Pregenerated sensors for BET1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025484Ensembl transcript IDs: ENSMUST00000026557.10, ENSMUST00000209320.2, ENSMUST00000210710.2, ENSMUST00000211527.2, ENSMUST00000211590.2, ENSMUST00000211624.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCTGGACACCTGGCCTTGTGGCCCAGAAGGATCTTAGTCCAGTaGCTCTGGACTGCAGTCCACTCCTCTATCCACGGCTTTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: APGHLALWPRRILVQ*LWTAVHSSIHGFAS Trigger: AGAGGCAAAGCCGTGGATAGAGGAGTGGACTGCAGTCCAGAGGCACTGGACTAAGATCCTTCTGGGCCACAAGGCCAGGTGTCCAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CCA 90 bp | GGACACCTGGCCTTGTGGCCCAGAAGGATCTTAGTCCAGTGCCTCTaGACTGCAGTCCACTCCTCTATCCACGGCTTTGCCTCTTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: GHLALWPRRILVQCL*TAVHSSIHGFASCQ Trigger: CTGGCAAGAGGCAAAGCCGTGGATAGAGGAGTGGACTGCAGTCCAGAGGCACTGGACTAAGATCCTTCTGGGCCACAAGGCCAGGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CCA 90 bp | GCCCTTAAGATCCTGGCTTCTGAGGAGTGTGGCCGATGGCCACAGTaGGCCCATTTGGGACTCACAGATGCTTTGCATAGACCTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: ALKILASEECGRWPQ*AHLGLTDALHRPGL Trigger: CAAGCCAGGTCTATGCAAAGCATCTGTGAGTCCCAAATGGGCCCACTGTGGCCATCGGCCACACTCCTCAGAAGCCAGGATCTTAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CCA 90 bp | TATGCAACGAGGAGGTGGCTCAATCTCCCTCACACCGAGGGAGACTaGCTGTACAGGGTAGGGCAAGGTTCAGTACAAGGTCAAAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: YATRRWLNLPHTEGD*LYRVGQGSVQGQKL Trigger: GAGCTTTTGACCTTGTACTGAACCTTGCCCTACCCTGTACAGCCAGTCTCCCTCGGTGTGAGGGAGATTGAGCCACCTCCTCGTTGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR TCA 90 bp | GCTTTTGCCTTTTTCTTCTTCCTTCATACACAGGACAAGCCAAGATaGGCTCATTATGACAGAGGCAGCTGCAGTCGTCCTGACTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: AFAFFFFLHTQDKPR*AHYDRGSCSRPDLG Trigger: TCCTAAGTCAGGACGACTGCAGCTGCCTCTGTCATAATGAGCTCATCTTGGCTTGTCCTGTGTATGAAGGAAGAAGAAAAAGGCAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGCCTCTTGCCAGTGACTGGTGGGTACAGCCTGCCCAGGTCCACTCCTCACAGCTGCAGTCGTCCTaGCTTAGGAAGATGAATGAC | + |
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Preference number: 2 (lower is better) Translates to: ALPLASDWWVQPAQVHSSQLQSS*LRKMND Trigger: GTCATTCATCTTCCTAAGTCAGGACGACTGCAGCTG...TGAGGAGTGGACCTGGGCAGGCTGTACCCACCAGTCACTGGCAAGAGGCAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CAA 90 bp | CGGTTCTGGTCCTCTGTGTCCCTGTCGATGTCCAAAGCCAGCTGGTaGGGATACAGAAGGCACCGTCAAGCAAAGCCACAGAGAGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: RFWSSVSLSMSKASW*GYRRHRQAKPQRVV Trigger: CACTACTCTCTGTGGCTTTGCTTGACGGTGCCTTCTGTATCCCAACCAGCTGGCTTTGGACATCGACAGGGACACAGAGGACCAGAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209320.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGGCTGTACAGGGTAGGGCAAGGTTCAGTACAAGGTCAAAAGCTCCCACTAAGCACGGCCTGGCTCTaGAAAGCCACCTGGTACAGC | + |
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Preference number: 2 (lower is better) Translates to: DWLYRVGQGSVQGQKLPLSTAWL*KATWYS Trigger: GCTGTACCAGGTGGCTTTTCAGAGCCAGGCCGTGCT...TAGTGGGAGCTTTTGACCTTGTACTGAACCTTGCCCTACCCTGTACAGCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCCACAGGTCGATTTATGTGCAAATGGGGCTGGCCAAGGCAGCAGGGAGGTTTAGCACCAGGGAGTaGCATTGGCTTTTGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: QPHRSIYVQMGLAKAAGRFSTRE*HWLLPF Trigger: AAAAGGCAAAAGCCAATGCCACTCCCTGGTGCTAAA...CCTCCCTGCTGCCTTGGCCAGCCCCATTTGCACATAAATCGACCTGTGGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR-3UTR TCA 90 bp | CACCGAGGGAGACTGGCTGTACAGGGTAGGGCAAGGTTCAGTACAAGGTCAAAAAAGATGAGCTCATTATaGCAGAGGCAGCTGCAGTCG | + |
