RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BEND4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000092060

Ensembl transcript IDs: ENSMUST00000169190.5, ENSMUST00000201528.2, ENSMUST00000201705.4, ENSMUST00000201972.2, ENSMUST00000202131.4

Found 632 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAGCCTGGGCAGGGGTAGGCTGGACAGTGACTGAGTTCCCCGCCTaGCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCAC +
Preference number: 1 (lower is better)
Translates to: LAWAGVGWTVTEFPA*LQQALLPRGTGQAH
Trigger: GTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGGCAGGCGGGGAACTCAGTCACTGTCCAGCCTACCCCTGCCCAGGCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp ATGAAAGCAAGGCTTAGCCTGGGCAGGGGTAGGCTGGACAGTGACTaGGTTCCCCGCCTGCCTCCAGCAGGCCTTGCTCCCAAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: MKARLSLGRGRLDSD*VPRLPPAGLAPKRH
Trigger: GTGCCTCTTGGGAGCAAGGCCTGCTGGAGGCAGGCGGGGAACTCAGTCACTGTCCAGCCTACCCCTGCCCAGGCTAAGCCTTGCTTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp CCACCGTTGTGCAGGAAAGTCCCCACGGCCCGCCCCTGTCGGGCATaGCCTACAGCATCGCTGAACACTTTGTTTATCTGCTCCTCCGAG +
Preference number: 1 (lower is better)
Translates to: PPLCRKVPTARPCRA*PTASLNTLFICSSE
Trigger: CTCGGAGGAGCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTCATGCCCGACAGGGGCGGGCCGTGGGGACTTTCCTGCACAACGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR CCA 90 bp GGGAGGCTGAGAGAGGGTCCACATCAGCCAGGTGGCCATACTCACTaGCTGATGAGGTGTTTGGAGTCGGGAAGCTCCCCGAGAGCAGAT +
Preference number: 1 (lower is better)
Translates to: GRLREGPHQPGGHTH*LMRCLESGSSPRAD
Trigger: ATCTGCTCTCGGGGAGCTTCCCGACTCCAAACACCTCATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGACCCTCTCTCAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR CCA 90 bp AAGGTGTGCACCGGGGAGGCTGAGAGAGGGTCCACATCAGCCAGGTaGCCATACTCACTGGCTGATGAGGTGTTTGGAGTCGGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: KVCTGEAERGSTSAR*PYSLADEVFGVGKL
Trigger: GAGCTTCCCGACTCCAAACACCTCATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCACACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 90 bp TTACAGTTGCTCGTCTTCCCTTCGCCCATGTGCAGGAACACTAACTaGGCCTTCCCTGGAGACCAGCTCTGCTCAGGGGGCCAGGCTTCC +
Preference number: 1 (lower is better)
Translates to: LQLLVFPSPMCRNTN*AFPGDQLCSGGQAS
Trigger: GGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGGGAAGGCTCAGTTAGTGTTCCTGCACATGGGCGAAGGGAAGACGAGCAACTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp ACTGTTTGCTCGTTATGTACACAGGGTAGTTGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCTCGGCGGGCTGCGGCAGGAGCTGGT +
Preference number: 1 (lower is better)
Translates to: TVCSLCTQGSCSTAA*FPRWAARRAAAGAG
Trigger: ACCAGCTCCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAACTACCCTGTGTACATAACGAGCAAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 90 bp GTGTCACCAGGGGCTGCGAAACCAGCCACACAGAGATGGGAACCCTaGCCAATCGCCAAGGCTGTCACCAGGTGTCACGTAAGACGATCT +
Preference number: 1 (lower is better)
Translates to: VSPGAAKPATQRWEP*PIAKAVTRCHVRRS
Trigger: AGATCGTCTTACGTGACACCTGGTGACAGCCTTGGCGATTGGTCAGGGTTCCCATCTCTGTGTGGCTGGTTTCGCAGCCCCTGGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GAGTTTCTGGTCTCCCTCACAAGGTGTCAGTCAGGCCAAGCTTCGTaGCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTG +
Preference number: 1 (lower is better)
Translates to: EFLVSLTRCQSGQAS*QPFDSSGGLGCTCL
Trigger: CAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGACTGACACCTTGTGAGGGAGACCAGAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 90 bp CCTGGAGACCAGCTCTGCTCAGGGGGCCAGGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAATGCCTAGCTAGAAATGACTTCATG +
Preference number: 1 (lower is better)
Translates to: PGDQLCSGGQASLKI*DWRHPQCLARNDFM
Trigger: CATGAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GCCGCCCGTCCTTCTTGGAGGAGTTCACGGCCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGTAGTTGTTCAACAGCTGCTTGCTTC +
Preference number: 1 (lower is better)
Translates to: AARPSWRSSRPRPTV*SLCTQGSCSTAACF
Trigger: GAAGCAAGCAGCTGTTGAACAACTACCCTGTGTACATAACGAGCAAACAGTGGGACGAGGCCGTGAACTCCTCCAAGAAGGACGGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR GCA 90 bp GGCAGAGGCACGCGCTTCCCTCACCACCTGACCAAGAGATCAGCATaGTTTTACTCCTCCACTCTCTACCATAGGGAAGCCTTAGGAAAC +
Preference number: 1 (lower is better)
Translates to: GRGTRFPHHLTKRSA*FYSSTLYHREALGN
Trigger: GTTTCCTAAGGCTTCCCTATGGTAGAGAGTGGAGGAGTAAAAGCATGCTGATCTCTTGGTCAGGTGGTGAGGGAAGCGCGTGCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCATaGTTTCAAAGGATGTTAAGTCTTGAACTACAGGGGCAAACCCAA +
Preference number: 1 (lower is better)
Translates to: ALLPRGTGQAHLALA*FQRMLSLELQGQTQ
Trigger: TTGGGTTTGCCCCTGTAGTTCAAGACTTAACATCCTTTGAAAGCATGCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp CATGTCCTTCTGGTCAATAGAACTGGTCCTGAACTGTGGAGGGCCTaGTGCTGTGCCTGCTGTTTTATGTGCCAGGGCAGTGTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: HVLLVNRTGPELWRA*CCACCFMCQGSVLV
Trigger: CACCAGAACACTGCCCTGGCACATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAGTTCAGGACCAGTTCTATTGACCAGAAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 90 bp GCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTaGACAGCTGGATGGGGCGTTTTCATCCATGACAATGGGAAACAG +
Preference number: 1 (lower is better)
Translates to: AGKQKGNSELRPRRM*TAGWGVFIHDNGKQ
Trigger: CTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp TACTCCTCCACTCTCTACCATAGGGAAGCCTTAGGAAACACATGGTaGCAGTCCCCTAAATGCTGTGACCGACGAGGAACAGGGCTAAGG +
Preference number: 1 (lower is better)
Translates to: YSSTLYHREALGNTW*QSPKCCDRRGTGLR
Trigger: CCTTAGCCCTGTTCCTCGTCGGTCACAGCATTTAGGGGACTGTCACCATGTGTTTCCTAAGGCTTCCCTATGGTAGAGAGTGGAGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp AGGAAGAGCTTAGGGCAGCTGAGAAGGTACGAGGAGAGTGGGGGATaGATTAAAGTGCTTACCAAAGCAACCGGCACACACGAGTCAAGA +
Preference number: 1 (lower is better)
Translates to: RKSLGQLRRYEESGG*IKVLTKATGTHESR
Trigger: TCTTGACTCGTGTGTGCCGGTTGCTTTGGTAAGCACTTTAATGCATCCCCCACTCTCCTCGTACCTTCTCAGCTGCCCTAAGCTCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp ACTAAAACCTCTCCATCCTACCAAATTGGAAGTGTCACCAGGGGCTaGGAAACCAGCCACACAGAGATGGGAACCCTGACCAATCGCCAA +
Preference number: 1 (lower is better)
Translates to: TKTSPSYQIGSVTRG*ETSHTEMGTLTNRQ
Trigger: TTGGCGATTGGTCAGGGTTCCCATCTCTGTGTGGCTGGTTTCGCAGCCCCTGGTGACACTTCCAATTTGGTAGGATGGAGAGGTTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp TTAACTGGATCCAGAGGGCGTCTTTCGGGACCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTCCCAAGGCCGCATGAGTACTTAAGC +
Preference number: 1 (lower is better)
Translates to: LTGSRGRLSGPVSPD*TDLFLFPRPHEYLS
Trigger: GCTTAAGTACTCATGCGGCCTTGGGAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGGTCCCGAAAGACGCCCTCTGGATCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR CCA 90 bp GATACACCAGGAAAGCACCACTGTGAACTATCGAGCCTTGGACACTaGGACTCCGGACCTACCCAATCACTGACGAAAACGCCACATTCA +
Preference number: 1 (lower is better)
Translates to: DTPGKHHCELSSLGH*DSGPTQSLTKTPHS
Trigger: TGAATGTGGCGTTTTCGTCAGTGATTGGGTAGGTCCGGAGTCCCAGTGTCCAAGGCTCGATAGTTCACAGTGGTGCTTTCCTGGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GGGGGCCAGGCTTCCCTGAAGATCTGGGACTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTCATGCCAAATGTACATTTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: GGQASLKIWDWRHPQ*LARNDFMPNVHFPL
Trigger: CAGAGGAAAATGTACATTTGGCATGAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGCCTGGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GCCCAGCAAAGGCCTCAAATTTCAGAGAAATCACCCACCAGCCATTaGATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACAATACC +
Preference number: 1 (lower is better)
Translates to: AQQRPQISEKSPTSH*IVVRTALTLHVYNT
Trigger: GGTATTGTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGATTTCTCTGAAATTTGAGGCCTTTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 90 bp CTAAATCAACATGTCCTTCTGGTCAATAGAACTGGTCCTGAACTGTaGAGGGCCTGCTGCTGTGCCTGCTGTTTTATGTGCCAGGGCAGT +
Preference number: 1 (lower is better)
Translates to: LNQHVLLVNRTGPEL*RACCCACCFMCQGS
Trigger: ACTGCCCTGGCACATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAGTTCAGGACCAGTTCTATTGACCAGAAGGACATGTTGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 90 bp GCAGCAAAGAAAATCCGAACCGAAAGCGTGAAACATGAGGTGCTATaGGATGCCTTTGGACATGACTCGAGAGCGAGGCTAAAGCACAGA +
Preference number: 1 (lower is better)
Translates to: AAKKIRTESVKHEVL*DAFGHDSRARLKHR
Trigger: TCTGTGCTTTAGCCTCGCTCTCGAGTCATGTCCAAAGGCATCGCATAGCACCTCATGTTTCACGCTTTCGGTTCGGATTTTCTTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 90 bp AAATGTGGCCTTCTCTGGCAGCAAAGAAAATCCGAACCGAAAGCGTaGAACATGAGGTGCTATGCGATGCCTTTGGACATGACTCGAGAG +
Preference number: 1 (lower is better)
Translates to: KCGLLWQQRKSEPKA*NMRCYAMPLDMTRE
Trigger: CTCTCGAGTCATGTCCAAAGGCATCGCATAGCACCTCATGTTTCACGCTTTCGGTTCGGATTTTCTTTGCTGCCAGAGAAGGCCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 90 bp CACTTTGTTTATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAATGAATTCTCGGAGGCACGTGACTTT +
Preference number: 1 (lower is better)
Translates to: HFVYLLLRGHPPIRV*GTVHPNEFSEARDF
Trigger: AAAGTCACGTGCCTCCGAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATAAACAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR GCA 90 bp CAAGCATCCCTTTTGACGTGTTTGCCAAGCAGCTTTGGCAAGTGTTaGCACATTAAGCACACAGCAGGAAGACTCACACGGTATGTGCAA +
Preference number: 1 (lower is better)
Translates to: QASLLTCLPSSFGKC*HIKHTAGRLTRYVQ
Trigger: TTGCACATACCGTGTGAGTCTTCCTGCTGTGTGCTTAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAACACGTCAAAAGGGATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GCTTCGTGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATaGTTGTTACTTAAGCACCTGTGTATTTCCAAATCAGATTTAATG +
Preference number: 1 (lower is better)
Translates to: ASCQPFDSSGGLGCT*LLLKHLCISKSDLM
Trigger: CATTAAATCTGATTTGGAAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp ATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTGAGGTACAGTaGATCCTAATGAATTCTGTGGGAACAGAAACAACAGTAAAGACG +
Preference number: 1 (lower is better)
Translates to: ICSSEGIHQSGFEVQ*ILMNSVGTETTVKT
Trigger: CGTCTTTACTGTTGTTTCTGTTCCCACAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 90 bp CACTTTGTTTATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAATGAATTCTTTTCCTTTTCCCAAGGC +
Preference number: 1 (lower is better)
Translates to: HFVYLLLRGHPPIRV*GTVHPNEFFSFSQG
Trigger: GCCTTGGGAAAAGGAAAAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATAAACAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201528.2
3UTR TCA 90 bp AACAACAGTAAAGACGAGAGAGAAAACAGCTGGTTTTTGGACAGATaGTACGAAGGCAGCTTAGCCTACACCAGAGGCAACTATCAGCGG +
Preference number: 1 (lower is better)
Translates to: NNSKDERENSWFLDR*YEGSLAYTRGNYQR
Trigger: CCGCTGATAGTTGCCTCTGGTGTAGGCTAAGCTGCCTTCGTATCATCTGTCCAAAAACCAGCTGTTTTCTCTCTCGTCTTTACTGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 90 bp CACTTTGTTTATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAATGAATTCTGTGGGAACAGAAACAAC +
Preference number: 1 (lower is better)
Translates to: HFVYLLLRGHPPIRV*GTVHPNEFCGNRNN
Trigger: GTTGTTTCTGTTCCCACAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATAAACAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 90 bp GACTCCCTGTACCGCAAAACACAGAACTCAAATGAGGGTCATGTTTaGGTTCTGGACATAATTCACACCTTCCCAGGAGTTTTGTCCACT +
Preference number: 1 (lower is better)
Translates to: DSLYRKTQNSNEGHV*VLDIIHTFPGVLST
Trigger: AGTGGACAAAACTCCTGGGAAGGTGTGAATTATGTCCAGAACGCAAACATGACCCTCATTTGAGTTCTGTGTTTTGCGGTACAGGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp CATCTTTGCACAGGGAATCTAGAAAAGCGGAGGGAACTAGACTTCTaGTATGTCCACTTTAAGAGTTTCTGGTCTCCCTCACAAGGTGTC +
Preference number: 1 (lower is better)
Translates to: HLCTGNLEKRRELDF*YVHFKSFWSPSQGV
Trigger: GACACCTTGTGAGGGAGACCAGAAACTCTTAAAGTGGACATATCAGAAGTCTAGTTCCCTCCGCTTTTCTAGATTCCCTGTGCAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 90 bp TACATGCTTTGGACTCTAAGTGACATGGGAATGGACATTCACAACTaGAGCTCTTACACAAGAAACCACACAGCACTGGGACGATTGTGT +
Preference number: 1 (lower is better)
Translates to: YMLWTLSDMGMDIHN*SSYTRNHTALGRLC
Trigger: ACACAATCGTCCCAGTGCTGTGTGGTTTCTTGTGTAAGAGCTCCAGTTGTGAATGTCCATTCCCATGTCACTTAGAGTCCAAAGCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 90 bp AAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTGCACAGCTGGATaGGGCGTTTTCATCCATGACAATGGGAAACAGAAGTTTTATATA +
Preference number: 1 (lower is better)
Translates to: KGNSELRPRRMCTAG*GVFIHDNGKQKFYI
Trigger: TATATAAAACTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp TGTGGCAGTGGGTCAAGAGTTTTAAGTCCGAGAATGTGTAAAGTGTaGCGGAATTACATGCTTTGGACTCTAAGTGACATGGGAATGGAC +
Preference number: 1 (lower is better)
Translates to: CGSGSRVLSPRMCKV*RNYMLWTLSDMGMD
Trigger: GTCCATTCCCATGTCACTTAGAGTCCAAAGCATGTAATTCCGTCACACTTTACACATTCTCGGACTTAAAACTCTTGACCCACTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp TGGGTATCGCTAGCAGATGTACTTTTGTTGCAATTTGGGGAATGGTaGTTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCT +
Preference number: 1 (lower is better)
Translates to: WVSLADVLLLQFGEW*FNKKNTALAVSYEA
Trigger: AGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACATCTGCTAGCGATACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp GATTCTAGAACTTTCCAACAGCCTGGTCATGCTGGAATTTTAGACTaGTCCACAGGACTGATACTAGTGAATTCGTGTATTCCCGTGGCA +
Preference number: 1 (lower is better)
Translates to: DSRTFQQPGHAGILD*STGLILVNSCIPVA
Trigger: TGCCACGGGAATACACGAATTCACTAGTATCAGTCCTGTGGATCAGTCTAAAATTCCAGCATGACCAGGCTGTTGGAAAGTTCTAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 90 bp GCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAACACTTGTaGGAAGCAGGCATTTTAATTTCGAAAATGAAGGATACACCAGGA +
Preference number: 1 (lower is better)
Translates to: AIILLARSVPEVKHL*EAGILISKMKDTPG
Trigger: TCCTGGTGTATCCTTCATTTTCGAAATTAAAATGCCTGCTTCTCACAAGTGTTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp AGAAGCCCCTGGCTGATAATGCGAGTAGCTTTGCCATCAGTTAAGTaGCATTTCCCTCCAATGTTTCAAGTGGTTATTTTTATCCAGTAC +
Preference number: 1 (lower is better)
Translates to: RSPWLIMRVALPSVK*HFPPMFQVVIFIQY
Trigger: GTACTGGATAAAAATAACCACTTGAAACATTGGAGGGAAATGTCACTTAACTGATGGCAAAGCTACTCGCATTATCAGCCAGGGGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp GTACAGTGCATCCTAATGAATTCTTTTCCTTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCTGTGGTGAAGACAAATCTGATGAGGTA +
Preference number: 1 (lower is better)
Translates to: VQCILMNSFPFPKAA*VLKLICGEDKSDEV
Trigger: TACCTCATCAGATTTGTCTTCACCACAGATGAGCTTAAGTACTCATGCGGCCTTGGGAAAAGGAAAAGAATTCATTAGGATGCACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201528.2
3UTR TCA 90 bp ACGAAGTATGACTTAAGGCTACGGAAGCTGTGCGTTAGGAACTTATaGAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGTTTCC +
Preference number: 1 (lower is better)
Translates to: TKYDLRLRKLCVRNL*NEALENGFQSLDVS
Trigger: GGAAACATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGCACAGCTTCCGTAGCCTTAAGTCATACTTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 90 bp CAAGGCCAAAGCTATTATCTACACTCTCTAGGGAATATTTGCTGCTaGAAAGAAAGTGTCTGCCCCAAGTGTCTTTACCCAGCTTTTTAT +
Preference number: 1 (lower is better)
Translates to: QGQSYYLHSLGNICC*KESVCPKCLYPAFY
Trigger: ATAAAAAGCTGGGTAAAGACACTTGGGGCAGACACTTTCTTTTCAGCAGCAAATATTCCCTAGAGAGTGTAGATAATAGCTTTGGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 90 bp GGAATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATaGAGCTTAGAATCAAAAATTTTTGGTAATCTAGTGCCTTCAGTA +
Preference number: 1 (lower is better)
Translates to: GMVIQQEEHSPCSQL*SLESKIFGNLVPSV
Trigger: TACTGAAGGCACTAGATTACCAAAAATTTTTGATTCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 90 bp GATCTAGGGAAAGCTACATCTTGGGCTGAGTACAGAGACAAGCCTTaGAATCGGCAATGTGGTATAAATACATTTAAATTAAATAAAGTG +
Preference number: 1 (lower is better)
Translates to: DLGKATSWAEYRDKP*NRQCGINTFKLNKV
Trigger: CACTTTATTTAATTTAAATGTATTTATACCACATTGCCGATTGCAAGGCTTGTCTCTGTACTCAGCCCAAGATGTAGCTTTCCCTAGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 90 bp TTTTGGAGAGAGTCAGTGAACACTCTCAAAAAGGCAGAAGTTTGTTaGTTTCTTTGCATATATTGCATTTCTATGTCTATGTTGTCAGAG +
Preference number: 1 (lower is better)
Translates to: FWRESVNTLKKAEVC*FLCIYCISMSMLSE
Trigger: CTCTGACAACATAGACATAGAAATGCAATATATGCAAAGAAAGCAACAAACTTCTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCCACAGCGAGGAGGTTaGCCTTCTGATGGACACAGT +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGPQRGG*PSDGHS
Trigger: ACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCTGTGGAGGGCCTGCTaGTGTGCCTGCTGTTTTATG +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGLWRAC*CACCFM
Trigger: CATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCTCACCCACCAGCCATTaGATAGTTGTCAGAACGGCC +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGSPTSH*IVVRTA
Trigger: GGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCTTGCTTCCCTCGGTGGGCTGCTCGGCGGGCTGCGGCAGGAGCTGGTTGTGGTACATGGCCTCTGTTCTaGATTCTTCCCGTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: ACFPRWAARRAAAGAGCGTWPLF*ILPVSV
Trigger: AACGCTGACGGGAAGAATCCAGAACAGAGGCCATGT...ACCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCACCCCAGCCTTAAATaGATGCCCACACAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGHPSLK*MPTQGK
Trigger: CTTTCCCTGTGTGGGCATCCATTTAAGGCTGGGGTG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTGCACAGCTGGATGGGGCCCTGGAGACCAGCTCTaGTCAGGGGGCCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: QKGNSELRPRRMCTAGWGPGDQL*SGGQAS
Trigger: GGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGG...GCCCCATCCAGCTGTGCACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCCGCCTATGCAGAGATaGCAATTAGAAGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGPPMQR*QLEAAL
Trigger: CAATGCAGCTTCTAATTGTCATCTCTGCATAGGCGG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTGCACAGCTGGATGGGGCGGCTGCGGCAGGAGCTaGTTGTGGTGCAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: QKGNSELRPRRMCTAGWGGCGRS*LWCSST
Trigger: AGTGCTGCTGCACCACAACCAGCTCCTGCCGCAGCC...GCCCCATCCAGCTGTGCACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCAAGGATGTTAAGTCTTaGACTACAGGGGCAAACCCA +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGKDVKS*TTGANP
Trigger: TGGGTTTGCCCCTGTAGTTCAAGACTTAACATCCTT...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGGTGCACCGGGGAGGCTaGGAGAGGGTCCACATCAGC +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKVHRGG*ERVHIS
Trigger: GCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCAC...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCCCTGGAGACCAGCTCTaGTCAGGGGGCCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVPGDQL*SGGQAS
Trigger: GGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGG...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AGATGCCGTCGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGCCTGGAGACCAGCTCTaGTCAGGGGGCCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: RCRRSCPAFDLTQQPACGPGDQL*SGGQAS
Trigger: GGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGG...CCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAACTTCCCTCGGTGGGCTaGTCGGCGGGCTGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKLPSVG*SAGCGR
Trigger: CCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAG...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCTACACAGATAAGAAGTaGGAGCCTCTGCATCTCTGT +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGYTDKK*EPLHLC
Trigger: ACAGAGATGCAGAGGCTCGCACTTCTTATCTGTGTA...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR TCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCTTGTCCAAGCTTACTaGCTAAATAAACCACCAAAG +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGLVQAY*LNKPPK
Trigger: CTTTGGTGGTTTATTTAGTCAGTAAGCTTGGACAAG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCAGACCGAGGAGGATGTaGACAGCTGGATGGGGCGTT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIRPRRM*TAGWGV
Trigger: AACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCT...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACAGACCGAGGAGGATGTaGACAGCTGGATGGGGCGTT +
Preference number: 2 (lower is better)
Translates to: SPTSHCIVVRTALTLHVYRPRRM*TAGWGV
