAGCAGGAGACCCTGTCCTG...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTCACCTTCCCTGCCCTaGGGAACGCCCTGTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTSPSLP*GTPCPF Trigger: GAATGGACAGGGCGTTCCCCAGGGCAGGGAAGGTGA...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | GACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCACTGGATCCAAGGCTaGGAGGGGCCCCATGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DYDLIQTGAHLKALLPHCHWIQG*EGPHGS Trigger: CGAGCCATGGGGCCCCTCTCAGCCTTGGATCCAGTG...GCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCCGCTGGACCTGGACTaGCACGCGCTCGCCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKAPLDLD*HALAQR Trigger: GCGCTGGGCGAGCGCGTGGCAGTCCAGGTCCAGCGG...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCTCGTCGAGCGCGCGCTaGGCCTCGGCCTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKASSSAR*ASASCL Trigger: GAGGCAGGAGGCCGAGGCGCAGCGCGCGCTCGACGA...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | TCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCAGCTTTCTGTGCCTaGAGGTGGGTGACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKQEPISKPSSHTARTLSSAFCA*RWVTAS Trigger: AGAGGCAGTCACCCACCTGCAGGCACAGAAAGCTGA...GGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | GATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACCAGGACAGGGTCTCCTaGTCCCCTCAGCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DLIQTGAHLKALLPHCPDQDRVS*SPQLPS Trigger: AGAAGGAAGCTGAGGGGAGCAGGAGACCCTGTCCTG...GTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | ATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGATCCTCGGGCCCGGGCTaGTCGCCCAGGCGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IGGHLQCRQVDYDLIQTGSSGPG*SPRRWK Trigger: CTTCCAGCGCCTGGGCGAGCAGCCCGGGCCCGAGGA...TCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | AAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCCATTTTCGTATTTGCTaGGGAACTCGTCGAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: KQEPISKPSSHTARTLSSHFRIC*GTRRAR Trigger: GCGCGCTCGACGAGTTCCGCAGCAAATACGAAAATG...GGAGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGTCCTCCAGCTGGTTCTaGAGGGCAGCCACTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPSSSWF*RAATSR Trigger: ACGGGAAGTGGCTGCCCTGCAGAACCAGCTGGAGGA...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACCTGCAGGTGGGTGACTaGCTCTCGGCCCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VDYDLIQTGAHLKALLPHLQVGD*LSALLQ Trigger: CTGGAGGAGGGCCGAGAGGCAGTCACCCACCTGCAG...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | GACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCGCCGTGGTCTGGGCCTaGAGCTCAGCTTTCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: DYDLIQTGAHLKALLPHCAVVWA*SSAFCA Trigger: GGCACAGAAAGCTGAGCTGCAGGCCCAGACCACGGC...GCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTGTGAACAGCTTCTCCTaGATGAGGAGGCCAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTVNSFS*MRRPDS Trigger: GGAGTCTGGCCTCCTCATGCAGGAGAAGCTGTTCAC...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | GATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACTCCATTCTCCACAGGTaGCATGGGCTGTCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DLIQTGAHLKALLPHCPDSILHR*HGLSRR Trigger: TCTCCTGGACAGCCCATGCCACCTGTGGAGAATGGA...GTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | AAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCAACTGTGCCTCCAACTaGAGGTGCAGGTTACGCAAT | + |
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Preference number: 4 (lower is better) Translates to: KQEPISKPSSHTARTLSSNCASN*RCRLRN Trigger: ATTGCGTAACCTGCACCTTCAGTTGGAGGCACAGTT...GGAGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTTCTACGTGGCCGTCATaGTGCATAGAGTCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPSTWPS*CIESSS Trigger: TGAGGAAGACTCTATGCATCATGACGGCCACGTAGA...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | TCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCTACGTGGCCGTCATaGTGCATAGAGTCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SKQEPISKPSSHTARTLSSTWPS*CIESSS Trigger: TGAGGAAGACTCTATGCATCATGACGGCCACGTAGA...GGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | AAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCAGTGCCTTTGGCTCCTaGGGAGGTTTTAATGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KQEPISKPSSHTARTLSSSAFGS*GGFNGA Trigger: TGCACCATTAAAACCTCCGCAGGAGCCAAAGGCACT...GGAGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCTTGTTCCAGGGCCGTaGTCTGGGCCTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGHLQCRQVDYDLIQTGALVPGP*SGPAAQ Trigger: CTGAGCTGCAGGCCCAGACCACGGCCCTGGAACAAG...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCTCCTCCAGCTGGTTCTaGAGGGCAGCCACTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GGHLQCRQVDYDLIQTGASSSWF*RAATSR Trigger: ACGGGAAGTGGCTGCCCTGCAGAACCAGCTGGAGGA...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGAAGGCTTTGCTTATCTaGCCCCCGTCTGGCACATCC | + |
