Pregenerated sensors for BEX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046432Ensembl transcript IDs: ENSMUST00000053540.11, ENSMUST00000113112.2, ENSMUST00000113113.2, ENSMUST00000178632.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATaGGAGGAAAAGGGCTACAGCGGGAGTCACAGTATGGATCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: HKAHHKRVIKGMSGK*EEKGYSGSHSMDLR Trigger: CCTGAGATCCATACTGTGACTCCCGCTGTAGCCCTTTTCCTCGCATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR TCA 90 bp | TTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTaGGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: FHANGQHCTVDRNSH*VGRQSPIRSWQHKP Trigger: GGGCTTGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCGCCCCACCTGGCACATaGCATGGAAATAACACAAGG | + |
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Preference number: 2 (lower is better) Translates to: MLMGNTALLTETHTEWEGAPPGT*HGNNTR Trigger: CCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGC...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCGGCATGTCAGGAAAATaGGAGGAAAAGGGCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: MLMGNTALLTETHTEWEGGMSGK*EEKGYS Trigger: GCTGTAGCCCTTTTCCTCGCATTTTCCTGACATGCC...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACAGGCATGTCAGGAAAATaGGAGGAAAAGGGCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: TETHTEWEGNLQLEAGNTGMSGK*EEKGYS Trigger: GCTGTAGCCCTTTTCCTCGCATTTTCCTGACATGCC...TGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAGTTGCTTTATTGACTTGACATTGCTTTCCATGCTAATGGGCAACACTGCCCCACCTGGCACATaGCATGGAAATAACACAAGG | + |
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Preference number: 2 (lower is better) Translates to: LFSCFIDLTLLSMLMGNTAPPGT*HGNNTR Trigger: CCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGC...AGTGTTGCCCATTAGCATGGAAAGCAATGTCAAGTCAATAAAGCAACTGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR GCA 72 bp | CACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATaGGAGGAAAAGGGCTACAGCGGGAGTCACAGTATG | + |
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Preference number: 3 (lower is better) Translates to: HHKRVIKGMSGK*EEKGYSGSHSM Trigger: CATACTGTGACTCCCGCTGTAGCCCTTTTCCTCGCATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| 3UTR TCA 72 bp | AATGGGCAACACTGCACTGTTGACAGAAACTCACACTaGGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: NGQHCTVDRNSH*VGRQSPIRSWQ Trigger: TTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | CAAGCCCCACCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCTTCCTGTCCATTCTaGAGGGGCTGCTCCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: QAPPGTWHGNNTRLTTNGSSCPF*RGCSIS Trigger: AGAGATGGAGCAGCCCCTGCAGAATGGACAGGAAGA...CCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053540.11 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CCA 90 bp | CAAGCCCCACCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTGGCCTCTTCGGTGGTaGTTGTGGTTATGGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAPPGTWHGNNTRLTTNGWPLRW*LWLWLW Trigger: CCACAACCATAACCACAACCACCACCGAAGAGGCCA...CCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | GCCCCACCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCAAACCCGTCATTCATCTaGCTGTTGGGAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: APPGTWHGNNTRLTTNGSNPSFI*LLGMAH Trigger: ATGGGCCATTCCCAACAGGCAGATGAATGACGGGTT...TGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | ACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACAAGCCCCCCATTCTGCAGGGGCTaGTCCATCTCTTCGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: THTEWEGNLQLEAGNTSPPFCRG*SISSFS Trigger: GGAAAACGAAGAGATGGAGCAGCCCCTGCAGAATGG...GGGGCTTGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000053540.11 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CCA 90 bp | ACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACAAGCCCCTGGCCTCTTCGGTGGTaGTTGTGGTTATGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: THTEWEGNLQLEAGNTSPWPLRW*LWLWLW Trigger: CCACAACCATAACCACAACCACCACCGAAGAGGCCA...GGGGCTTGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CCA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCTGGCCTCTTCGGTGGTaGTTGTGGTTATGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MLMGNTALLTETHTEWEGWPLRW*LWLWLW Trigger: CCACAACCATAACCACAACCACCACCGAAGAGGCCA...