Trigger: AACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCT...GTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCCTTCTCCATTTTGTGTaGACGCGCGCGCGCACACAC +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCILLHFV*TRARTH
Trigger: GTGTGTGCGCGCGCGCGTGCACACAAAATGGAGAAG...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTGGGCAGGGGTAGGCTaGACAGTGACTGAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKWAGVG*TVTEFP
Trigger: GGGGAACTCAGTCACTGTCCAGCCTACCCCTGCCCA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp CAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTaGGCATGCTTTCAAAGGATGTTAAGTCTTGAACTACAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: QQALLPRGTGQAHLA*ACFQRMLSLELQGQ
Trigger: TTGCCCCTGTAGTTCAAGACTTAACATCCTTTGAAAGCATGCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp TGCTGTGCCTGCTGTTTTATGTGCCAGGGCAGTGTTCTGGTGGCCTaGTCGCGGTCCTACGTGTCTGTGTTTATCCTGAAGCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: CCACCFMCQGSVLVA*SRSYVSVFILKLPH
Trigger: ATGGGGCAGCTTCAGGATAAACACAGACACGTAGGACCGCGACAAGGCCACCAGAACACTGCCCTGGCACATAAAACAGCAGGCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGACCTGGAGACCAGCTCTaGTCAGGGGGCCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRPGDQL*SGGQAS
Trigger: GGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGG...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCAGATGTACTTTTGTTaGAATTTGGGGAATGGTGAT +
Preference number: 2 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGQMYFC*NLGNGD
Trigger: ATCACCATTCCCCAAATTGCAACAAAAGTACATCTG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCGGCTGCTCGGCGGGCTaGGGCAGGAGCTGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIGCSAG*GRSWLW
Trigger: CCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCC...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAGGCTGCTCGGCGGGCTaGGGCAGGAGCTGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRGCSAG*GRSWLW
Trigger: CCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCC...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCACTTCCCTCGGTGGGCTaGTCGGCGGGCTGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: IVKVIQALSQLKLMSAYALPSVG*SAGCGR
Trigger: CCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAG...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR CAA 90 bp GGTCCACATCAGCCAGGTGGCCATACTCACTGGCTGATGAGGTGTTaGGAGTCGGGAAGCTCCCCGAGAGCAGATAATTTTGGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: GPHQPGGHTHWLMRC*ESGSSPRADNFGES
Trigger: ACTCTCTCCAAAATTATCTGCTCTCGGGGAGCTTCCCGACTCCAAACACCTCATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTCAAAGGAAGCTCAGGTaGGTAGCCCGGCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPQRKLR*VARQEE
Trigger: CTCTTCCTGCCGGGCTACTCACCTGAGCTTCCTTTG...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CTAGTCCCCAGATCCGTCCTGTGTCTTGCTGAAGACCTCATCCTGGGAAGCCTGATGTTGTCAGAGGTCTaGCTCTGGACCCCTTTCACA +
Preference number: 2 (lower is better)
Translates to: LVPRSVLCLAEDLILGSLMLSEV*LWTPFT
Trigger: TGTGAAAGGGGTCCAGAGTCAGACCTCTGACAACAT...CAGGCTTCCCAGGATGAGGTCTTCAGCAAGACACAGGACGGATCTGGGGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTCGCCCCTGTCGGGCATaGCCTACAGCATCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCRPCRA*PTASLN
Trigger: GTTCAGCGATGCTGTAGGTCATGCCCGACAGGGGCG...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AGATGCCGTCGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGTGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RCRRSCPAFDLTQQPACGCSTAA*FPRWAA
Trigger: AGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACA...CCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGAGCCTTTAAAGAGGTaGAGGAGGAACTCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIEPLKR*RRNSGL
Trigger: GAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTCTCAACACCCACAAATaGGCTGATGAGAAATGGGGC +
Preference number: 2 (lower is better)
Translates to: VQEAAGALCTSEASGKNPLNTHK*ADEKWG
Trigger: GCCCCATTTCTCATCAGCCCATTTGTGGGTGTTGAG...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACTCCACATCAGCCAGGTaGCCATACTCACTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SPTSHCIVVRTALTLHVYSTSAR*PYSLAD
Trigger: ATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGA...GTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATGGCAGGAGCTGGTTGTaGTGCAGCAGCACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHGRSWL*CSSTVF
Trigger: GAAGACAGTGCTGCTGCACCACAACCAGCTCCTGCC...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGCTGCGGCAGGAGCTaGTTGTGGTGCAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRGCGRS*LWCSST
Trigger: AGTGCTGCTGCACCACAACCAGCTCCTGCCGCAGCC...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCATTTTCCTCACCAATaGCAGGGCACAGCTGCATCC +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKHFPHQ*QGTAAS
Trigger: GGATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATG...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGCTGGTCTCAGTCCCCTaGCAGCTCATTCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPLVSVP*QLIPGP
Trigger: TGGCCCTGGAATGAGCTGTCAGGGGACTGAGACCAG...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCCGCCCCTGTCGGGCATaGCCTACAGCATCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: SQCSPQVQSVISISNNYSRPCRA*PTASLN
Trigger: GTTCAGCGATGCTGTAGGTCATGCCCGACAGGGGCG...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AGATGCCGTCGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGTCCGAACCGAAAGCGTaGAACATGAGGTGCTATGCG +
Preference number: 2 (lower is better)
Translates to: RCRRSCPAFDLTQQPACGSEPKA*NMRCYA
Trigger: CGCATAGCACCTCATGTTTCACGCTTTCGGTTCGGA...CCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGACCTGGAGACCAGCTCTaGTCAGGGGGCCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRPGDQL*SGGQAS
Trigger: GGAAGCCTGGCCCCCTGAGCAGAGCTGGTCTCCAGG...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCACCACAATCCAATTGTaGCAGTGCCGACCACCTGAT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCITTIQL*QCRPPD
Trigger: ATCAGGTGGTCGGCACTGGCACAATTGGATTGTGGT...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTCCGACAGAACACGTGTaGTCTTCAGGCAGCAGGGCG +
Preference number: 2 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCPTEHV*SSGSRA
Trigger: CGCCCTGCTGCCTGAAGAGCACACGTGTTCTGTCGG...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CCA 90 bp CTAGTCCCCAGATCCGTCCTGTGTCTTGCTGAAGACCTCATCCTGGGAAGCCTGTGGGAACTGTGGCAGTaGGTCAAGAGTTTTAAGTCC +
Preference number: 2 (lower is better)
Translates to: LVPRSVLCLAEDLILGSLWELWQ*VKSFKS
Trigger: GGACTTAAAACTCTTGACCCACTGCCACAGTTCCCA...CAGGCTTCCCAGGATGAGGTCTTCAGCAAGACACAGGACGGATCTGGGGACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CTGGTGATCCATCCCTTCATAAAACGAGCCACCGTTGTGCAGGAAAGTCCCCACTCCACATCAGCCAGGTaGCCATACTCACTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: LVIHPFIKRATVVQESPHSTSAR*PYSLAD
Trigger: ATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGA...GTGGGGACTTTCCTGCACAACGGTGGCTCGTTTTATGAAGGGATGGATCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TTTATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTGAGGTACAGTGCATCTCGGTACCACGTAGATaGGCCACAGGAAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: FICSSEGIHQSGFEVQCISVPRR*ATGSLE
Trigger: TTCCAGGCTTCCTGTGGCCCATCTACGTGGTACCGA...GATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CAA 90 bp CACAACTGGAGCTCTTACACAAGAAACCACACAGCACTGGGACGATaGTGTCCACTAGTCCCCAGATCCGTCCTGTGTCTTGCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: HNWSSYTRNHTALGR*CPLVPRSVLCLAED
Trigger: GTCTTCAGCAAGACACAGGACGGATCTGGGGACTAGTGGACACAATCGTCCCAGTGCTGTGTGGTTTCTTGTGTAAGAGCTCCAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCTCAAGCATCCCTTTTaGCGTGTTTGCCAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKLKHPF*RVCQAA
Trigger: AGCTGCTTGGCAAACACGTCAAAAGGGATGCTTGAG...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAAT +
Preference number: 2 (lower is better)
Translates to: SPTSHCIVVRTALTLHVYPPIRV*GTVHPN
Trigger: ATTAGGATGCACTGTACCTCAAACCCTGATTGGTGG...GTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGCCACAGCGAGGAGGTTaGCCTTCTGATGGACACAGT +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILPQRGG*PSDGHS
Trigger: ACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGG...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGACCACAATCCAATTGTaGCAGTGCCGACCACCTGAT +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKTTIQL*QCRPPD
Trigger: ATCAGGTGGTCGGCACTGGCACAATTGGATTGTGGT...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCAAGTGGATTCCTGTTTaGGAACTGTGGCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRKWIPV*ELWQWV
Trigger: GACCCACTGCCACAGTTCCCAAACAGGAATCCACTT...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCAAGTGGATTCCTGTTTaGGAACTGTGGCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVKWIPV*ELWQWV
Trigger: GACCCACTGCCACAGTTCCCAAACAGGAATCCACTT...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCACTCAGGCCTCTCCATaGGGACTGTCTGATTCCTTA +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRTQASP*GLSDSL
Trigger: TAAGGAATCAGACAGTCCCCATGGAGAGGCCTGAGT...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTCACCCCAGCCTTAAATaGATGCCCACACAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPHPSLK*MPTQGK
Trigger: CTTTCCCTGTGTGGGCATCCATTTAAGGCTGGGGTG...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp TCAGAGAAATCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTaGACGCTCCACGTCTACAATACCAGACCCCTGATCAACAGCAGA +
Preference number: 2 (lower is better)
Translates to: SEKSPTSHCIVVRTA*TLHVYNTRPLINSR
Trigger: TCTGCTGTTGATCAGGGGTCTGGTATTGTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGATTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCAGGTGTACCCACAAATaGTTTAGATACCCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIRCTHK*FRYPLP
Trigger: AGGAAGGGGGTATCTAAATCATTTGTGGGTACACCT...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGTTCGTGCCAGCCCTTTaGCAGCTCTGGAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVFVPAL*QLWRPG
Trigger: CCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAA...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGATTCGTGCCAGCCCTTTaGCAGCTCTGGAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGFVPAL*QLWRPG
Trigger: CCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAA...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTGTGCACCGGGGAGGCTaGGAGAGGGTCCACATCAGC +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPVHRGG*ERVHIS
Trigger: GCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCAC...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGACCTACAGCATCGCTaGACACTTTGTTTATCTGCT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIDLQHR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTTTTATATGGGTCATCTaGACTCAGACCCTCAAGCTT +
Preference number: 2 (lower is better)
Translates to: VQEAAGALCTSEASGKNPFIWVI*TQTLKL
Trigger: AAGCTTGAGGGTCTGAGTTCAGATGACCCATATAAA...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAAGACCGAGGAGGATGTaGACAGCTGGATGGGGCGTT +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGRPRRM*TAGWGV
Trigger: AACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCT...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGTCAGGCCAAGCTTCGTaGCAGCCCTTTGACAGCTCT +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPSGQAS*QPFDSS
Trigger: AGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGA...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTTGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFCSTAA*FPRWAA
Trigger: AGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACA...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGCCTGCTGCTGTGCCTaGTGTTTTATGTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGACCCA*CFMCQG
Trigger: GCCCTGGCACATAAAACAGCAGGCACAGCAGCAGGC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTGAACTGTGGAGGGCCTaGTGCTGTGCCTGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCELWRA*CCACCF
Trigger: AAAACAGCAGGCACAGCAGCAGGCCCTCCACAGTTC...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTGGGAACTGTGGCAGTaGGTCAAGAGTTTTAAGTCC +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKWELWQ*VKSFKS
Trigger: GGACTTAAAACTCTTGACCCACTGCCACAGTTCCCA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGCCAGTAATTTAGTGTaGGAATTCCAGTTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIASNLV*EFQFSQ
Trigger: CTGGGAGAACTGGAATTCCCACACTAAATTACTGGC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp AGCCCAGCAAAGGCCTCAAATTTCAGAGAAATCACCCACCAGCCATaGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACAATAC +
Preference number: 2 (lower is better)
Translates to: SPAKASNFREITHQP*HSCQNGLDAPRLQY
Trigger: GTATTGTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGATTTCTCTGAAATTTGAGGCCTTTGCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCGCTTTGGACTCTAAGTaGCATGGGAATGGACATTCA +
Preference number: 2 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVALDSK*HGNGHS
Trigger: TGAATGTCCATTCCCATGTCACTTAGAGTCCAAAGC...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCGCTTTGGACTCTAAGTaGCATGGGAATGGACATTCA +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRALDSK*HGNGHS
Trigger: TGAATGTCCATTCCCATGTCACTTAGAGTCCAAAGC...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AGATGCCGTCGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGGCTTTGGACTCTAAGTaGCATGGGAATGGACATTCA +
Preference number: 2 (lower is better)
Translates to: RCRRSCPAFDLTQQPACGALDSK*HGNGHS
Trigger: TGAATGTCCATTCCCATGTCACTTAGAGTCCAAAGC...CCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCTGGGTCCACTGTAAATaGCAGCTCATTTACCCATTT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIWVHCK*QLIYPF
Trigger: AAATGGGTAAATGAGCTGTCATTTACAGTGGACCCA...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGGCACAGCTGCATCCTaGGATATTTTTAACTCAAGT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIGTAAS*DIFNSS
Trigger: ACTTGAGTTAAAAATATCTCAGGATGCAGCTGTGCC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGCTGGTCTCAGTCCCCTaGCAGCTCATTCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVLVSVP*QLIPGP
Trigger: TGGCCCTGGAATGAGCTGTCAGGGGACTGAGACCAG...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGACTGGTCTCAGTCCCCTaGCAGCTCATTCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGLVSVP*QLIPGP
Trigger: TGGCCCTGGAATGAGCTGTCAGGGGACTGAGACCAG...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCTACAAACCCACATGTaGAAGCTGTCACAGACTAAC +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKLQTHM*KLSQTN
Trigger: GTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAG...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGACAGAGATGGGAACCCTaGCCAATCGCCAAGGCTGTC +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRQRWEP*PIAKAV
Trigger: GACAGCCTTGGCGATTGGTCAGGGTTCCCATCTCTG...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAAGAAACCACACAGCACTGGGACGATTGTGTCCACTAGTCCCCAGATCCGTCCAAGAAATCATGGATTaGGAGTGGTTGGAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: TRNHTALGRLCPLVPRSVQEIMD*EWLESR
Trigger: TCTGGACTCCAACCACTCTCAATCCATGATTTCTTG...GACGGATCTGGGGACTAGTGGACACAATCGTCCCAGTGCTGTGTGGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTTTGGAGAGAGTCAGTaGACACTCTCAAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKFGESQ*TLSKRQ
Trigger: CTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGCTGGAATTTTAGACTaGTCCACAGGACTGATACTA +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIAGILD*STGLIL
Trigger: TAGTATCAGTCCTGTGGATCAGTCTAAAATTCCAGC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKWRHPQ*LARNDF
Trigger: GAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCCCACAGCGAGGAGGTTaGCCTTCTGATGGACACAGT +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGPQRGG*PSDGHS
Trigger: ACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGG...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATCCACAGCGAGGAGGTTaGCCTTCTGATGGACACAGT +
Preference number: 2 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNPQRGG*PSDGHS
Trigger: ACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGG...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTTCACCCACCAGCCATTaGATAGTTGTCAGAACGGCC +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFSPTSH*IVVRTA
Trigger: GGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAAGACCGAGGAGGATGTaGACAGCTGGATGGGGCGTT +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTRPRRM*TAGWGV
Trigger: AACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCT...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAAACGAGCCACCGTTGTaGAGGAAAGTCCCCACGGCC +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRNEPPL*RKVPTA
Trigger: GGCCGTGGGGACTTTCCTGCACAACGGTGGCTCGTT...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATTGGGAACTGTGGCAGTaGGTCAAGAGTTTTAAGTCC +
Preference number: 2 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHWELWQ*VKSFKS
Trigger: GGACTTAAAACTCTTGACCCACTGCCACAGTTCCCA...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAA +
Preference number: 2 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRASLKI*DWRHPQ
Trigger: TTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGC...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAGAGCCTTTAAAGAGGTaGAGGAGGAACTCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKEPLKR*RRNSGL
Trigger: GAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTC...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTTGGGCTGATGAGAAATaGGGCCTTATCAAATGTAAA +
Preference number: 2 (lower is better)
Translates to: VQEAAGALCTSEASGKNPWADEK*GLIKCK
Trigger: TTTACATTTGATAAGGCCCCATTTCTCATCAGCCCA...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGGCCAGTAATTTAGTGTaGGAATTCCAGTTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKASNLV*EFQFSQ
Trigger: CTGGGAGAACTGGAATTCCCACACTAAATTACTGGC...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGAACGCTGAGGCACCTCTaGCCACTTGTCCTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGTLRHL*PLVLVP
Trigger: TGGCACCAGGACAAGTGGCCAGAGGTGCCTCAGCGT...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCGGCAGGAGCTGGTTGTaGTGCAGCAGCACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIGRSWL*CSSTVF
Trigger: GAAGACAGTGCTGCTGCACCACAACCAGCTCCTGCC...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGGCACGTGACTTTAACTaGATCCAGAGGGCGTCTTTC +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILARDFN*IQRASF
Trigger: GAAAGACGCCCTCTGGATCCAGTTAAAGTCACGTGC...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CCCCCGAAAATCCTAAAGTGGATTCCTGTTTGGGAACTGTGGCAGTGGGTCAAGGCTTTGGACTCTAAGTaGCATGGGAATGGACATTCA +
Preference number: 2 (lower is better)
Translates to: PPKILKWIPVWELWQWVKALDSK*HGNGHS
Trigger: TGAATGTCCATTCCCATGTCACTTAGAGTCCAAAGC...CTTGACCCACTGCCACAGTTCCCAAACAGGAATCCACTTTAGGATTTTCGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCCTGGGAACTCTGAAATaGAGTCTTAGGAAATCGAAG +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRLGTLK*SLRKSK
Trigger: CTTCGATTTCCTAAGACTTCATTTCAGAGTTCCCAG...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCTGGGTCCACTGTAAATaGCAGCTCATTTACCCATTT +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRWVHCK*QLIYPF
Trigger: AAATGGGTAAATGAGCTGTCATTTACAGTGGACCCA...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTGCTCCAGATGTAATTaGCAACAGCTCATCAGTAGT +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKCSRCN*QQLISS
Trigger: ACTACTGATGAGCTGTTGTCAATTACATCTGGAGCA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCCATTTTCCTCACCAATaGCAGGGCACAGCTGCATCC +
Preference number: 2 (lower is better)
Translates to: SQCSPQVQSVISISNNYSHFPHQ*QGTAAS
Trigger: GGATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATG...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTGAGGTTAAACACTTGTaGGAAGCAGGCATTTTAATT +
Preference number: 2 (lower is better)
Translates to: VQEAAGALCTSEASGKNPEVKHL*EAGILI
Trigger: AATTAAAATGCCTGCTTCTCACAAGTGTTTAACCTC...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCTTGCCATCAGTTAAGTaGCATTTCCCTCCAATGTTT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCILPSVK*HFPPMF