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Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPKALLI*PPSGTS Trigger: GGATGTGCCAGACGGGGGCCAGATAAGCAAAGCCTT...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGTCCATTCTCCACAGGTaGCATGGGCTGTCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPSILHR*HGLSRR Trigger: TCTCCTGGACAGCCCATGCCACCTGTGGAGAATGGA...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | CAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCATCACCTTCCCTGCCCTaGGGAACGCCCTGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: QVDYDLIQTGAHLKALLPSPSLP*GTPCPF Trigger: GAATGGACAGGGCGTTCCCCAGGGCAGGGAAGGTGA...TGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTGTGCCTGCAGGTGGGTaGCTGCCTCTCGGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGVPAGG*LPLGPP Trigger: AGGAGGGCCGAGAGGCAGTCACCCACCTGCAGGCAC...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGGACCCAGACGTCTGTaGATGGGATGTAGATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPGPRRL*MGCRWF Trigger: GAACCATCTACATCCCATTCACAGACGTCTGGGTCC...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGTTTCCCAAAGGCTTTaGTTATCTGGCCCCCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPVSQRL*LSGPRL Trigger: CAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAAC...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCTATCTGGCCCCCGTCTaGCACATCCTCAGGACCCCC | + |
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Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKAYLAPV*HILRTP Trigger: GGGGGTCCTGAGGATGTGCCAGACGGGGGCCAGATA...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | GACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCAAGGCTTTGCTTATCTaGCCCCCGTCTGGCACATCC | + |
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Preference number: 4 (lower is better) Translates to: DYDLIQTGAHLKALLPHCKALLI*PPSGTS Trigger: GGATGTGCCAGACGGGGGCCAGATAAGCAAAGCCTT...GCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTCCAGACGTCTGTGAATaGGATGTAGATGGTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPPDVCE*DVDGSS Trigger: TGATGAACCATCTACATCCCATTCACAGACGTCTGG...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR TCA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCCACTTCCCGTTCTGTaGACAGCTTCTCCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGHLQCRQVDYDLIQTGAPLPVL*TASPPS Trigger: TGAGGGAGGAGAAGCTGTTCACAGAACGGGAAGTGG...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028907.14 |
||
| CDS-3UTR TCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTTCTTGTTGCCCTTTaGCTTCCCAATCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTFLVAL*LPNQSL Trigger: GAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAA...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTCTGCAGGTGGGTGACTaGCTCTCGGCCCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGLQVGD*LSALLQ Trigger: CTGGAGGAGGGCCGAGAGGCAGTCACCCACCTGCAG...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTCAGCTTTCTGTGCCTaGAGGTGGGTGACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDYDLIQTGAHLKALLPHSAFCA*RWVTAS Trigger: AGAGGCAGTCACCCACCTGCAGGCACAGAAAGCTGA...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGCCGTGGTCTGGGCCTaGAGCTCAGCTTTCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTAVVWA*SSAFCA Trigger: GGCACAGAAAGCTGAGCTGCAGGCCCAGACCACGGC...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | GATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACCTCCCAGTTTCTTGTTaGCCTTTGACTTCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: DLIQTGAHLKALLPHCPDLPVSC*PLTSQS Trigger: TGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAG...GTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACATTCTGTGCCTGCAGGTaGGTGACTGCCTCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTFCACR*VTASRP Trigger: GGGCCGAGAGGCAGTCACCCACCTGCAGGCACAGAA...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAACTCGCAGGCCCCACTaGTCCACCCTGATTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTTRRPH*STLIGP Trigger: GGGTCCAATCAGGGTGGACCAGTGGGGCCTGCGAGT...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACAGATGGGCGTCTCAATaGAAACAGAGCTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VDYDLIQTGAHLKALLPHRWASQ*KQSSAC Trigger: GCAGGCTGAGCTCTGTTTTCATTGAGACGCCCATCT...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTTCCTCCACCTTATCTTaGGCTATAATCTCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPSSTLS*AIISFL Trigger: AAGAAAGGAGATTATAGCTCAAGATAAGGTGGAGGA...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACGGACCCAGACGTCTGTaGATGGGATGTAGATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VDYDLIQTGAHLKALLPHGPRRL*MGCRWF Trigger: GAACCATCTACATCCCATTCACAGACGTCTGGGTCC...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCGGCCACACTGATATCTaGCTGCAGAAACTGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGHLQCRQVDYDLIQTGAGHTDI*LQKLCL Trigger: GAGGCACAGTTTCTGCAGGCAGATATCAGTGTGGCC...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTTCTCTTTCACTACTTTaGACAGTTTCCCAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPSLSLL*TVSQRL Trigger: AAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGA...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | GATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACCCTCAGCTTCCTTCTTaGCATCATCATCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLIQTGAHLKALLPHCPDPQLPS*HHHLFP Trigger: AGGAAAAAGATGATGATGGCAAGAAGGAAGCTGAGG...GTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTTCTGTGCCTGCAGGTaGGTGACTGCCTCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGFCACR*VTASRP Trigger: GGGCCGAGAGGCAGTCACCCACCTGCAGGCACAGAA...