Pregenerated sensors for BEND5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028545Ensembl transcript IDs: ENSMUST00000030274.7, ENSMUST00000139876.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTaGGAAAAGTGCTTTTCCCGTTCCATAACAACACTGGCAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: VRIVVPTGYSDALQP*EKCFSRSITTLAMA Trigger: TGCCATTGCCAGTGTTGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCCTGACCTCAGTGCCCTaGAGGCCCCCTGCCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: ITVRIVVPTGYSDALQPCLTSVP*RPPAQT Trigger: TGTCTGGGCAGGGGGCCTTCAGGGCACTGAGGTCAG...GCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR-3UTR TCA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCAGATGGCACCATCACCTaGAATGCATACACCACACAC | + |
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Preference number: 2 (lower is better) Translates to: RQATLMLYSPAKSAFPVPDGTIT*NAYTTH Trigger: GTGTGTGGTGTATGCATTTCAGGTGATGGTGCCATC...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTGATGGCACCATCACCTaGAATGCATACACCACACAC | + |
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Preference number: 2 (lower is better) Translates to: IVVPTGYSDALQPCEKCFDGTIT*NAYTTH Trigger: GTGTGTGGTGTATGCATTTCAGGTGATGGTGCCATC...AAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATCTGACCTCAGTGCCCTaGAGGCCCCCTGCCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: KIEEQREISSDGKNNSSYLTSVP*RPPAQT Trigger: TGTCTGGGCAGGGGGCCTTCAGGGCACTGAGGTCAG...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCATAACAAGACACAGCCATGTCTaGTGTAGTCTATTTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: GYSDALQPCEKCFSRSITRHSHV*CSLFGW Trigger: CCATCCAAATAGACTACACCAGACATGGCTGTGTCT...TGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGAGACACAGCCATGTCTaGTGTAGTCTATTTGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: VKITVRIVVPTGYSDALQRHSHV*CSLFGW Trigger: CCATCCAAATAGACTACACCAGACATGGCTGTGTCT...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR TCA 72 bp | GTCCAAATTCAGAATAAGACACTGACCTCAGTGCCCTaGAGGCCCCCTGCCCAGACACAGCCATGTCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: VQIQNKTLTSVP*RPPAQTQPCLV Trigger: CACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGCACTGAGGTCAGTGTCTTATTCTGAATTTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR GCA 72 bp | GTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTaGGAAAAGTGCTTTTCCCGTTCCATAACAACACTG | + |
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Preference number: 3 (lower is better) Translates to: VVPTGYSDALQP*EKCFSRSITTL Trigger: CAGTGTTGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR GCA 72 bp | ACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTaGTTTTCCCGTTCCATAACAACACTGGCAATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGYSDALQPCEK*FSRSITTLAMA Trigger: TGCCATTGCCAGTGTTGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR CCA 72 bp | CCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATaGCACCATCACCTGAAATGCATACACCACACACAA | + |
|
Preference number: 3 (lower is better) Translates to: PRHSHVWCSLFG*HHHLKCIHHTQ Trigger: TTGTGTGTGGTGTATGCATTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTGTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| 3UTR GCA 72 bp | GTACTGAGCCTCATGCTGAGTCTCAGTGAATCCATCTaGCTTCTTCGAAGTAGGAAGTCCAAATTCAGAATA | + |
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Preference number: 3 (lower is better) Translates to: VLSLMLSLSESI*LLRSRKSKFRI Trigger: TATTCTGAATTTGGACTTCCTACTTCGAAGAAGGCAGATGGATTCACTGAGACTCAGCATGAGGCTCAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATGTCCGCTCCAGCTCCTaGTGGAGGTGGCGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDVRSSS*WRWRIS Trigger: GGAGATGCGCCACCTCCAGCAGGAGCTGGAGCGGAC...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR TCA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATGTCCTCTGTGCCCGGTaGGGCCTCCACAAAGACCTC | + |