Trigger: AAACATTGGAGGGAAATGTCACTTAACTGATGGCAA...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPWRHPQ*LARNDF
Trigger: GAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCA...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHWRHPQ*LARNDF
Trigger: GAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCA...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCTCACCCACCAGCCATTaGATAGTTGTCAGAACGGCC +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGSPTSH*IVVRTA
Trigger: GGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GTCAGCATTGTAGTCCTTAGTTTCCACATATGCACAACAGCTAGGTTCCCGACATCACCCACCAGCCATTaGATAGTTGTCAGAACGGCC +
Preference number: 2 (lower is better)
Translates to: VSIVVLSFHICTTARFPTSPTSH*IVVRTA
Trigger: GGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA...TGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACAGACCGAGGAGGATGTaGACAGCTGGATGGGGCGTT +
Preference number: 2 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNRPRRM*TAGWGV
Trigger: AACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCT...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTCAGGCCAAGCTTCGTaGCAGCCCTTTGACAGCTCT +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGISGQAS*QPFDSS
Trigger: AGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGA...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACATCAGGCCAAGCTTCGTaGCAGCCCTTTGACAGCTCT +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTSGQAS*QPFDSS
Trigger: AGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGA...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGTGGGAACTGTGGCAGTaGGTCAAGAGTTTTAAGTCC +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILWELWQ*VKSFKS
Trigger: GGACTTAAAACTCTTGACCCACTGCCACAGTTCCCA...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAA +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGASLKI*DWRHPQ
Trigger: TTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGC...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAA +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGASLKI*DWRHPQ
Trigger: TTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTACATGGCCTCTGTTCTaGATTCTTCCCGTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCTWPLF*ILPVSV
Trigger: AACGCTGACGGGAAGAATCCAGAACAGAGGCCATGT...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTACTCAGGCCTCTCCATaGGGACTGTCTGATTCCTTA +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFTQASP*GLSDSL
Trigger: TAAGGAATCAGACAGTCCCCATGGAGAGGCCTGAGT...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTACGCTGAGGCACCTCTaGCCACTTGTCCTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPTLRHL*PLVLVP
Trigger: TGGCACCAGGACAAGTGGCCAGAGGTGCCTCAGCGT...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGAGGCTCACCTGGCCTTaGCATGCTTTCAAAGGATGT +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPRLTWP*HAFKGC
Trigger: ACATCCTTTGAAAGCATGCCAAGGCCAGGTGAGCCT...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGACAGGCCAGGCTCACCTaGCCTTGGCATGCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRQARLT*PWHAFK
Trigger: TTTGAAAGCATGCCAAGGCCAGGTGAGCCTGGCCTG...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCGTACATTTTCCTCTGTaGTATAACACACCCCAAATC +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRVHFPL*YNTPQI
Trigger: GATTTGGGGTGTGTTATATCACAGAGGAAAATGTAC...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACCGCCTATGCAGAGATaGCAATTAGAAGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEEPPMQR*QLEAAL
Trigger: CAATGCAGCTTCTAATTGTCATCTCTGCATAGGCGG...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGAGGTGTACCCACAAATaGTTTAGATACCCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILRCTHK*FRYPLP
Trigger: AGGAAGGGGGTATCTAAATCATTTGTGGGTACACCT...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCGGTGGTAAACTAAGCTaGAGAAAACAGCAATCACAT +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRGGKLS*RKQQSH
Trigger: ATGTGATTGCTGTTTTCTTCAGCTTAGTTTACCACC...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAGAGCCAGCAGAAGGCTaGAACAATCCTAAGTGTTTG +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKEPAEG*NNPKCL
Trigger: CAAACACTTAGGATTGTTTCAGCCTTCTGCTGGCTC...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTATCCAGTACTTATATaGCTGAAAGGAGCCATCACT +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKYPVLI*LKGAIT
Trigger: AGTGATGGCTCCTTTCAGTCATATAAGTACTGGATA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGAGGGAACTAGACTTCTaGTATGTCCACTTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKRELDF*YVHFKS
Trigger: ACTCTTAAAGTGGACATATCAGAAGTCTAGTTCCCT...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACCACCAATCAGGGTTTaGGGTACAGTGCATCCTAAT +
Preference number: 2 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEEPPIRV*GTVHPN
Trigger: ATTAGGATGCACTGTACCTCAAACCCTGATTGGTGG...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCACCACAGCGAGGAGGTTaGCCTTCTGATGGACACAGT +
Preference number: 2 (lower is better)
Translates to: IVKVIQALSQLKLMSAYAPQRGG*PSDGHS
Trigger: ACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGG...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTAACAATGTGTCTGACTaGCAGAATGACGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPNNVSD*QNDVEK
Trigger: CTTTTCCACGTCATTCTGGCAGTCAGACACATTGTT...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACCAAGAGATCAGCATaGTTTTACTCCTCCACTCTC +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILTKRSA*FYSSTL
Trigger: GAGAGTGGAGGAGTAAAAGCATGCTGATCTCTTGGT...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCACCACAATCCAATTGTaGCAGTGCCGACCACCTGAT +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGTTIQL*QCRPPD
Trigger: ATCAGGTGGTCGGCACTGGCACAATTGGATTGTGGT...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGGACACACACTGCTGTTaGGACACATTTGCATTAGAG +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILDTHCC*DTFALE
Trigger: CTCTAATGCAAATGTGTCGCAACAGCAGTGTGTGTC...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCCAGATGTACTTTTGTTaGAATTTGGGGAATGGTGAT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIQMYFC*NLGNGD
Trigger: ATCACCATTCCCCAAATTGCAACAAAAGTACATCTG...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGGGTTTGAGGTACAGTaGATCCTAATGAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIGFEVQ*ILMNSF
Trigger: AAAAGAATTCATTAGGATGCACTGTACCTCAAACCC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201528.2
3UTR-3UTR GCA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGAACGAGCCACCGTTGTaGAGGAAAGTCCCCACGGCC +
Preference number: 2 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMNEPPL*RKVPTA
Trigger: GGCCGTGGGGACTTTCCTGCACAACGGTGGCTCGTT...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCAAGTGGATTCCTGTTTaGGAACTGTGGCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGKWIPV*ELWQWV
Trigger: GACCCACTGCCACAGTTCCCAAACAGGAATCCACTT...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGTGCACAGCTGGATGGGGCGTTTTCATCCATGACAATGGGAAACAGAAGTTTTAAGTGGATTCCTGTTTaGGAACTGTGGCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: CAQLDGAFSSMTMGNRSFKWIPV*ELWQWV
Trigger: GACCCACTGCCACAGTTCCCAAACAGGAATCCACTT...AAAACTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCACATTAATGCTATCCTaGATGTTATCCGGAGACAGT +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRTLMLS*MLSGDS
Trigger: ACTGTCTCCGGATAACATCCAGGATAGCATTAATGT...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGAAAGTTGCAAACTCGTaGAAGAGAAAACTCGATGGA +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKKVANS*KRKLDG
Trigger: TCCATCGAGTTTTCTCTTCCACGAGTTTGCAACTTT...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCAAAGTTGCAAACTCGTaGAAGAGAAAACTCGATGGA +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRKVANS*KRKLDG
Trigger: TCCATCGAGTTTTCTCTTCCACGAGTTTGCAACTTT...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp CACATTTGCATTAGAGCTGTGACTCAAGCATCCCTTTTGACGTGTTaGCCAAGCAGCTTTGGCAAGTGTTGCCACATTAAGCACACAGCA +
Preference number: 2 (lower is better)
Translates to: HICIRAVTQASLLTC*PSSFGKCCHIKHTA
Trigger: TGCTGTGTGCTTAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAACACGTCAAAAGGGATGCTTGAGTCACAGCTCTAATGCAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp CTGTTGCGACACATTTGCATTAGAGCTGTGACTCAAGCATCCCTTTaGACGTGTTTGCCAAGCAGCTTTGGCAAGTGTTGCCACATTAAG +
Preference number: 2 (lower is better)
Translates to: LLRHICIRAVTQASL*TCLPSSFGKCCHIK
Trigger: CTTAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAACACGTCAAAAGGGATGCTTGAGTCACAGCTCTAATGCAAATGTGTCGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTGTACATTTTCCTCTGTaGTATAACACACCCCAAATC +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPVHFPL*YNTPQI
Trigger: GATTTGGGGTGTGTTATATCACAGAGGAAAATGTAC...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTAGGGAACTAGACTTCTaGTATGTCCACTTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPRELDF*YVHFKS
Trigger: ACTCTTAAAGTGGACATATCAGAAGTCTAGTTCCCT...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAAGACCTACAGCATCGCTaGACACTTTGTTTATCTGCT +
Preference number: 2 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEEDLQHR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTC...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCCGAAAGCGTGAAACATaGGGTGCTATGCGATGCCTT +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIRKRET*GAMRCL
Trigger: AAGGCATCGCATAGCACCTCATGTTTCACGCTTTCG...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR TCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGGAATATTTGCTGCTaGAAAGAAAGTGTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGGNICC*KESVCP
Trigger: GGGGCAGACACTTTCTTTTCAGCAGCAAATATTCCC...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACCTAGAAATGACTTCATaGCAAATGTACATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: SPTSHCIVVRTALTLHVYLEMTS*QMYIFL
Trigger: GAGGAAAATGTACATTTGGCATGAAGTCATTTCTAG...GTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATTTATCATCCAGACCTTaGAATACAGTACAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHLSSRP*NTVQEA
Trigger: TGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAA...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGACCAAGAGATCAGCATaGTTTTACTCCTCCACTCTC +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPTKRSA*FYSSTL
Trigger: GAGAGTGGAGGAGTAAAAGCATGCTGATCTCTTGGT...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAACCAAGAGATCAGCATaGTTTTACTCCTCCACTCTC +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKTKRSA*FYSSTL
Trigger: GAGAGTGGAGGAGTAAAAGCATGCTGATCTCTTGGT...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTAGCTTTGGCAAGTGTTaGCACATTAAGCACACAGCA +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFSFGKC*HIKHTA
Trigger: TGCTGTGTGCTTAATGTGGCAACACTTGCCAAAGCT...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATAACACTTTGTTTATCTaGTCCTCCGAGGGCATCCAC +
Preference number: 2 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNNTLFI*SSEGIH
Trigger: GTGGATGCCCTCGGAGGAGCAGATAAACAAAGTGTT...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTTGTTCTCTAAGCAGATaGTCAGCTTTGAACATAGCA +
Preference number: 2 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPCSLSR*SALNIA
Trigger: TGCTATGTTCAAAGCTGAGCATCTGCTTAGAGAACA...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAGGGTTTGAGGTACAGTaGATCCTAATGAATTCTCGG +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKGFEVQ*ILMNSR
Trigger: CCGAGAATTCATTAGGATGCACTGTACCTCAAACCC...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGCGGAATTACATGCTTTaGACTCTAAGTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILRNYML*TLSDMG
Trigger: TCCCATGTCACTTAGAGTCCAAAGCATGTAATTCCG...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCCGAGGCATTGGAAAATaGTTTTCAATCTTTGGATGT +
Preference number: 2 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVRGIGK*FSIFGC
Trigger: ACATCCAAAGATTGAAAACCATTTTCCAATGCCTCG...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAGAGCCTTTAAAGAGGTaGAGGAGGAACTCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLREPLKR*RRNSGL
Trigger: GAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTC...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGCACTTTAAGAGTTTCTaGTCTCCCTCACAAGGTGTC +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPHFKSF*SPSQGV
Trigger: GACACCTTGTGAGGGAGACCAGAAACTCTTAAAGTG...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTGACCGTGAATCTCTaGACTGAACTAAAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEELTVNL*TELKKP
Trigger: AGGCTTCTTTAGTTCAGTCCAGAGATTCACGGTCAG...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAAACAGCCTGGTCATGCTaGAATTTTAGACTGATCCAC +
Preference number: 2 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEETAWSC*NFRLIH
Trigger: GTGGATCAGTCTAAAATTCCAGCATGACCAGGCTGT...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CAA 90 bp TCGTGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTaGTTACTTAAGCACCTGTGTATTTCCAAATCAGATTTAATGATA +
Preference number: 2 (lower is better)
Translates to: SCQPFDSSGGLGCTC*LLKHLCISKSDLMI
Trigger: TATCATTAAATCTGATTTGGAAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGCTTTGGACTCTAAGTaGCATGGGAATGGACATTCA +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGALDSK*HGNGHS
Trigger: TGAATGTCCATTCCCATGTCACTTAGAGTCCAAAGC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTCTGGGAACTCTGAAATaGAGTCTTAGGAAATCGAAG +
Preference number: 2 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCLGTLK*SLRKSK
Trigger: CTTCGATTTCCTAAGACTTCATTTCAGAGTTCCCAG...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAATGGGTCCACTGTAAATaGCAGCTCATTTACCCATTT +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKWVHCK*QLIYPF
Trigger: AAATGGGTAAATGAGCTGTCATTTACAGTGGACCCA...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACACCGCCTATGCAGAGATaGCAATTAGAAGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTPPMQR*QLEAAL
Trigger: CAATGCAGCTTCTAATTGTCATCTCTGCATAGGCGG...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTTGCTCCAGATGTAATTaGCAACAGCTCATCAGTAGT +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFCSRCN*QQLISS
Trigger: ACTACTGATGAGCTGTTGTCAATTACATCTGGAGCA...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCGAGCCAGCAGAAGGCTaGAACAATCCTAAGTGTTTG +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIEPAEG*NNPKCL
Trigger: CAAACACTTAGGATTGTTTCAGCCTTCTGCTGGCTC...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGGAGATGATACCGCACTaGGGAAATTATACACTTCAA +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILEMIPH*GNYTLQ
Trigger: TTGAAGTGTATAATTTCCTCAGTGCGGTATCATCTC...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAACAGTACTTATATGACTaGAAGGAGCCATCACTGTGT +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKQYLYD*KEPSLC
Trigger: ACACAGTGATGGCTCCTTTCAGTCATATAAGTACTG...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAACCCCTTTCACAATGTaGCACTGGTCCTGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTTPFTM*HWSCLS
Trigger: TGAAAGACAGGACCAGTGTCACATTGTGAAAGGGGT...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGTGCACAGCTGGATGGGGCGTTTTCATCCATGACAATGGGAAACAGAAGTTTTGACCTACAGCATCGCTaGACACTTTGTTTATCTGCT +
Preference number: 2 (lower is better)
Translates to: CAQLDGAFSSMTMGNRSFDLQHR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTC...AAAACTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCCTAGAAATGACTTCATaGCAAATGTACATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRLEMTS*QMYIFL
Trigger: GAGGAAAATGTACATTTGGCATGAAGTCATTTCTAG...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AGATGCCGTCGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGCTAGAAATGACTTCATaGCAAATGTACATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: RCRRSCPAFDLTQQPACGLEMTS*QMYIFL
Trigger: GAGGAAAATGTACATTTGGCATGAAGTCATTTCTAG...CCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: SQCSPQVQSVISISNNYSWRHPQ*LARNDF
Trigger: GAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCA...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAACAGAAACCACACACCTaGAGATTCCTAAGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKQKPHT*RFLSLG
Trigger: TCCTAAACTTAGGAATCTGCAGGTGTGTGGTTTCTG...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGAATGAGGGTCATGTTTaGGTTCTGGACATAATTCAC +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILNEGHV*VLDIIH
Trigger: GTGAATTATGTCCAGAACGCAAACATGACCCTCATT...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATTCAGGCCAAGCTTCGTaGCAGCCCTTTGACAGCTCT +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHSGQAS*QPFDSS
Trigger: AGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGA...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCAAGGCAGAAGTTTGTTaGTTTCTTTGCATATATTGC +
Preference number: 2 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVKAEVC*FLCIYC
Trigger: GCAATATATGCAAAGAAAGCAACAAACTTCTGCCTT...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCACCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGT +
Preference number: 2 (lower is better)
Translates to: IVKVIQALSQLKLMSAYAPRPTV*SLCTQG
Trigger: ACCCTGTGTACATAACGAGCAAACAGTGGGACGAGG...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACAGGAAGCAGCGCCTGCTGTTTTATGTaGCAGGGCAGTGTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: TALLIIIIQTLQYSTGSSACCFM*QGSVLV
Trigger: CACCAGAACACTGCCCTGGCACATAAAACAGCAGGC...GCTGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGCGGAATTACATGCTTTaGACTCTAAGTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPRNYML*TLSDMG
Trigger: TCCCATGTCACTTAGAGTCCAAAGCATGTAATTCCG...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTAAAGTGGATTCCTGTTTaGGAACTGTGGCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVKWIPV*ELWQWV
Trigger: GACCCACTGCCACAGTTCCCAAACAGGAATCCACTT...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGACATGGCCTCTGTTCTaGATTCTTCCCGTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVTWPLF*ILPVSV
Trigger: AACGCTGACGGGAAGAATCCAGAACAGAGGCCATGT...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAACATGGCCTCTGTTCTaGATTCTTCCCGTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRTWPLF*ILPVSV
Trigger: AACGCTGACGGGAAGAATCCAGAACAGAGGCCATGT...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCAACAACCCTTTCTCTTaGACAGCCAAAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: SQCSPQVQSVISISNNYSNNPFS*TAKDTG
Trigger: ACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAACTGCCAGAATGACGTaGAAAAGCAAACCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKTARMT*KSKPSQ
Trigger: TTGACTTGGTTTGCTTTTCCACGTCATTCTGGCAGT...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACTCAACACCCACAAATaGGCTGATGAGAAATGGGGC +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVLNTHK*ADEKWG
Trigger: GCCCCATTTCTCATCAGCCCATTTGTGGGTGTTGAG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTTCAAGAATCATTACTaGACTGAGAGAAAACCACAA +
Preference number: 2 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKFKNHY*TERKPQ
Trigger: TTGTGGTTTTCTCTCAGTCCAGTAATGATTCTTGAA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGATGTGGGGAATGCAAGTaGCCTCTAATTCGATGGCGT +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGCGECK*PLIRWR
Trigger: ACGCCATCGAATTAGAGGCCACTTGCATTCCCCACA...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGTGTGGGGAATGCAAGTaGCCTCTAATTCGATGGCGT +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVCGECK*PLIRWR
Trigger: ACGCCATCGAATTAGAGGCCACTTGCATTCCCCACA...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATCTGGGAACTCTGAAATaGAGTCTTAGGAAATCGAAG +
Preference number: 2 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNLGTLK*SLRKSK
Trigger: CTTCGATTTCCTAAGACTTCATTTCAGAGTTCCCAG...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGACTGGGAACTCTGAAATaGAGTCTTAGGAAATCGAAG +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGLGTLK*SLRKSK
Trigger: CTTCGATTTCCTAAGACTTCATTTCAGAGTTCCCAG...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACCGCCTATGCAGAGATaGCAATTAGAAGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVPPMQR*QLEAAL