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Preference number: 2 (lower is better) Translates to: HRGRLAVQGRARFSTRSKKMSSL*QRQLQS Trigger: CGACTGCAGCTGCCTCTGTCATAATGAGCTCATCTT...TTTTGACCTTGTACTGAACCTTGCCCTACCCTGTACAGCCAGTCTCCCTCGGTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CAA 90 bp | TCTGGCTCTGCCAGTGTCTTTAGCACCAGGGAGTGGCATTGGCTTTaGCCTTTTTCTTCTTCCTTCATACACAGGACAAGCCAAGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: SGSASVFSTREWHWL*PFSSSFIHRTSQDE Trigger: CTCATCTTGGCTTGTCCTGTGTATGAAGGAAGAAGAAAAAGGCAAAAGCCAATGCCACTCCCTGGTGCTAAAGACACTGGCAGAGCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCTCACGGCCATATTCCCTTCTGGTGTCAGTTTCAGACTCTTCAAGGACAACCAGGGAGTGGCATTaGCTTTTGCCTTTTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: EGSRPYSLLVSVSDSSRTTREWH*LLPFSS Trigger: AGAAGAAAAAGGCAAAAGCCAATGCCACTCCCTGGT...TGTCCTTGAAGAGTCTGAAACTGACACCAGAAGGGAATATGGCCGTGAGCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CAA 90 bp | ACCTGGTACAGCTCTCTGTCTGTCTGTCTGGGGATGGAGACATCTTaGACACTGATAAGATTCTCAATCCCAAGGACACACACATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TWYSSLSVCLGMETS*TLIRFSIPRTHTSV Trigger: CACAGATGTGTGTGTCCTTGGGATTGAGAATCTTATCAGTGTCAAAGATGTCTCCATCCCCAGACAGACAGACAGAGAGCTGTACCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR TCA 72 bp | GTCCACTCCTCTATCCACGGCTTTGCCTCTTGCCAGTaGCTGGTGGGTACAGCCTGCCCAGGTCCACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VHSSIHGFASCQ*LVGTACPGPLL Trigger: GAGGAGTGGACCTGGGCAGGCTGTACCCACCAGTCACTGGCAAGAGGCAAAGCCGTGGATAGAGGAGTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR TCA 72 bp | CCCCAGCAGAGAGAGCACCCCAGCACGGCCTGGCTCTaGAAAGCCACCTGGTACAGCTCTCTGTCTGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: PQQREHPSTAWL*KATWYSSLSVC Trigger: ACAGACAGACAGAGAGCTGTACCAGGTGGCTTTTCAGAGCCAGGCCGTGCTGGGGTGCTCTCTCTGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR TCA 72 bp | GGCAGCAGGGAGGGCCGGCAGAGCAGGCAAGTCTGTTaGGTTATGCAACGAGGAGGTGGCTCAATCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GSREGRQSRQVC*VMQRGGGSISL Trigger: GAGGGAGATTGAGCCACCTCCTCGTTGCATAACTCAACAGACTTGCCTGCTCTGCCGGCCCTCCCTGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CCA 72 bp | ACTCCTCTATCCACGGCTTTGCCTCTTGCCAGTGACTaGTGGGTACAGCCTGCCCAGGTCCACTCCTCATCA | + |
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Preference number: 3 (lower is better) Translates to: TPLSTALPLASD*WVQPAQVHSSS Trigger: TGATGAGGAGTGGACCTGGGCAGGCTGTACCCACCAGTCACTGGCAAGAGGCAAAGCCGTGGATAGAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CCA 72 bp | GCCTTGTGGCCCAGAAGGATCTTAGTCCAGTGCCTCTaGACTGCAGTCCACTCCTCTATCCACGGCTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ALWPRRILVQCL*TAVHSSIHGFA Trigger: GGCAAAGCCGTGGATAGAGGAGTGGACTGCAGTCCAGAGGCACTGGACTAAGATCCTTCTGGGCCACAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR CCA 72 bp | TGGTCCTCTGTGTCCCTGTCGATGTCCAAAGCCAGCTaGTTGGGATACAGAAGGCACCGTCAAGCAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: WSSVSLSMSKAS*LGYRRHRQAKP Trigger: TGGCTTTGCTTGACGGTGCCTTCTGTATCCCAACCAGCTGGCTTTGGACATCGACAGGGACACAGAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209320.2 |
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| 3UTR TCA 72 bp | ATTTGGGACTCACAGATGCTTTGCATAGACCTGGCTTaGTCTCACACAACATGGCTCTGGCTCTGCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: IWDSQMLCIDLA*SHTTWLWLCQC Trigger: ACACTGGCAGAGCCAGAGCCATGTTGTGTGAGATCAAGCCAGGTCTATGCAAAGCATCTGTGAGTCCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| 3UTR TCA 72 bp | TTTTTCTTCTTCCTTCATACACAGGACAAGCCAAGATaGGCTCATTATGACAGAGGCAGCTGCAGTCGTCCT | + |
