Pregenerated sensors for BEND6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042182Ensembl transcript IDs: ENSMUST00000062289.11, ENSMUST00000115161.8, ENSMUST00000129464.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCATGCAGCTTCAGCCAGTCCATTACTCCACCAGGAAAGCCATaGCTACTACAGCCAGTCCTTGATGTGTCTCAAGTTCTCCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SACSFSQSITPPGKP*LLQPVLDVSQVLQQ Trigger: TTGCTGGAGAACTTGAGACACATCAAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGGAGTAATGGACTGGCTGAAGCTGCATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR TCA 90 bp | AATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTaGTGCACACCATTAATCCCAGAACTTTGGAGGCAGAGGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: NVTLHTQEAEVCWAW*CTPLIPELWRQRQV Trigger: CACCTGCCTCTGCCTCCAAAGTTCTGGGATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR GCA 90 bp | GCTTGTTTGACAGACATTCTCTGGTTAATTAGTAAGGGCTCTGCATaGAGCTTCAGCCAGTCCATTACTCCACCAGGAAAGCCATGGCTA | + |
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Preference number: 1 (lower is better) Translates to: ACLTDILWLISKGSA*SFSQSITPPGKPWL Trigger: TAGCCATGGCTTTCCTGGTGGAGTAATGGACTGGCTGAAGCTGCATGCAGAGCCCTTACTAATTAACCAGAGAATGTCTGTCAAACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAACCACCAGGAAAGCCATaGCTACTACAGCCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VSSRITRVTQRSPVSEGKPPGKP*LLQPVL Trigger: AAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGG...TTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGAGGCAGAGGCAGGTaGATCTCTGAGTGTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SQASMSRYTLKKQRFAGHGGRGR*ISECEP Trigger: GGGCTCACACTCAGAGATCCACCTGCCTCTGCCTCC...ATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGTCTGAGTGTGAGCCCTaGCTGGTCTACAGAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVSECEP*LVYRVS Trigger: GCTCACTCTGTAGACCAGGCAGGGCTCACACTCAGA...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | GTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCACACCATTAATCCACCAGGAAAGCCATaGCTACTACAGCCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VTHSRSRGLLGMVMHTINPPGKP*LLQPVL Trigger: AAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGG...ATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCACACCAGACAACGACTGATCTaGAGGGTGGATGTTTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CHVTHSRSRGLLGMVMHTRQRLI*RVDVCV Trigger: AACACAAACATCCACCCTCCAGATCAGTCGTTGTCT...GGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGAGACAACGACTGATCTaGAGGGTGGATGTTTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LGPLHCTLKSSFPSFNVTRQRLI*RVDVCV Trigger: AACACAAACATCCACCCTCCAGATCAGTCGTTGTCT...CGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR CAA 90 bp | CTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTaGCTGGGCATGGTGATGCACACCATTAATCCCAGAACTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LPKLQCHVTHSRSRG*LGMVMHTINPRTLE Trigger: CTCCAAAGTTCTGGGATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAGCAAATTCCAATGTTTaGCGGAAAACCAAGCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSSRITRVTQRSPVSEGKANSNV*RKTKHV Trigger: AACATGCTTGGTTTTCCGTCAAACATTGGAATTTGC...TTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAGCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTAGTATGTTCTGGACAATaGATACCGAGGGGTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GPLHCTLKSSFPSFNVTLVCSGQ*IPRGVS Trigger: AGACACACCCCTCGGTATCCATTGTCCAGAACATAC...TAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTATTAATCCCAGAACTTTaGAGGCAGAGGCAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GPLHCTLKSSFPSFNVTLLIPEL*RQRQVD Trigger: ATCCACCTGCCTCTGCCTCCAAAGTTCTGGGATTAA...TAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGCAAATTCCAATGTTTaGCGGAAAACCAAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: PGSPALHFKILLPKLQCHANSNV*RKTKHV Trigger: AACATGCTTGGTTTTCCGTCAAACATTGGAATTTGC...GTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAACTATTAACCAAGCAGCCTGTACAGTGTAGTCCCTGGGTCCCCTGCACTGCATGTTGGGATAACTaGATACGGAAAAGGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: TELLTKQPVQCSPWVPCTACWDN*IRKRHL Trigger: TAAATGCCTTTTCCGTATTCAGTTATCCCAACATGC...AGTGCAGGGGACCCAGGGACTACACTGTACAGGCTGCTTGGTTAATAGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGTATTCTTACCAAACAGGAGCTTGCTAAAGCCCCTCCCCACCAAACAAAACCACCAGGAAAGCCATaGCTACTACAGCCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NCILTKQELAKAPPHQTKPPGKP*LLQPVL