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Preference number: 4 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDVLCAR*GLHKDL Trigger: GAGGTCTTTGTGGAGGCCTCACCGGGCACAGAGGAC...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATAGGATCTGGGCCTTGTaGAGCAACAGCGCGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDRIWAL*SNSAPQ Trigger: CTGGGGCGCGCTGTTGCTCCACAAGGCCCAGATCCT...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR GCA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGGTCCGCTCCAGCTCCTaGTGGAGGTGGCGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRIVVPTGYSDALQPCEKVRSSS*WRWRIS Trigger: GGAGATGCGCCACCTCCAGCAGGAGCTGGAGCGGAC...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATAGCTCCTGCTGGAGGTaGCGCATCTCCTCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDSSCWR*RISSCC Trigger: GCAACAAGAGGAGATGCGCCACCTCCAGCAGGAGCT...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAACGCTCCAGCTCCTGCTaGAGGTGGCGCATCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFVLWSRQATLMLYSPAKRSSSC*RWRISS Trigger: AGAGGAGATGCGCCACCTCCAGCAGGAGCTGGAGCG...TTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR TCA 90 bp | CTGAGCCTCATGCTGAGTCTCAGTGAATCCATCTGCCTTCTTCGAAGTAGGAAGGTCCTCTGTGCCCGGTaGGGCCTCCACAAAGACCTC | + |
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Preference number: 4 (lower is better) Translates to: LSLMLSLSESICLLRSRKVLCAR*GLHKDL Trigger: GAGGTCTTTGTGGAGGCCTCACCGGGCACAGAGGAC...CTTCCTACTTCGAAGAAGGCAGATGGATTCACTGAGACTCAGCATGAGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCACCTCTTCTGGACAAGTaGTGTGGCCCAGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQATLMLYSPAKSAFPVPPLLDK*CGPGSG Trigger: GCCTGAGCCTGGGCCACAGCACTTGTCCAGAAGAGG...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATCACAAAGACCTCTTCTaGACAAGTGCTGTGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDHKDLF*TSAVAQ Trigger: CTGGGCCACAGCACTTGTCCAGAAGAGGTCTTTGTG...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | CCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAACGCTCCAGCTCCTGCTaGAGGTGGCGCATCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRHSHVWCSLFGWHHHLKRSSSC*RWRISS Trigger: AGAGGAGATGCGCCACCTCCAGCAGGAGCTGGAGCG...TTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAGGATATACTTGTCCATaGCAGGCGCAGGAGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QFVLWSRQATLMLYSPAKGYTCP*QAQERG Trigger: ACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCC...TTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR GCA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGTCCATGTCCTCTGTaGCCGGTGAGGCCTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: VRIVVPTGYSDALQPCEKCPCPL*PVRPPQ Trigger: TTGTGGAGGCCTCACCGGGCACAGAGGACATGGACA...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCATGTCCATGTCCTCTGTaGCCGGTGAGGCCTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: RQATLMLYSPAKSAFPVPCPCPL*PVRPPQ Trigger: TTGTGGAGGCCTCACCGGGCACAGAGGACATGGACA...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | CACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAATGCATAGCCTGCTGTACGAGCTaGCTCCGAGTCCGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSHVWCSLFGWHHHLKCIACCTS*LRVRSS Trigger: GCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGC...TATGCATTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATACCGCGTACACCTTCTaGTTGTCAAAATCCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDTAYTF*LSKSSR Trigger: GCGACTGGATTTTGACAACCAGAAGGTGTACGCGGT...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CCA 90 bp | GGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCATAACAGCCAGCGCCAGGATCTaGGCCTTGTGGAGCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: GYSDALQPCEKCFSRSITASARI*ALWSNS Trigger: GCTGTTGCTCCACAAGGCCCAGATCCTGGCGCTGGC...TGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CCA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCAAGCTCCTGCTGGAGGTaGCGCATCTCCTCTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RQATLMLYSPAKSAFPVPSSCWR*RISSCC Trigger: GCAACAAGAGGAGATGCGCCACCTCCAGCAGGAGCT...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGGTCAGATTTGTCTTCTaGCAGCGCCAGGATCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VRIVVPTGYSDALQPCEKVRFVF*QRQDLG Trigger: GCCCAGATCCTGGCGCTGGCAGAAGACAAATCTGAC...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR TCA 90 bp | CTGAGCCTCATGCTGAGTCTCAGTGAATCCATCTGCCTTCTTCGAAGTAGGAAGCTTGGAGTCTCCTGTTaGGGTCTCGGAGCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSLMLSLSESICLLRSRKLGVSC*GLGAPS Trigger: TGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAG...CTTCCTACTTCGAAGAAGGCAGATGGATTCACTGAGACTCAGCATGAGGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | ATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCTTGAGCTTCTTGGCCTaGTGTACGAGCTGCCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: ITVRIVVPTGYSDALQPCLSFLA*CTSCLR Trigger: TCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAA...GCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR TCA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGCTGTTCCCCAGATCATaGCTGCCAAGTTCTTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: VRIVVPTGYSDALQPCEKLFPRS*LPSSSC Trigger: ACACGAAGAACTTGGCAGTCATGATCTGGGGAACAG...