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | GGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCACCATTCTGCAGGGGCTaGTCCATCTCTTCGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTWHGNNTRLTTNGSLKAPFCRG*SISSFS Trigger: GGAAAACGAAGAGATGGAGCAGCCCCTGCAGAATGG...TGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053540.11 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCAACCCGTCATTCATCTaGCTGTTGGGAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: MLMGNTALLTETHTEWEGNPSFI*LLGMAH Trigger: ATGGGCCATTCCCAACAGGCAGATGAATGACGGGTT...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR TCA 90 bp | ATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCAATCTCCAGAATTCATCATGGTaGTCGTGGTGGTTAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: MGNTALLTETHTEWEGNLQNSSW*SWWLDS Trigger: GCTGTCTAACCACCACGATCACCATGATGAATTCTG...GAGATTGCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | TTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGCCATTCTGCAGGGGCTaGTCCATCTCTTCGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSMLMGNTALLTETHTEPFCRG*SISSFS Trigger: GGAAAACGAAGAGATGGAGCAGCCCCTGCAGAATGG...CTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053540.11 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | TTGACAGAAACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACGTTGTTGTTGTTGTTTaGAGCAGGCTGGTGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTETHTEWEGNLQLEAGNVVVVV*SRLVAL Trigger: GAGGGCCACCAGCCTGCTGCAAACAACAACAACAAC...GTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGTTTCTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACAGTTGTTGTTGTTGTTTaGAGCAGGCTGGTGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TETHTEWEGNLQLEAGNTVVVVV*SRLVAL Trigger: GAGGGCCACCAGCCTGCTGCAAACAACAACAACAAC...TGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | TTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGGTTGTTGTTGTTGTTTaGAGCAGGCTGGTGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLSMLMGNTALLTETHTEVVVVV*SRLVAL Trigger: GAGGGCCACCAGCCTGCTGCAAACAACAACAACAAC...CTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | CATGGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAATCTTCCTGTCCATTCTaGAGGGGCTGCTCCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: HGNNTRLTTNGSLKACQESSCPF*RGCSIS Trigger: AGAGATGGAGCAGCCCCTGCAGAATGGACAGGAAGA...TTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053540.11 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CCA 90 bp | ACATTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTTGGCCTCTTCGGTGGTaGTTGTGGTTATGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLLSMLMGNTALLTETHTWPLRW*LWLWLW Trigger: CCACAACCATAACCACAACCACCACCGAAGAGGCCA...AGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR TCA 90 bp | TTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGCAGAATTCATCATGGTaGTCGTGGTGGTTAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LLSMLMGNTALLTETHTEQNSSW*SWWLDS Trigger: GCTGTCTAACCACCACGATCACCATGATGAATTCTG...CTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | GGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATGTTGTTGTTGTTGTTTaGAGCAGGCTGGTGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GNNTRLTTNGSLKACQENVVVVV*SRLVAL Trigger: GAGGGCCACCAGCCTGCTGCAAACAACAACAACAAC...ATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR GCA 90 bp | CATGGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAACCCGTCATTCATCTaGCTGTTGGGAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: HGNNTRLTTNGSLKACQENPSFI*LLGMAH Trigger: ATGGGCCATTCCCAACAGGCAGATGAATGACGGGTT...TTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR TCA 90 bp | CATGGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAACAGAATTCATCATGGTaGTCGTGGTGGTTAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: HGNNTRLTTNGSLKACQEQNSSW*SWWLDS Trigger: GCTGTCTAACCACCACGATCACCATGATGAATTCTG...TTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CCA 90 bp | GGGGCAAGTCGGCGAGCCTGGCCTCTTCGGTGGTGGTTGTGGTTATaGTTGTGGTTGTTGTTGTTGTTGTTTGCAGCAGGCTGGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GASRRAWPLRWWLWL*LWLLLLLFAAGWWP Trigger: GGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGCTCGCCGACTTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS GCA 90 bp | TCGGTGGTGGTTGTGGTTATGGTTGTGGTTGTTGTTGTTGTTGTTTaGAGCAGGCTGGTGGCCCTCACCTCCTCCCACAGGGCGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SVVVVVMVVVVVVVV*SRLVALTSSHRAVF Trigger: GAAGACCGCCCTGTGGGAGGAGGTGAGGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CCA 90 bp | GCCCATCGGAAGTTAGGGGCAAGTCGGCGAGCCTGGCCTCTTCGGTaGTGGTTGTGGTTATGGTTGTGGTTGTTGTTGTTGTTGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: AHRKLGASRRAWPLR*WLWLWLWLLLLLFA Trigger: TGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGCTCGCCGACTTGCCCCTAACTTCCGATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | GCCCCACCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCATCATTCATCTGCCTGTaGGGAATGGCCCATCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: APPGTWHGNNTRLTTNGSSFICL*GMAHRK Trigger: CTTCCGATGGGCCATTCCCAACAGGCAGATGAATGA...TGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CCA 90 bp | CATCGGAAGTTAGGGGCAAGTCGGCGAGCCTGGCCTCTTCGGTGGTaGTTGTGGTTATGGTTGTGGTTGTTGTTGTTGTTGTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HRKLGASRRAWPLRW*LWLWLWLLLLLFAA Trigger: TGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGCTCGCCGACTTGCCCCTAACTTCCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | GCCCCACCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCATGGTTGTTGTTGTTGTaGTTTGCAGCAGGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: APPGTWHGNNTRLTTNGSWLLLL*FAAGWW Trigger: CCACCAGCCTGCTGCAAACAACAACAACAACAACCA...TGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACAAGCCCCTGTTGTTGTTGTTGTTaGCAGCAGGCTGGTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: THTEWEGNLQLEAGNTSPCCCCC*QQAGGP Trigger: AGGGCCACCAGCCTGCTGCAAACAACAACAACAACA...GGGGCTTGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | CAAGCCCCACCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTGGTTGTGGTTGTTGTaGTTGTTGTTTGCAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: QAPPGTWHGNNTRLTTNGWLWLL*LLFAAG Trigger: GCCTGCTGCAAACAACAACAACAACAACCACAACCA...CCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGGTGGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCTCATTCATCTGCCTGTaGGGAATGGCCCATCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MLMGNTALLTETHTEWEGSFICL*GMAHRK Trigger: CTTCCGATGGGCCATTCCCAACAGGCAGATGAATGA...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | CCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGTCATTCATCTGCCTGTaGGGAATGGCCCATCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PGTWHGNNTRLTTNGSLKSFICL*GMAHRK Trigger: CTTCCGATGGGCCATTCCCAACAGGCAGATGAATGA...CTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAACTCACACTGAGTGGGAAGGCAATCTCCAATTAGAAGCTGGCAACACATGTTGTTGTTGTTGTTaGCAGCAGGCTGGTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TETHTEWEGNLQLEAGNTCCCCC*QQAGGP Trigger: AGGGCCACCAGCCTGCTGCAAACAACAACAACAACA...TGTGTTGCCAGCTTCTAATTGGAGATTGCCTTCCCACTCAGTGTGAGTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | TTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGTTGTTGTTGTTGTTaGCAGCAGGCTGGTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LLSMLMGNTALLTETHTECCCCC*QQAGGP Trigger: AGGGCCACCAGCCTGCTGCAAACAACAACAACAACA...CTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCAATCTCTTGTGGTTGTTGTTGTaGTTGTTTGCAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: MGNTALLTETHTEWEGNLLWLLL*LFAAGW Trigger: CCAGCCTGCTGCAAACAACAACAACAACAACCACAA...GAGATTGCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCTGGTTGTGGTTGTTGTaGTTGTTGTTTGCAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: MLMGNTALLTETHTEWEGWLWLL*LLFAAG Trigger: GCCTGCTGCAAACAACAACAACAACAACCACAACCA...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ACATTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTTGTTGTTGTTGTTGTTaGCAGCAGGCTGGTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TLLSMLMGNTALLTETHTCCCCC*QQAGGP Trigger: AGGGCCACCAGCCTGCTGCAAACAACAACAACAACA...AGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | CCTGGCACATGGCATGGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGTTGTGGTTGTTGTTGTaGTTGTTTGCAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PGTWHGNNTRLTTNGSLKLWLLL*LFAAGW Trigger: CCAGCCTGCTGCAAACAACAACAACAACAACCACAA...CTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCCATGCCATGTGCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | AACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATGCGAGGTTGTGGTTGTTGTTGTaGTTGTTTGCAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NTRLTTNGSLKACQENARLWLLL*LFAAGW