Pregenerated sensors for BFAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022684Ensembl transcript IDs: ENSMUST00000023365.13, ENSMUST00000069281.8, ENSMUST00000127973.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCAGCTGGCATGGTGCCAGAGTCAGAGGAAGAGGGACCTGGTTaGAGCCTTGACACACAGAAGCAGCACCTCGCATTACCAGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: QSAGMVPESEEEGPG*SLDTQKQHLALPGV Trigger: TACCCCTGGTAATGCGAGGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCCAGCTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR TCA 90 bp | CCCAGGCAAACTCCGCGATCAGCTGGTACGGAAGAAAGGAGTACTTaGCGAGGAATTCTCTCCACTGCTTCCACGTGGGCTCCCTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PRQTPRSAGTEERST*RGILSTASTWAPSG Trigger: ACCTGAGGGAGCCCACGTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGATCGCGGAGTTTGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR TCA 90 bp | TGGCATGGTGCCAGAGTCAGAGGAAGAGGGACCTGGTTGAAGCCTTaGCACACAGAAGCAGCACCTCGCATTACCAGGGGTAGAAACGAG | + |
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Preference number: 1 (lower is better) Translates to: WHGARVRGRGTWLKP*HTEAAPRITRGRNE Trigger: CTCGTTTCTACCCCTGGTAATGCGAGGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR GCA 90 bp | AGGTCCAGAAGCTTGGTGAAAATGTCCTCGCCAGAGCTGTTTTCCTaGAGAGGGCAGATGGTGTGGATGAAGGGTAGGAAGCAGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: RSRSLVKMSSPELFS*RGQMVWMKGRKQSV Trigger: CACAGACTGCTTCCTACCCTTCATCCACACCATCTGCCCTCTGCAGGAAAACAGCTCTGGCGAGGACATTTTCACCAAGCTTCTGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR TCA 90 bp | TCCTCCAAAAAGAGAACAACTCCAGAACAGAGAGCAGCACGGCATTaGCGATCAGGAAGCGAGATGTCCAGTAGTGGACCTCCAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SSKKRTTPEQRAARH*RSGSEMSSSGPPAS Trigger: ACTGGCTGGAGGTCCACTACTGGACATCTCGCTTCCTGATCGTCAATGCCGTGCTGCTCTCTGTTCTGGAGTTGTTCTCTTTTTGGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR TCA 90 bp | TGTCCTCGCCAGAGCTGTTTTCCTGCAGAGGGCAGATGGTGTGGATaGAGGGTAGGAAGCAGTCTGTGTAGTCAAACAGGTACAGGTATA | + |
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Preference number: 1 (lower is better) Translates to: CPRQSCFPAEGRWCG*RVGSSLCSQTGTGI Trigger: TATACCTGTACCTGTTTGACTACACAGACTGCTTCCTACCCTTCATCCACACCATCTGCCCTCTGCAGGAAAACAGCTCTGGCGAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR CCA 90 bp | GCTTTCCTAAATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTaGTTTGGGAGTATGTCAGTTAGTGAGGTTAGGGCTACTGACCAT | + |
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Preference number: 1 (lower is better) Translates to: AFLNLTHGTDLAQEA*FGSMSVSEVRATDH Trigger: ATGGTCAGTAGCCCTAACCTCACTAACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTTAGGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR TCA 90 bp | AAAGGGACCATCGTCATTGGTATTTCCTTACCAACCATCTACCACTaGAAGGCACTTACTTCAGCTCACTTCTCGACCAGATCCTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: KGTIVIGISLPTIYH*KALTSAHFSTRSSK Trigger: TTTGGAGGATCTGGTCGAGAAGTGAGCTGAAGTAAGTGCCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGATGGTCCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR CCA 90 bp | CATATCTATGACAAAACCTATCCTTGCTTTCCTAAATTTGACTCATaGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: HIYDKTYPCFPKFDS*DRPGPRSLVWEYVS Trigger: ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTTAGGAAAGCAAGGATAGGTTTTGTCATAGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR GCA 90 bp | TATTTTGTATGTCCAACTATCCATATCTATGACAAAACCTATCCTTaGTTTCCTAAATTTGACTCATGGGACAGACCTGGCCCAAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: YFVCPTIHIYDKTYP*FPKFDSWDRPGPRS Trigger: GCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTTAGGAAAGCAAGGATAGGTTTTGTCATAGATATGGATAGTTGGACATACAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR TCA 90 bp | GCTGTTATACTAAAGAACAGAATAAAGATTGTCCATTATATAGTGTaGGGGCAGCTTACAAAATGCTCCTTGATCAGCCTATACTGTATT | + |
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Preference number: 1 (lower is better) Translates to: AVILKNRIKIVHYIV*GQLTKCSLISLYCI Trigger: AATACAGTATAGGCTGATCAAGGAGCATTTTGTAAGCTGCCCTCACACTATATAATGGACAATCTTTATTCTGTTCTTTAGTATAACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR CAA 90 bp | TCCCAGGCAAACTCCGCGATCAGCTGGTACGGAAGAAAGGAGTACTaGACGAGGAATTCTCTCCACTGCTTCCACGTGGGCTCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SQANSAISWYGRKEY*TRNSLHCFHVGSLR Trigger: CCTGAGGGAGCCCACGTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGATCGCGGAGTTTGCCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR GCA 90 bp | CGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCAAGTCAGCTGGCATGGTaGCAGAGTCAGAGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RSHVGCKPVSARPRLMSSSQLAW*QSQRKR Trigger: CCTCTTCCTCTGACTCTGGCACCATGCCAGCTGACT...TGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCGTCTGTCCGTCTGTCGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGACCTGGTTGAAGCCTTaGCACACAGAAGCAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: CPSVRLSVSRWMQACFSQTWLKP*HTEAAP Trigger: AGGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGT...CTGGCTGAAACAGGCTTGCATCCAACGTGAGACCGACAGACGGACAGACGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAGGCAAACTCCGCGATCAGCTGGTACGGAAGAAAGGAGTACTTGACGAGGGTCCAGAAGCTTGGTaGAAATGTCCTCGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VPGKLRDQLVRKKGVLDEGPEAW*KCPRQS