Pregenerated sensors for BET1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032757

Ensembl transcript IDs: ENSMUST00000049166.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	ATGCAACCTCCCCCAAAGGCTGACCCAGCTTCTCTGGTATTCGTCTaGTCTCCCACTTGCTTTAGAAAGTTACACTTATGGAACAGCAAG	+
Preference number: 1 (lower is better) Translates to: MQPPPKADPASLVFV*SPTCFRKLHLWNSK Trigger: CTTGCTGTTCCATAAGTGTAACTTTCTAAAGCAAGTGGGAGAGCAGACGAATACCAGAGAAGCTGGGTCAGCCTTTGGGGGAGGTTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR CCA 90 bp	TCTCTCCCATCATGCAACCTCCCCCAAAGGCTGACCCAGCTTCTCTaGTATTCGTCTGCTCTCCCACTTGCTTTAGAAAGTTACACTTAT	+
Preference number: 1 (lower is better) Translates to: SLPSCNLPQRLTQLL*YSSALPLALESYTY Trigger: ATAAGTGTAACTTTCTAAAGCAAGTGGGAGAGCAGACGAATACCAGAGAAGCTGGGTCAGCCTTTGGGGGAGGTTGCATGATGGGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR-3UTR GCA 90 bp	AAACAAAGGAAAGCGAGCTCTCTCCCATCATGCAACCTCCCCCAAAGGCTGACCCCCCAAGACATTAAATaGAACAAATTCAAAGCCCAC	+
Preference number: 2 (lower is better) Translates to: KQRKASSLPSCNLPQRLTPQDIK*NKFKAH Trigger: GTGGGCTTTGAATTTGTTGCATTTAATGTCTTGGGG...GGTCAGCCTTTGGGGGAGGTTGCATGATGGGAGAGAGCTCGCTTTCCTTTGTTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR-3UTR CCA 90 bp	GCTCTCCCACTTGCTTTAGAAAGTTACACTTATGGAACAGCAAGGTATGGTAGTCATATTTACTCTGTCTaGGAAACCCTGGAAAAACAT	+
Preference number: 2 (lower is better) Translates to: ALPLALESYTYGTARYGSHIYSV*ETLEKH Trigger: ATGTTTTTCCAGGGTTTCCCAGACAGAGTAAATATG...ACTACCATACCTTGCTGTTCCATAAGTGTAACTTTCTAAAGCAAGTGGGAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR TCA 72 bp	CGAGCTCTCTCCCATCATGCAACCTCCCCCAAAGGCTaGCCCAGCTTCTCTGGTATTCGTCTGCTCTCCCAC	+
Preference number: 3 (lower is better) Translates to: RALSHHATSPKG*PSFSGIRLLSH Trigger: GTGGGAGAGCAGACGAATACCAGAGAAGCTGGGTCAGCCTTTGGGGGAGGTTGCATGATGGGAGAGAGCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR GCA 72 bp	GACATCAAACAAAGGAAAGCGAGCTCTCTCCCATCATaGAACCTCCCCCAAAGGCTGACCCAGCTTCTCTGG	+
Preference number: 3 (lower is better) Translates to: DIKQRKASSLPS*NLPQRLTQLLW Trigger: CCAGAGAAGCTGGGTCAGCCTTTGGGGGAGGTTGCATGATGGGAGAGAGCTCGCTTTCCTTTGTTTGATGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR TCA 72 bp	CATGGTACCCAGCAAAGGAGCATGCCATCACAAGGATaGCATCAAACAAAGGAAAGCGAGCTCTCTCCCATC	+
Preference number: 3 (lower is better) Translates to: HGTQQRSMPSQG*HQTKESELSPI Trigger: GATGGGAGAGAGCTCGCTTTCCTTTGTTTGATGTCATCCTTGTGATGGCATGCTCCTTTGCTGGGTACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR GCA 72 bp	CCCCCAAAGGCTGACCCAGCTTCTCTGGTATTCGTCTaGTCTCCCACTTGCTTTAGAAAGTTACACTTATGG	+
Preference number: 3 (lower is better) Translates to: PPKADPASLVFV*SPTCFRKLHLW Trigger: CCATAAGTGTAACTTTCTAAAGCAAGTGGGAGAGCAGACGAATACCAGAGAAGCTGGGTCAGCCTTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049166.5
3UTR GCA 72 bp	GACCCAGCTTCTCTGGTATTCGTCTGCTCTCCCACTTaGTTTAGAAAGTTACACTTATGGAACAGCAAGGTA	+
Preference number: 3 (lower is better) Translates to: DPASLVFVCSPT*FRKLHLWNSKV Trigger: TACCTTGCTGTTCCATAAGTGTAACTTTCTAAAGCAAGTGGGAGAGCAGACGAATACCAGAGAAGCTGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049166.5