Trigger: CCAGCCTGCTGCAAACAACAACAACAACAACCACAA...CCTCGCATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | AACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATGCGAGGTGGTTGTGGTTGTTGTaGTTGTTGTTTGCAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: NTRLTTNGSLKACQENARWLWLL*LLFAAG Trigger: GCCTGCTGCAAACAACAACAACAACAACCACAACCA...CCTCGCATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | GGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATTCATTCATCTGCCTGTaGGGAATGGCCCATCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GNNTRLTTNGSLKACQENSFICL*GMAHRK Trigger: CTTCCGATGGGCCATTCCCAACAGGCAGATGAATGA...ATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | ATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTGGGAAGGCTTATGGTTGTGGTTGTaGTTGTTGTTGTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: MLMGNTALLTETHTEWEGLWLWL*LLLFAA Trigger: TGCTGCAAACAACAACAACAACAACCACAACCATAA...GCCTTCCCACTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | TTGCTTTCCATGCTAATGGGCAACACTGCACTGTTGACAGAAACTCACACTGAGTTATGGTTGTGGTTGTaGTTGTTGTTGTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LLSMLMGNTALLTETHTELWLWL*LLLFAA Trigger: TGCTGCAAACAACAACAACAACAACCACAACCATAA...CTCAGTGTGAGTTTCTGTCAACAGTGCAGTGTTGCCCATTAGCATGGAAAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | TTATTCAGTTGCTTTATTGACTTGACATTGCTTTCCATGCTAATGGGCAACACTTTGTGGTTGTTGTTGTaGTTGTTTGCAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LFSCFIDLTLLSMLMGNTLWLLL*LFAAGW Trigger: CCAGCCTGCTGCAAACAACAACAACAACAACCACAA...AGTGTTGCCCATTAGCATGGAAAGCAATGTCAAGTCAATAAAGCAACTGAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | GGAAATAACACAAGGCTCACCACAAACGGGTCATTAAAGGCATGTCAGGAAAATTTATGGTTGTGGTTGTaGTTGTTGTTGTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GNNTRLTTNGSLKACQENLWLWL*LLLFAA Trigger: TGCTGCAAACAACAACAACAACAACCACAACCATAA...ATTTTCCTGACATGCCTTTAATGACCCGTTTGTGGTGAGCCTTGTGTTATTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS-3UTR CAA 90 bp | TTATTCAGTTGCTTTATTGACTTGACATTGCTTTCCATGCTAATGGGCAACACTTTATGGTTGTGGTTGTaGTTGTTGTTGTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LFSCFIDLTLLSMLMGNTLWLWL*LLLFAA Trigger: TGCTGCAAACAACAACAACAACAACCACAACCATAA...AGTGTTGCCCATTAGCATGGAAAGCAATGTCAAGTCAATAAAGCAACTGAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CAA 90 bp | CCTCTTCGGTGGTGGTTGTGGTTATGGTTGTGGTTGTTGTTGTTGTaGTTTGCAGCAGGCTGGTGGCCCTCACCTCCTCCCACAGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PLRWWLWLWLWLLLL*FAAGWWPSPPPTGR Trigger: CCGCCCTGTGGGAGGAGGTGAGGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CAA 90 bp | CGAGCCTGGCCTCTTCGGTGGTGGTTGTGGTTATGGTTGTGGTTGTaGTTGTTGTTGTTTGCAGCAGGCTGGTGGCCCTCACCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RAWPLRWWLWLWLWL*LLLFAAGWWPSPPP Trigger: GGGAGGAGGTGAGGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CAA 90 bp | CGGCGAGCCTGGCCTCTTCGGTGGTGGTTGTGGTTATGGTTGTGGTaGTTGTTGTTGTTGTTTGCAGCAGGCTGGTGGCCCTCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RRAWPLRWWLWLWLW*LLLLFAAGWWPSPP Trigger: AGGAGGTGAGGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGCTCGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CAA 90 bp | GCCTGGCCTCTTCGGTGGTGGTTGTGGTTATGGTTGTGGTTGTTGTaGTTGTTGTTTGCAGCAGGCTGGTGGCCCTCACCTCCTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: AWPLRWWLWLWLWLL*LLFAAGWWPSPPPT Trigger: TGTGGGAGGAGGTGAGGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CAA 90 bp | TTCGGTGGTGGTTGTGGTTATGGTTGTGGTTGTTGTTGTTGTTGTTaGCAGCAGGCTGGTGGCCCTCACCTCCTCCCACAGGGCGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FGGGCGYGCGCCCCC*QQAGGPHLLPQGGL Trigger: AAGACCGCCCTGTGGGAGGAGGTGAGGGCCACCAGCCTGCTGCAAACAACAACAACAACAACCACAACCATAACCACAACCACCACCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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| CDS CCA 72 bp | TTAGGGGCAAGTCGGCGAGCCTGGCCTCTTCGGTGGTaGTTGTGGTTATGGTTGTGGTTGTTGTTGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGASRRAWPLRW*LWLWLWLLLLL Trigger: CAACAACAACAACAACCACAACCATAACCACAACCACCACCGAAGAGGCCAGGCTCGCCGACTTGCCCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053540.11 ENSMUST00000113112.2 ENSMUST00000113113.2 ENSMUST00000178632.8 |
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