Trigger: AAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGG...TTTTGTTTGGTGGGGAGGGGCTTTAGCAAGCTCCTGTTTGGTAAGAATACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCAGCCTGTACAGTGTAGTCCCTGGGTCCCCTGCACTGCACTTTAAAATCTTGACAGACATTCTCTaGTTAATTAGTAAGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSSLYSVVPGSPALHFKILTDIL*LISKGS Trigger: AGAGCCCTTACTAATTAACCAGAGAATGTCTGTCAA...GATTTTAAAGTGCAGTGCAGGGGACCCAGGGACTACACTGTACAGGCTGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTATTTGTTTTGTACAACTGAACTATTAACCAAGCAGCCTGTACAGTGTAGTGGAGGCAGAGGCAGGTaGATCTCTGAGTGTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: EYLFCTTELLTKQPVQCSGGRGR*ISECEP Trigger: GGGCTCACACTCAGAGATCCACCTGCCTCTGCCTCC...ACTACACTGTACAGGCTGCTTGGTTAATAGTTCAGTTGTACAAAACAAATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAGGAAGAGAAACCATATTGCATaGTTGTTTGACAGACATTCT | + |
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Preference number: 2 (lower is better) Translates to: LQDNQGYTEKPCLRGERKRNHIA*LFDRHS Trigger: AGAATGTCTGTCAAACAAGCATGCAATATGGTTTCT...CTTCCTTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCAAAGTATTCGGGGCTGTaGAAGATGCATATTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: SMSRYTLKKQRFAGHGDAKYSGL*KMHISK Trigger: TTTGGAAATATGCATCTTTCACAGCCCCGAATACTT...TGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGAAGTATTCGGGGCTGTaGAAGATGCATATTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVKYSGL*KMHISK Trigger: TTTGGAAATATGCATCTTTCACAGCCCCGAATACTT...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACGCATGTTGGGATAACTaGATACGGAAAAGGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: PLHCTLKSSFPSFNVTLHACWDN*IRKRHL Trigger: TAAATGCCTTTTCCGTATTCAGTTATCCCAACATGC...GTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCAGCATGTTGGGATAACTaGATACGGAAAAGGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: SMSRYTLKKQRFAGHGDAACWDN*IRKRHL Trigger: TAAATGCCTTTTCCGTATTCAGTTATCCCAACATGC...TGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCAGGACCTTTTATGAAGTaGGAAGTCTTTGAAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: SMSRYTLKKQRFAGHGDAGPFMK*EVFEEC Trigger: ACATTCTTCAAAGACTTCTCACTTCATAAAAGGTCC...TGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGTGGGGAGAAAAAGAGAAAGGCATAGCTTCTCATTGCAAAGTAGTCAGGGGAGAAACCATATTGCATaGTTGTTTGACAGACATTCT | + |
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Preference number: 2 (lower is better) Translates to: GVGRKRERHSFSLQSSQGRNHIA*LFDRHS Trigger: AGAATGTCTGTCAAACAAGCATGCAATATGGTTTCT...CCCCTGACTACTTTGCAATGAGAAGCTATGCCTTTCTCTTTTTCTCCCCACGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGTTGACAGACATTCTCTaGTTAATTAGTAAGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVLTDIL*LISKGS Trigger: AGAGCCCTTACTAATTAACCAGAGAATGTCTGTCAA...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGTATGTTCTGGACAATaGATACCGAGGGGTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FKILLPKLQCHVTHSRSRVCSGQ*IPRGVS Trigger: AGACACACCCCTCGGTATCCATTGTCCAGAACATAC...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCTTCTCATTGCAAAGTAGTCAGGGGACCTTTTATGAAGTGAGAAGTCTTAGACAACGACTGATCTaGAGGGTGGATGTTTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: HSFSLQSSQGTFYEVRSLRQRLI*RVDVCV Trigger: AACACAAACATCCACCCTCCAGATCAGTCGTTGTCT...AAGACTTCTCACTTCATAAAAGGTCCCCTGACTACTTTGCAATGAGAAGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | AATTGTATTCTTACCAAACAGGAGCTTGCTAAAGCCCCTCCCCACCAAACAAAAGCAAATTCCAATGTTTaGCGGAAAACCAAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: NCILTKQELAKAPPHQTKANSNV*RKTKHV Trigger: AACATGCTTGGTTTTCCGTCAAACATTGGAATTTGC...TTTTGTTTGGTGGGGAGGGGCTTTAGCAAGCTCCTGTTTGGTAAGAATACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTATTTGTTTTGTACAACTGAACTATTAACCAAGCAGCCTGTACAGTGTAGTTCAGGGGACCTTTTATaGAGTGAGAAGTCTTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: EYLFCTTELLTKQPVQCSSGDLL*SEKSLK Trigger: CTTCAAAGACTTCTCACTTCATAAAAGGTCCCCTGA...ACTACACTGTACAGGCTGCTTGGTTAATAGTTCAGTTGTACAAAACAAATACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR GCA 90 bp | AACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTATTGGTAGACGTAGAAACCATATTGCATaGTTGTTTGACAGACATTCT | + |