Trigger: GCTCTGGCGAGGACATTTTCACCAAGCTTCTGGACC...CTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGATCGCGGAGTTTGCCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCAGAAGACTCGGCCTGGTaGGCATTCCATTCAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: RSHVGCKPVSARPRLMSSEDSAW*AFHSTP Trigger: TGGAGTTGAATGGAATGCCCACCAGGCCGAGTCTTC...TGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCGTCTGTCCGTCTGTCGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGAAGACTCGGCCTGGTaGGCATTCCATTCAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: CPSVRLSVSRWMQACFSQEDSAW*AFHSTP Trigger: TGGAGTTGAATGGAATGCCCACCAGGCCGAGTCTTC...CTGGCTGAAACAGGCTTGCATCCAACGTGAGACCGACAGACGGACAGACGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACTGGCCCAAGAAGCCTaGTTTGGGAGTATGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: RSHVGCKPVSARPRLMSSLAQEA*FGSMSV Trigger: AACTGACATACTCCCAAACCAGGCTTCTTGGGCCAG...TGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACAAGTCAGCTGGCATGGTaGCAGAGTCAGAGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VGCKPVSARPRLMSSHSTSQLAW*QSQRKR Trigger: CCTCTTCCTCTGACTCTGGCACCATGCCAGCTGACT...TGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTACGGAAGAAAGGAGTACTTGACGAGGAATTCTCTCCACTGCTTCCACGTGTACTCCCAGAGATTCTaGGGTGGCTTCACTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WYGRKEYLTRNSLHCFHVYSQRF*GGFTPR Trigger: CCTGGGAGTGAAGCCACCGCAGAATCTCTGGGAGTA...CACGTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTTACTTCAGCTCACTTCTCGACCAGATCCTCCAAAAAGAGAACAACTCCATCCACTGCTTCCACGTaGGCTCCCTCAGGTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ALTSAHFSTRSSKKRTTPSTAST*APSGPE Trigger: TTCTGGACCTGAGGGAGCCCACGTGGAAGCAGTGGA...TGGAGTTGTTCTCTTTTTGGAGGATCTGGTCGAGAAGTGAGCTGAAGTAAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTTACTTCAGCTCACTTCTCGACCAGATCCTCCAAAAAGAGAACAACTCCAGGCAGATGGTGTGGATaGAGGGTAGGAAGCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALTSAHFSTRSSKKRTTPGRWCG*RVGSSL Trigger: CAGACTGCTTCCTACCCTTCATCCACACCATCTGCC...TGGAGTTGTTCTCTTTTTGGAGGATCTGGTCGAGAAGTGAGCTGAAGTAAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACATCTGCTGAGTTCCATTCAACTCCATaGTCACAGAAGGAGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: KPVSARPRLMSSHSTSAEFHSTP*SQKENP Trigger: TGGGTTCTCCTTCTGTGAGCATGGAGTTGAATGGAA...CTCAGCAGATGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAAGTCCCTTGTCTCTTTaGATGTCACAGCTTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: NLTHGTDLAQEAWFGSMSSPLSL*MSQLGC Trigger: ACAACCAAGCTGTGACATTCAAAGAGACAAGGGACT...TGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCTTGAACTCAAAAATCCACCTGCCTGTTTTCCTAGTGCTCAGATTCAAGGTGAGTCCAATCTGACCTaGGTAGCAGTCAGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GLELKNPPACFPSAQIQGESNLT*VAVSWH Trigger: ATGCCAGCTGACTGCTACCCAGGTCAGATTGGACTC...ACCTTGAATCTGAGCACTAGGAAAACAGGCAGGTGGATTTTTGAGTTCAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGCATTCCATTCAACTCCATGCTCACAGAAGGAGAACCCAATTTCCAATGCCTAAATTTGACTCATaGGACAGACCTGGCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GGHSIQLHAHRRRTQFPMPKFDS*DRPGPR Trigger: TCTTGGGCCAGGTCTGTCCCATGAGTCAAATTTAGG...CATTGGAAATTGGGTTCTCCTTCTGTGAGCATGGAGTTGAATGGAATGCCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACATCTGCTGAGTCTCTGAGTTTATTCTaGAACCTACCAACTATTCAG | + |
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Preference number: 2 (lower is better) Translates to: KPVSARPRLMSSHSTSAESLSLF*NLPTIQ Trigger: CTGAATAGTTGGTAGGTTTCAGAATAAACTCAGAGA...CTCAGCAGATGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR TCA 90 bp | TCGTCATTGGTATTTCCTTACCAACCATCTACCACTGAAAGGCACTTACTTCAGGTCTGGGTGAGCTCTTaGGAGCGTAGAGCAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SSLVFPYQPSTTERHLLQVWVSS*ERRARI Trigger: TATTCTTGCTCTACGCTCTCAAGAGCTCACCCAGAC...CTGAAGTAAGTGCCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCAATGCTCATAACAGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCAGTCCCTTGTCTCTTTaGATGTCACAGCTTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: ISNAHNRKQHSYAALSLSSPLSL*MSQLGC Trigger: ACAACCAAGCTGTGACATTCAAAGAGACAAGGGACT...GCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCTGTTATGAGCATTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGCACTTACTTCAGCTCACTTCTCGACCAGATCCTCCAAAAAGAGAACAAGAAGAAAGGAGTACTTaGCGAGGAATTCTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: ERHLLQLTSRPDPPKREQEERST*RGILST Trigger: AGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTC...TTGTTCTCTTTTTGGAGGATCTGGTCGAGAAGTGAGCTGAAGTAAGTGCCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR CAA 90 bp | ATCCCCCATGCCAGGTCTGAAAATACTTTAAAGGGACCATCGTCATaGGTATTTCCTTACCAACCATCTACCACTGAAAGGCACTTACTT | + |