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CCA 90 bp | CCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAACACAAAGACCTCTTCTaGACAAGTGCTGTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRHSHVWCSLFGWHHHLKHKDLF*TSAVAQ Trigger: CTGGGCCACAGCACTTGTCCAGAAGAGGTCTTTGTG...TTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTGTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR TCA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATGTCGCGAGCGGGGACTaGAGTCGCGCACGCACGACA | + |
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Preference number: 4 (lower is better) Translates to: KIEEQREISSDGKNNSSYVASGD*SRARTT Trigger: TGTCGTGCGTGCGCGACTTCAGTCCCCGCTCGCGAC...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR TCA 90 bp | CAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAATATTTGCTTCCTCACTaGAAGTGCTCCGTAACTCCG | + |
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Preference number: 4 (lower is better) Translates to: QFVLWSRQATLMLYSPAKYLLPH*KCSVTP Trigger: CGGAGTTACGGAGCACTTTCAGTGAGGAAGCAAATA...TTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR GCA 90 bp | CACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAATGCATATTGAGCTTCTTGGCCTaGTGTACGAGCTGCCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: HSHVWCSLFGWHHHLKCILSFLA*CTSCLR Trigger: TCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAA...TATGCATTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCACATTTCAGACACCAATaGCCCGTACTCCTTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RQATLMLYSPAKSAFPVPHFRHQ*PVLLEL Trigger: AAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATG...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATGCCTGCTGTACGAGCTaGCTCCGAGTCCGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KIEEQREISSDGKNNSSYACCTS*LRVRSS Trigger: GCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGC...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR TCA 90 bp | ATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTCCATCATCTTCTACATaGCTGAGAGAAAGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: IVVPTGYSDALQPCEKCFPSSST*LRESLG Trigger: CCCCAAACTTTCTCTCAGTCATGTAGAAGATGATGG...AAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR TCA 90 bp | ATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGGGCTCGAGACATTCTaGCTTTACTTTTTCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: ITVRIVVPTGYSDALQPCGLETF*LYFFQV Trigger: GACTTGGAAAAAGTAAAGTCAGAATGTCTCGAGCCC...GCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR TCA 90 bp | ATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTCACAGATGTACTTGTTaGCTTTGGAGAGTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: IVVPTGYSDALQPCEKCFHRCTC*LWRVSV Trigger: CACAGAGACTCTCCAAAGTCAACAAGTACATCTGTG...AAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | ATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTGTAACTTGTAGCTGGTaGCATTTCTCCTCATCAACC | + |
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Preference number: 4 (lower is better) Translates to: IVVPTGYSDALQPCEKCFVTCSW*HFSSST Trigger: GGTTGATGAGGAGAAATGGCACCAGCTACAAGTTAC...AAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR GCA 90 bp | ATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCTCCCCAGATCATGACTaGCAAGTTCTTCGTGTACTT | + |
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Preference number: 4 (lower is better) Translates to: ITVRIVVPTGYSDALQPCSPDHD*QVLRVL Trigger: AAGTACACGAAGAACTTGGCAGTCATGATCTGGGGA...GCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CCA 90 bp | ATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCAGAGAGGGGTGGCTTTaGGATTGCATCCTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITVRIVVPTGYSDALQPCREGWL*DCILLF Trigger: AAAAAGAAGGATGCAATCCCAAAGCCACCCCTCTCT...GCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR TCA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCACATCTTCTACATGACTaGGAGAAAGTTTGGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: RQATLMLYSPAKSAFPVPHLLHD*EKVWGF Trigger: AAATCCCCAAACTTTCTCTCAGTCATGTAGAAGATG...