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Preference number: 2 (lower is better) Translates to: NGLTLSHHYLVSHGIGRRRNHIA*LFDRHS Trigger: AGAATGTCTGTCAAACAAGCATGCAATATGGTTTCT...ACGTCTACCAATACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCAGCCTGTACAGTGTAGTCCCTGGGTCCCCTGCACTGCACTTTAAAATCCTGGAGGGTGGATGTTaGTGTTGCTATGACAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PSSLYSVVPGSPALHFKILEGGC*CCYDKS Trigger: GCTCTTGTCATAGCAACACAAACATCCACCCTCCAG...GATTTTAAAGTGCAGTGCAGGGGACCCAGGGACTACACTGTACAGGCTGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAGGAAGAGGCATAGCTTCTCATaGCAAAGTAGTCAGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: LQDNQGYTEKPCLRGERKRHSFS*QSSQGT Trigger: GGTCCCCTGACTACTTTGCAATGAGAAGCTATGCCT...CTTCCTTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | GGCGTGGGGAGAAAAAGAGAAAGGCATAGCTTCTCATTGCAAAGTAGTCAGGGGCTGGAGGGTGGATGTTaGTGTTGCTATGACAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: GVGRKRERHSFSLQSSQGLEGGC*CCYDKS Trigger: GCTCTTGTCATAGCAACACAAACATCCACCCTCCAG...CCCCTGACTACTTTGCAATGAGAAGCTATGCCTTTCTCTTTTTCTCCCCACGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACTCAAGAAGCAGAGGTTaGCTGGGCATGGTGATGCAC | + |
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Preference number: 3 (lower is better) Translates to: PLHCTLKSSFPSFNVTLHSRSRG*LGMVMH Trigger: GTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGA...GTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR CCA 72 bp | AGCTTCAGCCAGTCCATTACTCCACCAGGAAAGCCATaGCTACTACAGCCAGTCCTTGATGTGTCTCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SFSQSITPPGKP*LLQPVLDVSQV Trigger: AACTTGAGACACATCAAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGGAGTAATGGACTGGCTGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTATACTACAGCCAGTCCTaGATGTGTCTCAAGTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: GPLHCTLKSSFPSFNVTLYYSQS*MCLKFS Trigger: GGAGAACTTGAGACACATCAAGGACTGGCTGTAGTA...TAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGTACTACAGCCAGTCCTaGATGTGTCTCAAGTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LLPKLQCHVTHSRSRGLLYYSQS*MCLKFS Trigger: GGAGAACTTGAGACACATCAAGGACTGGCTGTAGTA...CAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAAACCATATTGCATGCTaGTTTGACAGACATTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: VSSRITRVTQRSPVSEGKNHIAC*FDRHSL Trigger: CAGAGAATGTCTGTCAAACAAGCATGCAATATGGTT...TTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAGCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | GTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCACACCATTAATAGGCATAGCTTCTCATaGCAAAGTAGTCAGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: VTHSRSRGLLGMVMHTINRHSFS*QSSQGT Trigger: GGTCCCCTGACTACTTTGCAATGAGAAGCTATGCCT...ATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAGGAATATTGCATGCTTGTTaGACAGACATTCTCTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: SSRITRVTQRSPVSEGKGILHAC*TDILWL Trigger: TAACCAGAGAATGTCTGTCAAACAAGCATGCAATAT...TCCTTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAATATTGCATGCTTGTTaGACAGACATTCTCTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VSSRITRVTQRSPVSEGKILHAC*TDILWL Trigger: TAACCAGAGAATGTCTGTCAAACAAGCATGCAATAT...TTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAGGAAGAATTTGAAGTGTTTGTaGAAGACAACGACTGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQDNQGYTEKPCLRGERKNLKCL*KTTTDL Trigger: CAGATCAGTCGTTGTCTTCAACAAACACTTCAAATT...CTTCCTTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR TCA 72 bp | TCCACCAGGAAAGCCATGGCTACTACAGCCAGTCCTTaGTGTGTCTCAAGTTCTCCAGCAAATTCCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: STRKAMATTASP*CVSSSPANSNV Trigger: AACATTGGAATTTGCTGGAGAACTTGAGACACATCAAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR GCA 72 bp | ACAGACATTCTCTGGTTAATTAGTAAGGGCTCTGCATaGAGCTTCAGCCAGTCCATTACTCCACCAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TDILWLISKGSA*SFSQSITPPGK Trigger: CTTTCCTGGTGGAGTAATGGACTGGCTGAAGCTGCATGCAGAGCCCTTACTAATTAACCAGAGAATGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAGTGTTTGTTGAAGACAACGACTGATCTGGAGGGTGGATGTTTGTGTTGCTACTACAGCCAGTCCTaGATGTGTCTCAAGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LKCLLKTTTDLEGGCLCCYYSQS*MCLKFS Trigger: GGAGAACTTGAGACACATCAAGGACTGGCTGTAGTA...GCAACACAAACATCCACCCTCCAGATCAGTCGTTGTCTTCAACAAACACTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGAATTTGAAGTGTTTGTaGAAGACAACGACTGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGPLHCTLKSSFPSFNVTNLKCL*KTTTDL Trigger: CAGATCAGTCGTTGTCTTCAACAAACACTTCAAATT...CGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAGCTTCTCATTGCAAAGTAGTCAGGGGACCTTTTATGAAGTGAGAAGTCTTCTGGAGGGTGGATGTTaGTGTTGCTATGACAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSFSLQSSQGTFYEVRSLLEGGC*CCYDKS