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Preference number: 2 (lower is better) Translates to: IPHARSENTLKGPSS*VFPYQPSTTERHLL Trigger: AAGTAAGTGCCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGATGGTCCCTTTAAAGTATTTTCAGACCTGGCATGGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGACTCGGCATAATTATACTTGCTGTTATACTAAAGAACAGAATAAAGATTGGGTAGCAGTCAGCTaGCATGGTGCCAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GRTRHNYTCCYTKEQNKDWVAVS*HGARVR Trigger: TCTGACTCTGGCACCATGCCAGCTGACTGCTACCCA...ATCTTTATTCTGTTCTTTAGTATAACAGCAAGTATAATTATGCCGAGTCCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGACTCGGCATAATTATACTTGCTGTTATACTAAAGAACAGAATAAAGATCTCATGGGACAGACCTaGCCCAAGAAGCCTGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GRTRHNYTCCYTKEQNKDLMGQT*PKKPGL Trigger: CAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAG...ATCTTTATTCTGTTCTTTAGTATAACAGCAAGTATAATTATGCCGAGTCCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGACTCGGCATAATTATACTTGCTGTTATACTAAAGAACAGAATAAAGATGAGTCCAATCTGACCTaGGTAGCAGTCAGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GRTRHNYTCCYTKEQNKDESNLT*VAVSWH Trigger: ATGCCAGCTGACTGCTACCCAGGTCAGATTGGACTC...ATCTTTATTCTGTTCTTTAGTATAACAGCAAGTATAATTATGCCGAGTCCTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR GCA 72 bp | GTCCAATCTGACCTGGGTAGCAGTCAGCTGGCATGGTaGCAGAGTCAGAGGAAGAGGGACCTGGTTGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: VQSDLGSSQLAW*QSQRKRDLVEA Trigger: GGCTTCAACCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCCAGCTGACTGCTACCCAGGTCAGATTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR GCA 72 bp | TCTGTCCGTCTGTCCGTCTGTCGGTCTCACGTTGGATaGAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: SVRLSVCRSHVG*KPVSARPRLMS Trigger: GCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCGACAGACGGACAGACGGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR CCA 72 bp | GACCATGAGTCCAATCTGACCTGGGTAGCAGTCAGCTaGCATGGTGCCAGAGTCAGAGGAAGAGGGACCTGG | + |
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Preference number: 3 (lower is better) Translates to: DHESNLTWVAVS*HGARVRGRGTW Trigger: CCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCCAGCTGACTGCTACCCAGGTCAGATTGGACTCATGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR TCA 72 bp | GCTTCCACGTGGGCTCCCTCAGGTCCAGAAGCTTGGTaGAAATGTCCTCGCCAGAGCTGTTTTCCTGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: ASTWAPSGPEAW*KCPRQSCFPAE Trigger: CTCTGCAGGAAAACAGCTCTGGCGAGGACATTTTCACCAAGCTTCTGGACCTGAGGGAGCCCACGTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR TCA 72 bp | GGCATGGTGCCAGAGTCAGAGGAAGAGGGACCTGGTTaGAGCCTTGACACACAGAAGCAGCACCTCGCATTA | + |
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Preference number: 3 (lower is better) Translates to: GMVPESEEEGPG*SLDTQKQHLAL Trigger: TAATGCGAGGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR CCA 72 bp | GACTGGCTGGGTATTGACCATGAGTCCAATCTGACCTaGGTAGCAGTCAGCTGGCATGGTGCCAGAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: DWLGIDHESNLT*VAVSWHGARVR Trigger: TCTGACTCTGGCACCATGCCAGCTGACTGCTACCCAGGTCAGATTGGACTCATGGTCAATACCCAGCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR TCA 72 bp | ACTCCGCGATCAGCTGGTACGGAAGAAAGGAGTACTTaGCGAGGAATTCTCTCCACTGCTTCCACGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: TPRSAGTEERST*RGILSTASTWA Trigger: AGCCCACGTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGATCGCGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR GCA 72 bp | ATGCAGTGCCCTCAGAGGCCAGAAGAGGATGCTAGATaGTCTGAGGTTGGAGTCACTGTAGACTGCCTGATG | + |
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Preference number: 3 (lower is better) Translates to: MQCPQRPEEDAR*SEVGVTVDCLM Trigger: CATCAGGCAGTCTACAGTGACTCCAACCTCAGAGCATCTAGCATCCTCTTCTGGCCTCTGAGGGCACTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACAGACCTGGTTGAAGCCTaGACACACAGAAGCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: VGCKPVSARPRLMSSHSTDLVEA*THRSST Trigger: GGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGTC...TGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGTGACCTGGTTGAAGCCTaGACACACAGAAGCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: FDSWDRPGPRSLVWEYVSDLVEA*THRSST Trigger: GGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGTC...ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| 3UTR TCA 72 bp | GGTACAGGTATAGCAAGCCAAGTCTGGGTGAGCTCTTaGGAGCGTAGAGCAAGAATAGGGATCTACCCGGGT | + |
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Preference number: 3 (lower is better) Translates to: GTGIASQVWVSS*ERRARIGIYPG Trigger: ACCCGGGTAGATCCCTATTCTTGCTCTACGCTCTCAAGAGCTCACCCAGACTTGGCTTGCTATACCTGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR CCA 72 bp | AGAAACGAGTCCCTTGTCTCTTTGAATGTCACAGCTTaGTTGTCAGGTAGATTCACGGGCTCGCTCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RNESLVSLNVTA*LSGRFTGSLGP Trigger: AGGCCCGAGCGAGCCCGTGAATCTACCTGACAACCAAGCTGTGACATTCAAAGAGACAAGGGACTCGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTACTTCAGCTCACTTCTCGACCAGATCCTCCAAAAAGAGAACAACTCCACCCGGGTTGACAGCCTaGTACTCCCAGAGATTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALTSAHFSTRSSKKRTTPPGLTA*YSQRFC Trigger: GCAGAATCTCTGGGAGTACAAGGCTGTCAACCCGGG...TGGAGTTGTTCTCTTTTTGGAGGATCTGGTCGAGAAGTGAGCTGAAGTAAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTACGGAAGAAAGGAGTACTTGACGAGGAATTCTCTCCACTGCTTCCACGTGCTCAGGTCCAGAAGCTaGGTGAAAATGTCCTCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WYGRKEYLTRNSLHCFHVLRSRS*VKMSSP Trigger: TGGCGAGGACATTTTCACCAAGCTTCTGGACCTGAG...CACGTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| 3UTR TCA 72 bp | AAGAGAACAACTCCAGAACAGAGAGCAGCACGGCATTaGCGATCAGGAAGCGAGATGTCCAGTAGTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: KRTTPEQRAARH*RSGSEMSSSGP Trigger: AGGTCCACTACTGGACATCTCGCTTCCTGATCGTCAATGCCGTGCTGCTCTCTGTTCTGGAGTTGTTCTCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| 3UTR TCA 72 bp | GGGGGCGCTAGGCAACCTCATCCCCCATGCCAGGTCTaGAAATACTTTAAAGGGACCATCGTCATTGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: GGARQPHPPCQV*KYFKGTIVIGI Trigger: AATACCAATGACGATGGTCCCTTTAAAGTATTTTCAGACCTGGCATGGGGGATGAGGTTGCCTAGCGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| 3UTR CCA 72 bp | AATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTaGTTTGGGAGTATGTCAGTTAGTGAGGTTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NLTHGTDLAQEA*FGSMSVSEVRA Trigger: AGCCCTAACCTCACTAACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCGAGTCCCTTGTCTCTTaGAATGTCACAGCTTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KFDSWDRPGPRSLVWEYVESLVS*NVTAWL Trigger: CAACCAAGCTGTGACATTCAAAGAGACAAGGGACTC...GACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCAATGCTCATAACAGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCGAGTCCCTTGTCTCTTaGAATGTCACAGCTTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ISNAHNRKQHSYAALSLSESLVS*NVTAWL Trigger: CAACCAAGCTGTGACATTCAAAGAGACAAGGGACTC...GCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCTGTTATGAGCATTGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCAATGCTCATAACAGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCCTTGCTTTCCTAAATTaGACTCATGGGACAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISNAHNRKQHSYAALSLSLAFLN*THGTDL Trigger: CAGGTCTGTCCCATGAGTCAAATTTAGGAAAGCAAG...GCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCTGTTATGAGCATTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR TCA 72 bp | ATCGTCATTGGTATTTCCTTACCAACCATCTACCACTaGAAGGCACTTACTTCAGCTCACTTCTCGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IVIGISLPTIYH*KALTSAHFSTR Trigger: TCTGGTCGAGAAGTGAGCTGAAGTAAGTGCCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| 3UTR GCA 72 bp | TGTCCAACTATCCATATCTATGACAAAACCTATCCTTaGTTTCCTAAATTTGACTCATGGGACAGACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPTIHIYDKTYP*FPKFDSWDRPG Trigger: GCCAGGTCTGTCCCATGAGTCAAATTTAGGAAAGCAAGGATAGGTTTTGTCATAGATATGGATAGTTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR TCA 72 bp | CTAAAGAACAGAATAAAGATTGTCCATTATATAGTGTaGGGGCAGCTTACAAAATGCTCCTTGATCAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKNRIKIVHYIV*GQLTKCSLISL Trigger: TAGGCTGATCAAGGAGCATTTTGTAAGCTGCCCTCACACTATATAATGGACAATCTTTATTCTGTTCTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR CCA 72 bp | CTGAAACCTACCAACTATTCAGTGAGAAACTATGACTaGATTCTAGGTCTTTATTTTGTATGTCCAACTATC | + |
|
Preference number: 3 (lower is better) Translates to: LKPTNYSVRNYD*ILGLYFVCPTI Trigger: GATAGTTGGACATACAAAATAAAGACCTAGAATCCAGTCATAGTTTCTCACTGAATAGTTGGTAGGTTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR TCA 72 bp | TATTCTGAAACCTACCAACTATTCAGTGAGAAACTATaGCTGGATTCTAGGTCTTTATTTTGTATGTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YSETYQLFSEKL*LDSRSLFCMSN Trigger: GTTGGACATACAAAATAAAGACCTAGAATCCAGTCATAGTTTCTCACTGAATAGTTGGTAGGTTTCAGAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR GCA 72 bp | CATACTTATGATGGCAGGACTCGGCATAATTATACTTaGTGTTATACTAAAGAACAGAATAAAGATTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HTYDGRTRHNYT*CYTKEQNKDCP Trigger: TGGACAATCTTTATTCTGTTCTTTAGTATAACAGCAAGTATAATTATGCCGAGTCCTGCCATCATAAGTATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CCA 90 bp | CGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCATCCACTGCTTCCACGTaGGCTCCCTCAGGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHVGCKPVSARPRLMSSSTAST*APSGPE Trigger: TTCTGGACCTGAGGGAGCCCACGTGGAAGCAGTGGA...TGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | GACGATCAGGAAGCGAGATGTCCAGTAGTGGACCTCCAGCCAGTCCCAGGCAAATCGCTCACAGAAATCTaGGGGCCGCTGCTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: DDQEARCPVVDLQPVPGKSLTEI*GPLLLT Trigger: TGTCAGAAGCAGCGGCCCTCAGATTTCTGTGAGCGA...TTTGCCTGGGACTGGCTGGAGGTCCACTACTGGACATCTCGCTTCCTGATCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR TCA 90 bp | CGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCAAATCCCCCTCCTCTCTaGGGATTTACTCGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSHVGCKPVSARPRLMSSNPPPL*GFTRPV Trigger: CACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGATT...TGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR TCA 90 bp | GGTAGCAGTCAGCTGGCATGGTGCCAGAGTCAGAGGAAGAGGGACCTGGTTGAAGGCAGATGGTGTGGATaGAGGGTAGGAAGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSQLAWCQSQRKRDLVEGRWCG*RVGSSL Trigger: CAGACTGCTTCCTACCCTTCATCCACACCATCTGCC...TTCAACCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCCAGCTGACTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCGTCTGTCCGTCTGTCGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGCCAGAGCTGTTTTCCTaGAGAGGGCAGATGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSVRLSVSRWMQACFSQPELFS*RGQMVW Trigger: CCACACCATCTGCCCTCTGCAGGAAAACAGCTCTGG...CTGGCTGAAACAGGCTTGCATCCAACGTGAGACCGACAGACGGACAGACGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR CAA 72 bp | TGCCAGAGTCAGAGGAAGAGGGACCTGGTTGAAGCCTaGACACACAGAAGCAGCACCTCGCATTACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQSQRKRDLVEA*THRSSTSHYQG