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Preference number: 3 (lower is better) Translates to: FFFFLHTQDKPR*AHYDRGSCSRP Trigger: AGGACGACTGCAGCTGCCTCTGTCATAATGAGCTCATCTTGGCTTGTCCTGTGTATGAAGGAAGAAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR GCA 90 bp | ATCCTGGCTTCTGAGGAGTGTGGCCGATGGCCACAGTGGGCCCATTTGGGACTCGTCTCGCCCAGACCGTaGCATCGTGGAGAAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: ILASEECGRWPQWAHLGLVSPRP*HRGEAL Trigger: AAGCGCTTCTCCACGATGGCACGGTCTGGGCGAGAC...GAGTCCCAAATGGGCCCACTGTGGCCATCGGCCACACTCCTCAGAAGCCAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR TCA 90 bp | AGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCCCTTGGCTGCTTCACACTCCCCGTaGGTAGGCCAGTCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: RSLGNQDARCTRAWLPLAASHSP*VGQSHL Trigger: CAAGTGTGACTGGCCTACTCACGGGGAGTGTGAAGC...AGCCAAGGGCAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| CDS-3UTR CCA 90 bp | TTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCCCTTGGCTCCCACTCAGACCGTGCCATCGTaGAGAAGCGCTTCACACTCC | + |
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Preference number: 4 (lower is better) Translates to: LGNQDARCTRAWLPLAPTQTVPS*RSASHS Trigger: GGAGTGTGAAGCGCTTCTCCACGATGGCACGGTCTG...AGTGGGAGCCAAGGGCAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| 3UTR CAA 72 bp | ACACACATCTGTGCCTGTGCTCCTGGACACCTGGCCTaGTGGCCCAGAAGGATCTTAGTCCAGTGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: THICACAPGHLA*WPRRILVQCLW Trigger: CCAGAGGCACTGGACTAAGATCCTTCTGGGCCACAAGGCCAGGTGTCCAGGAGCACAGGCACAGATGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR CCA 90 bp | TGTAGTCAGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCCCAGACCGTGCCATCGTaGAGAAGCGCTTCACACTCC | + |
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Preference number: 4 (lower is better) Translates to: CSQVLRKPGCQVYKSLAAQTVPS*RSASHS Trigger: GGAGTGTGAAGCGCTTCTCCACGATGGCACGGTCTG...GGCAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCTGACTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| CDS-3UTR GCA 90 bp | TTTGTAGTCAGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGGTCTCGCCCAGACCGTaGCATCGTGGAGAAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: FVVRSLGNQDARCTRAWLVSPRP*HRGEAL Trigger: AAGCGCTTCTCCACGATGGCACGGTCTGGGCGAGAC...CAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCTGACTACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCCCTTGGCTCCAGAGGTAGGAGAGGATaGAGAAGGCCACGATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: VLRKPGCQVYKSLAALGSRGRRG*RRPRLR Trigger: TCTTAATCGTGGCCTTCTTCATCCTCTCCTACCTCT...GGAGCCAAGGGCAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| CDS-3UTR TCA 90 bp | TTTTGTAGTCAGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCTTCACACTCCCCGTaGGTAGGCCAGTCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: FCSQVLRKPGCQVYKSLAASHSP*VGQSHL Trigger: CAAGTGTGACTGGCCTACTCACGGGGAGTGTGAAGC...AGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCTGACTACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| 3UTR CAA 72 bp | CATTTGGGACTCACAGATGCTTTGCATAGACCTGGCTaGATCTCACACAACATGGCTCTGGCTCTGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HLGLTDALHRPG*ISHNMALALPV Trigger: CACTGGCAGAGCCAGAGCCATGTTGTGTGAGATCAAGCCAGGTCTATGCAAAGCATCTGTGAGTCCCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR TCA 90 bp | TTTTGTAGTCAGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTAGAGGTAGGAGAGGATaGAGAAGGCCACGATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: FCSQVLRKPGCQVYKSLARGRRG*RRPRLR Trigger: TCTTAATCGTGGCCTTCTTCATCCTCTCCTACCTCT...AGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCTGACTACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| 3UTR CAA 72 bp | GCCAGTGTCTTTAGCACCAGGGAGTGGCATTGGCTTTaGCCTTTTTCTTCTTCCTTCATACACAGGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: ASVFSTREWHWL*PFSSSFIHRTS Trigger: GCTTGTCCTGTGTATGAAGGAAGAAGAAAAAGGCAAAAGCCAATGCCACTCCCTGGTGCTAAAGACACTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR CAA 90 bp | GCTTTGCCTCTTGCCAGTGACTGGTGGGTACAGCCTGCCCAGGTCCACTCCTCACACAGAAGCTTCCGGTaGTCTCGCCCAGACCGTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALPLASDWWVQPAQVHSSHRSFR*SRPDRA Trigger: GGCACGGTCTGGGCGAGACAACCGGAAGCTTCTGTG...TGAGGAGTGGACCTGGGCAGGCTGTACCCACCAGTCACTGGCAAGAGGCAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR CAA 90 bp | AGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCCCTTGGCTCACAGAAGCTTCCGGTaGTCTCGCCCAGACCGTGCC | + |
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Preference number: 5 (lower is better) Translates to: RSLGNQDARCTRAWLPLAHRSFR*SRPDRA Trigger: GGCACGGTCTGGGCGAGACAACCGGAAGCTTCTGTG...AGCCAAGGGCAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| CDS-3UTR CAA 90 bp | GTCAGGTCCTTAGGAAACCAGGATGCCAGGTGTACAAGAGCCTGGCTGCCCTTGTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VRSLGNQDARCTRAWLPLLSLVT*EARLSA Trigger: GGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAA...CAAGGGCAGCCAGGCTCTTGTACACCTGGCATCCTGGTTTCCTAAGGACCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000211624.2 |
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| CDS-3UTR CAA 90 bp | GTTGGGATACAGAAGGCACCGTCAAGCAAAGCCACAGAGAGTAGTGCCCACCTTTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VGIQKAPSSKATESSAHLLSLVT*EARLSA Trigger: GGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAA...AAGGTGGGCACTACTCTCTGTGGCTTTGCTTGACGGTGCCTTCTGTATCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209320.2 |
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| CDS-3UTR CAA 90 bp | GACTGGCTGTACAGGGTAGGGCAAGGTTCAGTACAAGGTCAAAAGCTCCCACTATTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: DWLYRVGQGSVQGQKLPLLSLVT*EARLSA Trigger: GGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAA...TAGTGGGAGCTTTTGACCTTGTACTGAACCTTGCCCTACCCTGTACAGCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS TCA 90 bp | TCCCACTGGCTCACGTCCTTGTCCTCGACAAGAGGTAGGAGAGGATaGAGAAGGCCACGATTAAGACCACAGCCATACCACACAGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SHWLTSLSSTRGRRG*RRPRLRPQPYHTEA Trigger: AGCTTCTGTGTGGTATGGCTGTGGTCTTAATCGTGGCCTTCTTCATCCTCTCCTACCTCTTGTCGAGGACAAGGACGTGAGCCAGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211590.2 |
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| CDS-3UTR CAA 90 bp | CACCGAGGGAGACTGGCTGTACAGGGTAGGGCAAGGTTCAGTACAAGGTCAAAACTGTCAGCCATCCGCTaGTTCTCTCTGTCCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: HRGRLAVQGRARFSTRSKLSAIR*FSLSRM Trigger: CATTCTGGACAGAGAGAACAAGCGGATGGCTGACAG...TTTTGACCTTGTACTGAACCTTGCCCTACCCTGTACAGCCAGTCTCCCTCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026557.10 |
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| CDS-3UTR CAA 90 bp | CTAAGTAACGGTTCTGGTCCTCTGTGTCCCTGTCGATGTCCAAAGCCAGCTGGTCTGTCAGCCATCCGCTaGTTCTCTCTGTCCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: LSNGSGPLCPCRCPKPAGLSAIR*FSLSRM Trigger: CATTCTGGACAGAGAGAACAAGCGGATGGCTGACAG...ACCAGCTGGCTTTGGACATCGACAGGGACACAGAGGACCAGAACCGTTACTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209320.2 |
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| CDS GCA 72 bp | ACCACACAGAAGCTTCCGGTTGTCTCGCCCAGACCGTaGCATCGTGGAGAAGCGCTTCACACTCCCCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TTQKLPVVSPRP*HRGEALHTPRE Trigger: CTCACGGGGAGTGTGAAGCGCTTCTCCACGATGGCACGGTCTGGGCGAGACAACCGGAAGCTTCTGTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026557.10 ENSMUST00000211527.2 ENSMUST00000211590.2 ENSMUST00000211624.2 |