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR GCA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATCCTCTTCTGGACAAGTaGTGTGGCCCAGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KIEEQREISSDGKNNSSYPLLDK*CGPGSG Trigger: GCCTGAGCCTGGGCCACAGCACTTGTCCAGAAGAGG...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CCA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGATCCCGCTTCCCAGATaGACCTTGCCATTGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKITVRIVVPTGYSDALQIPLPR*TLPLSR Trigger: CCTAGACAATGGCAAGGTCCATCTGGGAAGCGGGAT...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CCA 90 bp | CACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAATGCATATGGGTAACTTGTAGCTaGTGCCATTTCTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHVWCSLFGWHHHLKCIWVTCS*CHFSSS Trigger: TGATGAGGAGAAATGGCACCAGCTACAAGTTACCCA...TATGCATTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR TCA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATCTTGGAGTCTCCTGTTaGGGTCTCGGAGCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIEEQREISSDGKNNSSYLGVSC*GLGAPS Trigger: TGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAG...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCATTTCAGACACCAATaGCCCGTACTCCTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKITVRIVVPTGYSDALQHFRHQ*PVLLEL Trigger: AAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATG...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR GCA 90 bp | CACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAATGCATATTCCCAGATGGACCTTaGCATTGTCTAGGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: HSHVWCSLFGWHHHLKCIFPDGP*HCLGYT Trigger: AGTATATCCTAGACAATGGCAAGGTCCATCTGGGAA...TATGCATTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CCA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGTACTTAGAATCTCCTTaGGTAACTTGTAGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKITVRIVVPTGYSDALQYLESP*VTCSWC Trigger: GCACCAGCTACAAGTTACCCAAGGAGATTCTAAGTA...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR GCA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATATAGGACGACGTATTTaGTTCCTCACTGAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIEEQREISSDGKNNSSYIGRRI*FLTESA Trigger: AGCACTTTCAGTGAGGAAGCAAATACGTCGTCCTAT...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS GCA 90 bp | CCTCTGTGCCCGGTGAGGCCTCCACAAAGACCTCTTCTGGACAAGTaGTGTGGCCCAGGCTCAGGCCGTTCTGTCTCTCTAGCCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLCPVRPPQRPLLDK*CGPGSGRSVSLAGP Trigger: TGGCCCGGCTAGAGAGACAGAACGGCCTGAGCCTGGGCCACAGCACTTGTCCAGAAGAGGTCTTTGTGGAGGCCTCACCGGGCACAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS GCA 90 bp | ACCAATGCCCCGTACTCCTTGAGCTTCTTGGCCTGCTGTACGAGCTaGCTCCGAGTCCGCTCCAGCTCCTGCTGGAGGTGGCGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNAPYSLSFLACCTS*LRVRSSSCWRWRIS Trigger: GGAGATGCGCCACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS TCA 90 bp | CCGCGTACACCTTCTGGTTGTCAAAATCCAGTCGCGAGCGGGGACTaGAGTCGCGCACGCACGACACGGGCAGCGCGTAGCAGACGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRTPSGCQNPVASGD*SRARTTRAARSRRC Trigger: ACAACGTCTGCTACGCGCTGCCCGTGTCGTGCGTGCGCGACTTCAGTCCCCGCTCGCGACTGGATTTTGACAACCAGAAGGTGTACGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 90 bp | CCGTTCTGTCTCTCTAGCCGGGCCACCACTGCCTCGATACTCTTGTaGGCCGCTTCACTAGGCTTCCGCCCCTCCGGTCTCTTGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PFCLSSRATTASILL*AASLGFRPSGLLMC Trigger: ACACATCAAGAGACCGGAGGGGCGGAAGCCTAGTGAAGCGGCTCACAAGAGTATCGAGGCAGTGGTGGCCCGGCTAGAGAGACAGAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 90 bp | GGTCTCGGAGCTCCTTCATTTCAGACACCAATGCCCCGTACTCCTTaGGCTTCTTGGCCTGCTGTACGAGCTGCCTCCGAGTCCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGAPSFQTPMPRTP*ASWPAVRAASESAP Trigger: TGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS GCA 90 bp | TTCATTTCAGACACCAATGCCCCGTACTCCTTGAGCTTCTTGGCCTaGTGTACGAGCTGCCTCCGAGTCCGCTCCAGCTCCTGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FISDTNAPYSLSFLA*CTSCLRVRSSSCWR Trigger: CCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS TCA 90 bp | GACCGCTGCCAAGCCGCAGGAGTAGCACATCTTGGAGTCTCCTGTTaGGGTCTCGGAGCTCCTTCATTTCAGACACCAATGCCCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: DRCQAAGVAHLGVSC*GLGAPSFQTPMPRT Trigger: AGTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 