Trigger: CCCCTGGTAATGCGAGGTGCTGCTTCTGTGTGTCAAGGCTTCAACCAGGTCCCTCTTCCTCTGACTCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCAGGCAAACTCCGCGATCAGCTGGTACGGAAGAAAGGAGTACTTGACGAGAATCCCCCTCCTCTCTaGGGATTTACTCGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPGKLRDQLVRKKGVLDENPPPL*GFTRPV Trigger: CACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGATT...CTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGATCGCGGAGTTTGCCTGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCGTCTGTCCGTCTGTCGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAGAACATGGCCATaGAAAGCCCCTGTGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: CPSVRLSVSRWMQACFSQARTWP*KAPVSI Trigger: TATCGACACAGGGGCTTTTCATGGCCATGTTCTGGC...CTGGCTGAAACAGGCTTGCATCCAACGTGAGACCGACAGACGGACAGACGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | GACGATCAGGAAGCGAGATGTCCAGTAGTGGACCTCCAGCCAGTCCCAGGCAAAGGATGCTCTTCCTCCTaGTCTCTCATGCTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DDQEARCPVVDLQPVPGKGCSSS*SLMLRS Trigger: TGACCTGAGCATGAGAGAGCAGGAGGAAGAGCATCC...TTTGCCTGGGACTGGCTGGAGGTCCACTACTGGACATCTCGCTTCCTGATCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR CCA 90 bp | TTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGTTCCACTGCTTCCACGTaGGCTCCCTCAGGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FDSWDRPGPRSLVWEYVSSTAST*APSGPE Trigger: TTCTGGACCTGAGGGAGCCCACGTGGAAGCAGTGGA...ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR CAA 72 bp | AACGAGTCCCTTGTCTCTTTGAATGTCACAGCTTGGTaGTCAGGTAGATTCACGGGCTCGCTCGGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NESLVSLNVTAW*SGRFTGSLGPC Trigger: GCAAGGCCCGAGCGAGCCCGTGAATCTACCTGACAACCAAGCTGTGACATTCAAAGAGACAAGGGACTCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR CAA 72 bp | AACTCCGCGATCAGCTGGTACGGAAGAAAGGAGTACTaGACGAGGAATTCTCTCCACTGCTTCCACGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSAISWYGRKEY*TRNSLHCFHVG Trigger: GCCCACGTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGATCGCGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACATCGCTCACAGAAATCTaGGGGCCGCTGCTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VGCKPVSARPRLMSSHSTSLTEI*GPLLLT Trigger: TGTCAGAAGCAGCGGCCCTCAGATTTCTGTGAGCGA...TGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCATCGCTCACAGAAATCTaGGGGCCGCTGCTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NLTHGTDLAQEAWFGSMSSLTEI*GPLLLT Trigger: TGTCAGAAGCAGCGGCCCTCAGATTTCTGTGAGCGA...TGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCCCTTGTCTCTTTGAATGTCACAGCTTGGTTGTCAGGTAGATTCACGGGCGGCAGATGGTGTGGATaGAGGGTAGGAAGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLVSLNVTAWLSGRFTGGRWCG*RVGSSL Trigger: CAGACTGCTTCCTACCCTTCATCCACACCATCTGCC...GCCCGTGAATCTACCTGACAACCAAGCTGTGACATTCAAAGAGACAAGGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | TTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGTGCCAGAACATGGCCATaGAAAGCCCCTGTGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: FDSWDRPGPRSLVWEYVSARTWP*KAPVSI Trigger: TATCGACACAGGGGCTTTTCATGGCCATGTTCTGGC...ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | TTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGTGGATGCTCTTCCTCCTaGTCTCTCATGCTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FDSWDRPGPRSLVWEYVSGCSSS*SLMLRS Trigger: TGACCTGAGCATGAGAGAGCAGGAGGAAGAGCATCC...ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCTACTCCCAGAGATTCTaGGGTGGCTTCACTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFDSWDRPGPRSLVWEYVYSQRF*GGFTPR Trigger: CCTGGGAGTGAAGCCACCGCAGAATCTCTGGGAGTA...GACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCATACTCCCAGAGATTCTaGGGTGGCTTCACTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLTHGTDLAQEAWFGSMSYSQRF*GGFTPR Trigger: CCTGGGAGTGAAGCCACCGCAGAATCTCTGGGAGTA...TGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCCCAGAGCTGTTTTCCTaGAGAGGGCAGATGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFDSWDRPGPRSLVWEYVPELFS*RGQMVW Trigger: CCACACCATCTGCCCTCTGCAGGAAAACAGCTCTGG...GACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CCA 90 bp | TTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGTGATACTTTCCAGAAGTaGCTCCACATCCTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FDSWDRPGPRSLVWEYVSDTFQK*LHILWG Trigger: GCCCCAGAGGATGTGGAGCCACTTCTGGAAAGTATC...ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACAGTCTGGGTGAGCTCTTaGGAGCGTAGAGCAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VGCKPVSARPRLMSSHSTVWVSS*ERRARI Trigger: TATTCTTGCTCTACGCTCTCAAGAGCTCACCCAGAC...TGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | AATCCACCTGCCTGTTTTCCTAGTGCTCAGATTCAAGGTGTGCACTACCACACCCTGCTTCTGACAGGATaGTCTTCCTCCTGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NPPACFPSAQIQGVHYHTLLLTG*SSSCSL Trigger: GAGAGAGCAGGAGGAAGAGCATCCTGTCAGAAGCAG...GGTGTGGTAGTGCACACCTTGAATCTGAGCACTAGGAAAACAGGCAGGTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCGTCTGTCCGTCTGTCGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGTGGTATAAGGTGCCCTaGAAAACTCTTCTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPSVRLSVSRWMQACFSQWYKVP*KTLLLS Trigger: TGACAGAAGAAGAGTTTTCCAGGGCACCTTATACCA...CTGGCTGAAACAGGCTTGCATCCAACGTGAGACCGACAGACGGACAGACGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CCA 