Trigger: CAATGCAGCTTCTAATTGTCATCTCTGCATAGGCGG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACCCGCCTATGCAGAGATaGCAATTAGAAGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNPPMQR*QLEAAL
Trigger: CAATGCAGCTTCTAATTGTCATCTCTGCATAGGCGG...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGGGTGGTAAACTAAGCTaGAGAAAACAGCAATCACAT +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPGGKLS*RKQQSH
Trigger: ATGTGATTGCTGTTTTCTTCAGCTTAGTTTACCACC...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTCAGCATTGTAGTCCTTAGTTTCCACATATGCACAACAGCTAGGTTCCCGACAGGCACAGCTGCATCCTaGGATATTTTTAACTCAAGT +
Preference number: 2 (lower is better)
Translates to: VSIVVLSFHICTTARFPTGTAAS*DIFNSS
Trigger: ACTTGAGTTAAAAATATCTCAGGATGCAGCTGTGCC...TGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGGAGGTTAAACACTTGTaGGAAGCAGGCATTTTAATT +
Preference number: 2 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILEVKHL*EAGILI
Trigger: AATTAAAATGCCTGCTTCTCACAAGTGTTTAACCTC...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTGAATCATTACTGGACTaGGAGAAAACCACAATCCAA +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFESLLD*EKTTIQ
Trigger: TTGGATTGTGGTTTTCTCTCAGTCCAGTAATGATTC...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACACTACAAACCCACATGTaGAAGCTGTCACAGACTAAC +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTLQTHM*KLSQTN
Trigger: GTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAG...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGATTTGGAGAGAGTCAGTaGACACTCTCAAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRFGESQ*TLSKRQ
Trigger: CTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAA...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCTGT +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVFPKAA*VLKLIC
Trigger: ACAGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTACCACAATCCAATTGTaGCAGTGCCGACCACCTGAT +
Preference number: 2 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCTTIQL*QCRPPD
Trigger: ATCAGGTGGTCGGCACTGGCACAATTGGATTGTGGT...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGAATGAGGGTCATGTTTaGGTTCTGGACATAATTCAC +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPNEGHV*VLDIIH
Trigger: GTGAATTATGTCCAGAACGCAAACATGACCCTCATT...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGACTCACACGGTATGTaGAAACCCACTTTCCATTAC +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTDSHGM*KPTFHY
Trigger: GTAATGGAAAGTGGGTTTGCACATACCGTGTGAGTC...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGACACACACTGCTGTTaGGACACATTTGCATTAGAG +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTDTHCC*DTFALE
Trigger: CTCTAATGCAAATGTGTCGCAACAGCAGTGTGTGTC...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGGTTTGAGGTACAGTaGATCCTAATGAATTCTGTG +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGGFEVQ*ILMNSV
Trigger: CACAGAATTCATTAGGATGCACTGTACCTCAAACCC...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR GCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCACCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: IVKVIQALSQLKLMSAYAPVSPD*TDLFLF
Trigger: GAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGG...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGACGGAATTACATGCTTTaGACTCTAAGTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGRNYML*TLSDMG
Trigger: TCCCATGTCACTTAGAGTCCAAAGCATGTAATTCCG...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAA +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNASLKI*DWRHPQ
Trigger: TTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAAACAACCCTTTCTCTTaGACAGCCAAAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRNNPFS*TAKDTG
Trigger: ACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTACATTAATGCTATCCTaGATGTTATCCGGAGACAGT +
Preference number: 2 (lower is better)
Translates to: TALEAWAVHACYLSTCVFTLMLS*MLSGDS
Trigger: ACTGTCTCCGGATAACATCCAGGATAGCATTAATGT...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATCACCCCAGCCTTAAATaGATGCCCACACAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNHPSLK*MPTQGK
Trigger: CTTTCCCTGTGTGGGCATCCATTTAAGGCTGGGGTG...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GTCAGCATTGTAGTCCTTAGTTTCCACATATGCACAACAGCTAGGTTCCCGACAACTGCCAGAATGACGTaGAAAAGCAAACCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: VSIVVLSFHICTTARFPTTARMT*KSKPSQ
Trigger: TTGACTTGGTTTGCTTTTCCACGTCATTCTGGCAGT...TGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp GATCTAATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTaGCACAGGGAATCTAGAAAAGCGGAGGGAACTAGACTTCTGATA +
Preference number: 2 (lower is better)
Translates to: DLITRSKVVLYVPAS*HRESRKAEGTRLLI
Trigger: TATCAGAAGTCTAGTTCCCTCCGCTTTTCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGTACATTTTCCTCTGTaGTATAACACACCCCAAATC +
Preference number: 2 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGVHFPL*YNTPQI
Trigger: GATTTGGGGTGTGTTATATCACAGAGGAAAATGTAC...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGATGGGTCCACTGTAAATaGCAGCTCATTTACCCATTT +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRWVHCK*QLIYPF
Trigger: AAATGGGTAAATGAGCTGTCATTTACAGTGGACCCA...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGCTTTCAACATCATATTaGACGAATGCTCCAGATGTA +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPLSTSY*TNAPDV
Trigger: TACATCTGGAGCATTCGTTCAATATGATGTTGAAAG...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGGTGGTAAACTAAGCTaGAGAAAACAGCAATCACAT +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGGGKLS*RKQQSH
Trigger: ATGTGATTGCTGTTTTCTTCAGCTTAGTTTACCACC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCCAAACCAAGTCAATTTaGCAACATCTTCAGACCTCT +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGQTKSI*QHLQTS
Trigger: AGAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTG...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGGTAATTCTAAAAGTTaGCAGAGGACTAGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGGNSKS*QRTRFC
Trigger: GCAAAACCTAGTCCTCTGTCAACTTTTAGAATTACC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGGAGGTTAAACACTTGTaGGAAGCAGGCATTTTAATT +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPEVKHL*EAGILI
Trigger: AATTAAAATGCCTGCTTCTCACAAGTGTTTAACCTC...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGAATCATTACTGGACTaGGAGAAAACCACAATCCAA +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGESLLD*EKTTIQ
Trigger: TTGGATTGTGGTTTTCTCTCAGTCCAGTAATGATTC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGACAAGAAATCATGGATTaGGAGTGGTTGGAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGQEIMD*EWLESR
Trigger: TCTGGACTCCAACCACTCTCAATCCATGATTTCTTG...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTACCCCTTTCACAATGTaGCACTGGTCCTGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCTPFTM*HWSCLS
Trigger: TGAAAGACAGGACCAGTGTCACATTGTGAAAGGGGT...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCTGT +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPFPKAA*VLKLIC
Trigger: ACAGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCTTATCATCCAGACCTTaGAATACAGTACAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGLSSRP*NTVQEA
Trigger: TGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAA...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAAACAATGTGTCTGACTaGCAGAATGACGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRNNVSD*QNDVEK
Trigger: CTTTTCCACGTCATTCTGGCAGTCAGACACATTGTT...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCAACAATGTGTCTGACTaGCAGAATGACGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGINNVSD*QNDVEK
Trigger: CTTTTCCACGTCATTCTGGCAGTCAGACACATTGTT...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGACAGAAACCACACACCTaGAGATTCCTAAGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRQKPHT*RFLSLG
Trigger: TCCTAAACTTAGGAATCTGCAGGTGTGTGGTTTCTG...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAACAGATGTACTTTTGTTaGAATTTGGGGAATGGTGAT +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKQMYFC*NLGNGD
Trigger: ATCACCATTCCCCAAATTGCAACAAAAGTACATCTG...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGGCCTGGGCTGTACATaGTTGTTACTTAAGCACCTG +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNGLGCT*LLLKHL
Trigger: CAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGATGTCCTTTATGTCCCTaGATCTTTGCACAGGGAATC +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRCPLCP*IFAQGI
Trigger: GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACA...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACAGGAAGCAGCTGGGAACTGTGGCAGTaGGTCAAGAGTTTTAAGTCC +
Preference number: 2 (lower is better)
Translates to: TALLIIIIQTLQYSTGSSWELWQ*VKSFKS
Trigger: GGACTTAAAACTCTTGACCCACTGCCACAGTTCCCA...GCTGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTAGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAA +
Preference number: 2 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVASLKI*DWRHPQ
Trigger: TTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGC...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGCGAGGCATTGGAAAATaGTTTTCAATCTTTGGATGT +
Preference number: 2 (lower is better)
Translates to: IIENRVKATGPRVSCYMPRGIGK*FSIFGC
Trigger: ACATCCAAAGATTGAAAACCATTTTCCAATGCCTCG...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTAAACAACCCTTTCTCTTaGACAGCCAAAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVNNPFS*TAKDTG
Trigger: ACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCACATTAATGCTATCCTaGATGTTATCCGGAGACAGT +
Preference number: 2 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGTLMLS*MLSGDS
Trigger: ACTGTCTCCGGATAACATCCAGGATAGCATTAATGT...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTAGAGCCTTTAAAGAGGTaGAGGAGGAACTCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVEPLKR*RRNSGL
Trigger: GAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTC...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAACTGCCAGAATGACGTaGAAAAGCAAACCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: TRSKVVLYVPASLHRESRTARMT*KSKPSQ
Trigger: TTGACTTGGTTTGCTTTTCCACGTCATTCTGGCAGT...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATCTCAACACCCACAAATaGGCTGATGAGAAATGGGGC +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHLNTHK*ADEKWG
Trigger: GCCCCATTTCTCATCAGCCCATTTGTGGGTGTTGAG...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGGCACAAGTCATTAAATaGCAGGGATACGCAGAAACC +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVAQVIK*QGYAET
Trigger: GGTTTCTGCGTATCCCTGCCATTTAATGACTTGTGC...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATAAAACAGCTGGTTTTTaGACAGATGATACGAAGGCA +
Preference number: 2 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNKTAGF*TDDTKA
Trigger: TGCCTTCGTATCATCTGTCCAAAAACCAGCTGTTTT...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR TCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTAGGTGTACCCACAAATaGTTTAGATACCCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPRCTHK*FRYPLP
Trigger: AGGAAGGGGGTATCTAAATCATTTGTGGGTACACCT...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCATGCTCCAGATGTAATTaGCAACAGCTCATCAGTAGT +
Preference number: 2 (lower is better)
Translates to: IVKVIQALSQLKLMSAYACSRCN*QQLISS
Trigger: ACTACTGATGAGCTGTTGTCAATTACATCTGGAGCA...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATCTTTCAACATCATATTaGACGAATGCTCCAGATGTA +
Preference number: 2 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNLSTSY*TNAPDV
Trigger: TACATCTGGAGCATTCGTTCAATATGATGTTGAAAG...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATGAGCCAGCAGAAGGCTaGAACAATCCTAAGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHEPAEG*NNPKCL
Trigger: CAAACACTTAGGATTGTTTCAGCCTTCTGCTGGCTC...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGAATCATTACTGGACTaGGAGAAAACCACAATCCAA +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTESLLD*EKTTIQ
Trigger: TTGGATTGTGGTTTTCTCTCAGTCCAGTAATGATTC...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTATCCAGTACTTATATaGCTGAAAGGAGCCATCACT +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIYPVLI*LKGAIT
Trigger: AGTGATGGCTCCTTTCAGTCATATAAGTACTGGATA...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACATTGCCATCAGTTAAGTaGCATTTCCCTCCAATGTTT +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTLPSVK*HFPPMF
Trigger: AAACATTGGAGGGAAATGTCACTTAACTGATGGCAA...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCCAATTTGGGGAATGGTaGTTCAACAAGAAGAACACA +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIQFGEW*FNKKNT
Trigger: TGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTG...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAAATGTTGTCAGAGGTCTaGCTCTGGACCCCTTTCACA +
Preference number: 2 (lower is better)
Translates to: NIESKGCVIILTKLASPKMLSEV*LWTPFT
Trigger: TGTGAAAGGGGTCCAGAGTCAGACCTCTGACAACAT...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAAACAATGTGTCTGACTaGCAGAATGACGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRNNVSD*QNDVEK
Trigger: CTTTTCCACGTCATTCTGGCAGTCAGACACATTGTT...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTACCAAGAGATCAGCATaGTTTTACTCCTCCACTCTC +
Preference number: 2 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCTKRSA*FYSSTL
Trigger: GAGAGTGGAGGAGTAAAAGCATGCTGATCTCTTGGT...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGACAGAAACCACACACCTaGAGATTCCTAAGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRQKPHT*RFLSLG
Trigger: TCCTAAACTTAGGAATCTGCAGGTGTGTGGTTTCTG...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTAGCTTTGGCAAGTGTTaGCACATTAAGCACACAGCA +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPSFGKC*HIKHTA
Trigger: TGCTGTGTGCTTAATGTGGCAACACTTGCCAAAGCT...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGACTGTTGCGACACATTTaGATTAGAGCTGTGACTCAA +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRLLRHI*IRAVTQ
Trigger: TTGAGTCACAGCTCTAATGCAAATGTGTCGCAACAG...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGCTGTTGCGACACATTTaGATTAGAGCTGTGACTCAA +
Preference number: 2 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVLLRHI*IRAVTQ
Trigger: TTGAGTCACAGCTCTAATGCAAATGTGTCGCAACAG...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGACTGTTGCGACACATTTaGATTAGAGCTGTGACTCAA +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGLLRHI*IRAVTQ
Trigger: TTGAGTCACAGCTCTAATGCAAATGTGTCGCAACAG...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTGACACACACTGCTGTTaGGACACATTTGCATTAGAG +
Preference number: 2 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCDTHCC*DTFALE
Trigger: CTCTAATGCAAATGTGTCGCAACAGCAGTGTGTGTC...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACATAATGACACACACTaGTGTTGCGACACATTTGCA +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVHNDTH*CCDTFA
Trigger: TGCAAATGTGTCGCAACAGCAGTGTGTGTCATTATG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTAATGTCCCTGCATCTTTaGACAGGGAATCTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVMSLHL*TGNLEK
Trigger: CTTTTCTAGATTCCCTGTGCAAAGATGCAGGGACAT...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTGTCCTTTATGTCCCTaGATCTTTGCACAGGGAATC +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPCPLCP*IFAQGI
Trigger: GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTCACCTGGCCTTGGCATaGTTTCAAAGGATGTTAAGT +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPHLALA*FQRMLS
Trigger: ACTTAACATCCTTTGAAAGCATGCCAAGGCCAGGTG...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAAAGGCAGAAGTTTGTTaGTTTCTTTGCATATATTGC +
Preference number: 2 (lower is better)
Translates to: TAHSRAIILLARSVPEVKKAEVC*FLCIYC
Trigger: GCAATATATGCAAAGAAAGCAACAAACTTCTGCCTT...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAACCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGT +
Preference number: 2 (lower is better)
Translates to: NIESKGCVIILTKLASPKPRPTV*SLCTQG
Trigger: ACCCTGTGTACATAACGAGCAAACAGTGGGACGAGG...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGACGGAATTACATGCTTTaGACTCTAAGTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRRNYML*TLSDMG
Trigger: TCCCATGTCACTTAGAGTCCAAAGCATGTAATTCCG...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGTGCACAGCTGGATGGGGCGTTTTCATCCATGACAATGGGAAACAGAAGTTTTCGAGGCATTGGAAAATaGTTTTCAATCTTTGGATGT +
Preference number: 2 (lower is better)
Translates to: CAQLDGAFSSMTMGNRSFRGIGK*FSIFGC
Trigger: ACATCCAAAGATTGAAAACCATTTTCCAATGCCTCG...AAAACTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCAAAGTTGCAAACTCGTaGAAGAGAAAACTCGATGGA +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIKVANS*KRKLDG
Trigger: TCCATCGAGTTTTCTCTTCCACGAGTTTGCAACTTT...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGAGTACATTTTCCTCTGTaGTATAACACACCCCAAATC +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGVHFPL*YNTPQI
Trigger: GATTTGGGGTGTGTTATATCACAGAGGAAAATGTAC...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACCTTGTCCAAGCTTACTaGCTAAATAAACCACCAAAG +
Preference number: 2 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNLVQAY*LNKPPK
Trigger: CTTTGGTGGTTTATTTAGTCAGTAAGCTTGGACAAG...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACTTGTCCAAGCTTACTaGCTAAATAAACCACCAAAG +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVLVQAY*LNKPPK
Trigger: CTTTGGTGGTTTATTTAGTCAGTAAGCTTGGACAAG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATAGGTGTACCCACAAATaGTTTAGATACCCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNRCTHK*FRYPLP
Trigger: AGGAAGGGGGTATCTAAATCATTTGTGGGTACACCT...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTGCTCCAGATGTAATTaGCAACAGCTCATCAGTAGT +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPCSRCN*QQLISS
Trigger: ACTACTGATGAGCTGTTGTCAATTACATCTGGAGCA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACAAACCAAGTCAATTTaGCAACATCTTCAGACCTCT +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVQTKSI*QHLQTS
Trigger: AGAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGAGGTAATTCTAAAAGTTaGCAGAGGACTAGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGGNSKS*QRTRFC
Trigger: GCAAAACCTAGTCCTCTGTCAACTTTTAGAATTACC...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACAGGAAGCAGCGGCACAGCTGCATCCTaGGATATTTTTAACTCAAGT +
Preference number: 2 (lower is better)
Translates to: TALLIIIIQTLQYSTGSSGTAAS*DIFNSS
Trigger: ACTTGAGTTAAAAATATCTCAGGATGCAGCTGTGCC...GCTGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACAATTTGGGGAATGGTaGTTCAACAAGAAGAACACA +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVQFGEW*FNKKNT
Trigger: TGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGACAATTTGGGGAATGGTaGTTCAACAAGAAGAACACA +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRQFGEW*FNKKNT
Trigger: TGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTG...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACCACCAATCAGGGTTTaGGGTACAGTGCATCCTAAT +
Preference number: 2 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVPPIRV*GTVHPN
Trigger: ATTAGGATGCACTGTACCTCAAACCCTGATTGGTGG...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCCTAGAAATGACTTCATaGCAAATGTACATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: SQCSPQVQSVISISNNYSLEMTS*QMYIFL
Trigger: GAGGAAAATGTACATTTGGCATGAAGTCATTTCTAG...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMWRHPQ*LARNDF
Trigger: GAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCA...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCATTATCATCCAGACCTTaGAATACAGTACAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: IVKVIQALSQLKLMSAYALSSRP*NTVQEA
Trigger: TGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAA...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGACTCACACGGTATGTaGAAACCCACTTTCCATTAC +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNDSHGM*KPTFHY
Trigger: GTAATGGAAAGTGGGTTTGCACATACCGTGTGAGTC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCCAGATGTACTTTTGTTaGAATTTGGGGAATGGTGAT +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIQMYFC*NLGNGD
Trigger: ATCACCATTCCCCAAATTGCAACAAAAGTACATCTG...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTCGGAATTACATGCTTTaGACTCTAAGTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPRNYML*TLSDMG