90 bp | CAGGCGCAGGAGCGGGGTAATAGGACGACGTATTTGCTTCCTCACTaGAAGTGCTCCGTAACTCCGGCTCGGGCTCGAGACATTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: QAQERGNRTTYLLPH*KCSVTPARARDILT Trigger: AGTCAGAATGTCTCGAGCCCGAGCCGGAGTTACGGAGCACTTTCAGTGAGGAAGCAAATACGTCGTCCTATTACCCCGCTCCTGCGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CCA 90 bp | AAGTCAATGGCGGGACCGCTGCCAAGCCGCAGGAGTAGCACATCTTaGAGTCTCCTGTTGAGGTCTCGGAGCTCCTTCATTTCAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: KSMAGPLPSRRSSTS*SLLLRSRSSFISDT Trigger: GGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGGTCCCGCCATTGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 90 bp | ACTCGCTGCCAAGCCGCAGGAGTAGCACATCTTGGAGTCTCCTGTTaGGGTCTCGGAGCTCCTTCATTTCAGACACCAATGCCCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: TRCQAAGVAHLGVSC*GLGAPSFQTPMPRT Trigger: AGTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139876.2 |
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| CDS GCA 90 bp | GAGTCTCCTGTTGAGGTCTCGGAGCTCCTTCATTTCAGACACCAATaGCCCGTACTCCTTGAGCTTCTTGGCCTGCTGTACGAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESPVEVSELLHFRHQ*PVLLELLGLLYELP Trigger: AGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCAGCGCATCTCCTCTTGTaGCTGCTGGTAGTTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQATLMLYSPAKSAFPVPAHLLL*LLVVSQ Trigger: CTGCGAAACTACCAGCAGCAACAAGAGGAGATGCGC...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGGTGGCGCATCTCCTCTaGTTGCTGCTGGTAGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRIVVPTGYSDALQPCEKVAHLL*LLLVVS Trigger: CGAAACTACCAGCAGCAACAAGAGGAGATGCGCCAC...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | CGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCATCTTGGAGTCTCCTGTaGAGGTCTCGGAGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQATLMLYSPAKSAFPVPSWSLL*RSRSSF Trigger: GAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGA...TGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | GCCCTGAAGGCCCCCTGCCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATTTGTCTAGGATATACTaGTCCATGACAGGCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALKAPCPDTAMSGVVYLDLSRIY*SMTGAG Trigger: TCCTGCGCCTGTCATGGACAAGTATATCCTAGACAA...ATCCAAATAGACTACACCAGACATGGCTGTGTCTGGGCAGGGGGCCTTCAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 90 bp | CGCTTCCCAGATGGACCTTGCCATTGTCTAGGATATACTTGTCCATaGCAGGCGCAGGAGCGGGGTAATAGGACGACGTATTTGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFPDGPCHCLGYTCP*QAQERGNRTTYLLP Trigger: AGGAAGCAAATACGTCGTCCTATTACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCCTAGACAATGGCAAGGTCCATCTGGGAAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CCA 90 bp | CTGTCATATAAACACTCGCTGCCAAGCCGCAGGAGTAGCACATCTTaGAGTCTCCTGTTGAGGTCTCGGAGCTCCTTCATTTCAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LSYKHSLPSRRSSTS*SLLLRSRSSFISDT Trigger: GGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGAGTGTTTATATGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGGCGTACACCTTCTGGTaGTCAAAATCCAGTCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRIVVPTGYSDALQPCEKAYTFW*SKSSRE Trigger: CTCGCGACTGGATTTTGACAACCAGAAGGTGTACGC...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CAA 90 bp | CCCAGACACAGCCATGTCTGGTGTAGTCTATTTGGATGGCACCATCACCTGAAAAATGCCCCGTACTCCTaGAGCTTCTTGGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRHSHVWCSLFGWHHHLKNAPYS*SFLACC Trigger: ACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATT...TTTCAGGTGATGGTGCCATCCAAATAGACTACACCAGACATGGCTGTGTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | GGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCATAACAGCGCATCTCCTCTTGTaGCTGCTGGTAGTTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GYSDALQPCEKCFSRSITAHLLL*LLVVSQ Trigger: CTGCGAAACTACCAGCAGCAACAAGAGGAGATGCGC...TGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | GGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCCCGTTCCATAACATTCTCAAGGTCAGATTaGTCTTCTGCCAGCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GYSDALQPCEKCFSRSITFSRSD*SSASAR Trigger: CCTGGCGCTGGCAGAAGACAAATCTGACCTTGAGAA...TGTTATGGAACGGGAAAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS GCA 90 bp | AAGTTCTTCGTGTACTTAGAATCTCCTTGGGTAACTTGTAGCTGGTaGCATTTCTCCTCATCAACCCAAATCCCGCTTCCCAGATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KFFVYLESPWVTCSW*HFSSSTQIPLPRWT Trigger: GGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTTACCCAAGGAGATTCTAAGTACACGAAGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CAA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGTCTTGGAGTCTCCTGTaGAGGTCTCGGAGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKITVRIVVPTGYSDALQSWSLL*RSRSSF Trigger: GAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGA...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | ATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTAGATGGACCTTGCCATaGTCTAGGATATACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVVPTGYSDALQPCEKCFRWTLP*SRIYLS Trigger: GGACAAGTATATCCTAGACAATGGCAAGGTCCATCT...AAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CAA 90 bp | GTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTTCTCACAGATGTACTaGTTGACTTTGGAGAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRIVVPTGYSDALQPCEKFSQMY*LTLESL Trigger: GAGACTCTCCAAAGTCAACAAGTACATCTGTGAGAA...CTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CCA 90 bp | CCCCAGATCATGACTGCCAAGTTCTTCGTGTACTTAGAATCTCCTTaGGTAACTTGTAGCTGGTGCCATTTCTCCTCATCAACCCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: PQIMTAKFFVYLESP*VTCSWCHFSSSTQI Trigger: GATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTTACCCAAGGAGATTCTAAGTACACGAAGAACTTGGCAGTCATGATCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CAA 90 bp | CAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAATGTACTTGTTGACTTaGGAGAGTCTCTGTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QFVLWSRQATLMLYSPAKMYLLT*ESLCAI Trigger: AATTGCACAGAGACTCTCCAAAGTCAACAAGTACAT...TTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | ATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGCCCTGCGAAAAGTGCTTTTCACAGATGTACTTGTaGACTTTGGAGAGTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IVVPTGYSDALQPCEKCFSQMYL*TLESLC Trigger: ACAGAGACTCTCCAAAGTCAACAAGTACATCTGTGA...AAAGCACTTTTCGCAGGGCTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCTCATGCTGAGTCTCAGTGAATCCATCTGCCTTCTTCGAAGTAGGAAGTTCTCACAGATGTACTaGTTGACTTTGGAGAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLMLSLSESICLLRSRKFSQMY*LTLESL Trigger: GAGACTCTCCAAAGTCAACAAGTACATCTGTGAGAA...CTTCCTACTTCGAAGAAGGCAGATGGATTCACTGAGACTCAGCATGAGGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATGTGGCGCATCTCCTCTaGTTGCTGCTGGTAGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KIEEQREISSDGKNNSSYVAHLL*LLLVVS Trigger: CGAAACTACCAGCAGCAACAAGAGGAGATGCGCCAC...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATAATGCCCCGTACTCCTaGAGCTTCTTGGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KIEEQREISSDGKNNSSYNAPYS*SFLACC Trigger: ACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATT...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATCGCCCCTCCGGTCTCTaGATGTGTCTAAGCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KIEEQREISSDGKNNSSYRPSGL*MCLSCK Trigger: TTTACAGCTTAGACACATCAAGAGACCGGAGGGGCG...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
||
| CDS-3UTR CAA 90 bp | AACAAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGGAGAGAGGGGTGGCTTaGGGATTGCATCCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NKIEEQREISSDGKNNSSERGVA*GLHPSF Trigger: AAAAGAAGGATGCAATCCCAAAGCCACCCCTCTCTC...CGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGTCACAGATGTACTTGTaGACTTTGGAGAGTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VKITVRIVVPTGYSDALQSQMYL*TLESLC Trigger: ACAGAGACTCTCCAAAGTCAACAAGTACATCTGTGA...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS-3UTR CAA 90 bp | AAAATAGAGGAGCAGAGAGAGATATCCTCCGATGGTAAAAATAACAGTTCGTATCTTCCCAGATGGACCTaGCCATTGTCTAGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: KIEEQREISSDGKNNSSYLPRWT*PLSRIY Trigger: GTATATCCTAGACAATGGCAAGGTCCATCTGGGAAG...ATACGAACTGTTATTTTTACCATCGGAGGATATCTCTCTCTGCTCCTCTATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS-3UTR CAA 90 bp | GTAAAAATAACAGTTCGTATTGTGGTCCCGACAGGCTACTCTGATGCTTTACAGATGTACTTGTTGACTTaGGAGAGTCTCTGTGCAATT | + |
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Preference number: 5 (lower is better) Translates to: VKITVRIVVPTGYSDALQMYLLT*ESLCAI Trigger: AATTGCACAGAGACTCTCCAAAGTCAACAAGTACAT...CTGTAAAGCATCAGAGTAGCCTGTCGGGACCACAATACGAACTGTTATTTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS GCA 90 bp | CATGATTTTCTCACAGATGTACTTGTTGACTTTGGAGAGTCTCTGTaGAATTTCCGTTTCATCCACCGTTTCTTGTGCTATTCTGTCATA | + |