90 bp | AATCCACCTGCCTGTTTTCCTAGTGCTCAGATTCAAGGTGTGCACTACCACACCGATACTTTCCAGAAGTaGCTCCACATCCTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPPACFPSAQIQGVHYHTDTFQK*LHILWG Trigger: GCCCCAGAGGATGTGGAGCCACTTCTGGAAAGTATC...GGTGTGGTAGTGCACACCTTGAATCTGAGCACTAGGAAAACAGGCAGGTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | AAATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCGTCTGGGTGAGCTCTTaGGAGCGTAGAGCAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KFDSWDRPGPRSLVWEYVVWVSS*ERRARI Trigger: TATTCTTGCTCTACGCTCTCAAGAGCTCACCCAGAC...GACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCATTCCATTCAACTCCATGCTCACAGAAGGAGAACCCAATTTCCAATGCTGCTTCTGACAGGATaGTCTTCCTCCTGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGHSIQLHAHRRRTQFPMLLLTG*SSSCSL Trigger: GAGAGAGCAGGAGGAAGAGCATCCTGTCAGAAGCAG...CATTGGAAATTGGGTTCTCCTTCTGTGAGCATGGAGTTGAATGGAATGCCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCACACCAGTTAAAGCTGTaGGAACACCGGAGAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: NLTHGTDLAQEAWFGSMSHQLKL*EHRRRI Trigger: GATTCTTCTCCGGTGTTCTCACAGCTTTAACTGGTG...TGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR TCA 90 bp | AAATTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCGATACACAAGCAGGATaGCTGCCACACCAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFDSWDRPGPRSLVWEYVDTQAG*LPHQLK Trigger: CTTTAACTGGTGTGGCAGTCATCCTGCTTGTGTATC...GACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR TCA 90 bp | TTTGACTCATGGGACAGACCTGGCCCAAGAAGCCTGGTTTGGGAGTATGTCAGTGAAGAAAGGAGTACTTaGCGAGGAATTCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FDSWDRPGPRSLVWEYVSEERST*RGILST Trigger: AGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTC...ACTGACATACTCCCAAACCAGGCTTCTTGGGCCAGGTCTGTCCCATGAGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCATTCCATTCAACTCCATGCTCACAGAAGGAGAACCCAATTTCCAATGTTACTCGCCCTGTGCTaGGAGCTAAGGGATTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGHSIQLHAHRRRTQFPMLLALC*ELRDSD Trigger: ATCAGAATCCCTTAGCTCCCAGCACAGGGCGAGTAA...CATTGGAAATTGGGTTCTCCTTCTGTGAGCATGGAGTTGAATGGAATGCCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR CCA 90 bp | ATCAGCTGGTACGGAAGAAAGGAGTACTTGACGAGGAATTCTCTCCACTGCTTCTTACTCGCCCTGTGCTaGGAGCTAAGGGATTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISWYGRKEYLTRNSLHCFLLALC*ELRDSD Trigger: ATCAGAATCCCTTAGCTCCCAGCACAGGGCGAGTAA...GAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCAGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| 3UTR CAA 72 bp | CGCATTACCAGGGGTAGAAACGAGTCCCTTGTCTCTTaGAATGTCACAGCTTGGTTGTCAGGTAGATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RITRGRNESLVS*NVTAWLSGRFT Trigger: CGTGAATCTACCTGACAACCAAGCTGTGACATTCAAAGAGACAAGGGACTCGTTTCTACCCCTGGTAATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR TCA 90 bp | GCTCACTTCTCGACCAGATCCTCCAAAAAGAGAACAACTCCAGAACAGAGAGCACACCAGTTAAAGCTGTaGGAACACCGGAGAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: AHFSTRSSKKRTTPEQRAHQLKL*EHRRRI Trigger: GATTCTTCTCCGGTGTTCTCACAGCTTTAACTGGTG...TGCTCTCTGTTCTGGAGTTGTTCTCTTTTTGGAGGATCTGGTCGAGAAGTGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| CDS-3UTR TCA 90 bp | GAGTCCCTTGTCTCTTTGAATGTCACAGCTTGGTTGTCAGGTAGATTCACGGGCGAAGAAAGGAGTACTTaGCGAGGAATTCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ESLVSLNVTAWLSGRFTGEERST*RGILST Trigger: AGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTC...GCCCGTGAATCTACCTGACAACCAAGCTGTGACATTCAAAGAGACAAGGGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR TCA 90 bp | GTTAGTGAGGTTAGGGCTACTGACCATAATGGCCTTCCTTTTTATCTTTTCTTCGGTCCAGAAGCTTGGTaGAAATGTCCTCGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSEVRATDHNGLPFYLFFGPEAW*KCPRQS Trigger: GCTCTGGCGAGGACATTTTCACCAAGCTTCTGGACC...GAAGAAAAGATAAAAAGGAAGGCCATTATGGTCAGTAGCCCTAACCTCACTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGTACGGAAGAAAGGAGTACTTGACGAGGAATTCTCTCCACTGCTTCCACTGGTATAAGGTGCCCTaGAAAACTCTTCTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWYGRKEYLTRNSLHCFHWYKVP*KTLLLS Trigger: TGACAGAAGAAGAGTTTTCCAGGGCACCTTATACCA...GTGGAAGCAGTGGAGAGAATTCCTCGTCAAGTACTCCTTTCTTCCGTACCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR TCA 90 bp | GCTTACTCCATACTTATGATGGCAGGACTCGGCATAATTATACTTGCTGTTATAGGTCCAGAAGCTTGGTaGAAATGTCCTCGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYSILMMAGLGIIILAVIGPEAW*KCPRQS Trigger: GCTCTGGCGAGGACATTTTCACCAAGCTTCTGGACC...TATAACAGCAAGTATAATTATGCCGAGTCCTGCCATCATAAGTATGGAGTAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCCTGAAGTTTTCTCTGAGTGTTCAGATTCTCTGCTaGGCCAATGATACACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQHSYAALSLSLKFSLSVQILC*ANDTQA Trigger: TGCTTGTGTATCATTGGCGCAGCAGAGAATCTGAAC...ACTCAGAGAAAACTTCAGGCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