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTACTCGCAGGCCCCACTaGTCCACCCTGATTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGTRRPH*STLIGP Trigger: GGGTCCAATCAGGGTGGACCAGTGGGGCCTGCGAGT...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTGAAATCTTCTCAATaGATTCCACCACCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTLKSSQ*IPPPPP Trigger: AGGTGGAGGTGGTGGAATCCATTGAGAAGATTTCAA...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACAACTGTGCCTCCAACTaGAGGTGCAGGTTACGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VDYDLIQTGAHLKALLPHNCASN*RCRLRN Trigger: ATTGCGTAACCTGCACCTTCAGTTGGAGGCACAGTT...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAACCCTGCTGATGGTTTaGGTGGTCACCTTCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTTLLMV*VVTFPA Trigger: GGCAGGGAAGGTGACCACTCAAACCATCAGCAGGGT...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCATCAGGACCAGGTATaGTCACAGGACAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKAHQDQV*SQDRVS Trigger: GGAGACCCTGTCCTGTGATCATACCTGGTCCTGATG...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTCCCACTGGTCCACCCTaGTTGGACCCAGACGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGPTGPP*LDPDVC Trigger: ACAGACGTCTGGGTCCAATCAGGGTGGACCAGTGGG...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTCTCTTTCACTACTTTaGACAGTTTCCCAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIQTGAHLKALLPHCPDTSLSLL*TVSQRL Trigger: AAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGA...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGCCAGACGTCTGTGAATaGGATGTAGATGGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPPDVCE*DVDGSS Trigger: TGATGAACCATCTACATCCCATTCACAGACGTCTGG...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGTGCCTTCAATCTCAATaGTCCGATGATAACGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPCLQSQ*SDDNGL Trigger: TAGACCGTTATCATCGGATCATTGAGATTGAAGGCA...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACACATCAGGACCAGGTATaGTCACAGGACAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTHQDQV*SQDRVS Trigger: GGAGACCCTGTCCTGTGATCATACCTGGTCCTGATG...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | CAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCAACACTGATATCTGCCTaGAGAAACTGTGCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVDYDLIQTGAHLKALLPTLISA*RNCASN Trigger: GTTGGAGGCACAGTTTCTGCAGGCAGATATCAGTGT...TGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCGGCCACACTGATATCTaGCTGCAGAAACTGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKAGHTDI*LQKLCL Trigger: GAGGCACAGTTTCTGCAGGCAGATATCAGTGTGGCC...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTCAGCTCAGCTTTCTGTaGCTGCAGGTGGGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGQLSFL*LQVGDC Trigger: GCAGTCACCCACCTGCAGGCACAGAAAGCTGAGCTG...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCGTTTCCCAAAGGCTTTaGTTATCTGGCCCCCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKAVSQRL*LSGPRL Trigger: CAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAAC...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGCCTCAGCTTCCTTCTTaGCATCATCATCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPPQLPS*HHHLFP Trigger: AGGAAAAAGATGATGATGGCAAGAAGGAAGCTGAGG...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGTTGAAATCTTCTCAATaGATTCCACCACCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YDLIQTGAHLKALLPHCPLKSSQ*IPPPPP Trigger: AGGTGGAGGTGGTGGAATCCATTGAGAAGATTTCAA...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCTGTCCTTGGCCACACTaGTATCTGCCTGCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKACPWPH*YLPAET Trigger: AGTTTCTGCAGGCAGATATCAGTGTGGCCAAGGACA...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCATTTCTTGTTGCCCTTTaGCTTCCCAATCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVDYDLIQTGAHLKALLPFLVAL*LPNQSL Trigger: GAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAA...TGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACACATTTTCGTATTTGCTaGGGAACTCGTCGAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTHFRIC*GTRRAR Trigger: GCGCGCTCGACGAGTTCCGCAGCAAATACGAAAATG...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTAGATGGGCGTCTCAATaGAAACAGAGCTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KESSLMKVIGGHLQCRQVRWASQ*KQSSAC Trigger: GCAGGCTGAGCTCTGTTTTCATTGAGACGCCCATCT...AACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTGCCTGCAGAAACTGTaGCTCCAACTGAAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGCLQKL*LQLKVQ Trigger: CTGCACCTTCAGTTGGAGGCACAGTTTCTGCAGGCA...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTTGCCTGCAGAAACTGTaGCTCCAACTGAAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KESSLMKVIGGHLQCRQVCLQKL*LQLKVQ Trigger: CTGCACCTTCAGTTGGAGGCACAGTTTCTGCAGGCA...AACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTTTTTGGAAGGCTCTTaGGGAGGGCCTTCTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGFLEGS*GGPSVS Trigger: CGAGACAGAAGGCCCTCCCCAAGAGCCTTCCAAAAA...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCAATCTCCTTTCTTTTTaGAAGGCTCTTGGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKANLLSF*KALGEG Trigger: GCCCTCCCCAAGAGCCTTCCAAAAAGAAAGGAGATT...