Trigger: TCCCATGTCACTTAGAGTCCAAAGCATGTAATTCCG...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTGCCCATTTAGCTTTTaGTTCCACAAAGAACATAGT +
Preference number: 2 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGICPFSF*FHKEHS
Trigger: ACTATGTTCTTTGTGGAACCAAAAGCTAAATGGGCA...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATAACAACCCTTTCTCTTaGACAGCCAAAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNNNPFS*TAKDTG
Trigger: ACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAACATTAATGCTATCCTaGATGTTATCCGGAGACAGT +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRTLMLS*MLSGDS
Trigger: ACTGTCTCCGGATAACATCCAGGATAGCATTAATGT...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGATGGGCTGATGAGAAATaGGGCCTTATCAAATGTAAA +
Preference number: 2 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGWADEK*GLIKCK
Trigger: TTTACATTTGATAAGGCCCCATTTCTCATCAGCCCA...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGGCACAGCTGCATCCTaGGATATTTTTAACTCAAGT +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNGTAAS*DIFNSS
Trigger: ACTTGAGTTAAAAATATCTCAGGATGCAGCTGTGCC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGTACAGAGACAAGCCTTaGAATCGGCAATGTGGTATA +
Preference number: 2 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMYRDKP*NRQCGI
Trigger: TATACCACATTGCCGATTGCAAGGCTTGTCTCTGTA...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACGAGGCATTGGAAAATaGTTTTCAATCTTTGGATGT +
Preference number: 2 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVRGIGK*FSIFGC
Trigger: ACATCCAAAGATTGAAAACCATTTTCCAATGCCTCG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGATGCCCATTTAGCTTTTaGTTCCACAAAGAACATAGT +
Preference number: 2 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRCPFSF*FHKEHS
Trigger: ACTATGTTCTTTGTGGAACCAAAAGCTAAATGGGCA...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACTGCCCATTTAGCTTTTaGTTCCACAAAGAACATAGT +
Preference number: 2 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNCPFSF*FHKEHS
Trigger: ACTATGTTCTTTGTGGAACCAAAAGCTAAATGGGCA...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATACTGCCAGAATGACGTaGAAAAGCAAACCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHTARMT*KSKPSQ
Trigger: TTGACTTGGTTTGCTTTTCCACGTCATTCTGGCAGT...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAACTTTTGTTGCAATTTaGGGAATGGTGATTCAACAA +
Preference number: 2 (lower is better)
Translates to: GANPTGHCSLYTISIVLTTFVAI*GMVIQQ
Trigger: TTGTTGAATCACCATTCCCCAAATTGCAACAAAAGT...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATAAATGTGGCCTTCTCTaGCAGCAAAGAAAATCCGAA +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHKCGLL*QQRKSE
Trigger: TTCGGATTTTCTTTGCTGCCAGAGAAGGCCACATTT...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR TCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGGTGGTAAACTAAGCTaGAGAAAACAGCAATCACAT +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNGGKLS*RKQQSH
Trigger: ATGTGATTGCTGTTTTCTTCAGCTTAGTTTACCACC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGGTAATTCTAAAAGTTaGCAGAGGACTAGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNGNSKS*QRTRFC
Trigger: GCAAAACCTAGTCCTCTGTCAACTTTTAGAATTACC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGAGATGATACCGCACTaGGGAAATTATACACTTCAA +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNEMIPH*GNYTLQ
Trigger: TTGAAGTGTATAATTTCCTCAGTGCGGTATCATCTC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATTATCCAGTACTTATATaGCTGAAAGGAGCCATCACT +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHYPVLI*LKGAIT
Trigger: AGTGATGGCTCCTTTCAGTCATATAAGTACTGGATA...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGTCTTCATTTTCTTGTTaGAACGAGATAACCTCCTGC +
Preference number: 2 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMSSFSC*NEITSC
Trigger: GCAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGA...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTGCCCATTTAGCTTTTaGTTCCACAAAGAACATAGT +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPCPFSF*FHKEHS
Trigger: ACTATGTTCTTTGTGGAACCAAAAGCTAAATGGGCA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATAAAGTTGCAAACTCGTaGAAGAGAAAACTCGATGGA +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNKVANS*KRKLDG
Trigger: TCCATCGAGTTTTCTCTTCCACGAGTTTGCAACTTT...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTAACTGCCAGAATGACGTaGAAAAGCAAACCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVTARMT*KSKPSQ
Trigger: TTGACTTGGTTTGCTTTTCCACGTCATTCTGGCAGT...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAACTTGTCCAAGCTTACTaGCTAAATAAACCACCAAAG +
Preference number: 2 (lower is better)
Translates to: NIESKGCVIILTKLASPKLVQAY*LNKPPK
Trigger: CTTTGGTGGTTTATTTAGTCAGTAAGCTTGGACAAG...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAATCTTCATTTTCTTGTTaGAACGAGATAACCTCCTGC +
Preference number: 2 (lower is better)
Translates to: NIESKGCVIILTKLASPKSSFSC*NEITSC
Trigger: GCAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGA...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATCGAGGCATTGGAAAATaGTTTTCAATCTTTGGATGT +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHRGIGK*FSIFGC
Trigger: ACATCCAAAGATTGAAAACCATTTTCCAATGCCTCG...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAAACATTAATGCTATCCTaGATGTTATCCGGAGACAGT +
Preference number: 2 (lower is better)
Translates to: NIESKGCVIILTKLASPKTLMLS*MLSGDS
Trigger: ACTGTCTCCGGATAACATCCAGGATAGCATTAATGT...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTTCAAGAATCATTACTaGACTGAGAGAAAACCACAA +
Preference number: 2 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPFKNHY*TERKPQ
Trigger: TTGTGGTTTTCTCTCAGTCCAGTAATGATTCTTGAA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAACTTTCAACATCATATTaGACGAATGCTCCAGATGTA +
Preference number: 2 (lower is better)
Translates to: NIESKGCVIILTKLASPKLSTSY*TNAPDV
Trigger: TACATCTGGAGCATTCGTTCAATATGATGTTGAAAG...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR TCA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACTTTCAACATCATATTaGACGAATGCTCCAGATGTA +
Preference number: 2 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVLSTSY*TNAPDV
Trigger: TACATCTGGAGCATTCGTTCAATATGATGTTGAAAG...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR GCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATCTAGAAATGACTTCATaGCAAATGTACATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNLEMTS*QMYIFL
Trigger: GAGGAAAATGTACATTTGGCATGAAGTCATTTCTAG...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATTTCAAGAATCATTACTaGACTGAGAGAAAACCACAA +
Preference number: 2 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHFKNHY*TERKPQ
Trigger: TTGTGGTTTTCTCTCAGTCCAGTAATGATTCTTGAA...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 90 bp ATTTTGGAGAGAGTCAGTGAACACTCTCAAAAAGGCAGAAGTTTGTaGCTTTCTTTGCATATATTGCATTTCTATGTCTATGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: ILERVSEHSQKGRSL*LSLHILHFYVYVVR
Trigger: TCTGACAACATAGACATAGAAATGCAATATATGCAAAGAAAGCAACAAACTTCTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR GCA 72 bp AGCTGCTTGCTTCCCTCGGTGGGCTGCTCGGCGGGCTaGGGCAGGAGCTGGTTGTGGTGCAGCAGCACTGTC +
Preference number: 3 (lower is better)
Translates to: SCLLPSVGCSAG*GRSWLWCSSTV
Trigger: GACAGTGCTGCTGCACCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAGCAAGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR GCA 72 bp GCAGGGGTAGGCTGGACAGTGACTGAGTTCCCCGCCTaGCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGC +
Preference number: 3 (lower is better)
Translates to: AGVGWTVTEFPA*LQQALLPRGTG
Trigger: GCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGGCAGGCGGGGAACTCAGTCACTGTCCAGCCTACCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCGGCACCTCTGGCCACTaGTCCTGGTGCCACTGTACA +
Preference number: 3 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGGTSGH*SWCHCT
Trigger: TGTACAGTGGCACCAGGACAAGTGGCCAGAGGTGCC...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCAGGGCCATCATTCTCTaGGCAAGATCTGTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGRAIIL*ARSVPE
Trigger: CTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCT...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp TCAGATGTTGCCGGAGAGGTCCAGCCACCTAAGGTGTaGACCGGGGAGGCTGAGAGAGGGTCCACATCAGCC +
Preference number: 3 (lower is better)
Translates to: SDVAGEVQPPKV*TGEAERGSTSA
Trigger: GGCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCACACCTTAGGTGGCTGGACCTCTCCGGCAACATCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR GCA 72 bp CTGTGGAGGGCCTGCTGCTGTGCCTGCTGTTTTATGTaGCAGGGCAGTGTTCTGGTGGCCTTGTCGCGGTCC +
Preference number: 3 (lower is better)
Translates to: LWRACCCACCFM*QGSVLVALSRS
Trigger: GGACCGCGACAAGGCCACCAGAACACTGCCCTGGCACATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCAAAGTGGATTCCTGTTaGGGAACTGTGGCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGKVDSC*GTVAVG
Trigger: ACCCACTGCCACAGTTCCCAAACAGGAATCCACTTT...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp GTCTCCCTCACAAGGTGTCAGTCAGGCCAAGCTTCGTaGCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: VSLTRCQSGQAS*QPFDSSGGLGC
Trigger: ACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGACTGACACCTTGTGAGGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCGTACAGAGACAAGCCTaGCAATCGGCAATGTGGTAT +
Preference number: 3 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGVQRQA*QSAMWY
Trigger: ATACCACATTGCCGATTGCAAGGCTTGTCTCTGTAC...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 72 bp GGGGCTGCGAAACCAGCCACACAGAGATGGGAACCCTaGCCAATCGCCAAGGCTGTCACCAGGTGTCACGTA +
Preference number: 3 (lower is better)
Translates to: GAAKPATQRWEP*PIAKAVTRCHV
Trigger: TACGTGACACCTGGTGACAGCCTTGGCGATTGGTCAGGGTTCCCATCTCTGTGTGGCTGGTTTCGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp TCGTTATGTACACAGGGTAGTTGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCTCGGCGGGCTGCGGCA +
Preference number: 3 (lower is better)
Translates to: SLCTQGSCSTAA*FPRWAARRAAA
Trigger: TGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAACTACCCTGTGTACATAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR GCA 72 bp ACTGGTCCTGAACTGTGGAGGGCCTGCTGCTGTGCCTaGTGTTTTATGTGCCAGGGCAGTGTTCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: TGPELWRACCCA*CFMCQGSVLVA
Trigger: GGCCACCAGAACACTGCCCTGGCACATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAGTTCAGGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CCA 72 bp ACCGGGGAGGCTGAGAGAGGGTCCACATCAGCCAGGTaGCCATACTCACTGGCTGATGAGGTGTTTGGAGTC +
Preference number: 3 (lower is better)
Translates to: TGEAERGSTSAR*PYSLADEVFGV
Trigger: GACTCCAAACACCTCATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGACCCTCTCTCAGCCTCCCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCTTGCTTCCCTCGGTGGGCTGCTCGGCGGGCTGCGGCAGGAGCTGGTTGTGGTCTCTTCATTTTCTTGTaGCAACGAGATAACCTCCTG +
Preference number: 3 (lower is better)
Translates to: ACFPRWAARRAAAGAGCGLFIFL*QRDNLL
Trigger: CAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGAG...ACCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCCTAGCAGATGTACTTTaGTTGCAATTTGGGGAATGG +
Preference number: 3 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGLADVL*LQFGEW
Trigger: CCATTCCCCAAATTGCAACAAAAGTACATCTGCTAG...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp TGCAGGAAAGTCCCCACGGCCCGCCCCTGTCGGGCATaGCCTACAGCATCGCTGAACACTTTGTTTATCTGC +
Preference number: 3 (lower is better)
Translates to: CRKVPTARPCRA*PTASLNTLFIC
Trigger: GCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTCATGCCCGACAGGGGCGGGCCGTGGGGACTTTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR TCA 72 bp CCGTGGCAGTGGCTACCCCAGACCTGTCCGCTTGCATaGGAGTCATCTAGGATGGTTGAGAGTCACGCATGC +
Preference number: 3 (lower is better)
Translates to: PWQWLPQTCPLA*ESSRMVESHAC
Trigger: GCATGCGTGACTCTCAACCATCCTAGATGACTCTCATGCAAGCGGACAGGTCTGGGGTAGCCACTGCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTGCCTCGTCCCACTGTTaGCTCGTTATGTACACAGGG +
Preference number: 3 (lower is better)
Translates to: VQEAAGALCTSEASGKNPASSHC*LVMYTG
Trigger: CCCTGTGTACATAACGAGCAAACAGTGGGACGAGGC...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 72 bp AAGGTGTCAGTCAGGCCAAGCTTCGTGCCAGCCCTTTaGCAGCTCTGGAGGCCTGGGCTGTACATGCTTGTT +
Preference number: 3 (lower is better)
Translates to: KVSVRPSFVPAL*QLWRPGLYMLV
Trigger: AACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGACTGACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CTAAAGAAGCCTAGCTGCTCCCCGACAGAACACGTGTaGTCTTCAGGCAGCAGGGCGTTCAGAGTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: LKKPSCSPTEHV*SSGSRAFRVQG
Trigger: TCCCTGAACTCTGAACGCCCTGCTGCCTGAAGAGCACACGTGTTCTGTCGGGGAGCAGCTAGGCTTCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CCA 72 bp CAGCTCTGCTCAGGGGGCCAGGCTTCCCTGAAGATCTaGGACTGGAGACACCCTCAATGCCTAGCTAGAAAT +
Preference number: 3 (lower is better)
Translates to: QLCSGGQASLKI*DWRHPQCLARN
Trigger: ATTTCTAGCTAGGCATTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGCCTGGCCCCCTGAGCAGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp GCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATaGCCTCGGTGCAGATCACTGAAGGGTAAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: AVTCLLVILTKA*PRCRSLKGKGQ
Trigger: CTGCCCCTTACCCTTCAGTGATCTGCACCGAGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp TGTCTCCTTGTCATCCTGACGAAGGCATGGCCTCGGTaGAGATCACTGAAGGGTAAGGGGCAGTCTACAGGA +
Preference number: 3 (lower is better)
Translates to: CLLVILTKAWPR*RSLKGKGQSTG
Trigger: TCCTGTAGACTGCCCCTTACCCTTCAGTGATCTGCACCGAGGCCATGCCTTCGTCAGGATGACAAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CTGGTCAATAGAACTGGTCCTGAACTGTGGAGGGCCTaGTGCTGTGCCTGCTGTTTTATGTGCCAGGGCAGT +
Preference number: 3 (lower is better)
Translates to: LVNRTGPELWRA*CCACCFMCQGS
Trigger: ACTGCCCTGGCACATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAGTTCAGGACCAGTTCTATTGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CCA 72 bp GTGCCTGCTGTTTTATGTGCCAGGGCAGTGTTCTGGTaGCCTTGTCGCGGTCCTACGTGTCTGTGTTTATCC +
Preference number: 3 (lower is better)
Translates to: VPAVLCARAVFW*PCRGPTCLCLS
Trigger: GGATAAACACAGACACGTAGGACCGCGACAAGGCCACCAGAACACTGCCCTGGCACATAAAACAGCAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp TTTATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTGAGGTACAGTGCATCTTGTTCAACAGCTGCTaGCTTCCCTCGGTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: FICSSEGIHQSGFEVQCILFNSC*LPSVGC
Trigger: GCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAA...GATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 72 bp GATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCTaGACCCACCACCCCGGCACTGTGTCAACGAAGTAT +
Preference number: 3 (lower is better)
Translates to: DLTQQPACGSSR*THHPGTVSTKY
Trigger: ATACTTCGTTGACACAGTGCCGGGGTGGTGGGTTCAGCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp CAGGGAGTTCTGCCAGAAGCGGCACCTTTTGCAGGCTaGCTTAATAGTCAGGGGACCACACAGGAAACCACT +
Preference number: 3 (lower is better)
Translates to: QGVLPEAAPFAG*LNSQGTTQETT
Trigger: AGTGGTTTCCTGTGTGGTCCCCTGACTATTAAGTCAGCCTGCAAAAGGTGCCGCTTCTGGCAGAACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CCTTGCAATACAGTACAGGAAGCAGCGGGTGCCCTCTaGACATCTGAAGCAAGTGGCAAGAACCCTTGGTGT +
Preference number: 3 (lower is better)
Translates to: PCNTVQEAAGAL*TSEASGKNPWC
Trigger: ACACCAAGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTACTGTATTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp ACGCGCTTCCCTCACCACCTGACCAAGAGATCAGCATaGTTTTACTCCTCCACTCTCTACCATAGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: TRFPHHLTKRSA*FYSSTLYHREA
Trigger: GGCTTCCCTATGGTAGAGAGTGGAGGAGTAAAAGCATGCTGATCTCTTGGTCAGGTGGTGAGGGAAGCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp ACTACGCTTGACTGGGGCAAACAGAAGCGGCCATTCTaGTTACGGAGCTCAAAGGAAGCTCAGGTGAGTAGC +
Preference number: 3 (lower is better)
Translates to: TTLDWGKQKRPF*LRSSKEAQVSS
Trigger: GCTACTCACCTGAGCTTCCTTTGAGCTCCGTAAGCAGAATGGCCGCTTCTGTTTGCCCCAGTCAAGCGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCATaGTTTCAAAGGATGTTAAGTCTTGAACTACAGGGG +
Preference number: 3 (lower is better)
Translates to: PRGTGQAHLALA*FQRMLSLELQG
Trigger: CCCCTGTAGTTCAAGACTTAACATCCTTTGAAAGCATGCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp CCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTaGAGGAGGAACTCAGGCCTCTCCATGGGGACTGTC +
Preference number: 3 (lower is better)
Translates to: PELVLRSEPLKR*RRNSGLSMGTV
Trigger: GACAGTCCCCATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp GGAAAGCACCACTGTGAACTATCGAGCCTTGGACACTaGGACTCCGGACCTACCCAATCACTGACGAAAACG +
Preference number: 3 (lower is better)
Translates to: GKHHCELSSLGH*DSGPTQSLTKT
Trigger: CGTTTTCGTCAGTGATTGGGTAGGTCCGGAGTCCCAGTGTCCAAGGCTCGATAGTTCACAGTGGTGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGTCTTCCTTCTCCATTTaGTGTGCACGCGCGCGCGCA +
Preference number: 3 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILSSFSI*CARARA
Trigger: TGCGCGCGCGCGTGCACACAAAATGGAGAAGGAAGA...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGATGGCGTATTCCTTTaGCCCTCCACATTGCCAATG +
Preference number: 3 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIDGVFL*PSTLPM
Trigger: CATTGGCAATGTGGAGGGCAAAAGGAATACGCCATC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTGGCACCTCTGGCCACTaGTCCTGGTGCCACTGTACA +
Preference number: 3 (lower is better)
Translates to: TALEAWAVHACYLSTCVFGTSGH*SWCHCT
Trigger: TGTACAGTGGCACCAGGACAAGTGGCCAGAGGTGCC...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp GATCAACAGCAGATGCCGTCGTTCATGCCCTGCGTTTaGTCTTACTCAACAGCCAGCTTGTGGGAGTTCTCG +
Preference number: 3 (lower is better)
Translates to: DQQQMPSFMPCV*SYSTASLWEFS
Trigger: CGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCTGCTGTTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp ACCAGACCCCTGATCAACAGCAGATGCCGTCGTTCATaGCCTGCGTTTGATCTTACTCAACAGCCAGCTTGT +
Preference number: 3 (lower is better)
Translates to: TRPLINSRCRRS*PAFDLTQQPAC
Trigger: ACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCTGCTGTTGATCAGGGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp TTAGGGCAGCTGAGAAGGTACGAGGAGAGTGGGGGATaGATTAAAGTGCTTACCAAAGCAACCGGCACACAC +
Preference number: 3 (lower is better)
Translates to: LGQLRRYEESGG*IKVLTKATGTH
Trigger: GTGTGTGCCGGTTGCTTTGGTAAGCACTTTAATGCATCCCCCACTCTCCTCGTACCTTCTCAGCTGCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp CAGAGTCATTTACAGAGCTTCTCGGTACCACGTAGATaGGCCACAGGAAGCCTGGAAGGTCTCGGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: QSHLQSFSVPRR*ATGSLEGLGAK
Trigger: TTTTGCACCGAGACCTTCCAGGCTTCCTGTGGCCCATCTACGTGGTACCGAGAAGCTCTGTAAATGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CCA 72 bp CATGTCCTTCTGGTCAATAGAACTGGTCCTGAACTGTaGAGGGCCTGCTGCTGTGCCTGCTGTTTTATGTGC +
Preference number: 3 (lower is better)
Translates to: HVLLVNRTGPEL*RACCCACCFMC
Trigger: GCACATAAAACAGCAGGCACAGCAGCAGGCCCTCCACAGTTCAGGACCAGTTCTATTGACCAGAAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCAAAGTGGATTCCTGTTaGGGAACTGTGGCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVKVDSC*GTVAVG
Trigger: ACCCACTGCCACAGTTCCCAAACAGGAATCCACTTT...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGACAGTGTCACCTAGCTaGTGTCTTTGCTGGGAACTC +
Preference number: 3 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKTVSPS*CLCWEL
Trigger: GAGTTCCCAGCAAAGACACAAGCTAGGTGACACTGT...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTAGGGCCATCATTCTCTaGGCAAGATCTGTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPRAIIL*ARSVPE
Trigger: CTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCT...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGATGCGGCAGGAGCTGGTaGTGGTGCAGCAGCACTGTC +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRCGRSW*WCSSTV
Trigger: GACAGTGCTGCTGCACCACAACCAGCTCCTGCCGCA...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTACAGTGTCACCTAGCTaGTGTCTTTGCTGGGAACTC +
Preference number: 3 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPTVSPS*CLCWEL