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| CDS CAA 90 bp | GTGTCCCTGTCGATGTCCAAAGCCAGCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCTCTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VSLSMSKASDLSLVT*EARLSAIRLFSLSR Trigger: TCTGGACAGAGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGCTGGCTTTGGACATCGACAGGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000210710.2 |
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| CDS CAA 90 bp | AAGGCCACGATTAAGACCACAGCCATACCACACAGAAGCTTCCGGTaGTCTCGCCCAGACCGTGCCATCGTGGAGAAGCGCTTCACACTC | + |
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Preference number: 6 (lower is better) Translates to: KATIKTTAIPHRSFR*SRPDRAIVEKRFTL Trigger: GAGTGTGAAGCGCTTCTCCACGATGGCACGGTCTGGGCGAGACAACCGGAAGCTTCTGTGTGGTATGGCTGTGGTCTTAATCGTGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026557.10 ENSMUST00000211527.2 ENSMUST00000211590.2 ENSMUST00000211624.2 |
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| CDS CAA 72 bp | ATTAAGACCACAGCCATACCACACAGAAGCTTCCGGTaGTCTCGCCCAGACCGTGCCATCGTGGAGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: IKTTAIPHRSFR*SRPDRAIVEKR Trigger: GCGCTTCTCCACGATGGCACGGTCTGGGCGAGACAACCGGAAGCTTCTGTGTGGTATGGCTGTGGTCTTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026557.10 ENSMUST00000211527.2 ENSMUST00000211590.2 ENSMUST00000211624.2 |
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| CDS CAA 72 bp | TCTGGTCCTCTGTGTCCCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGPLCPDLSLVT*EARLSAIRLFS Trigger: AGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGGGACACAGAGGACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211590.2 |
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| CDS CAA 90 bp | AGTAACGGTTCTGGTCCTCTGTGTCCCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCTCTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SNGSGPLCPDLSLVT*EARLSAIRLFSLSR Trigger: TCTGGACAGAGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGGGACACAGAGGACCAGAACCGTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211590.2 |
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| CDS CAA 72 bp | TCGATGTCCAAAGCCAGCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SMSKASDLSLVT*EARLSAIRLFS Trigger: AGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGCTGGCTTTGGACATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026557.10 ENSMUST00000210710.2 |
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| CDS CAA 90 bp | CCAGTCACACTTGTGAAATCTGAGTCCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCTCTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PVTLVKSESDLSLVT*EARLSAIRLFSLSR Trigger: TCTGGACAGAGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGGACTCAGATTTCACAAGTGTGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211527.2 |
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| CDS CAA 72 bp | CTTGTGAAATCTGAGTCCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LVKSESDLSLVT*EARLSAIRLFS Trigger: AGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGGACTCAGATTTCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211527.2 |
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| CDS CAA 72 bp | CCTATTACCAGAGAAAGCGATTTAAGCCTGGTCACCTaGGAGGCCAGGCTGTCAGCCATCCGCTTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PITRESDLSLVT*EARLSAIRLFS Trigger: AGAGAACAAGCGGATGGCTGACAGCCTGGCCTCCAAGGTGACCAGGCTTAAATCGCTTTCTCTGGTAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209320.2 |
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