Trigger: GCTCTTGTCATAGCAACACAAACATCCACCCTCCAG...AAGACTTCTCACTTCATAAAAGGTCCCCTGACTACTTTGCAATGAGAAGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGTGGGGAGAAAAAGAGAAAGGCATAGCTTCTCATTGCAAAGTAGTCAGGGGTTAAGTCATCATTACTaGGTTAGCCATGGTATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GVGRKRERHSFSLQSSQGLSHHY*VSHGIG Trigger: ACCAATACCATGGCTAACCAAGTAATGATGACTTAA...CCCCTGACTACTTTGCAATGAGAAGCTATGCCTTTCTCTTTTTCTCCCCACGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTATTCTTACCAAACAGGAGCTTGCTAAAGCCCCTCCCCACCAAACAAAAAATTTGAAGTGTTTGTaGAAGACAACGACTGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: NCILTKQELAKAPPHQTKNLKCL*KTTTDL Trigger: CAGATCAGTCGTTGTCTTCAACAAACACTTCAAATT...TTTTGTTTGGTGGGGAGGGGCTTTAGCAAGCTCCTGTTTGGTAAGAATACAATT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR TCA 72 bp | CTGGAGGGTGGATGTTTGTGTTGCTATGACAAGAGCTaGTATCATCTTAAGTTAGTTTACAGGGAAGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: LEGGCLCCYDKS*YHLKLVYREVF Trigger: GAATACTTCCCTGTAAACTAACTTAAGATGATATCAGCTCTTGTCATAGCAACACAAACATCCACCCTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTATTGGTAGACGTAACCATATTGCATGCTaGTTTGACAGACATTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NGLTLSHHYLVSHGIGRRNHIAC*FDRHSL Trigger: CAGAGAATGTCTGTCAAACAAGCATGCAATATGGTT...ACGTCTACCAATACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| 3UTR CCA 72 bp | TTTATCTACTATTACACATCTGAATCTAGTATGTTCTaGACAATGGATACCGAGGGGTGTGTCTTCCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: FIYYYTSESSMF*TMDTEGCVFLI Trigger: TATGAGGAAGACACACCCCTCGGTATCCATTGTCCAGAACATACTAGATTCAGATGTGTAATAGTAGATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATCCAGAGAGTAGACGCTaGTGTGGACACGGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQASMSRYTLKKQRFAGHPESRR*CGHGSS Trigger: GGAGGAGCCGTGTCCACACCAGCGTCTACTCTCTGG...ATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGGACAACCTTGTCCCTTaGAGTGGAGGATTTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLHCTLKSSFPSFNVTDNLVP*SGGFCP Trigger: GGGGCAAAATCCTCCACTTCAAGGGACAAGGTTGTC...CGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACTGCTTCTCACCAGGATaGTGCTCTTCCTCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSPALHFKILLPKLQCHCFSPG*CSSSAF Trigger: GAAGGCTGAGGAAGAGCAGCATCCTGGTGAGAAGCA...GTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCAGGATAACCAGGGTTACACAGAGAAGCCCTGTCTCAGAGGGGAAAGGACTCTCAATCGTGAACTaGTTCTCACCAGGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRITRVTQRSPVSEGKGLSIVN*FSPGCC Trigger: GCAGCATCCTGGTGAGAAGCAGTTCACGATTGAGAG...TCCTTTCCCCTCTGAGACAGGGCTTCTCTGTGTAACCCTGGTTATCCTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | GGCGTGGGGAGAAAAAGAGAAAGGCATAGCTTCTCATTGCAAAGTAGTCAGGGGTTCTCACCAGGATGCTaGTCTTCCTCAGCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GVGRKRERHSFSLQSSQGFSPGC*SSSAFT Trigger: CGTGAAGGCTGAGGAAGAGCAGCATCCTGGTGAGAA...CCCCTGACTACTTTGCAATGAGAAGCTATGCCTTTCTCTTTTTCTCCCCACGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGACAACCTTGTCCCTTaGAGTGGAGGATTTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPKLQCHVTHSRSRGLLDNLVP*SGGFCP Trigger: GGGGCAAAATCCTCCACTTCAAGGGACAAGGTTGTC...CAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACCTTAAGGAGGGTCTCTaGCATTCCAACCAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSPALHFKILLPKLQCHLKEGL*HSNQFF Trigger: GAAGAACTGGTTGGAATGGCAGAGACCCTCCTTAAG...GTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGTTCTCACCAGGATGCTaGTCTTCCTCAGCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLPKLQCHVTHSRSRGLLFSPGC*SSSAFT Trigger: CGTGAAGGCTGAGGAAGAGCAGCATCCTGGTGAGAA...CAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGAGAGGCAAACGAATCTaGGGAGGAGTTGTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLHCTLKSSFPSFNVTRGKRI*GGVVCC Trigger: GCAACAAACAACTCCTCCCCAGATTCGTTTGCCTCT...CGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAACTATTAACCAAGCAGCCTGTACAGTGTAGTCCCTGGGTCCCCTGCACTGTTCTTCAAACTGTGTaGCTGCCTGAGGTAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: TELLTKQPVQCSPWVPCTVLQTV*LPEVTL Trigger: AAGTGTTACCTCAGGCAGTCACACAGTTTGAAGAAC...AGTGCAGGGGACCCAGGGACTACACTGTACAGGCTGCTTGGTTAATAGTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | AGACAACGACTGATCTGGAGGGTGGATGTTTGTGTTGCTATGACAAGAGCTGATGTCCTATCATCCGTCTaGTTGAGACGTCATCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQRLIWRVDVCVAMTRADVLSSV*LRRHPH