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| CDS-3UTR TCA 90 bp | AGCAGTCTGTGTAGTCAAACAGGTACAGGTATAGCAAGCCAAGTCTGGGTGAGCACATCATTATTCTGCTaGATGTCTTCAACTCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCSQTGTGIASQVWVSTSLFC*MSSTRI Trigger: AATGCGAGTTGAAGACATTCAGCAGAATAATGATGT...GCTCACCCAGACTTGGCTTGCTATACCTGTACCTGTTTGACTACACAGACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| CDS-3UTR GCA 90 bp | GCTTACTCCATACTTATGATGGCAGGACTCGGCATAATTATACTTGCTGTTATAGGATGCTCTTCCTCCTaGTCTCTCATGCTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AYSILMMAGLGIIILAVIGCSSS*SLMLRS Trigger: TGACCTGAGCATGAGAGAGCAGGAGGAAGAGCATCC...TATAACAGCAAGTATAATTATGCCGAGTCCTGCCATCATAAGTATGGAGTAAGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR TCA 90 bp | GACCATCGTCATTGGTATTTCCTTACCAACCATCTACCACTGAAAGGCACTTACTCATTCCCATATTTCTaGAAGGCTGCAAGACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DHRHWYFLTNHLPLKGTYSFPYF*KAARLW Trigger: CCAAAGTCTTGCAGCCTTTCAGAAATATGGGAATGA...GTAAGTGCCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGTGAGGTTAGGGCTACTGACCATAATGGCCTTCCTTTTTATCTTTTCTTCTTATCTACAGCCTTGTaGACCAGGAGGCCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSEVRATDHNGLPFYLFFLSTAL*TRRPCS Trigger: TGAACATGGCCTCCTGGTGCACAAGGCTGTAGATAA...GAAGAAAAGATAAAAAGGAAGGCCATTATGGTCAGTAGCCCTAACCTCACTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGAACTCAAAAATCCACCTGCCTGTTTTCCTAGTGCTCAGATTCAAGGTTGGTATAAGGTGCCCTaGAAAACTCTTCTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLELKNPPACFPSAQIQGWYKVP*KTLLLS Trigger: TGACAGAAGAAGAGTTTTCCAGGGCACCTTATACCA...ACCTTGAATCTGAGCACTAGGAAAACAGGCAGGTGGATTTTTGAGTTCAAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CCA 90 bp | AATCCACCTGCCTGTTTTCCTAGTGCTCAGATTCAAGGTGTGCACTACCACACCATCAATGTTAATAATTaGGTTGAAGTACAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPPACFPSAQIQGVHYHTINVNN*VEVQSP Trigger: TGGGCTCTGTACTTCAACCCAATTATTAACATTGAT...GGTGTGGTAGTGCACACCTTGAATCTGAGCACTAGGAAAACAGGCAGGTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| 3UTR CAA 72 bp | GCCAGGTCTGAAAATACTTTAAAGGGACCATCGTCATaGGTATTTCCTTACCAACCATCTACCACTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSENTLKGPSS*VFPYQPSTTER Trigger: CCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGATGGTCCCTTTAAAGTATTTTCAGACCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCCAATGCTCATAACAGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCACATCATTATTCTGCTaGATGTCTTCAACTCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ISNAHNRKQHSYAALSLSTSLFC*MSSTRI Trigger: AATGCGAGTTGAAGACATTCAGCAGAATAATGATGT...GCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCTGTTATGAGCATTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR TCA 90 bp | GTTAGTGAGGTTAGGGCTACTGACCATAATGGCCTTCCTTTTTATCTTTTCTTCTCATTCCCATATTTCTaGAAGGCTGCAAGACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEVRATDHNGLPFYLFFSFPYF*KAARLW Trigger: CCAAAGTCTTGCAGCCTTTCAGAAATATGGGAATGA...GAAGAAAAGATAAAAAGGAAGGCCATTATGGTCAGTAGCCCTAACCTCACTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR CAA 90 bp | AGAAGACTCGGCCTGGTGGGCATTCCATTCAACTCCATGCTCACAGAAGGAGAACCCGGGTTGACAGCCTaGTACTCCCAGAGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLGLVGIPFNSMLTEGEPGLTA*YSQRFC Trigger: GCAGAATCTCTGGGAGTACAAGGCTGTCAACCCGGG...TTCTCCTTCTGTGAGCATGGAGTTGAATGGAATGCCCACCAGGCCGAGTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR CAA 90 bp | CGGTCTCACGTTGGATGCAAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCAAGCCGTCGGACTTCCTaGACCACCAGATCAATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSHVGCKPVSARPRLMSSSRRTS*TTRSML Trigger: TAACATTGATCTGGTGGTCAAGGAAGTCCGACGGCT...TGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTTGCATCCAACGTGAGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS GCA 90 bp | CACCGGAGAAGAATCCCCCTCCTCTCTGAGGATTTACTCGCCCTGTaGTGGGAGCTAAGGGATTCTGATCATTCCCATATTTCTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRRRIPLLSEDLLAL*WELRDSDHSHISER Trigger: CCTTTCAGAAATATGGGAATGATCAGAATCCCTTAGCTCCCAGCACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGATTCTTCTCCGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000127973.8 |
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| CDS CCA 90 bp | CGGAGAAGAATCCCCCTCCTCTCTGAGGATTTACTCGCCCTGTGCTaGGAGCTAAGGGATTCTGATCATTCCCATATTTCTGAAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRRIPLLSEDLLALC*ELRDSDHSHISERL Trigger: CAGCCTTTCAGAAATATGGGAATGATCAGAATCCCTTAGCTCCCAGCACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGATTCTTCTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000127973.8 |
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| CDS-3UTR CAA 90 bp | AGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCCTGAAGTTTTCTCTGAGTCCCGGGTTGACAGCCTaGTACTCCCAGAGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKQHSYAALSLSLKFSLSPGLTA*YSQRFC Trigger: GCAGAATCTCTGGGAGTACAAGGCTGTCAACCCGGG...ACTCAGAGAAAACTTCAGGCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR CAA 90 bp | GGCATTGACGATCAGGAAGCGAGATGTCCAGTAGTGGACCTCCAGCCAGTCCCAAAAGGCTGCAAGACTTaGGACTACATCATTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GIDDQEARCPVVDLQPVPKGCKT*DYIIIL Trigger: CAGAATAATGATGTAGTCCAAAGTCTTGCAGCCTTT...TGGGACTGGCTGGAGGTCCACTACTGGACATCTCGCTTCCTGATCGTCAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCCTTGTCTCTTTGAATGTCACAGCTTGGTTGTCAGGTAGATTCACGGGCTCCCTGAGGAGAATGTaGACTTTAGGAAAACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLVSLNVTAWLSGRFTGSLRRM*TLGKPS Trigger: GGAAGGTTTTCCTAAAGTCAACATTCTCCTCAGGGA...GCCCGTGAATCTACCTGACAACCAAGCTGTGACATTCAAAGAGACAAGGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