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTTGTCCTTGGCCACACTaGTATCTGCCTGCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KESSLMKVIGGHLQCRQVCPWPH*YLPAET Trigger: AGTTTCTGCAGGCAGATATCAGTGTGGCCAAGGACA...AACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTAGTGCCTTTGGCTCCTaGGGAGGTTTTAATGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KESSLMKVIGGHLQCRQVSAFGS*GGFNGA Trigger: TGCACCATTAAAACCTCCGCAGGAGCCAAAGGCACT...AACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CCA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAAATCTCCTTTCTTTTTaGAAGGCTCTTGGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTNLLSF*KALGEG Trigger: GCCCTCCCCAAGAGCCTTCCAAAAAGAAAGGAGATT...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCTGCCTTCAATCTCAATaGTCCGATGATAACGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QCRQVDYDLIQTGAHLKACLQSQ*SDDNGL Trigger: TAGACCGTTATCATCGGATCATTGAGATTGAAGGCA...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTACACTGATATCTGCCTaGAGAAACTGTGCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGTLISA*RNCASN Trigger: GTTGGAGGCACAGTTTCTGCAGGCAGATATCAGTGT...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR GCA 90 bp | ATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGACTCCCAGTTTCTTGTTaGCCTTTGACTTCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: IGGHLQCRQVDYDLIQTGLPVSC*PLTSQS Trigger: TGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAG...TCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTCCTCCACCTTATCTTaGGCTATAATCTCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGSSTLS*AIISFL Trigger: AAGAAAGGAGATTATAGCTCAAGATAAGGTGGAGGA...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | AGGCGCTGGAAGGCGTCGAGCTGCCGCCGCAGGCCGGCGTGGCGCTaGTGGAGCGCGCGGGCCCGCTGGACCTGGACTGCCACGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRWKASSCRRRPAWR*WSARARWTWTATRS Trigger: CGAGCGCGTGGCAGTCCAGGTCCAGCGGGCCCGCGCGCTCCAGCAGCGCCACGCCGGCCTGCGGCGGCAGCTCGACGCCTTCCAGCGCCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | AGATTGGCCTCGACGTGGCGGGCGAGCGCGTCCTCGGGCCCGGGCTaGTCGCCCAGGCGCTGGAAGGCGTCGAGCTGCCGCCGCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLASTWRASASSGPG*SPRRWKASSCRRRP Trigger: CGGCCTGCGGCGGCAGCTCGACGCCTTCCAGCGCCTGGGCGAGCAGCCCGGGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 90 bp | TGCTCGGCTGTCAGGTCCCGGGCGCGCTGCAGATTGGCCTCGACGTaGCGGGCGAGCGCGTCCTCGGGCCCGGGCTGCTCGCCCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSAVRSRARCRLAST*RASASSGPGCSPRR Trigger: GCGCCTGGGCGAGCAGCCCGGGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 90 bp | CGAGCCGCGCGTGCTCGGCTGTCAGGTCCCGGGCGCGCTGCAGATTaGCCTCGACGTGGCGGGCGAGCGCGTCCTCGGGCCCGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAARARLSGPGRAAD*PRRGGRARPRARAA Trigger: AGCAGCCCGGGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCACGCGCGGCTCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | TGCCTCTCGAGCCGCGCGTGCTCGGCTGTCAGGTCCCGGGCGCGCTaGAGATTGGCCTCGACGTGGCGGGCGAGCGCGTCCTCGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CLSSRACSAVRSRAR*RLASTWRASASSGP Trigger: CGGGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCACGCGCGGCTCGAGAGGCA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | TATTTGCTGCGGAACTCGTCGAGCGCGCGCTGCGCCTCGGCCTCCTaGCTCTCGAGCCGCGCGTGCTCGGCTGTCAGGTCCCGGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: YLLRNSSSARCASAS*LSSRACSAVRSRAR Trigger: GCGCGCCCGGGACCTGACAGCCGAGCACGCGCGGCTCGAGAGGCAGGAGGCCGAGGCGCAGCGCGCGCTCGACGAGTTCCGCAGCAAATA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 90 bp | GTCACCTTCCCTGCCCTGGGGAACGCCCTGTCCATTCTCCACAGGTaGCATGGGCTGTCCAGGAGAGGGCTCTACGTGGCCGTCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VTFPALGNALSILHR*HGLSRRGLYVAVMM Trigger: CATCATGACGGCCACGTAGAGCCCTCTCCTGGACAGCCCATGCCACCTGTGGAGAATGGACAGGGCGTTCCCCAGGGCAGGGAAGGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | TCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCCCTTCGAAGGGCCCTTaGCCAGCAGGCTACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKQEPISKPSSHTARTLSPSKGP*PAGYCS Trigger: AGAGCAGTAGCCTGCTGGCAAAGGGCCCTTCGAAGG...GGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | CATTCTTGTCTGTACCCTGCTGATGGTTTGAGTGGTCACCTTCCCTaGCCTGGGGAACGCCCTGTCCATTCTCCACAGGTGGCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSCLYPADGLSGHLP*PGERPVHSPQVAWA Trigger: AGCCCATGCCACCTGTGGAGAATGGACAGGGCGTTCCCCAGGGCAGGGAAGGTGACCACTCAAACCATCAGCAGGGTACAGACAAGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS TCA 90 bp | GCCAGCAGGCTACTGCTCTTACTCGCAGGCCCCACTGGTCCACCCTaGTTGGACCCAGACGTCTGTGAATGGGATGTAGATGGTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ASRLLLLLAGPTGPP*LDPDVCEWDVDGSS Trigger: TGATGAACCATCTACATCCCATTCACAGACGTCTGGGTCCAATCAGGGTGGACCAGTGGGGCCTGCGAGTAAGAGCAGTAGCCTGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 90 bp | ACAGGTGGCATGGGCTGTCCAGGAGAGGGCTCTACGTGGCCGTCATaGTGCATAGAGTCTTCCTCAATGGAAATCACCACCCCACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGGMGCPGEGSTWPS*CIESSSMEITTPPL Trigger: TAGAGGTGGGGTGGTGATTTCCATTGAGGAAGACTCTATGCATCATGACGGCCACGTAGAGCCCTCTCCTGGACAGCCCATGCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS GCA 90 bp | CAGGCTCGGGCTCTTTGTGGCCGCTCACTCTCTCTTTCACTACTTTaGACAGTTTCCCAAAGGCTTTGCTTATCTGGCCCCCGTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QARALCGRSLSLSLL*TVSQRLCLSGPRLA Trigger: TGCCAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGGCCACAAAGAGCCCGAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 90 bp | CCTTTGGTGAAAAGGTCCGTGGGCGGCTCAGGCTCGGGCTCTTTGTaGCCGCTCACTCTCTCTTTCACTACTTTGCACAGTTTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLVKRSVGGSGSGSL*PLTLSFTTLHSFPK Trigger: CTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGGCCACAAAGAGCCCGAGCCTGAGCCGCCCACGGACCTTTTCACCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | GAGCCACCTTCTGCTTTCCGTTCCACCTGCAGTGCCTTTGGCTCCTaGGGAGGTTTTAATGGTGCATCTTCCAGAGTTTCCTCCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EPPSAFRSTCSAFGS*GGFNGASSRVSSTL Trigger: TAAGGTGGAGGAAACTCTGGAAGATGCACCATTAAAACCTCCGCAGGAGCCAAAGGCACTGCAGGTGGAACGGAAAGCAGAAGGTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 90 bp | CGCTCACTCTCTCTTTCACTACTTTGCACAGTTTCCCAAAGGCTTTaGTTATCTGGCCCCCGTCTGGCACATCCTCAGGACCCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSLSLLCTVSQRL*LSGPRLAHPQDPLL Trigger: AAGAAGGGGGTCCTGAGGATGTGCCAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCTCAGGACCCCCTTCTaGTGTGGGACTTACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: DYDLIQTGAHLKALLPHCLRTPF*CGTYSM Trigger: CATGGAGTAAGTCCCACACAAGAAGGGGGTCCTGAG...GCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | TCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCGTTTCTTGTTGCCCTTaGACTTCCCAATCAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKQEPISKPSSHTARTLSVSCCP*TSQSES Trigger: AGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAAC...GGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | CTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCTCTCCCAGTTTCTaGTTGCCCTTTGACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIQTGAHLKALLPHCPDTFSPSF*LPFDFP Trigger: TGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAA...AGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCTCAGGACCCCCTTCTaGTGTGGGACTTACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGHLQCRQVDYDLIQTGALRTPF*CGTYSM Trigger: CATGGAGTAAGTCCCACACAAGAAGGGGGTCCTGAG...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 90 bp | CCAGGGACACTTGAGGAGCAGTCTGTACGATCTGCTGCAGGACGGTaGTGTAGGTCTGAATCTCCAGAAGATTCTTCTTGTACCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGTLEEQSVRSAAGR*CRSESPEDSSCTCP Trigger: AGGACAGGTACAAGAAGAATCTTCTGGAGATTCAGACCTACATCACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAGTGTCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGTCCAGAAGATTCTTCTaGTACCTGTCCTTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: YDLIQTGAHLKALLPHCPSRRFF*YLSLAT Trigger: TGTGGCCAAGGACAGGTACAAGAAGAATCTTCTGGA...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | CCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGGACACTTTCCTTTCCTCCACCTTATCTaGAGCTATAATCTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PNRSPSQSPPPTLPGHFPFLHLI*SYNLLS Trigger: AGAAAGGAGATTATAGCTCAAGATAAGGTGGAGGAA...AGGAAAGTGTCCGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACAGTTTCCCAAAGGCTTaGCTTATCTGGCCCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDYDLIQTGAHLKALLPHSFPKA*LIWPPS Trigger: AGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACT...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACACCTTCGAAGGGCCCTTaGCCAGCAGGCTACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTPSKGP*PAGYCS Trigger: AGAGCAGTAGCCTGCTGGCAAAGGGCCCTTCGAAGG...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCTTCTTGTACCTGTCCTaGGCCACACTGATATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGHLQCRQVDYDLIQTGAFLYLS*ATLISA Trigger: GGCAGATATCAGTGTGGCCAAGGACAGGTACAAGAA...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACACCACCTGCAGTGCCTTaGGCTCCTGCGGAGGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTPPAVP*APAEVL Trigger: TAAAACCTCCGCAGGAGCCAAAGGCACTGCAGGTGG...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | TATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTGCCCGCTCTCTTTCACTACTTaGCACAGTTTCCCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YDLIQTGAHLKALLPHCPLSFTT*HSFPKA Trigger: AGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAG...CGGGCAGTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACTCCAGAAGATTCTTCTaGTACCTGTCCTTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VDYDLIQTGAHLKALLPHSRRFF*YLSLAT Trigger: TGTGGCCAAGGACAGGTACAAGAAGAATCTTCTGGA...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACACTTTTTGGAAGGCTCTaGGGGAGGGCCTTCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTLFGRL*GRAFCL Trigger: GAGACAGAAGGCCCTCCCCAAGAGCCTTCCAAAAAG...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCAGTTTCCCAAAGGCTTaGCTTATCTGGCCCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QCRQVDYDLIQTGAHLKASFPKA*LIWPPS Trigger: AGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACT...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCTTCTCTCCCAGTTTCTaGTTGCCCTTTGACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGHLQCRQVDYDLIQTGAFSPSF*LPFDFP Trigger: TGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAA...GGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 90 bp | TCGGCTTCCTTGTTAAGCCGTTCCAGCATTTCCTTTAGCACCAACTaGCATTCACACTCATTTTCGTATTTGCTGCGGAACTCGTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SASLLSRSSISFSTN*HSHSFSYLLRNSSS Trigger: GCTCGACGAGTTCCGCAGCAAATACGAAAATGAGTGTGAATGTCAGTTGGTGCTAAAGGAAATGCTGGAACGGCTTAACAAGGAAGCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | AAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTCTTTTTGGAAGGCTCTaGGGGAGGGCCTTCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KESSLMKVIGGHLQCRQVLFGRL*GRAFCL Trigger: GAGACAGAAGGCCCTCCCCAAGAGCCTTCCAAAAAG...AACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | GTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCCTCCCACACGTTTCTTGTTGCCCTTaGACTTCCCAATCAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDYDLIQTGAHLKALLPHVSCCP*TSQSES Trigger: AGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAAC...GTGTGGGAGGAGGGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS TCA 90 bp | CCTTGTGTCTGGCAAGCTCTTCTCTCCCAGTTTCTTGTTGCCCTTTaGCTTCCCAATCAGAGTCTCCACAATTACGGAAGTCTCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: PCVWQALLSQFLVAL*LPNQSLHNYGSLFI Trigger: TATGAAGAGACTTCCGTAATTGTGGAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAAGAGCTTGCCAGACACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACATTCTTGTACCTGTCCTaGGCCACACTGATATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTFLYLS*ATLISA Trigger: GGCAGATATCAGTGTGGCCAAGGACAGGTACAAGAA...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | ATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAAGTAACCAGGGACACTaGAGGAGCAGTCTGTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: IGGHLQCRQVDYDLIQTGSNQGH*RSSLYD Trigger: ATCGTACAGACTGCTCCTCAAGTGTCCCTGGTTACT...TCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | CAATGCAGACAGGTTGACTATGATCTAATCCAAACAGGAGCCCATCTCAAAGCCCTCTCTTTCACTACTTaGCACAGTTTCCCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QCRQVDYDLIQTGAHLKALSFTT*HSFPKA Trigger: AGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAG...GGCTTTGAGATGGGCTCCTGTTTGGATTAGATCATAGTCAACCTGTCTGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACATCTCCCAGTTTCTTGTaGCCCTTTGACTTCCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTSPSFL*PFDFPI Trigger: GATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGA...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAAGCAGTTTAATGAAGGTCATTGGAGGTCACCTGCAATGCAGACAGGTTCTCCCAGTTTCTTGTaGCCCTTTGACTTCCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: KRKQFNEGHWRSPAMQTGSPSFL*PFDFPI Trigger: GATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGA...ACCTGTCTGCATTGCAGGTGACCTCCAATGACCTTCATTAAACTGCTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
||
| CDS TCA 90 bp | TTCCCAATCAGAGTCTCCACAATTACGGAAGTCTCTTCATATGTCTaGATACTCTCTGTTGAAATCTTCTCAATGGATTCCACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPIRVSTITEVSSYV*ILSVEIFSMDSTTS Trigger: GGAGGTGGTGGAATCCATTGAGAAGATTTCAACAGAGAGTATTCAGACATATGAAGAGACTTCCGTAATTGTGGAGACTCTGATTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS-3UTR CAA 90 bp | GTCATTGGAGGTCACCTGCAATGCAGACAGGTTGACTATGATCTAATCCAAACATTCCTCCACCTTATCTaGAGCTATAATCTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VIGGHLQCRQVDYDLIQTFLHLI*SYNLLS Trigger: AGAAAGGAGATTATAGCTCAAGATAAGGTGGAGGAA...TGTTTGGATTAGATCATAGTCAACCTGTCTGCATTGCAGGTGACCTCCAATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | AAGGCGTCGAGCTGCCGCCGCAGGCCGGCGTGGCGCTaGTGGAGCGCGCGGGCCCGCTGGACCTGGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KASSCRRRPAWR*WSARARWTWTA Trigger: GGCAGTCCAGGTCCAGCGGGCCCGCGCGCTCCAGCAGCGCCACGCCGGCCTGCGGCGGCAGCTCGACGCCTT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | TCGACGTGGCGGGCGAGCGCGTCCTCGGGCCCGGGCTaGTCGCCCAGGCGCTGGAAGGCGTCGAGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: STWRASASSGPG*SPRRWKASSCR Trigger: GCGGCAGCTCGACGCCTTCCAGCGCCTGGGCGAGCAGCCCGGGCCCGAGGACGCGCTCGCCCGCCACGTCGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 90 bp | TCGAGCCGCGCGTGCTCGGCTGTCAGGTCCCGGGCGCGCTGCAGATaGGCCTCGACGTGGCGGGCGAGCGCGTCCTCGGGCCCGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRACSAVRSRARCR*ASTWRASASSGPGC Trigger: GCAGCCCGGGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCACGCGCGGCTCGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 72 bp | GTCAGGTCCCGGGCGCGCTGCAGATTGGCCTCGACGTaGCGGGCGAGCGCGTCCTCGGGCCCGGGCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VRSRARCRLAST*RASASSGPGCS Trigger: CGAGCAGCCCGGGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | AGCCGCGCGTGCTCGGCTGTCAGGTCCCGGGCGCGCTaGAGATTGGCCTCGACGTGGCGGGCGAGCGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRACSAVRSRAR*RLASTWRASAS Trigger: GGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCACGCGCGGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 72 bp | CGTGCTCGGCTGTCAGGTCCCGGGCGCGCTGCAGATTaGCCTCGACGTGGCGGGCGAGCGCGTCCTCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RARLSGPGRAAD*PRRGGRARPRA Trigger: GGCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCACG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | GCGTGCTCGGCTGTCAGGTCCCGGGCGCGCTGCAGATaGGCCTCGACGTGGCGGGCGAGCGCGTCCTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ACSAVRSRARCR*ASTWRASASSG Trigger: GCCCGAGGACGCGCTCGCCCGCCACGTCGAGGCCAATCTGCAGCGCGCCCGGGACCTGACAGCCGAGCACGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 72 bp | CCTGCCCTGGGGAACGCCCTGTCCATTCTCCACAGGTaGCATGGGCTGTCCAGGAGAGGGCTCTACGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PALGNALSILHR*HGLSRRGLYVA Trigger: GGCCACGTAGAGCCCTCTCCTGGACAGCCCATGCCACCTGTGGAGAATGGACAGGGCGTTCCCCAGGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | ATGTCCTCCCCCTGCTCCGGGCTGAGAGCCACCTTCTaGTTTCCGTTCCACCTGCAGTGCCTTTGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MSSPCSGLRATF*FPFHLQCLWLL Trigger: CAGGAGCCAAAGGCACTGCAGGTGGAACGGAAAGCAGAAGGTGGCTCTCAGCCCGGAGCAGGGGGAGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 72 bp | GTGGGACTTACTCCATGTCCTCCCCCTGCTCCGGGCTaGGAGCCACCTTCTGCTTTCCGTTCCACCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VGLTPCPPPAPG*EPPSAFRSTCS Trigger: ACTGCAGGTGGAACGGAAAGCAGAAGGTGGCTCTCAGCCCGGAGCAGGGGGAGGACATGGAGTAAGTCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | ACAGAGCCTTCGAAGGGCCCTTTGCCAGCAGGCTACTaGTCTTACTCGCAGGCCCCACTGGTCCACCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TEPSKGPLPAGY*SYSQAPLVHPD Trigger: ATCAGGGTGGACCAGTGGGGCCTGCGAGTAAGAGCAGTAGCCTGCTGGCAAAGGGCCCTTCGAAGGCTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | CTGTACCCTGCTGATGGTTTGAGTGGTCACCTTCCCTaGCCTGGGGAACGCCCTGTCCATTCTCCACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LYPADGLSGHLP*PGERPVHSPQV Trigger: CACCTGTGGAGAATGGACAGGGCGTTCCCCAGGGCAGGGAAGGTGACCACTCAAACCATCAGCAGGGTACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | AAACTAGACTCCCCTGTGACGAGTACATGCCGTCCTTaGGTGAAAAGGTCCGTGGGCGGCTCAGGCTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KLDSPVTSTCRP*VKRSVGGSGSG Trigger: GCCCGAGCCTGAGCCGCCCACGGACCTTTTCACCAAAGGACGGCATGTACTCGTCACAGGGGAGTCTAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 72 bp | AGGCCAGACTCCCTCATCCCAGTAACCAGGGACACTTaGGGAGCAGTCTGTACGATCTGCTGCAGGACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPDSLIPVTRDT*GAVCTICCRTV Trigger: CACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAGTGTCCCTGGTTACTGGGATGAGGGAGTCTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099296.4 |
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| CDS GCA 72 bp | GCACCAACTGACATTCACACTCATTTTCGTATTTGCTaGGGAACTCGTCGAGCGCGCGCTGCGCCTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: APTDIHTHFRIC*GTRRARAAPRP Trigger: AGGCCGAGGCGCAGCGCGCGCTCGACGAGTTCCGCAGCAAATACGAAAATGAGTGTGAATGTCAGTTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | GAGGCCAGACTCCCTCATCCCAGTAACCAGGGACACTaGAGGAGCAGTCTGTACGATCTGCTGCAGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: EARLPHPSNQGH*RSSLYDLLQDG Trigger: ACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAGTGTCCCTGGTTACTGGGATGAGGGAGTCTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099296.4 |
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| CDS CAA 90 bp | CTGCATGAGGAGGCCAGACTCCCTCATCCCAGTAACCAGGGACACTaGAGGAGCAGTCTGTACGATCTGCTGCAGGACGGTGATGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHEEARLPHPSNQGH*RSSLYDLLQDGDVG Trigger: ACCTACATCACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAGTGTCCCTGGTTACTGGGATGAGGGAGTCTGGCCTCCTCATGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099296.4 |
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| CDS TCA 72 bp | AGCTTCTCCTCCCTCATCCCAGTAACCAGGGACACTTaGGGAGCAGTCTGTACGATCTGCTGCAGGACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSSLIPVTRDT*GAVCTICCRTV Trigger: CACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAGTGTCCCTGGTTACTGGGATGAGGGAGGAGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028907.14 |
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| CDS TCA 72 bp | TCCTTGGCCCGTAACCCATTCTTGTCTGTACCCTGCTaGTGGTTTGAGTGGTCACCTTCCCTGCCCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLARNPFLSVPC*WFEWSPSLPWG Trigger: TCCCCAGGGCAGGGAAGGTGACCACTCAAACCATCAGCAGGGTACAGACAAGAATGGGTTACGGGCCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | CACCTTCTTAATAGACAGAGCCTTCGAAGGGCCCTTTaGCAGCAGGCTACTGCTCTTACTCGCAGGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HLLNRQSLRRAL*QQATALTRRPH Trigger: GTGGGGCCTGCGAGTAAGAGCAGTAGCCTGCTGGCAAAGGGCCCTTCGAAGGCTCTGTCTATTAAGAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CCA 72 bp | AAAAGGTCCGTGGGCGGCTCAGGCTCGGGCTCTTTGTaGCCGCTCACTCTCTCTTTCACTACTTTGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRSVGGSGSGSL*PLTLSFTTLHS Trigger: ACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGGCCACAAAGAGCCCGAGCCTGAGCCGCCCACGGACCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 90 bp | CGGGCTGAGAGCCACCTTCTGCTTTCCGTTCCACCTGCAGTGCCTTaGGCTCCTGCGGAGGTTTTAATGGTGCATCTTCCAGAGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAESHLLLSVPPAVP*APAEVLMVHLPEFP Trigger: AGGAAACTCTGGAAGATGCACCATTAAAACCTCCGCAGGAGCCAAAGGCACTGCAGGTGGAACGGAAAGCAGAAGGTGGCTCTCAGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 90 bp | TCAGGCTCGGGCTCTTTGTGGCCGCTCACTCTCTCTTTCACTACTTaGCACAGTTTCCCAAAGGCTTTGCTTATCTGGCCCCCGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSGSLWPLTLSFTT*HSFPKALLIWPPSG Trigger: GCCAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGGCCACAAAGAGCCCGAGCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 72 bp | CTACTGCTCTTACTCGCAGGCCCCACTGGTCCACCCTaGTTGGACCCAGACGTCTGTGAATGGGATGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLAGPTGPP*LDPDVCEWDVD Trigger: ATCTACATCCCATTCACAGACGTCTGGGTCCAATCAGGGTGGACCAGTGGGGCCTGCGAGTAAGAGCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | TTAGCACCAACTGACATTCACACTCATTTTCGTATTTaGTGCGGAACTCGTCGAGCGCGCGCTGCGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPTDIHTHFRI*CGTRRARAAPR Trigger: CCGAGGCGCAGCGCGCGCTCGACGAGTTCCGCAGCAAATACGAAAATGAGTGTGAATGTCAGTTGGTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 90 bp | CCGCTCACTCTCTCTTTCACTACTTTGCACAGTTTCCCAAAGGCTTaGCTTATCTGGCCCCCGTCTGGCACATCCTCAGGACCCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTLSFTTLHSFPKA*LIWPPSGTSSGPPS Trigger: AGAAGGGGGTCCTGAGGATGTGCCAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 72 bp | ATGGGCTGTCCAGGAGAGGGCTCTACGTGGCCGTCATaGTGCATAGAGTCTTCCTCAATGGAAATCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: MGCPGEGSTWPS*CIESSSMEITT Trigger: GGTGGTGATTTCCATTGAGGAAGACTCTATGCATCATGACGGCCACGTAGAGCCCTCTCCTGGACAGCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | AGCCACCTTCTGCTTTCCGTTCCACCTGCAGTGCCTTaGGCTCCTGCGGAGGTTTTAATGGTGCATCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHLLLSVPPAVP*APAEVLMVHLP Trigger: TGGAAGATGCACCATTAAAACCTCCGCAGGAGCCAAAGGCACTGCAGGTGGAACGGAAAGCAGAAGGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 90 bp | TTCTGTGAACAGCTTCTCCTCCCTCATCCCAGTAACCAGGGACACTaGAGGAGCAGTCTGTACGATCTGCTGCAGGACGGTGATGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FCEQLLLPHPSNQGH*RSSLYDLLQDGDVG Trigger: ACCTACATCACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAGTGTCCCTGGTTACTGGGATGAGGGAGGAGAAGCTGTTCACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028907.14 |
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| CDS GCA 72 bp | AGGGCCTTCTGTCTCGGTTTAGCTGCTGTAATATCCTaGACGGCCCTGGCAAGATCTTTCACACTGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RAFCLGLAAVIS*TALARSFTLDP Trigger: TGGATCCAGTGTGAAAGATCTTGCCAGGGCCGTGCAGGATATTACAGCAGCTAAACCGAGACAGAAGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | TCTGCTTTCCGTTCCACCTGCAGTGCCTTTGGCTCCTaGGGAGGTTTTAATGGTGCATCTTCCAGAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAFRSTCSAFGS*GGFNGASSRVS Trigger: GGAAACTCTGGAAGATGCACCATTAAAACCTCCGCAGGAGCCAAAGGCACTGCAGGTGGAACGGAAAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | TCTCTTTCACTACTTTGCACAGTTTCCCAAAGGCTTTaGTTATCTGGCCCCCGTCTGGCACATCCTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLLCTVSQRL*LSGPRLAHPQD Trigger: GTCCTGAGGATGTGCCAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | GCTCTTTGTGGCCGCTCACTCTCTCTTTCACTACTTTaGACAGTTTCCCAAAGGCTTTGCTTATCTGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALCGRSLSLSLL*TVSQRLCLSGP Trigger: GGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGGCCACAAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | CTCTCTTTCACTACTTTGCACAGTTTCCCAAAGGCTTaGCTTATCTGGCCCCCGTCTGGCACATCCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSFTTLHSFPKA*LIWPPSGTSSG Trigger: TCCTGAGGATGTGCCAGACGGGGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | GGCTCTTTGTGGCCGCTCACTCTCTCTTTCACTACTTaGCACAGTTTCCCAAAGGCTTTGCTTATCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSLWPLTLSFTT*HSFPKALLIWP Trigger: GGGCCAGATAAGCAAAGCCTTTGGGAAACTGTGCAAAGTAGTGAAAGAGAGAGTGAGCGGCCACAAAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | GCCCTTGTGTCTGGCAAGCTCTTCTCTCCCAGTTTCTaGTTGCCCTTTGACTTCCCAATCAGAGTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ALVSGKLFSPSF*LPFDFPIRVST Trigger: TGTGGAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAAGAGCTTGCCAGACACAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 72 bp | CTTGAGGAGCAGTCTGTACGATCTGCTGCAGGACGGTaGTGTAGGTCTGAATCTCCAGAAGATTCTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LEEQSVRSAAGR*CRSESPEDSSC Trigger: ACAAGAAGAATCTTCTGGAGATTCAGACCTACATCACCGTCCTGCAGCAGATCGTACAGACTGCTCCTCAAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 72 bp | CTGGCAAGCTCTTCTCTCCCAGTTTCTTGTTGCCCTTaGACTTCCCAATCAGAGTCTCCACAATTACGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LASSSLPVSCCP*TSQSESPQLRK Trigger: CTTCCGTAATTGTGGAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAAGAGCTTGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS CAA 90 bp | CCCTTGTGTCTGGCAAGCTCTTCTCTCCCAGTTTCTTGTTGCCCTTaGACTTCCCAATCAGAGTCTCCACAATTACGGAAGTCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLCLASSSLPVSCCP*TSQSESPQLRKSLH Trigger: ATGAAGAGACTTCCGTAATTGTGGAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAAGAGCTTGCCAGACACAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS GCA 72 bp | TTGTGTCTGGCAAGCTCTTCTCTCCCAGTTTCTTGTTaGCCTTTGACTTCCCAATCAGAGTCTCCACAATTA | + |
|
Preference number: 6 (lower is better) Translates to: LCLASSSLPVSC*PLTSQSESPQL Trigger: TAATTGTGGAGACTCTGATTGGGAAGTCAAAGGGCAACAAGAAACTGGGAGAGAAGAGCTTGCCAGACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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| CDS TCA 72 bp | TTGTTAAGCCGTTCCAGCATTTCCTTTAGCACCAACTaGCATTCACACTCATTTTCGTATTTGCTGCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLSRSSISFSTN*HSHSFSYLLRN Trigger: GTTCCGCAGCAAATACGAAAATGAGTGTGAATGTCAGTTGGTGCTAAAGGAAATGCTGGAACGGCTTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028907.14 ENSMUST00000099296.4 |
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