Trigger: GAGTTCCCAGCAAAGACACAAGCTAGGTGACACTGT...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCAGACTTCCCAGACCTaGGATCACACACAAGAAACA +
Preference number: 3 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKQTSQT*DHTQET
Trigger: TGTTTCTTGTGTGTGATCCAAGGTCTGGGAAGTCTG...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGGTTTGCCAAGCAGCTTaGGCAAGTGTTGCCACATTA +
Preference number: 3 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKVCQAA*ASVATL
Trigger: TAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAAC...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAGGCACCTCTGGCCACTaGTCCTGGTGCCACTGTACA +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRGTSGH*SWCHCT
Trigger: TGTACAGTGGCACCAGGACAAGTGGCCAGAGGTGCC...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGATGCGGCAGGAGCTGGTaGTGGTGCAGCAGCACTGTC +
Preference number: 3 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRCGRSW*WCSSTV
Trigger: GACAGTGCTGCTGCACCACAACCAGCTCCTGCCGCA...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTGCCTCGTCCCACTGTTaGCTCGTTATGTACACAGGG +
Preference number: 3 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCASSHC*LVMYTG
Trigger: CCCTGTGTACATAACGAGCAAACAGTGGGACGAGGC...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 72 bp TATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAATGAATTCTCGGAGGCA +
Preference number: 3 (lower is better)
Translates to: YLLLRGHPPIRV*GTVHPNEFSEA
Trigger: TGCCTCCGAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR GCA 72 bp AGGCCTCAAATTTCAGAGAAATCACCCACCAGCCATTaGATAGTTGTCAGAACGGCCTTGACGCTCCACGTC +
Preference number: 3 (lower is better)
Translates to: RPQISEKSPTSH*IVVRTALTLHV
Trigger: GACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGATTTCTCTGAAATTTGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CACTATGACTTGAGTAGCACCCCAGCCTTAAATGGATaGCCACACAGGGAAAGAGCCAGCAGAAGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: HYDLSSTPALNG*PHRERASRRLK
Trigger: TTTCAGCCTTCTGCTGGCTCTTTCCCTGTGTGGGCATCCATTTAAGGCTGGGGTGCTACTCAAGTCATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CCTTCTTGGAGGAGTTCACGGCCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGTAGTTGTTCAACAGCT +
Preference number: 3 (lower is better)
Translates to: PSWRSSRPRPTV*SLCTQGSCSTA
Trigger: AGCTGTTGAACAACTACCCTGTGTACATAACGAGCAAACAGTGGGACGAGGCCGTGAACTCCTCCAAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR CCA 72 bp TCAGAGCTTAGACCGAGGAGGATGTGCACAGCTGGATaGGGCGTTTTCATCCATGACAATGGGAAACAGAAG +
Preference number: 3 (lower is better)
Translates to: SELRPRRMCTAG*GVFIHDNGKQK
Trigger: CTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACATCCTCCTCGGTCTAAGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp GTTTCCACATATGCACAACAGCTAGGTTCCCGACACTaGAGATTTCCTAGGCCAGACTTCCCAGACCTTGGA +
Preference number: 3 (lower is better)
Translates to: VSTYAQQLGSRH*RFPRPDFPDLG
Trigger: TCCAAGGTCTGGGAAGTCTGGCCTAGGAAATCTCCAGTGTCGGGAACCTAGCTGTTGTGCATATGTGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTACCCAGAGTTGGTGTaGAGATCAGAGCCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKYPELV*RSEPLK
Trigger: CTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGCAAACCAAGTCAATTaGACAACATCTTCAGACCTC +
Preference number: 3 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIANQVN*TTSSDL
Trigger: GAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTGC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAAGGGCCATCATTCTCTaGGCAAGATCTGTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: TAHSRAIILLARSVPEVKRAIIL*ARSVPE
Trigger: CTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCT...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTAGGGCCATCATTCTCTaGGCAAGATCTGTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: TALEAWAVHACYLSTCVFRAIIL*ARSVPE
Trigger: CTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCT...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGACAGCTACACTTTTCTaGATACCACGAGAGGCTCAA +
Preference number: 3 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKTATLF*IPREAQ
Trigger: TTGAGCCTCTCGTGGTATCAAGAAAAGTGTAGCTGT...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTCTAGAGCCTTCCTGCTaGACGCAAGAAATCATGGAT +
Preference number: 3 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPLEPSC*TQEIMD
Trigger: ATCCATGATTTCTTGCGTCAAGCAGGAAGGCTCTAG...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 72 bp CCTCCCAAAGTGTTGGTAGATTTTGAGAACTACGCTTaGCTGGGGCAAACAGAAGCGGCCATTCTGCTTACG +
Preference number: 3 (lower is better)
Translates to: PPKVLVDFENYA*LGQTEAAILLT
Trigger: CGTAAGCAGAATGGCCGCTTCTGTTTGCCCCAGTCAAGCGTAGTTCTCAAAATCTACCAACACTTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp TATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAATGAATTCTGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: YLLLRGHPPIRV*GTVHPNEFCGN
Trigger: GTTCCCACAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 72 bp GCGGAGGTCAGCATTGTAGTCCTTAGTTTCCACATATaGACAACAGCTAGGTTCCCGACACTGGAGATTTCC +
Preference number: 3 (lower is better)
Translates to: AEVSIVVLSFHI*TTARFPTLEIS
Trigger: GGAAATCTCCAGTGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGACCTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CTTTTGACGTGTTTGCCAAGCAGCTTTGGCAAGTGTTaGCACATTAAGCACACAGCAGGAAGACTCACACGG +
Preference number: 3 (lower is better)
Translates to: LLTCLPSSFGKC*HIKHTAGRLTR
Trigger: CCGTGTGAGTCTTCCTGCTGTGTGCTTAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAACACGTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp AAAATCCGAACCGAAAGCGTGAAACATGAGGTGCTATaGGATGCCTTTGGACATGACTCGAGAGCGAGGCTA +
Preference number: 3 (lower is better)
Translates to: KIRTESVKHEVL*DAFGHDSRARL
Trigger: TAGCCTCGCTCTCGAGTCATGTCCAAAGGCATCGCATAGCACCTCATGTTTCACGCTTTCGGTTCGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 72 bp TCCGAGGGCATCCACCAATCAGGGTTTGAGGTACAGTaGATCCTAATGAATTCTCGGAGGCACGTGACTTTA +
Preference number: 3 (lower is better)
Translates to: SEGIHQSGFEVQ*ILMNSRRHVTL
Trigger: TAAAGTCACGTGCCTCCGAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202131.4
3UTR CCA 72 bp AGCTGTAGTTACTATTGCGGTGCGAGTGATTTCCAATaGGACCAAGTCATCCTACAACACGCTGAGGCACCT +
Preference number: 3 (lower is better)
Translates to: SCSYYCGASDFQ*DQVILQHAEAP
Trigger: AGGTGCCTCAGCGTGTTGTAGGATGACTTGGTCCCATTGGAAATCACTCGCACCGCAATAGTAACTACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp CGTTCAGAGTTCAGGGATCTAGGGAAAGCTACATCTTaGGCTGAGTACAGAGACAAGCCTTGCAATCGGCAA +
Preference number: 3 (lower is better)
Translates to: RSEFRDLGKATS*AEYRDKPCNRQ
Trigger: TTGCCGATTGCAAGGCTTGTCTCTGTACTCAGCCCAAGATGTAGCTTTCCCTAGATCCCTGAACTCTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAAAAGTGGATTCCTGTTaGGGAACTGTGGCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRKVDSC*GTVAVG
Trigger: ACCCACTGCCACAGTTCCCAAACAGGAATCCACTTT...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAACAGTGTCACCTAGCTaGTGTCTTTGCTGGGAACTC +
Preference number: 3 (lower is better)
Translates to: TAHSRAIILLARSVPEVKTVSPS*CLCWEL
Trigger: GAGTTCCCAGCAAAGACACAAGCTAGGTGACACTGT...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCTACTCAACAGCCAGCTaGTGGGAGTTCTCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: SQCSPQVQSVISISNNYSYSTAS*WEFSLN
Trigger: GTTCAGCGAGAACTCCCACAAGCTGGCTGTTGAGTA...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATTACTCAACAGCCAGCTaGTGGGAGTTCTCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNYSTAS*WEFSLN
Trigger: GTTCAGCGAGAACTCCCACAAGCTGGCTGTTGAGTA...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGATCTTCCTTCTCCATTTaGTGTGCACGCGCGCGCGCA +
Preference number: 3 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRSSFSI*CARARA
Trigger: TGCGCGCGCGCGTGCACACAAAATGGAGAAGGAAGA...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGTTCCCTCCCAAAGTGTaGGTAGATTTTGAGAACTAC +
Preference number: 3 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKFPPKV*VDFENY
Trigger: GTAGTTCTCAAAATCTACCAACACTTTGGGAGGGAA...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp CTAGAGCCTTCCTGCTTGACGCAAGAAATCATGGATTaGGAGTGGTTGGAGTCCAGAAGTTTTCCTCCACAG +
Preference number: 3 (lower is better)
Translates to: LEPSCLTQEIMD*EWLESRSFPPQ
Trigger: CTGTGGAGGAAAACTTCTGGACTCCAACCACTCTCAATCCATGATTTCTTGCGTCAAGCAGGAAGGCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 72 bp CTTCTCTGGCAGCAAAGAAAATCCGAACCGAAAGCGTaGAACATGAGGTGCTATGCGATGCCTTTGGACATG +
Preference number: 3 (lower is better)
Translates to: LLWQQRKSEPKA*NMRCYAMPLDM
Trigger: CATGTCCAAAGGCATCGCATAGCACCTCATGTTTCACGCTTTCGGTTCGGATTTTCTTTGCTGCCAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 72 bp CAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATaGTTGTTACTTAAGCACCTGTGTATTTCCAAATCA +
Preference number: 3 (lower is better)
Translates to: QPFDSSGGLGCT*LLLKHLCISKS
Trigger: TGATTTGGAAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp TCCGAGGGCATCCACCAATCAGGGTTTGAGGTACAGTaGATCCTAATGAATTCTTTTCCTTTTCCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: SEGIHQSGFEVQ*ILMNSFPFPKA
Trigger: GGCCTTGGGAAAAGGAAAAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201528.2
3UTR-3UTR CAA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCAAAGTGGATTCCTGTTaGGGAACTGTGGCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: SQCSPQVQSVISISNNYSKVDSC*GTVAVG
Trigger: ACCCACTGCCACAGTTCCCAAACAGGAATCCACTTT...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATAAAGTGGATTCCTGTTaGGGAACTGTGGCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNKVDSC*GTVAVG
Trigger: ACCCACTGCCACAGTTCCCAAACAGGAATCCACTTT...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGATGCATTGACAAAGGCTaGTCCCAGGGCATGATGCTA +
Preference number: 3 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGCIDKG*SQGMML
Trigger: TAGCATCATGCCCTGGGACAAGCCTTTGTCAATGCA...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACAGACTTCCCAGACCTaGGATCACACACAAGAAACA +
Preference number: 3 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEEQTSQT*DHTQET
Trigger: TGTTTCTTGTGTGTGATCCAAGGTCTGGGAAGTCTG...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTCAGACTTCCCAGACCTaGGATCACACACAAGAAACA +
Preference number: 3 (lower is better)
Translates to: TALEAWAVHACYLSTCVFQTSQT*DHTQET
Trigger: TGTTTCTTGTGTGTGATCCAAGGTCTGGGAAGTCTG...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTGCAAACCAAGTCAATTaGACAACATCTTCAGACCTC +
Preference number: 3 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPANQVN*TTSSDL
Trigger: GAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTGC...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTGTGAACTATCGAGCCTaGGACACTGGGACTCCGGAC +
Preference number: 3 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPVNYRA*DTGTPD
Trigger: GTCCGGAGTCCCAGTGTCCAAGGCTCGATAGTTCAC...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTGTGAACTATCGAGCCTaGGACACTGGGACTCCGGAC +
Preference number: 3 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCVNYRA*DTGTPD
Trigger: GTCCGGAGTCCCAGTGTCCAAGGCTCGATAGTTCAC...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGAGAAGAACACAGCCCTaGCAGTCAGCTATGAAGCTT +
Preference number: 3 (lower is better)
Translates to: IIENRVKATGPRVSCYMPRRTQP*QSAMKL
Trigger: AAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCT...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGATACTCAACAGCCAGCTaGTGGGAGTTCTCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGYSTAS*WEFSLN
Trigger: GTTCAGCGAGAACTCCCACAAGCTGGCTGTTGAGTA...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCATACTCAACAGCCAGCTaGTGGGAGTTCTCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: IVKVIQALSQLKLMSAYAYSTAS*WEFSLN
Trigger: GTTCAGCGAGAACTCCCACAAGCTGGCTGTTGAGTA...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTTACCCAGAGTTGGTGTaGAGATCAGAGCCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: TALEAWAVHACYLSTCVFYPELV*RSEPLK
Trigger: CTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTA...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGTACCCAGAGTTGGTGTaGAGATCAGAGCCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: IIENRVKATGPRVSCYMPYPELV*RSEPLK
Trigger: CTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTA...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp AAAGACGAGAGAGAAAACAGCTGGTTTTTGGACAGATaGTACGAAGGCAGCTTAGCCTACACCAGAGGCAAC +
Preference number: 3 (lower is better)
Translates to: KDERENSWFLDR*YEGSLAYTRGN
Trigger: GTTGCCTCTGGTGTAGGCTAAGCTGCCTTCGTATCATCTGTCCAAAAACCAGCTGTTTTCTCTCTCGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR GCA 72 bp GCTTCCCTGAAGATCTGGGACTGGAGACACCCTCAATaGCTAGCTAGAAATGACTTCATGCCAAATGTACAT +
Preference number: 3 (lower is better)
Translates to: ASLKIWDWRHPQ*LARNDFMPNVH
Trigger: ATGTACATTTGGCATGAAGTCATTTCTAGCTAGGCATTGAGGGTGTCTCCAGTCCCAGATCTTCAGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp TGGACTCTAAGTGACATGGGAATGGACATTCACAACTaGAGCTCTTACACAAGAAACCACACAGCACTGGGA +
Preference number: 3 (lower is better)
Translates to: WTLSDMGMDIHN*SSYTRNHTALG
Trigger: TCCCAGTGCTGTGTGGTTTCTTGTGTAAGAGCTCCAGTTGTGAATGTCCATTCCCATGTCACTTAGAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCATGCATTGACAAAGGCTaGTCCCAGGGCATGATGCTA +
Preference number: 3 (lower is better)
Translates to: IVKVIQALSQLKLMSAYACIDKG*SQGMML
Trigger: TAGCATCATGCCCTGGGACAAGCCTTTGTCAATGCA...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GTCAGCATTGTAGTCCTTAGTTTCCACATATGCACAACAGCTAGGTTCCCGACAACAGCTACACTTTTCTaGATACCACGAGAGGCTCAA +
Preference number: 3 (lower is better)
Translates to: VSIVVLSFHICTTARFPTTATLF*IPREAQ
Trigger: TTGAGCCTCTCGTGGTATCAAGAAAAGTGTAGCTGT...TGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAACCTTCCCAGGAGTTTaGTCCACTTTCTCAGTTGCA +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRTFPGV*STFSVA
Trigger: TGCAACTGAGAAAGTGGACAAAACTCCTGGGAAGGT...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCGTTTGCCAAGCAGCTTaGGCAAGTGTTGCCACATTA +
Preference number: 3 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIVCQAA*ASVATL
Trigger: TAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAAC...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAGTTTGCCAAGCAGCTTaGGCAAGTGTTGCCACATTA +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRVCQAA*ASVATL
Trigger: TAATGTGGCAACACTTGCCAAAGCTGCTTGGCAAAC...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGGATGGCGTATTCCTTTaGCCCTCCACATTGCCAATG +
Preference number: 3 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVDGVFL*PSTLPM
Trigger: CATTGGCAATGTGGAGGGCAAAAGGAATACGCCATC...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAGAGCTCTTCATTTTCTaGTTGCAACGAGATAACCTC +
Preference number: 3 (lower is better)
Translates to: TAHSRAIILLARSVPEVKELFIF*LQRDNL
Trigger: GAGGTTATCTCGTTGCAACAAGAAAATGAAGAGCTC...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAATTGTTCAACAGCTGCTaGCTTCCCTCGGTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: NIESKGCVIILTKLASPKLFNSC*LPSVGC
Trigger: GCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAA...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACGCATCGCTGAACACTTaGTTTATCTGCTCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNASLNT*FICSSE
Trigger: CTCGGAGGAGCAGATAAACAAAGTGTTCAGCGATGC...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAGCATCGCTGAACACTTaGTTTATCTGCTCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRASLNT*FICSSE
Trigger: CTCGGAGGAGCAGATAAACAAAGTGTTCAGCGATGC...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR TCA 72 bp CTACAAGACAACCAAGGGAAGCTTGTCCAAGCTTACTaGCTAAATAAACCACCAAAGAGAGGAACGGGACTC +
Preference number: 3 (lower is better)
Translates to: LQDNQGKLVQAY*LNKPPKRGTGL
Trigger: GAGTCCCGTTCCTCTCTTTGGTGGTTTATTTAGTCAGTAAGCTTGGACAAGCTTCCCTTGGTTGTCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp TATCTGCTCCTCCGAGGGCATCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAATGAATTCTTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: YLLLRGHPPIRV*GTVHPNEFFSF
Trigger: AAAGGAAAAGAATTCATTAGGATGCACTGTACCTCAAACCCTGATTGGTGGATGCCCTCGGAGGAGCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201528.2
3UTR CCA 72 bp ACTTTCTCAGTTGCAGAAGAGGCACAAGTCATTAAATaGCAGGGATACGCAGAAACCACACACCTGCAGATT +
Preference number: 3 (lower is better)
Translates to: TFSVAEEAQVIK*QGYAETTHLQI
Trigger: AATCTGCAGGTGTGTGGTTTCTGCGTATCCCTGCCATTTAATGACTTGTGCCTCTTCTGCAACTGAGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTACAGTGTCACCTAGCTaGTGTCTTTGCTGGGAACTC +
Preference number: 3 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCTVSPS*CLCWEL
Trigger: GAGTTCCCAGCAAAGACACAAGCTAGGTGACACTGT...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATTACTCAACAGCCAGCTaGTGGGAGTTCTCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNYSTAS*WEFSLN
Trigger: GTTCAGCGAGAACTCCCACAAGCTGGCTGTTGAGTA...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACATACCCAGAGTTGGTGTaGAGATCAGAGCCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: GANPTGHCSLYTISIVLTYPELV*RSEPLK
Trigger: CTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTA...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTGCATTGACAAAGGCTaGTCCCAGGGCATGATGCTA +
Preference number: 3 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPCIDKG*SQGMML
Trigger: TAGCATCATGCCCTGGGACAAGCCTTTGTCAATGCA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAACAGCTACACTTTTCTaGATACCACGAGAGGCTCAA +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRTATLF*IPREAQ
Trigger: TTGAGCCTCTCGTGGTATCAAGAAAAGTGTAGCTGT...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGAACCTTCCCAGGAGTTTaGTCCACTTTCTCAGTTGCA +
Preference number: 3 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRTFPGV*STFSVA
Trigger: TGCAACTGAGAAAGTGGACAAAACTCCTGGGAAGGT...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACTGGGCTGTACATGCTaGTTACTTAAGCACCTGTGT +
Preference number: 3 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVLGCTC*LLKHLC
Trigger: ACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCACTAGAGCCTTCCTGCTaGACGCAAGAAATCATGGAT +
Preference number: 3 (lower is better)
Translates to: IVKVIQALSQLKLMSAYALEPSC*TQEIMD
Trigger: ATCCATGATTTCTTGCGTCAAGCAGGAAGGCTCTAG...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCCTCTTCATTTTCTTGTaGCAACGAGATAACCTCCTG +
Preference number: 3 (lower is better)
Translates to: SQCSPQVQSVISISNNYSLFIFL*QRDNLL
Trigger: CAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGAG...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR GCA 72 bp TACCGCAAAACACAGAACTCAAATGAGGGTCATGTTTaGGTTCTGGACATAATTCACACCTTCCCAGGAGTT +
Preference number: 3 (lower is better)
Translates to: YRKTQNSNEGHV*VLDIIHTFPGV
Trigger: AACTCCTGGGAAGGTGTGAATTATGTCCAGAACGCAAACATGACCCTCATTTGAGTTCTGTGTTTTGCGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGACAGTGTCACCTAGCTaGTGTCTTTGCTGGGAACTC +
Preference number: 3 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMTVSPS*CLCWEL
Trigger: GAGTTCCCAGCAAAGACACAAGCTAGGTGACACTGT...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTCAGACTTCCCAGACCTaGGATCACACACAAGAAACA +
Preference number: 3 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCQTSQT*DHTQET
Trigger: TGTTTCTTGTGTGTGATCCAAGGTCTGGGAAGTCTG...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTACCTTCCCAGGAGTTTaGTCCACTTTCTCAGTTGCA +
Preference number: 3 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPTFPGV*STFSVA
Trigger: TGCAACTGAGAAAGTGGACAAAACTCCTGGGAAGGT...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGACTTTTGCCCTCCACATaGCCAATGTTAGTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRLLPST*PMLVLP
Trigger: AGGAAGAACTAACATTGGCAATGTGGAGGGCAAAAG...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAATACTTTTGTTGCAATTaGGGGAATGGTGATTCAACA +
Preference number: 3 (lower is better)
Translates to: TAHSRAIILLARSVPEVKYFCCN*GNGDST
Trigger: TGTTGAATCACCATTCCCCAAATTGCAACAAAAGTA...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTTCCCTCCCAAAGTGTaGGTAGATTTTGAGAACTAC +