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| CDS-3UTR CAA 90 bp | GGTCTTGAACTCAAAAATCCACCTGCCTGTTTTCCTAGTGCTCAGATTCAAGGTCTCAGGTCCAGAAGCTaGGTGAAAATGTCCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLELKNPPACFPSAQIQGLRSRS*VKMSSP Trigger: TGGCGAGGACATTTTCACCAAGCTTCTGGACCTGAG...ACCTTGAATCTGAGCACTAGGAAAACAGGCAGGTGGATTTTTGAGTTCAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGTTTCAGCCAGGCCAAGGCTGATGAGCTCACATTCTACATCTGCTGAGAACCTGAGGAGAATGTaGACTTTAGGAAAACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPVSARPRLMSSHSTSAENLRRM*TLGKPS Trigger: GGAAGGTTTTCCTAAAGTCAACATTCTCCTCAGGTT...CTCAGCAGATGTAGAATGTGAGCTCATCAGCCTTGGCCTGGCTGAAACAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069281.8 |
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| CDS-3UTR CAA 90 bp | GCACTTACTTCAGCTCACTTCTCGACCAGATCCTCCAAAAAGAGAACAACTCCAGACACTCTGTCTTCTTaGAAGACATCCACCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALTSAHFSTRSSKKRTTPDTLSS*KTSTIK Trigger: CTTTATGGTGGATGTCTTCAAAGAAGACAGAGTGTC...TGGAGTTGTTCTCTTTTTGGAGGATCTGGTCGAGAAGTGAGCTGAAGTAAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCAATGCTCATAACAGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCGACACTCTGTCTTCTTaGAAGACATCCACCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISNAHNRKQHSYAALSLSDTLSS*KTSTIK Trigger: CTTTATGGTGGATGTCTTCAAAGAAGACAGAGTGTC...GCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCTGTTATGAGCATTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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| CDS-3UTR CAA 90 bp | TCGTCATTGGTATTTCCTTACCAACCATCTACCACTGAAAGGCACTTACTTCAGTCCCTGAGGAGAATGTaGACTTTAGGAAAACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLVFPYQPSTTERHLLQSLRRM*TLGKPS Trigger: GGAAGGTTTTCCTAAAGTCAACATTCTCCTCAGGGA...CTGAAGTAAGTGCCTTTCAGTGGTAGATGGTTGGTAAGGAAATACCAATGACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127973.8 |
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| CDS-3UTR CAA 90 bp | AGGAAACAACACAGCTACGCAGCACTGTCTCTTAGCCTGAAGTTTTCTCTGAGTAAAGGCTGCAAGACTTaGGACTACATCATTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKQHSYAALSLSLKFSLSKGCKT*DYIIIL Trigger: CAGAATAATGATGTAGTCCAAAGTCTTGCAGCCTTT...ACTCAGAGAAAACTTCAGGCTAAGAGACAGTGCTGCGTAGCTGTGTTGTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGGACTCGGCATAATTATACTTGCTGTTATACTAAAGAACAGAATAAAGATCTCAGGTCCAGAAGCTaGGTGAAAATGTCCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRTRHNYTCCYTKEQNKDLRSRS*VKMSSP Trigger: TGGCGAGGACATTTTCACCAAGCTTCTGGACCTGAG...ATCTTTATTCTGTTCTTTAGTATAACAGCAAGTATAATTATGCCGAGTCCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS-3UTR CAA 90 bp | GCTTACTCCATACTTATGATGGCAGGACTCGGCATAATTATACTTGCTGTTATAGACACTCTGTCTTCTTaGAAGACATCCACCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AYSILMMAGLGIIILAVIDTLSS*KTSTIK Trigger: CTTTATGGTGGATGTCTTCAAAGAAGACAGAGTGTC...TATAACAGCAAGTATAATTATGCCGAGTCCTGCCATCATAAGTATGGAGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
||
| CDS TCA 72 bp | GCTGTGAGAACACCGGAGAAGAATCCCCCTCCTCTCTaGGGATTTACTCGCCCTGTGCTGGGAGCTAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVRTPEKNPPPL*GFTRPVLGAKG Trigger: TCCCTTAGCTCCCAGCACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGATTCTTCTCCGGTGTTCTCACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000127973.8 |
||
| CDS CAA 72 bp | AGGACAACTTCTTCCGTCGTCCACTTATCTACAGCCTaGTGCACCAGGAGGCCATGTTCAGATTCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTTSSVVHLSTA*CTRRPCSDSLL Trigger: CAGCAGAGAATCTGAACATGGCCTCCTGGTGCACAAGGCTGTAGATAAGTGGACGACGGAAGAAGTTGTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS TCA 72 bp | ACCAGGAGGCCATGTTCAGATTCTCTGCTGCGCCAATaGTACACAAGCAGGATGACTGCCACACCAGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: TRRPCSDSLLRQ*YTSRMTATPVK Trigger: TTTAACTGGTGTGGCAGTCATCCTGCTTGTGTATCATTGGCGCAGCAGAGAATCTGAACATGGCCTCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023365.13 |
||
| CDS GCA 72 bp | AGAATCCCCCTCCTCTCTGAGGATTTACTCGCCCTGTaGTGGGAGCTAAGGGATTCTGATCATTCCCATATT | + |
|
Preference number: 6 (lower is better) Translates to: RIPLLSEDLLAL*WELRDSDHSHI Trigger: AATATGGGAATGATCAGAATCCCTTAGCTCCCAGCACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000127973.8 |
||
| CDS CCA 72 bp | ATCCCCCTCCTCTCTGAGGATTTACTCGCCCTGTGCTaGGAGCTAAGGGATTCTGATCATTCCCATATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IPLLSEDLLALC*ELRDSDHSHIS Trigger: AGAAATATGGGAATGATCAGAATCCCTTAGCTCCCAGCACAGGGCGAGTAAATCCTCAGAGAGGAGGGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000127973.8 |
||
| CDS TCA 72 bp | AAGGCTGCAAGACTTTGGACTACATCATTATTCTGCTaGATGTCTTCAACTCGCATTCTAATGGCATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KAARLWTTSLFC*MSSTRILMASG Trigger: TCCTGATGCCATTAGAATGCGAGTTGAAGACATTCAGCAGAATAATGATGTAGTCCAAAGTCTTGCAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000127973.8 |
||
| CDS CCA 72 bp | TTCTGTGGCTACTGTTCTCTATGGTATAAGGTGCCCTaGAAAACTCTTCTTCTGTCAAAGTTAAAAGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: FCGYCSLWYKVP*KTLLLSKLKAT Trigger: GGTTGCTTTTAACTTTGACAGAAGAAGAGTTTTCCAGGGCACCTTATACCATAGAGAACAGTAGCCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023365.13 ENSMUST00000069281.8 |
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