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Preference number: 5 (lower is better) Translates to: HDFLTDVLVDFGESL*NFRFIHRFLCYSVI Trigger: TATGACAGAATAGCACAAGAAACGGTGGATGAAACGGAAATTGCACAGAGACTCTCCAAAGTCAACAAGTACATCTGTGAGAAAATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CCA 72 bp | GATTTGTCTTCTGCCAGCGCCAGGATCTGGGCCTTGTaGAGCAACAGCGCGCCCCAGTCCCGAGGGGCACGC | + |
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Preference number: 6 (lower is better) Translates to: DLSSASARIWAL*SNSAPQSRGAR Trigger: GCGTGCCCCTCGGGACTGGGGCGCGCTGTTGCTCCACAAGGCCCAGATCCTGGCGCTGGCAGAAGACAAATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 72 bp | CCTTCTGGTTGTCAAAATCCAGTCGCGAGCGGGGACTaGAGTCGCGCACGCACGACACGGGCAGCGCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PSGCQNPVASGD*SRARTTRAARS Trigger: GCTACGCGCTGCCCGTGTCGTGCGTGCGCGACTTCAGTCCCCGCTCGCGACTGGATTTTGACAACCAGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS TCA 72 bp | CTCTCTAGCCGGGCCACCACTGCCTCGATACTCTTGTaGGCCGCTTCACTAGGCTTCCGCCCCTCCGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSSRATTASILL*AASLGFRPSGL Trigger: GAGACCGGAGGGGCGGAAGCCTAGTGAAGCGGCTCACAAGAGTATCGAGGCAGTGGTGGCCCGGCTAGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS GCA 72 bp | CCGTACTCCTTGAGCTTCTTGGCCTGCTGTACGAGCTaGCTCCGAGTCCGCTCCAGCTCCTGCTGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PYSLSFLACCTS*LRVRSSSCWRW Trigger: CCACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 90 bp | CCTCCGAGTCCGCTCCAGCTCCTGCTGGAGGTGGCGCATCTCCTCTaGTTGCTGCTGGTAGTTTCGCAGCAGCTCCTCATACAGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PPSPLQLLLEVAHLL*LLLVVSQQLLIQSP Trigger: CGGGCTCTGTATGAGGAGCTGCTGCGAAACTACCAGCAGCAACAAGAGGAGATGCGCCACCTCCAGCAGGAGCTGGAGCGGACTCGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS GCA 72 bp | GACACCAATGCCCCGTACTCCTTGAGCTTCTTGGCCTaGTGTACGAGCTGCCTCCGAGTCCGCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DTNAPYSLSFLA*CTSCLRVRSSS Trigger: GGAGCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS GCA 72 bp | CCGGTGAGGCCTCCACAAAGACCTCTTCTGGACAAGTaGTGTGGCCCAGGCTCAGGCCGTTCTGTCTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PVRPPQRPLLDK*CGPGSGRSVSL Trigger: TAGAGAGACAGAACGGCCTGAGCCTGGGCCACAGCACTTGTCCAGAAGAGGTCTTTGTGGAGGCCTCACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CCA 72 bp | GCGGGACCGCTGCCAAGCCGCAGGAGTAGCACATCTTaGAGTCTCCTGTTGAGGTCTCGGAGCTCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: AGPLPSRRSSTS*SLLLRSRSSFI Trigger: AATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGGTCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CAA 72 bp | CCGCTCCAGCTCCTGCTGGAGGTGGCGCATCTCCTCTaGTTGCTGCTGGTAGTTTCGCAGCAGCTCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: PLQLLLEVAHLL*LLLVVSQQLLI Trigger: TATGAGGAGCTGCTGCGAAACTACCAGCAGCAACAAGAGGAGATGCGCCACCTCCAGCAGGAGCTGGAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 90 bp | AGCTCCTTCATTTCAGACACCAATGCCCCGTACTCCTTGAGCTTCTaGGCCTGCTGTACGAGCTGCCTCCGAGTCCGCTCCAGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSFISDTNAPYSLSF*ACCTSCLRVRSSSC Trigger: GCAGGAGCTGGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAAGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 90 bp | AGGTCTCGGAGCTCCTTCATTTCAGACACCAATGCCCCGTACTCCTaGAGCTTCTTGGCCTGCTGTACGAGCTGCCTCCGAGTCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RSRSSFISDTNAPYS*SFLACCTSCLRVRS Trigger: GGAGCGGACTCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 90 bp | GGACCGCTGCCAAGCCGCAGGAGTAGCACATCTTGGAGTCTCCTGTaGAGGTCTCGGAGCTCCTTCATTTCAGACACCAATGCCCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: GPLPSRRSSTSWSLL*RSRSSFISDTNAPY Trigger: GTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CAA 90 bp | CACTCGCTGCCAAGCCGCAGGAGTAGCACATCTTGGAGTCTCCTGTaGAGGTCTCGGAGCTCCTTCATTTCAGACACCAATGCCCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: HSLPSRRSSTSWSLL*RSRSSFISDTNAPY Trigger: GTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139876.2 |