Preference number: 3 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIFPPKV*VDFENY
Trigger: GTAGTTCTCAAAATCTACCAACACTTTGGGAGGGAA...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGATTCCCTCCCAAAGTGTaGGTAGATTTTGAGAACTAC +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRFPPKV*VDFENY
Trigger: GTAGTTCTCAAAATCTACCAACACTTTGGGAGGGAA...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGCATCGCTGAACACTTaGTTTATCTGCTCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNASLNT*FICSSE
Trigger: CTCGGAGGAGCAGATAAACAAAGTGTTCAGCGATGC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
3UTR TCA 72 bp ACAGTGTCACCTAGCTTGTGTCTTTGCTGGGAACTCTaGAATGAAGTCTTAGGAAATCGAAGACAGCTTACT +
Preference number: 3 (lower is better)
Translates to: TVSPSLCLCWEL*NEVLGNRRQLT
Trigger: AGTAAGCTGTCTTCGATTTCCTAAGACTTCATTTCAGAGTTCCCAGCAAAGACACAAGCTAGGTGACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp AGCTGTCACAGACTAACACAGACCTGTACTGCGAGATaGTACCGCACTGAGGAAATTATACACTTCAAATTC +
Preference number: 3 (lower is better)
Translates to: SCHRLTQTCTAR*YRTEEIIHFKF
Trigger: GAATTTGAAGTGTATAATTTCCTCAGTGCGGTATCATCTCGCAGTACAGGTCTGTGTTAGTCTGTGACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp TTTTATATGGGTCATCTGAACTCAGACCCTCAAGCTTaGATTCTACTAACTGAGAATCACTTCCCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: FYMGHLNSDPQA*ILLTENHFPRR
Trigger: CCTTCTGGGGAAGTGATTCTCAGTTAGTAGAATGCAAGCTTGAGGGTCTGAGTTCAGATGACCCATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CCA 72 bp CAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTaGGGAATGCAAGTGGCCTCTAATTCGATGGCGTAT +
Preference number: 3 (lower is better)
Translates to: QFSQYFLKSNIV*GMQVASNSMAY
Trigger: ATACGCCATCGAATTAGAGGCCACTTGCATTCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp ATGGGTATCGCTAGCAGATGTACTTTTGTTGCAATTTaGGGAATGGTGATTCAACAAGAAGAACACAGCCCT +
Preference number: 3 (lower is better)
Translates to: MGIASRCTFVAI*GMVIQQEEHSP
Trigger: AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACATCTGCTAGCGATACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTTACCCAGAGTTGGTGTaGAGATCAGAGCCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCYPELV*RSEPLK
Trigger: CTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTA...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATATTGAATCTAAAGGATGCGTGATTATTCTGACAAAACTGGCCTCCCCAAAATGCATTGACAAAGGCTaGTCCCAGGGCATGATGCTA +
Preference number: 3 (lower is better)
Translates to: NIESKGCVIILTKLASPKCIDKG*SQGMML
Trigger: TAGCATCATGCCCTGGGACAAGCCTTTGTCAATGCA...TTTTGGGGAGGCCAGTTTTGTCAGAATAATCACGCATCCTTTAGATTCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGGCAAACCAAGTCAATTaGACAACATCTTCAGACCTC +
Preference number: 3 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVANQVN*TTSSDL
Trigger: GAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTGC...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTCTTTTGCCCTCCACATaGCCAATGTTAGTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPLLPST*PMLVLP
Trigger: AGGAAGAACTAACATTGGCAATGTGGAGGGCAAAAG...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTATTCCCTCCCAAAGTGTaGGTAGATTTTGAGAACTAC +
Preference number: 3 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVFPPKV*VDFENY
Trigger: GTAGTTCTCAAAATCTACCAACACTTTGGGAGGGAA...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATCTGGGCTGTACATGCTaGTTACTTAAGCACCTGTGT +
Preference number: 3 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNLGCTC*LLKHLC
Trigger: ACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAG...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGATTAGGATCAATGGATTaGTCACAGTTTCTCCACAAG +
Preference number: 3 (lower is better)
Translates to: TRSKVVLYVPASLHRESRLGSMD*SQFLHK
Trigger: CTTGTGGAGAAACTGTGACAAATCCATTGATCCTAA...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTTAGGATCAATGGATTaGTCACAGTTTCTCCACAAG +
Preference number: 3 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGILGSMD*SQFLHK
Trigger: CTTGTGGAGAAACTGTGACAAATCCATTGATCCTAA...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACGAGCTCTTCATTTTCTaGTTGCAACGAGATAACCTC +
Preference number: 3 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNELFIF*LQRDNL
Trigger: GAGGTTATCTCGTTGCAACAAGAAAATGAAGAGCTC...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
3UTR TCA 72 bp GGGTCAAGAGTTTTAAGTCCGAGAATGTGTAAAGTGTaGCGGAATTACATGCTTTGGACTCTAAGTGACATG +
Preference number: 3 (lower is better)
Translates to: GSRVLSPRMCKV*RNYMLWTLSDM
Trigger: CATGTCACTTAGAGTCCAAAGCATGTAATTCCGTCACACTTTACACATTCTCGGACTTAAAACTCTTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp GACTTAAGGCTACGGAAGCTGTGCGTTAGGAACTTATaGAACGAGGCATTGGAAAATGGTTTTCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: DLRLRKLCVRNL*NEALENGFQSL
Trigger: CAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGCACAGCTTCCGTAGCCTTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp ACTTTCCAACAGCCTGGTCATGCTGGAATTTTAGACTaGTCCACAGGACTGATACTAGTGAATTCGTGTATT +
Preference number: 3 (lower is better)
Translates to: TFQQPGHAGILD*STGLILVNSCI
Trigger: AATACACGAATTCACTAGTATCAGTCCTGTGGATCAGTCTAAAATTCCAGCATGACCAGGCTGTTGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR CCA 72 bp TTTCAGGTATGCTATGTACCTAACAAGCAAGCTGGATaGAGGCCCATGGAAGCAAGATACGATCTTTTATTT +
Preference number: 3 (lower is better)
Translates to: FQVCYVPNKQAG*RPMEARYDLLF
Trigger: AAATAAAAGATCGTATCTTGCTTCCATGGGCCTCCATCCAGCTTGCTTGTTAGGTACATAGCATACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGATTAGGATCAATGGATTaGTCACAGTTTCTCCACAAG +
Preference number: 3 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRLGSMD*SQFLHK
Trigger: CTTGTGGAGAAACTGTGACAAATCCATTGATCCTAA...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACCCTACACTCCAGTTTaGCTAAATGTGGCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVPYTPV*LNVAFS
Trigger: AGAGAAGGCCACATTTAGCAAAACTGGAGTGTAGGG...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR-3UTR CAA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATGCAAACCAAGTCAATTaGACAACATCTTCAGACCTC +
Preference number: 3 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNANQVN*TTSSDL
Trigger: GAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTGC...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACAGTGTACTTTTGTTGCAATTaGGGGAATGGTGATTCAACA +
Preference number: 3 (lower is better)
Translates to: ANPTGHCSLYTISIVLTVYFCCN*GNGDST
Trigger: TGTTGAATCACCATTCCCCAAATTGCAACAAAAGTA...CACTGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR-3UTR CAA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATTATGTCCCTGCATCTTaGCACAGGGAATCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNYVPAS*HRESRK
Trigger: TTTTCTAGATTCCCTGTGCAAAGATGCAGGGACATA...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp TGCCAGAATGACGTGGAAAAGCAAACCAAGTCAATTTaGCAACATCTTCAGACCTCTAGACAACAAACTCAA +
Preference number: 3 (lower is better)
Translates to: CQNDVEKQTKSI*QHLQTSRQQTQ
Trigger: TTGAGTTTGTTGTCTAGAGGTCTGAAGATGTTGTCAAATTGACTTGGTTTGCTTTTCCACGTCATTCTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp ACTAACACAGACCTGTACTGCGAGATGATACCGCACTaGGGAAATTATACACTTCAAATTCTAAGTCACCAA +
Preference number: 3 (lower is better)
Translates to: TNTDLYCEMIPH*GNYTLQILSHQ
Trigger: TTGGTGACTTAGAATTTGAAGTGTATAATTTCCTCAGTGCGGTATCATCTCGCAGTACAGGTCTGTGTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CCA 72 bp TTCAGTAGTCAAACTGACAAGGCCAGTAATTTAGTGTaGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCC +
Preference number: 3 (lower is better)
Translates to: FSSQTDKASNLV*EFQFSQYFLKS
Trigger: GGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGCCTTGTCAGTTTGACTACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR TCA 72 bp TGGCTGATAATGCGAGTAGCTTTGCCATCAGTTAAGTaGCATTTCCCTCCAATGTTTCAAGTGGTTATTTTT +
Preference number: 3 (lower is better)
Translates to: WLIMRVALPSVK*HFPPMFQVVIF
Trigger: AAAAATAACCACTTGAAACATTGGAGGGAAATGTCACTTAACTGATGGCAAAGCTACTCGCATTATCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp CCAGATGTAATTGACAACAGCTCATCAGTAGTCCACTaGACTTCTTATTATTATCATCCAGACCTTGCAATA +
Preference number: 3 (lower is better)
Translates to: PDVIDNSSSVVH*TSYYYHPDLAI
Trigger: TATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGATGAGCTGTTGTCAATTACATCTGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp GTGTTTGTAGATGACACTCATAATTTTCACAAACGCTaGCCATTTAGCTTTTGGTTCCACAAAGAACATAGT +
Preference number: 3 (lower is better)
Translates to: VFVDDTHNFHKR*PFSFWFHKEHS
Trigger: ACTATGTTCTTTGTGGAACCAAAAGCTAAATGGGCAGCGTTTGTGAAAATTATGAGTGTCATCTACAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR GCA 72 bp AAAGCTACATCTTGGGCTGAGTACAGAGACAAGCCTTaGAATCGGCAATGTGGTATAAATACATTTAAATTA +
Preference number: 3 (lower is better)
Translates to: KATSWAEYRDKP*NRQCGINTFKL
Trigger: TAATTTAAATGTATTTATACCACATTGCCGATTGCAAGGCTTGTCTCTGTACTCAGCCCAAGATGTAGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
3UTR TCA 72 bp ATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATaGAGCTTAGAATCAAAAATTTTTGGTAATCTAGTG +
Preference number: 3 (lower is better)
Translates to: IQQEEHSPCSQL*SLESKIFGNLV
Trigger: CACTAGATTACCAAAAATTTTTGATTCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR GCA 90 bp CCTCCAGCAGGCCTTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTTGGCGGCTGCTCGGCGGGCTaGGGCAGGAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PPAGLAPKRHRPGSPGLGGCSAG*GRSWLW
Trigger: CCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCC...GCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAAGGCCTGCTGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTGCACAGCTGGATGGGGCCTTCCCTCGGTGGGCTaGTCGGCGGGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: QKGNSELRPRRMCTAGWGLPSVG*SAGCGR
Trigger: CCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAG...GCCCCATCCAGCTGTGCACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCCGCGCTGCTTGTAGATaGGGGGCGCGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVRAACR*GARWAP
Trigger: AGGGGCCCAGCGCGCCCCGCATCTACAAGCAGCGCG...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR GCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGGGCTGCTCGGCGGGCTaGGGCAGGAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKGCSAG*GRSWLW
Trigger: CCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCC...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ATGCATCCAGCTGCACCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGCTTCCCTCGGTGGGCTaGTCGGCGGGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: MHPAAPSKTAVTCLLVILLPSVG*SAGCGR
Trigger: CCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAG...CAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGGTGCAGCTGGATGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp AATCACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCGCGGCTCGCTGCTGCTaGTGGGCACGGCGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: NHEIQSCPLCPCIFAQGIAARCC*WARRRA
Trigger: CGCTCGCCGCCGTGCCCATCAGCAGCAGCGAGCCGC...GATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp CCCCCGAAAATCCTAAAGTGGATTCCTGTTTGGGAACTGTGGCAGTGGGTCAAGGTGCACCGGGGAGGCTaGGAGAGGGTCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: PPKILKWIPVWELWQWVKVHRGG*ERVHIS
Trigger: GCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCAC...CTTGACCCACTGCCACAGTTCCCAAACAGGAATCCACTTTAGGATTTTCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATGTGCACCGGGGAGGCTaGGAGAGGGTCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHVHRGG*ERVHIS
Trigger: GCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCAC...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTCGCGCTGCTTGTAGATaGGGGGCGCGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCRAACR*GARWAP
Trigger: AGGGGCCCAGCGCGCCCCGCATCTACAAGCAGCGCG...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR GCA 90 bp TACACCAGCCCGGCAACCACATTTTCCTCACCAATGACAGGGCACAGCTGCATCGATCATCCGGCTCTCTaGACTGAGCTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YTSPATTFSSPMTGHSCIDHPAL*TELQAG
Trigger: GCCAGCCTGGAGCTCAGTGCAGAGAGCCGGATGATC...GATGCAGCTGTGCCCTGTCATTGGTGAGGAAAATGTGGTTGCCGGGCTGGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAGGCTGCTCGGCGGGCTaGGGCAGGAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: TAHSRAIILLARSVPEVKGCSAG*GRSWLW
Trigger: CCACAACCAGCTCCTGCCGCAGCCCGCCGAGCAGCC...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp GTCAGCATTGTAGTCCTTAGTTTCCACATATGCACAACAGCTAGGTTCCCGACAGTCTGTCGTAGCGCTTaGCCAGCGCCGGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: VSIVVLSFHICTTARFPTVCRSA*PAPAAG
Trigger: GCCGGCGGCCGGCGCTGGCCAAGCGCTACGACAGAC...TGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
3UTR CAA 72 bp CAAGGTGTCAGTCAGGCCAAGCTTCGTGCCAGCCCTTaGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGT +
Preference number: 4 (lower is better)
Translates to: QGVSQAKLRASP*TALEAWAVHAC
Trigger: ACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCACGAAGCTTGGCCTGACTGACACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp ATCATAGAAAATAGAGTAAAGGCAACTGGCCCCCGTGTTAGCTGCTACATGCCGTCCGGCTCTCTGCACTaGGCTCCAGGCTGGCGCCGT +
Preference number: 4 (lower is better)
Translates to: IIENRVKATGPRVSCYMPSGSLH*APGWRR
Trigger: ACGGCGCCAGCCTGGAGCTCAGTGCAGAGAGCCGGA...CGGCATGTAGCAGCTAACACGGGGGCCAGTTGCCTTTACTCTATTTTCTATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTTCCGGCTCTCTGCACTaGGCTCCAGGCTGGCGCCGT +
Preference number: 4 (lower is better)
Translates to: TALEAWAVHACYLSTCVFSGSLH*APGWRR
Trigger: ACGGCGCCAGCCTGGAGCTCAGTGCAGAGAGCCGGA...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGACGCGCTGCTTGTAGATaGGGGGCGCGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGRAACR*GARWAP
Trigger: AGGGGCCCAGCGCGCCCCGCATCTACAAGCAGCGCG...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR GCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATCGCGCTGCTTGTAGATaGGGGGCGCGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNRAACR*GARWAP
Trigger: AGGGGCCCAGCGCGCCCCGCATCTACAAGCAGCGCG...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR GCA 90 bp AGATGCCGTCGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAACGAGCCACCGTTGTaGAGGAAAGTCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: RCRRSCPAFDLTQQPACGNEPPL*RKVPTA
Trigger: GGCCGTGGGGACTTTCCTGCACAACGGTGGCTCGTT...CCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACGACGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGGWGTS*GRCRGR
Trigger: GCGGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCC...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCGGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SQCSPQVQSVISISNNYSGWGTS*GRCRGR
Trigger: GCGGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCC...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAAGTGCACCGGGGAGGCTaGGAGAGGGTCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: TAHSRAIILLARSVPEVKVHRGG*ERVHIS
Trigger: GCTGATGTGGACCCTCTCTCAGCCTCCCCGGTGCAC...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGACTTCCCTCGGTGGGCTaGTCGGCGGGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRLPSVG*SAGCGR
Trigger: CCTGCCGCAGCCCGCCGAGCAGCCCACCGAGGGAAG...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTAGTCTGTCGTAGCGCTTaGCCAGCGCCGGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVVCRSA*PAPAAG
Trigger: GCCGGCGGCCGGCGCTGGCCAAGCGCTACGACAGAC...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTTCCACATCAGCCAGGTaGCCATACTCACTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VQEAAGALCTSEASGKNPSTSAR*PYSLAD
Trigger: ATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGA...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp TATTCCCGTGGCAGTGGCTACCCCAGACCTGTCCGCTaGCATGAGAGTCATCTAGGATGGTTGAGAGTCACG +
Preference number: 4 (lower is better)
Translates to: YSRGSGYPRPVR*HESHLGWLRVT
Trigger: CGTGACTCTCAACCATCCTAGATGACTCTCATGCAAGCGGACAGGTCTGGGGTAGCCACTGCCACGGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
CDS-3UTR TCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACGCCCCTGTCGGGCATaGCCTACAGCATCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEERPCRA*PTASLN
Trigger: GTTCAGCGATGCTGTAGGTCATGCCCGACAGGGGCG...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCTGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRCSTAA*FPRWAA
Trigger: AGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACA...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTaGACGCTCCACGTCTACAATACCAGACCCCTGATC +
Preference number: 4 (lower is better)
Translates to: SPTSHCIVVRTA*TLHVYNTRPLI
Trigger: GATCAGGGGTCTGGTATTGTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 72 bp CAGCCAGGTGGCCATACTCACTGGCTGATGAGGTGTTaGGAGTCGGGAAGCTCCCCGAGAGCAGATAATTTT +
Preference number: 4 (lower is better)
Translates to: QPGGHTHWLMRC*ESGSSPRADNF
Trigger: AAAATTATCTGCTCTCGGGGAGCTTCCCGACTCCAAACACCTCATCAGCCAGTGAGTATGGCCACCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCAGGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: IVKVIQALSQLKLMSAYAGWGTS*GRCRGR
Trigger: GCGGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCC...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACTCCGGCTCTCTGCACTaGGCTCCAGGCTGGCGCCGT +
Preference number: 4 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNSGSLH*APGWRR
Trigger: ACGGCGCCAGCCTGGAGCTCAGTGCAGAGAGCCGGA...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp ACAGGGCTAAGGACTTGTAGAAACAGCTACACTTTTCTTGATACCACGAGAGGCGGCTGCGGCAGGAGCTaGTTGTGGTGCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TGLRTCRNSYTFLDTTRGGCGRS*LWCSST
Trigger: AGTGCTGCTGCACCACAACCAGCTCCTGCCGCAGCC...GCCTCTCGTGGTATCAAGAAAAGTGTAGCTGTTTCTACAAGTCCTTAGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp AGCCAGTGTTCTCCGCAGGTCCAAAGCGTAATCTCCATCAGTAACAATTATAGCGGCTGCGGCAGGAGCTaGTTGTGGTGCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SQCSPQVQSVISISNNYSGCGRS*LWCSST
Trigger: AGTGCTGCTGCACCACAACCAGCTCCTGCCGCAGCC...GCTATAATTGTTACTGATGGAGATTACGCTTTGGACCTGCGGAGAACACTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp TGCTGTTTTATGTGCCAGGGCAGTGTTCTGGTGGCCTaGTCGCGGTCCTACGTGTCTGTGTTTATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CCFMCQGSVLVA*SRSYVSVFILK
Trigger: CTTCAGGATAAACACAGACACGTAGGACCGCGACAAGGCCACCAGAACACTGCCCTGGCACATAAAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
CDS-3UTR TCA 90 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACACCCCTTTCACAATGTaGCACTGGTCCTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPTSHCIVVRTALTLHVYTPFTM*HWSCLS
Trigger: TGAAAGACAGGACCAGTGTCACATTGTGAAAGGGGT...GTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp GGGGCAAACCCAACAGGTCACTGTAGTCTTTACACAATCTCTATAGTTCTCACACGCCCCTGTCGGGCATaGCCTACAGCATCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GANPTGHCSLYTISIVLTRPCRA*PTASLN
Trigger: GTTCAGCGATGCTGTAGGTCATGCCCGACAGGGGCG...TGTGAGAACTATAGAGATTGTGTAAAGACTACAGTGACCTGTTGGGTTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp CCCCCGAAAATCCTAAAGTGGATTCCTGTTTGGGAACTGTGGCAGTGGGTCAAGACACGACTGCACTGTTaGGCAAAGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PPKILKWIPVWELWQWVKTRLHC*AKASRI
Trigger: GATCCTGGATGCCTTTGCCCAACAGTGCAGTCGTGT...CTTGACCCACTGCCACAGTTCCCAAACAGGAATCCACTTTAGGATTTTCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATGGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHGWGTS*GRCRGR
Trigger: GCGGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCC...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGACCCCTTTCACAATGTaGCACTGGTCCTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKTPFTM*HWSCLS
Trigger: TGAAAGACAGGACCAGTGTCACATTGTGAAAGGGGT...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp CTGGTGATCCATCCCTTCATAAAACGAGCCACCGTTGTGCAGGAAAGTCCCCACACCCCTTTCACAATGTaGCACTGGTCCTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVIHPFIKRATVVQESPHTPFTM*HWSCLS
Trigger: TGAAAGACAGGACCAGTGTCACATTGTGAAAGGGGT...GTGGGGACTTTCCTGCACAACGGTGGCTCGTTTTATGAAGGGATGGATCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