Trigger: GTGCGGATGACGTCTCAATCAGACGGATGATAGGAC...ATCAGCTCTTGTCATAGCAACACAAACATCCACCCTCCAGATCAGTCGTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCATGGCTACTACAGCCAGTCCTTGATGTGTCTCAAGTTCTCCAGCAAATTTGCTTCTCACCAGGATaGTGCTCTTCCTCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPWLLQPVLDVSQVLQQICFSPG*CSSSAF Trigger: GAAGGCTGAGGAAGAGCAGCATCCTGGTGAGAAGCA...AATTTGCTGGAGAACTTGAGACACATCAAGGACTGGCTGTAGTAGCCATGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR CCA 90 bp | GTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCACACCATTAATCCTTGTCCCTTGAAGTaGAGGATTTTGCCCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTHSRSRGLLGMVMHTINPCPLK*RILPPS Trigger: TGACGGGGGCAAAATCCTCCACTTCAAGGGACAAGG...ATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| 3UTR CAA 72 bp | CTCCACCAGGAAAGCCATGGCTACTACAGCCAGTCCTaGATGTGTCTCAAGTTCTCCAGCAAATTCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LHQESHGYYSQS*MCLKFSSKFQC Trigger: ACATTGGAATTTGCTGGAGAACTTGAGACACATCAAGGACTGGCTGTAGTAGCCATGGCTTTCCTGGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| CDS-3UTR TCA 90 bp | GTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCACACCATTAATGTAACACTTGCAGCATaGCCAAAGACTGTCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTHSRSRGLLGMVMHTINVTLAA*PKTVEA Trigger: GGCTTCGACAGTCTTTGGTCATGCTGCAAGTGTTAC...ATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCACACCTACAAAGTTCCTCCTTaGACAGTTCCATTAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHVTHSRSRGLLGMVMHTYKVPP*TVPLRE Trigger: CTCCCTTAATGGAACTGTCCAAGGAGGAACTTTGTA...GGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
||
| CDS-3UTR CCA 90 bp | TTAGACTTTCAGGGGCATGTTGGGATAACTGAATACGGAAAAGGCATTTATGTTCCAGAGAGTAGACGCTaGTGTGGACACGGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDFQGHVGITEYGKGIYVPESRR*CGHGSS Trigger: GGAGGAGCCGTGTCCACACCAGCGTCTACTCTCTGG...AACATAAATGCCTTTTCCGTATTCAGTTATCCCAACATGCCCCTGAAAGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | TCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGATGCAGTTCTTCAAACTGTGTaGCTGCCTGAGGTAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SMSRYTLKKQRFAGHGDAVLQTV*LPEVTL Trigger: AAGTGTTACCTCAGGCAGTCACACAGTTTGAAGAAC...TGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGTTTAAGATACCATCCTaGGAGTTCGGAGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVFKIPS*EFGALL Trigger: GAGCAAAGCTCCGAACTCTCAGGATGGTATCTTAAA...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATTTACAACGGGCAATCTaGCATCTCTCAATCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQASMSRYTLKKQRFAGHLQRAI*HLSIVN Trigger: GTTCACGATTGAGAGATGGCAGATTGCCCGTTGTAA...ATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGAGTTTCCTCATCGCTaGAACTCTCCCCAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKILLPKLQCHVTHSRSREFPHR*NSPQAG Trigger: TCCTGCCTGGGGAGAGTTCCAGCGATGAGGAAACTC...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTGTTTGTTGAAGACAACGACTGATCTGGAGGGTGGATGTTTGTGTTGCAGACGTCATCCGCACTaGGAAACACCTGCTTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKCLLKTTTDLEGGCLCCRRHPH*ETPASL Trigger: TAACGAAGCAGGTGTTTCCCAGTGCGGATGACGTCT...GCAACACAAACATCCACCCTCCAGATCAGTCGTTGTCTTCAACAAACACTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| 3UTR CAA 72 bp | CTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTaGCTGGGCATGGTGATGCACACCATTAATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQCHVTHSRSRG*LGMVMHTINPR Trigger: TCTGGGATTAATGGTGTGCATCACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 ENSMUST00000129464.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGACCTTGTCCCTTGAAGTaGAGGATTTTGCCCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKILLPKLQCHVTHSRSRPCPLK*RILPPS Trigger: TGACGGGGGCAAAATCCTCCACTTCAAGGGACAAGG...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGTAACACTTGCAGCATaGCCAAAGACTGTCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FKILLPKLQCHVTHSRSRVTLAA*PKTVEA Trigger: GGCTTCGACAGTCTTTGGTCATGCTGCAAGTGTTAC...