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| CDS TCA 72 bp | AGCATCCTCCAGACTGTCCATGTCCTCTGTGCCCGGTaGGGCCTCCACAAAGACCTCTTCTGGACAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SILQTVHVLCAR*GLHKDLFWTSA Trigger: AGCACTTGTCCAGAAGAGGTCTTTGTGGAGGCCTCACCGGGCACAGAGGACATGGACAGTCTGGAGGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS TCA 72 bp | GAGCGGGGTAATAGGACGACGTATTTGCTTCCTCACTaGAAGTGCTCCGTAACTCCGGCTCGGGCTCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: ERGNRTTYLLPH*KCSVTPARARD Trigger: GTCTCGAGCCCGAGCCGGAGTTACGGAGCACTTTCAGTGAGGAAGCAAATACGTCGTCCTATTACCCCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CAA 72 bp | AGCTCCTTCATTTCAGACACCAATGCCCCGTACTCCTaGAGCTTCTTGGCCTGCTGTACGAGCTGCCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSFISDTNAPYS*SFLACCTSCLR Trigger: TCGGAGGCAGCTCGTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS GCA 72 bp | GTTGAGGTCTCGGAGCTCCTTCATTTCAGACACCAATaGCCCGTACTCCTTGAGCTTCTTGGCCTGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VEVSELLHFRHQ*PVLLELLGLLY Trigger: GTACAGCAGGCCAAGAAGCTCAAGGAGTACGGGGCATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CCA 72 bp | AAACACTCGCTGCCAAGCCGCAGGAGTAGCACATCTTaGAGTCTCCTGTTGAGGTCTCGGAGCTCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: KHSLPSRRSSTS*SLLLRSRSSFI Trigger: AATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGGCAGCGAGTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139876.2 |
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| CDS TCA 72 bp | CAAGCCGCAGGAGTAGCACATCTTGGAGTCTCCTGTTaGGGTCTCGGAGCTCCTTCATTTCAGACACCAATG | + |
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Preference number: 6 (lower is better) Translates to: QAAGVAHLGVSC*GLGAPSFQTPM Trigger: CATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 72 bp | CCAAGCCGCAGGAGTAGCACATCTTGGAGTCTCCTGTaGAGGTCTCGGAGCTCCTTCATTTCAGACACCAAT | + |
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Preference number: 6 (lower is better) Translates to: PSRRSSTSWSLL*RSRSSFISDTN Trigger: ATTGGTGTCTGAAATGAAGGAGCTCCGAGACCTCAACAGGAGACTCCAAGATGTGCTACTCCTGCGGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS TCA 72 bp | GATGGACCTTGCCATTGTCTAGGATATACTTGTCCATaGCAGGCGCAGGAGCGGGGTAATAGGACGACGTAT | + |
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Preference number: 6 (lower is better) Translates to: DGPCHCLGYTCP*QAQERGNRTTY Trigger: ATACGTCGTCCTATTACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCCTAGACAATGGCAAGGTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS GCA 72 bp | GTGTACTTAGAATCTCCTTGGGTAACTTGTAGCTGGTaGCATTTCTCCTCATCAACCCAAATCCCGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VYLESPWVTCSW*HFSSSTQIPLP Trigger: GGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTTACCCAAGGAGATTCTAAGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CCA 72 bp | ATGACTGCCAAGTTCTTCGTGTACTTAGAATCTCCTTaGGTAACTTGTAGCTGGTGCCATTTCTCCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: MTAKFFVYLESP*VTCSWCHFSSS Trigger: TGATGAGGAGAAATGGCACCAGCTACAAGTTACCCAAGGAGATTCTAAGTACACGAAGAACTTGGCAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS GCA 72 bp | TCTGTTTTTCAGAACATCTGTTCCCCAGATCATGACTaGCAAGTTCTTCGTGTACTTAGAATCTCCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVFQNICSPDHD*QVLRVLRISLG Trigger: ACCCAAGGAGATTCTAAGTACACGAAGAACTTGGCAGTCATGATCTGGGGAACAGATGTTCTGAAAAACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030274.7 |
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| CDS CAA 72 bp | ATATCCATGATTTTCTCACAGATGTACTTGTTGACTTaGGAGAGTCTCTGTGCAATTTCCGTTTCATCCACC | + |
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Preference number: 6 (lower is better) Translates to: ISMIFSQMYLLT*ESLCAISVSST Trigger: GGTGGATGAAACGGAAATTGCACAGAGACTCTCCAAAGTCAACAAGTACATCTGTGAGAAAATCATGGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 90 bp | GATTTGTTGATATCCATGATTTTCTCACAGATGTACTTGTTGACTTaGGAGAGTCTCTGTGCAATTTCCGTTTCATCCACCGTTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DLLISMIFSQMYLLT*ESLCAISVSSTVSC Trigger: ACAAGAAACGGTGGATGAAACGGAAATTGCACAGAGACTCTCCAAAGTCAACAAGTACATCTGTGAGAAAATCATGGATATCAACAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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| CDS CAA 90 bp | TTTTTACAAGATTTGTTGATATCCATGATTTTCTCACAGATGTACTaGTTGACTTTGGAGAGTCTCTGTGCAATTTCCGTTTCATCCACC | + |
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Preference number: 6 (lower is better) Translates to: FLQDLLISMIFSQMY*LTLESLCAISVSST Trigger: GGTGGATGAAACGGAAATTGCACAGAGACTCTCCAAAGTCAACAAGTACATCTGTGAGAAAATCATGGATATCAACAAATCTTGTAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030274.7 ENSMUST00000139876.2 |
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