CDS-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCCCACCAATCAGGGTTTaGGGTACAGTGCATCCTAAT +
Preference number: 4 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRPPIRV*GTVHPN
Trigger: ATTAGGATGCACTGTACCTCAAACCCTGATTGGTGG...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp TCACCCACCAGCCATTGCATAGTTGTCAGAACGGCCTTGACGCTCCACGTCTACGACCTACAGCATCGCTaGACACTTTGTTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: SPTSHCIVVRTALTLHVYDLQHR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTC...GTAGACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CCCCCGAAAATCCTAAAGTGGATTCCTGTTTGGGAACTGTGGCAGTGGGTCAAGCCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: PPKILKWIPVWELWQWVKPRPTV*SLCTQG
Trigger: ACCCTGTGTACATAACGAGCAAACAGTGGGACGAGG...CTTGACCCACTGCCACAGTTCCCAAACAGGAATCCACTTTAGGATTTTCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCCCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVPVSPD*TDLFLF
Trigger: GAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGG...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp CAGCTGCATCCTGAGATATTTTTAACTCAAGTCTACTTCCAACCAACGCTGAACGGCTGCGGCAGGAGCTaGTTGTGGTGCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: QLHPEIFLTQVYFQPTLNGCGRS*LWCSST
Trigger: AGTGCTGCTGCACCACAACCAGCTCCTGCCGCAGCC...GTTCAGCGTTGGTTGGAAGTAGACTTGAGTTAAAAATATCTCAGGATGCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp TTGCTCCCAAGAGGCACAGGCCAGGCTCACCTGGCCTaGGCATGCTTTCAAAGGATGTTAAGTCTTGAACTA +
Preference number: 4 (lower is better)
Translates to: LLPRGTGQAHLA*ACFQRMLSLEL
Trigger: TAGTTCAAGACTTAACATCCTTTGAAAGCATGCCAAGGCCAGGTGAGCCTGGCCTGTGCCTCTTGGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 72 bp AGCTCTTACACAAGAAACCACACAGCACTGGGACGATaGTGTCCACTAGTCCCCAGATCCGTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSYTRNHTALGR*CPLVPRSVLCL
Trigger: AAGACACAGGACGGATCTGGGGACTAGTGGACACAATCGTCCCAGTGCTGTGTGGTTTCTTGTGTAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp CTTGTCAACCACAGCGAGGAGGTTGCCCTTCTGATGGACACAGTGAGTTCTGTCCAAGAAATCATGGATTaGGAGTGGTTGGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVNHSEEVALLMDTVSSVQEIMD*EWLESR
Trigger: TCTGGACTCCAACCACTCTCAATCCATGATTTCTTG...GACAGAACTCACTGTGTCCATCAGAAGGGCAACCTCCTCGCTGTGGTTGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCTTTGGAGAGAGTCAGTaGACACTCTCAAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRFGESQ*TLSKRQ
Trigger: CTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAA...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CGTTCATGCCCTGCGTTTGATCTTACTCAACAGCCAGCTTGTGGGAGTTCTCGCGGGTTTGAGGTACAGTaGATCCTAATGAATTCTCGG +
Preference number: 4 (lower is better)
Translates to: RSCPAFDLTQQPACGSSRGFEVQ*ILMNSR
Trigger: CCGAGAATTCATTAGGATGCACTGTACCTCAAACCC...GCGAGAACTCCCACAAGCTGGCTGTTGAGTAAGATCAAACGCAGGGCATGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp ACAGCTCATTCCAGGGCCATCATTCTCTTGGCAAGATCTGTGCCTGAGGTTAAATCCACATCAGCCAGGTaGCCATACTCACTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TAHSRAIILLARSVPEVKSTSAR*PYSLAD
Trigger: ATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGA...TTTAACCTCAGGCACAGATCTTGCCAAGAGAATGATGGCCCTGGAATGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp AAGGCCTCAAATTTCAGAGAAATCACCCACCAGCCATaGCATAGTTGTCAGAACGGCCTTGACGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: KASNFREITHQP*HSCQNGLDAPR
Trigger: ACGTGGAGCGTCAAGGCCGTTCTGACAACTATGCAATGGCTGGTGGGTGATTTCTCTGAAATTTGAGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp CCAAGTAAGACTGCAGTAACCTGTCTCCTTGTCATCCTGACGAAGGCATGGCCTCAAGAAATCATGGATTaGGAGTGGTTGGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSKTAVTCLLVILTKAWPQEIMD*EWLESR
Trigger: TCTGGACTCCAACCACTCTCAATCCATGATTTCTTG...AGGCCATGCCTTCGTCAGGATGACAAGGAGACAGGTTACTGCAGTCTTACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAAATGTTGTCAGAGGTCTaGCTCTGGACCCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEEMLSEV*LWTPFT
Trigger: TGTGAAAGGGGTCCAGAGTCAGACCTCTGACAACAT...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTATGTTGTCAGAGGTCTaGCTCTGGACCCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCMLSEV*LWTPFT
Trigger: TGTGAAAGGGGTCCAGAGTCAGACCTCTGACAACAT...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp GTCAGCATTGTAGTCCTTAGTTTCCACATATGCACAACAGCTAGGTTCCCGACATCCACATCAGCCAGGTaGCCATACTCACTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSIVVLSFHICTTARFPTSTSAR*PYSLAD
Trigger: ATCAGCCAGTGAGTATGGCCACCTGGCTGATGTGGA...TGTCGGGAACCTAGCTGTTGTGCATATGTGGAAACTAAGGACTACAATGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGAGGCAGGAGCTGGTTGTaGTGCAGCAGCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGGRSWL*CSSTVF
Trigger: GAAGACAGTGCTGCTGCACCACAACCAGCTCCTGCC...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp GTTTGGAGTCGGGAAGCTCCCCGAGAGCAGATAATTTaGGAGAGAGTCAGTGAACACTCTCAAAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VWSREAPREQII*ERVSEHSQKGR
Trigger: TCTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAAATTATCTGCTCTCGGGGAGCTTCCCGACTCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000201528.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp TGTGCACAGCTGGATGGGGCGTTTTCATCCATGACAATGGGAAACAGAAGTTTTATGTTGTCAGAGGTCTaGCTCTGGACCCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: CAQLDGAFSSMTMGNRSFMLSEV*LWTPFT
Trigger: TGTGAAAGGGGTCCAGAGTCAGACCTCTGACAACAT...AAAACTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGACCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: IPQIKQGSRRVTQSLDRGPRPTV*SLCTQG
Trigger: ACCCTGTGTACATAACGAGCAAACAGTGGGACGAGG...TCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTCCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCPVSPD*TDLFLF
Trigger: GAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGG...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATAACGAGCCACCGTTGTaGAGGAAAGTCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNNEPPL*RKVPTA
Trigger: GGCCGTGGGGACTTTCCTGCACAACGGTGGCTCGTT...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTGGCAGGAGCTGGTTGTaGTGCAGCAGCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCGRSWL*CSSTVF
Trigger: GAAGACAGTGCTGCTGCACCACAACCAGCTCCTGCC...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGCACCTGTGTATTTGGGTTTGAGGTACAGTaGATCCTAATGAATTCTCGG +
Preference number: 4 (lower is better)
Translates to: TALEAWAVHACYLSTCVFGFEVQ*ILMNSR
Trigger: CCGAGAATTCATTAGGATGCACTGTACCTCAAACCC...AAATACACAGGTGCTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp ATAGTGAAGGTGATACAGGCTCTTAGTCAACTAAAGCTAATGTCCGCCTATGCAACACGACTGCACTGTTaGGCAAAGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: IVKVIQALSQLKLMSAYATRLHC*AKASRI
Trigger: GATCCTGGATGCCTTTGCCCAACAGTGCAGTCGTGT...TGCATAGGCGGACATTAGCTTTAGTTGACTAAGAGCCTGTATCACCTTCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGGGCAGGAGCTGGTTGTaGTGCAGCAGCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMGRSWL*CSSTVF
Trigger: GAAGACAGTGCTGCTGCACCACAACCAGCTCCTGCC...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTTGCACAGGGAATCTAGAGCACGTGACTTTAACTaGATCCAGAGGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TRSKVVLYVPASLHRESRARDFN*IQRASF
Trigger: GAAAGACGCCCTCTGGATCCAGTTAAAGTCACGTGC...TCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp AGTCTTAGGAAATCGAAGACAGCTTACTTGTTACAGTaGCTCGTCTTCCCTTCGCCCATGTGCAGGAACACT +
Preference number: 4 (lower is better)
Translates to: SLRKSKTAYLLQ*LVFPSPMCRNT
Trigger: AGTGTTCCTGCACATGGGCGAAGGGAAGACGAGCAACTGTAACAAGTAAGCTGTCTTCGATTTCCTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 72 bp TGCGTTCTGGACATAATTCACACCTTCCCAGGAGTTTaGTCCACTTTCTCAGTTGCAGAAGAGGCACAAGTC +
Preference number: 4 (lower is better)
Translates to: CVLDIIHTFPGV*STFSVAEEAQV
Trigger: GACTTGTGCCTCTTCTGCAACTGAGAAAGTGGACAAAACTCCTGGGAAGGTGTGAATTATGTCCAGAACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
3UTR CAA 72 bp CACATTTGCATTAGAGCTGTGACTCAAGCATCCCTTTaGACGTGTTTGCCAAGCAGCTTTGGCAAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: HICIRAVTQASL*TCLPSSFGKCC
Trigger: GCAACACTTGCCAAAGCTGCTTGGCAAACACGTCAAAAGGGATGCTTGAGTCACAGCTCTAATGCAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR GCA 90 bp TCACTGTGTTTACAGAAATACATCATAATGACACACACTGCTGTTGCGACACATTGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLCLQKYIIMTHTAVATHCSTAA*FPRWAA
Trigger: AGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACA...ATGTGTCGCAACAGCAGTGTGTGTCATTATGATGTATTTCTGTAAACACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTACCTCGTCCCACTGTTTaGTCGTTATGTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVPRPTV*SLCTQG
Trigger: ACCCTGTGTACATAACGAGCAAACAGTGGGACGAGG...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp ACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACAGGAAGCAGCACACGACTGCACTGTTaGGCAAAGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TALLIIIIQTLQYSTGSSTRLHC*AKASRI
Trigger: GATCCTGGATGCCTTTGCCCAACAGTGCAGTCGTGT...GCTGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp ACGAGATCCAAAGTTGTCCTTTATGTCCCTGCATCTTaGCACAGGGAATCTAGAAAAGCGGAGGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: TRSKVVLYVPAS*HRESRKAEGTR
Trigger: TCTAGTTCCCTCCGCTTTTCTAGATTCCCTGTGCAAAGATGCAGGGACATAAAGGACAACTTTGGATCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR TCA 90 bp TTGTGCAATTTTACCCCCAACAGAACATGTGGCCTTCTAGAGGTATATGAGGTATTTCCCAAGGCCGCATaGGTACTTAAGCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LCNFTPNRTCGLLEVYEVFPKAA*VLKLIC
Trigger: ACAGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...TACCTCATATACCTCTAGAAGGCCACATGTTCTGTTGGGGGTAAAATTGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGATCTTCATTTTCTTGTTaGAACGAGATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRSSFSC*NEITSC
Trigger: GCAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGA...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ATCAGTAGTCCACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTATGTTCAACAGCTGCTTaGTTCCCTCGGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ISSPLHFLLLSSRPCNTVCSTAA*FPRWAA
Trigger: AGCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACA...TACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGTGGACTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTGCACGTGACTTTAACTaGATCCAGAGGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPARDFN*IQRASF
Trigger: GAAAGACGCCCTCTGGATCCAGTTAAAGTCACGTGC...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp AATGGTGATTCAACAAGAAGAACACAGCCCTTGCAGTCAGCTATGAAGCTTAGATTTGGAGAGAGTCAGTaGACACTCTCAAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NGDSTRRTQPLQSAMKLRFGESQ*TLSKRQ
Trigger: CTGCCTTTTTGAGAGTGTTCACTGACTCTCTCCAAA...TCTAAGCTTCATAGCTGACTGCAAGGGCTGTGTTCTTCTTGTTGAATCACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp ACTGCACTTCTTATTATTATCATCCAGACCTTGCAATACAGTACAGGAAGCAGCTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: TALLIIIIQTLQYSTGSSFPKAA*VLKLIC
Trigger: ACAGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...GCTGCTTCCTGTACTGTATTGCAAGGTCTGGATGATAATAATAAGAAGTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATTCTTCATTTTCTTGTTaGAACGAGATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNSSFSC*NEITSC
Trigger: GCAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGA...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTCCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPPVSPD*TDLFLF
Trigger: GAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGG...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp ACAGAACAGCACATATTCTCTCCCTACACTCCAGTTTaGCTAAATGTGGCCTTCTCTGGCAGCAAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: TEQHIFSPYTPV*LNVAFSGSKEN
Trigger: ATTTTCTTTGCTGCCAGAGAAGGCCACATTTAGCAAAACTGGAGTGTAGGGAGAGAATATGTGCTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
CDS-3UTR TCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNFPKAA*VLKLIC
Trigger: ACAGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAAAGGCAGAAGTTTGTTaGTTTCTTTGCATATATTGC +
Preference number: 4 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRKAEVC*FLCIYC
Trigger: GCAATATATGCAAAGAAAGCAACAAACTTCTGCCTT...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp ATGCTACCCAGAGTTGGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAAAAGGCAGAAGTTTGTTaGTTTCTTTGCATATATTGC +
Preference number: 4 (lower is better)
Translates to: MLPRVGVEIRAFKEVEEEKAEVC*FLCIYC
Trigger: GCAATATATGCAAAGAAAGCAACAAACTTCTGCCTT...TTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACCAACTCTGGGTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATAACACTTTGTTTATCTaGTCCTCCGAGGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNNTLFI*SSEGIH
Trigger: GTGGATGCCCTCGGAGGAGCAGATAAACAAAGTGTT...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR TCA 90 bp GCGTTAGGAACTTATGAAACGAGGCATTGGAAAATGGTTTTCAATCTTTGGATGGACCTACAGCATCGCTaGACACTTTGTTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: ALGTYETRHWKMVFNLWMDLQHR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGATGCTGTAGGTC...CATCCAAAGATTGAAAACCATTTTCCAATGCCTCGTTTCATAAGTTCCTAACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGAAAGGCAGAAGTTTGTTaGTTTCTTTGCATATATTGC +
Preference number: 4 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGKAEVC*FLCIYC
Trigger: GCAATATATGCAAAGAAAGCAACAAACTTCTGCCTT...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR GCA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATTCTTCATTTTCTTGTTaGAACGAGATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNSSFSC*NEITSC
Trigger: GCAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGA...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
3UTR CAA 72 bp AGCTTTTGGTTCCACAAAGAACATAGTAATCTTGATTaGTTTAATAAAGCCAGTGTTCTCCGCAGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SFWFHKEHSNLD*FNKASVLRRSK
Trigger: TTTGGACCTGCGGAGAACACTGGCTTTATTAAACAAATCAAGATTACTATGTTCTTTGTGGAACCAAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169190.5
ENSMUST00000201528.2
ENSMUST00000201705.4
ENSMUST00000201972.2
ENSMUST00000202131.4
CDS-3UTR CAA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATTGCGGCAGGAGCTGGTaGTGGTGCAGCAGCACTGTC +
Preference number: 5 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHCGRSW*WCSSTV
Trigger: GACAGTGCTGCTGCACCACAACCAGCTCCTGCCGCA...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATTTGTTCAACAGCTGCTaGCTTCCCTCGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHLFNSC*LPSVGC
Trigger: GCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAA...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp GTACAGGAAGCAGCGGGTGCCCTCTGCACATCTGAAGCAAGTGGCAAGAACCCTCTAGAGCCTTCCTGCTaGACGCAAGAAATCATGGAT +
Preference number: 5 (lower is better)
Translates to: VQEAAGALCTSEASGKNPLEPSC*TQEIMD
Trigger: ATCCATGATTTCTTGCGTCAAGCAGGAAGGCTCTAG...AGGGTTCTTGCCACTTGCTTCAGATGTGCAGAGGGCACCCGCTGCTTCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp GGTGTTGAGATCAGAGCCTTTAAAGAGGTGGAGGAGGAACTCAGGCCTCTCCATGCCTCGTCCCACTGTTaGCTCGTTATGTACACAGGG +
Preference number: 5 (lower is better)
Translates to: GVEIRAFKEVEEELRPLHASSHC*LVMYTG
Trigger: CCCTGTGTACATAACGAGCAAACAGTGGGACGAGGC...ATGGAGAGGCCTGAGTTCCTCCTCCACCTCTTTAAAGGCTCTGATCTCAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp CAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGGAGGATGTTTGTTCAACAGCTGCTaGCTTCCCTCGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QIKQGSRRVTQSLDRGGCLFNSC*LPSVGC
Trigger: GCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAA...ACATCCTCCTCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGATTGTTCAACAGCTGCTaGCTTCCCTCGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRLFNSC*LPSVGC
Trigger: GCAGCCCACCGAGGGAAGCAAGCAGCTGTTGAACAA...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS CCA 90 bp AGTTTTCCTCCACAGTTTAAGAGACTAAGAACACGACTGCACTGTTaGGCAAAGGCATCCAGGATCATCCGGCTCTCTGCACTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFPPQFKRLRTRLHC*AKASRIIRLSALSS
Trigger: GGAGCTCAGTGCAGAGAGCCGGATGATCCTGGATGCCTTTGCCCAACAGTGCAGTCGTGTTCTTAGTCTCTTAAACTGTGGAGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGCCTCGTCCCACTGTTaGCTCGTTATGTACACAGGG +
Preference number: 5 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRASSHC*LVMYTG
Trigger: CCCTGTGTACATAACGAGCAAACAGTGGGACGAGGC...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp TGTACTTTTGTTGCAATTTGGGGAATGGTGATTCAACAAGAAGAACACAGCCCTTGCGGCAGGAGCTGGTaGTGGTGCAGCAGCACTGTC +
Preference number: 5 (lower is better)
Translates to: CTFVAIWGMVIQQEEHSPCGRSW*WCSSTV
Trigger: GACAGTGCTGCTGCACCACAACCAGCTCCTGCCGCA...AGGGCTGTGTTCTTCTTGTTGAATCACCATTCCCCAAATTGCAACAAAAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp AACAACCCTTTCTCTTGGACAGCCAAAGACACTGGTCTTGGGTCCACTGTAAATGCCTCGTCCCACTGTTaGCTCGTTATGTACACAGGG +
Preference number: 5 (lower is better)
Translates to: NNPFSWTAKDTGLGSTVNASSHC*LVMYTG
Trigger: CCCTGTGTACATAACGAGCAAACAGTGGGACGAGGC...ATTTACAGTGGACCCAAGACCAGTGTCTTTGGCTGTCCAAGAGAAAGGGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp TGCCAGCCCTTTGACAGCTCTGGAGGCCTGGGCTGTACATGCTTGTTACTTAAGGAGCTCTTCATTTTCTaGTTGCAACGAGATAACCTC +
Preference number: 5 (lower is better)
Translates to: CQPFDSSGGLGCTCLLLKELFIF*LQRDNL
Trigger: GAGGTTATCTCGTTGCAACAAGAAAATGAAGAGCTC...CTTAAGTAACAAGCATGTACAGCCCAGGCCTCCAGAGCTGTCAAAGGGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp CGGATTCCACAAATTAAGCAGGGAAGCAGAAGGGTAACTCAGAGCTTAGACCGAGCATCGCTGAACACTTaGTTTATCTGCTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: RIPQIKQGSRRVTQSLDRASLNT*FICSSE
Trigger: CTCGGAGGAGCAGATAAACAAAGTGTTCAGCGATGC...TCGGTCTAAGCTCTGAGTTACCCTTCTGCTTCCCTGCTTAATTTGTGGAATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp TGTGCACAGCTGGATGGGGCGTTTTCATCCATGACAATGGGAAACAGAAGTTTTGCATCGCTGAACACTTaGTTTATCTGCTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: CAQLDGAFSSMTMGNRSFASLNT*FICSSE
Trigger: CTCGGAGGAGCAGATAAACAAAGTGTTCAGCGATGC...AAAACTTCTGTTTCCCATTGTCATGGATGAAAACGCCCCATCCAGCTGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp TGGAATTTTAGACTGATCCACAGGACTGATACTAGTGAATTCGTGTATTCCCGTCTAGAGCCTTCCTGCTaGACGCAAGAAATCATGGAT +
Preference number: 5 (lower is better)
Translates to: WNFRLIHRTDTSEFVYSRLEPSC*TQEIMD
Trigger: ATCCATGATTTCTTGCGTCAAGCAGGAAGGCTCTAG...ACGGGAATACACGAATTCACTAGTATCAGTCCTGTGGATCAGTCTAAAATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201705.4
CDS-3UTR CAA 90 bp GTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATATAGTGTGGGGAGAGCTCTTCATTTTCTaGTTGCAACGAGATAACCTC +
Preference number: 5 (lower is better)
Translates to: VWEFQFSQYFLKSNIVWGELFIF*LQRDNL
Trigger: GAGGTTATCTCGTTGCAACAAGAAAATGAAGAGCTC...TCCCCACACTATATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTCTCTTCATTTTCTTGTaGCAACGAGATAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCLFIFL*QRDNLL
Trigger: CAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGAG...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp TTACATTTCTACAAACCCACATGTGAAAGCTGTCACAGACTAACACAGACCTGTGAGCTCTTCATTTTCTaGTTGCAACGAGATAACCTC +
Preference number: 5 (lower is better)
Translates to: LHFYKPTCESCHRLTQTCELFIF*LQRDNL
Trigger: GAGGTTATCTCGTTGCAACAAGAAAATGAAGAGCTC...ACAGGTCTGTGTTAGTCTGTGACAGCTTTCACATGTGGGTTTGTAGAAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS-3UTR CAA 90 bp GCCAGTAATTTAGTGTGGGAATTCCAGTTCTCCCAGTATTTCCTAAAATCCAATCTCTTCATTTTCTTGTaGCAACGAGATAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: ASNLVWEFQFSQYFLKSNLFIFL*QRDNLL
Trigger: CAGGAGGTTATCTCGTTGCAACAAGAAAATGAAGAG...ATTGGATTTTAGGAAATACTGGGAGAACTGGAATTCCCACACTAAATTACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169190.5
ENSMUST00000201705.4
ENSMUST00000201972.2
CDS TCA 72 bp GCTTGGCCAGCGCCGGCCGCCGGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCCGCGCTGCTTGTAGATGC +
Preference number: 6 (lower is better)
Translates to: AWPAPAAGWGTS*GRCRGRAACRC
Trigger: GCATCTACAAGCAGCGCGGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCCGGCGGCCGGCGCTGGCCAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169190.5
ENSMUST00000201972.2