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACGCTTCGTTACTCCTATaGTTTCTTGAACTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLHCTLKSSFPSFNVTLHASLLL*FLELHS Trigger: AGAATGAAGTTCAAGAAATCATAGGAGTAACGAAGC...GTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATAACTCAAACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTGTCCTATCATCCGTCTaGTTGAGACGTCATCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QNNSNGLTLSHHYLVSHGVLSSV*LRRHPH Trigger: GTGCGGATGACGTCTCAATCAGACGGATGATAGGAC...ACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTTTGAGTTATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACTTTCAGGGGCATGTTGGGATAACTGAATACGGAAAAGGCATTTATGTTCTCTCAATCGTGAACTaGTTCTCACCAGGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDFQGHVGITEYGKGIYVLSIVN*FSPGCC Trigger: GCAGCATCCTGGTGAGAAGCAGTTCACGATTGAGAG...AACATAAATGCCTTTTCCGTATTCAGTTATCCCAACATGCCCCTGAAAGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCAATTGTATTCTTACCAAACAGGAGCTTGCTAAAGCCCCTCCCCACCAATTACAACGGGCAATCTaGCATCTCTCAATCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YFNCILTKQELAKAPPHQLQRAI*HLSIVN Trigger: GTTCACGATTGAGAGATGGCAGATTGCCCGTTGTAA...TTGGTGGGGAGGGGCTTTAGCAAGCTCCTGTTTGGTAAGAATACAATTGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACAGTGGAAATAAACAGGTCAAAATTAAGCAGTTTAGCATCATGGCTGACAGACGTCATCCGCACTaGGAAACACCTGCTTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CYSGNKQVKIKQFSIMADRRHPH*ETPASL Trigger: TAACGAAGCAGGTGTTTCCCAGTGCGGATGACGTCT...GTCAGCCATGATGCTAAACTGCTTAATTTTGACCTGTTTATTTCCACTGTAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
||
| CDS-3UTR GCA 90 bp | AACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTATTGGTAGACGTCTTAAGGAGGGTCTCTaGCATTCCAACCAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGLTLSHHYLVSHGIGRRLKEGL*HSNQFF Trigger: GAAGAACTGGTTGGAATGGCAGAGACCCTCCTTAAG...ACGTCTACCAATACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR TCA 90 bp | CAGAATAACTCAAACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTCAGGAAAGCATTTCCTaGATATGGGTCTCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QNNSNGLTLSHHYLVSHGQESIS*IWVSLC Trigger: GCACAGAGAGACCCATATTCAGGAAATGCTTTCCTG...ACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTTTGAGTTATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS-3UTR TCA 90 bp | CAGAATAACTCAAACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTTTTAAGATACCATCCTaGGAGTTCGGAGCTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QNNSNGLTLSHHYLVSHGFKIPS*EFGALL Trigger: GAGCAAAGCTCCGAACTCTCAGGATGGTATCTTAAA...ACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTTTGAGTTATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR GCA 90 bp | AACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTATTGGTAGACGTATATGGGTCTCTCTGTaGTTTCTCCAGAGCACTATT | + |
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Preference number: 4 (lower is better) Translates to: NGLTLSHHYLVSHGIGRRIWVSL*FLQSTI Trigger: AATAGTGCTCTGGAGAAAGCACAGAGAGACCCATAT...ACGTCTACCAATACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS TCA 90 bp | TCGGCTTCTTCGTGCAGTTGTTCAGCTTCTGTCCTATCATCCGTCTaGTTGAGACGTCATCCGCACTGGGAAACACCTGCTTCGTTACTC | + |
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Preference number: 5 (lower is better) Translates to: SASSCSCSASVLSSV*LRRHPHWETPASLL Trigger: GAGTAACGAAGCAGGTGTTTCCCAGTGCGGATGACGTCTCAATCAGACGGATGATAGGACAGAAGCTGAACAACTGCACGAAGAAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS TCA 90 bp | AGTTTCCTCATCGCTGGAACTCTCCCCAGGCAGGAAAGCATTTCCTaGATATGGGTCTCTCTGTGCTTTCTCCAGAGCACTATTCGCATT | + |
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Preference number: 5 (lower is better) Translates to: SFLIAGTLPRQESIS*IWVSLCFLQSTIRI Trigger: AATGCGAATAGTGCTCTGGAGAAAGCACAGAGAGACCCATATTCAGGAAATGCTTTCCTGCCTGGGGAGAGTTCCAGCGATGAGGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS TCA 90 bp | CTTCTTCGTGCAGTTGTTCAGCTTCTGTCCTATCATCCGTCTGATTaGGACGTCATCCGCACTGGGAAACACCTGCTTCGTTACTCCTAT | + |
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Preference number: 5 (lower is better) Translates to: LLRAVVQLLSYHPSD*DVIRTGKHLLRYSY Trigger: ATAGGAGTAACGAAGCAGGTGTTTCCCAGTGCGGATGACGTCTCAATCAGACGGATGATAGGACAGAAGCTGAACAACTGCACGAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGGAATCTGGGGAGGAGTaGTTTGTTGCTCTCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVESGEE*FVALQR Trigger: TCTCTGGAGAGCAACAAACAACTCCTCCCCAGATTC...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCAGCCTGTACAGTGTAGTCCCTGGGTCCCCTGCACTGCACTTTAAAATCTCTTTTTCTAAGAACTaGGTTGTCGGTGATGTCATC | + |
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Preference number: 5 (lower is better) Translates to: PSSLYSVVPGSPALHFKISFSKN*VVGDVI Trigger: GATGACATCACCGACAACCAAGTTCTTAGAAAAAGA...GATTTTAAAGTGCAGTGCAGGGGACCCAGGGACTACACTGTACAGGCTGCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000129464.8 |
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| CDS-3UTR CAA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGTCGCATTTTCTGAGTTaGCTGTCTCTGTCCGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVSHFLS*LSLSVS Trigger: GGAAACGGACAGAGACAGCAAACTCAGAAAATGCGA...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000129464.8 |
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| CDS-3UTR CAA 90 bp | CCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACGAGCTGGAAGTAGAGTaGGAATTACTGCACAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PLHCTLKSSFPSFNVTLHELEVE*ELLHRE Trigger: CTCTCTGTGCAGTAATTCCAACTCTACTTCCAGCTC...GTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS TCA 90 bp | TTGAACTTCATTCTGATTCATAGCTGGTTTGACAACCTTGTCCCTTaGAGTGGAGGATTTTGCCCCCGTCAGACTGTGTGTGGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: LNFILIHSWFDNLVP*SGGFCPRQTVCGHV Trigger: TACATGGCCACACACAGTCTGACGGGGGCAAAATCCTCCACTTCAAGGGACAAGGTTGTCAAACCAGCTATGAATCAGAATGAAGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGTGTTTGTTGAAGACAACGACTGATCTGGAGGGTGGATGTTTGTGTTGCGGCTTCTTCGTGCAGTaGTTCAGCTTCTGTCCTATC | + |
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Preference number: 5 (lower is better) Translates to: LKCLLKTTTDLEGGCLCCGFFVQ*FSFCPI Trigger: GATAGGACAGAAGCTGAACAACTGCACGAAGAAGCC...GCAACACAAACATCCACCCTCCAGATCAGTCGTTGTCTTCAACAAACACTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | AAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGTTTGCTGGGCATGGTGTTTCTAAGAACTTGGTaGTCGGTGATGTCATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: KLQCHVTHSRSRGLLGMVFLRTW*SVMSSV Trigger: GACAGATGACATCACCGACAACCAAGTTCTTAGAAA...CACCATGCCCAGCAAACCTCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000129464.8 |
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| CDS-3UTR CAA 90 bp | GTCCTTGATGTGTCTCAAGTTCTCCAGCAAATTCCAATGTTTGACGGAAAACCAGAATCTGGGGAGGAGTaGTTTGTTGCTCTCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VLDVSQVLQQIPMFDGKPESGEE*FVALQR Trigger: TCTCTGGAGAGCAACAAACAACTCCTCCCCAGATTC...TGGTTTTCCGTCAAACATTGGAATTTGCTGGAGAACTTGAGACACATCAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | GGTCCCCTGCACTGCACTTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTATTCAGGCTTTCGATTTaGTTACAAAGTTCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GPLHCTLKSSFPSFNVTLFRLSI*LQSSSL Trigger: CAAGGAGGAACTTTGTAACAAAATCGAAAGCCTGAA...TAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGCTGGTTTGACAACCTaGTCCCTTGAAGTGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: FKILLPKLQCHVTHSRSRAGLTT*SLEVED Trigger: ATCCTCCACTTCAAGGGACAAGGTTGTCAAACCAGC...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGAGGCTTCTTCGTGCAGTaGTTCAGCTTCTGTCCTATC | + |
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Preference number: 5 (lower is better) Translates to: FKILLPKLQCHVTHSRSRGFFVQ*FSFCPI Trigger: GATAGGACAGAAGCTGAACAACTGCACGAAGAAGCC...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | TTAGACTTTCAGGGGCATGTTGGGATAACTGAATACGGAAAAGGCATTTATGTTGCTGGTTTGACAACCTaGTCCCTTGAAGTGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LDFQGHVGITEYGKGIYVAGLTT*SLEVED Trigger: ATCCTCCACTTCAAGGGACAAGGTTGTCAAACCAGC...AACATAAATGCCTTTTCCGTATTCAGTTATCCCAACATGCCCCTGAAAGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGTGTTTGTTGAAGACAACGACTGATCTGGAGGGTGGATGTTTGTGTTGCTCTTTTTCTAAGAACTaGGTTGTCGGTGATGTCATC | + |
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Preference number: 5 (lower is better) Translates to: LKCLLKTTTDLEGGCLCCSFSKN*VVGDVI Trigger: GATGACATCACCGACAACCAAGTTCTTAGAAAAAGA...GCAACACAAACATCCACCCTCCAGATCAGTCGTTGTCTTCAACAAACACTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000129464.8 |
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| CDS-3UTR CAA 90 bp | TGCTACAGTGGAAATAAACAGGTCAAAATTAAGCAGTTTAGCATCATGGCTGACGAGCTGGAAGTAGAGTaGGAATTACTGCACAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: CYSGNKQVKIKQFSIMADELEVE*ELLHRE Trigger: CTCTCTGTGCAGTAATTCCAACTCTACTTCCAGCTC...GTCAGCCATGATGCTAAACTGCTTAATTTTGACCTGTTTATTTCCACTGTAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAATCCTCCTTCCCAAGCTTCAATGTCACGTTACACACTCAAGAAGCAGATTTCTAAGAACTTGGTaGTCGGTGATGTCATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: FKILLPKLQCHVTHSRSRFLRTW*SVMSSV Trigger: GACAGATGACATCACCGACAACCAAGTTCTTAGAAA...TCTGCTTCTTGAGTGTGTAACGTGACATTGAAGCTTGGGAAGGAGGATTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000129464.8 |
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| CDS-3UTR CAA 90 bp | AACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTATTGGTAGACGTTTACAAAGTTCCTCCTaGGACAGTTCCATTAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: NGLTLSHHYLVSHGIGRRLQSSS*DSSIKG Trigger: TCCCTTAATGGAACTGTCCAAGGAGGAACTTTGTAA...ACGTCTACCAATACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS-3UTR CAA 90 bp | CAGAATAACTCAAACGGTTTAACGTTAAGTCATCATTACTTGGTTAGCCATGGTTTCAGGCTTTCGATTTaGTTACAAAGTTCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: QNNSNGLTLSHHYLVSHGFRLSI*LQSSSL Trigger: CAAGGAGGAACTTTGTAACAAAATCGAAAGCCTGAA...ACCATGGCTAACCAAGTAATGATGACTTAACGTTAAACCGTTTGAGTTATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS GCA 72 bp | CATCTCTCAATCGTGAACTGCTTCTCACCAGGATGCTaGTCTTCCTCAGCCTTCACGGAACTTGGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HLSIVNCFSPGC*SSSAFTELGEL Trigger: CAGCTCCCCAAGTTCCGTGAAGGCTGAGGAAGAGCAGCATCCTGGTGAGAAGCAGTTCACGATTGAGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS GCA 72 bp | TGTGGACACGGCTCCTCCACTCTTAAGGAGGGTCTCTaGCATTCCAACCAGTTCTTCAAACTGTGTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: CGHGSSTLKEGL*HSNQFFKLCDC Trigger: GCAGTCACACAGTTTGAAGAACTGGTTGGAATGGCAGAGACCCTCCTTAAGAGTGGAGGAGCCGTGTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS CAA 90 bp | GAGTTGGAATTACTGCACAGAGAGGCAAACGAATCTGGGGAGGAGTaGTTTGTTGCTCTCCAGAGAGTAGACGCTGGTGTGGACACGGCT | + |
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Preference number: 6 (lower is better) Translates to: ELELLHREANESGEE*FVALQRVDAGVDTA Trigger: AGCCGTGTCCACACCAGCGTCTACTCTCTGGAGAGCAACAAACAACTCCTCCCCAGATTCGTTTGCCTCTCTGTGCAGTAATTCCAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS TCA 72 bp | ATCGCTGGAACTCTCCCCAGGCAGGAAAGCATTTCCTaGATATGGGTCTCTCTGTGCTTTCTCCAGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: IAGTLPRQESIS*IWVSLCFLQST Trigger: AGTGCTCTGGAGAAAGCACAGAGAGACCCATATTCAGGAAATGCTTTCCTGCCTGGGGAGAGTTCCAGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS TCA 72 bp | GCAGTTGTTCAGCTTCTGTCCTATCATCCGTCTGATTaGGACGTCATCCGCACTGGGAAACACCTGCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: AVVQLLSYHPSD*DVIRTGKHLLR Trigger: ACGAAGCAGGTGTTTCCCAGTGCGGATGACGTCTCAATCAGACGGATGATAGGACAGAAGCTGAACAACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS CCA 72 bp | CCTTGGACAGTTCCATTAAGGGAGTTTCCTCATCGCTaGAACTCTCCCCAGGCAGGAAAGCATTTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: PWTVPLREFPHR*NSPQAGKHFLN Trigger: ATTCAGGAAATGCTTTCCTGCCTGGGGAGAGTTCCAGCGATGAGGAAACTCCCTTAATGGAACTGTCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS TCA 72 bp | ATTCTGATTCATAGCTGGTTTGACAACCTTGTCCCTTaGAGTGGAGGATTTTGCCCCCGTCAGACTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ILIHSWFDNLVP*SGGFCPRQTVC Trigger: ACACACAGTCTGACGGGGGCAAAATCCTCCACTTCAAGGGACAAGGTTGTCAAACCAGCTATGAATCAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS CCA 72 bp | AGAGTTGGAATTACTGCACAGAGAGGCAAACGAATCTaGGGAGGAGTTGTTTGTTGCTCTCCAGAGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RVGITAQRGKRI*GGVVCCSPESR Trigger: TCTACTCTCTGGAGAGCAACAAACAACTCCTCCCCAGATTCGTTTGCCTCTCTGTGCAGTAATTCCAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS CCA 72 bp | TTGAAGTGGAGGATTTTGCCCCCGTCAGACTGTGTGTaGCCATGTACTCATTCGTGTAAAGTACTTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: LKWRILPPSDCV*PCTHSCKVLAL Trigger: TAATGCAAGTACTTTACACGAATGAGTACATGGCCACACACAGTCTGACGGGGGCAAAATCCTCCACTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062289.11 ENSMUST00000115161.8 |
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| CDS CCA 72 bp | CTTTCAGGCTTTCGATTTTGTTACAAAGTTCCTCCTTaGACAGTTCCATTAAGGGAGTTTCCTCATCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSGFRFCYKVPP*TVPLREFPHRW Trigger: CCAGCGATGAGGAAACTCCCTTAATGGAACTGTCCAAGGAGGAACTTTGTAACAAAATCGAAAGCCTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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| CDS CAA 72 bp | TCTTTCAGGCTTTCGATTTTGTTACAAAGTTCCTCCTaGGACAGTTCCATTAAGGGAGTTTCCTCATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFRLSILLQSSS*DSSIKGVSSSL Trigger: CAGCGATGAGGAAACTCCCTTAATGGAACTGTCCAAGGAGGAACTTTGTAACAAAATCGAAAGCCTGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062289.11 |
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