Pregenerated sensors for BEND3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038214Ensembl transcript IDs: ENSMUST00000040147.8, ENSMUST00000167488.9, ENSMUST00000214116.2, ENSMUST00000216679.2
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCATAAGGTGCCGGTCTGTGGGTACCATCCGAGCTCCTGAGCAATaGTCAGTCCCAAGGGCACCCACTGCTCAGCCTGCGGTGACCCAG | + |
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Preference number: 1 (lower is better) Translates to: GIRCRSVGTIRAPEQ*SVPRAPTAQPAVTQ Trigger: CTGGGTCACCGCAGGCTGAGCAGTGGGTGCCCTTGGGACTGAGCATTGCTCAGGAGCTCGGATGGTACCCACAGACCGGCACCTTATGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR CCA 90 bp | AAGGTCTGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATaGTTTGGGTTCTTCCAACACCTGCAAAAGAGCCCTAGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: KVWWDWEGVWALHLR*FGFFQHLQKSPRLG Trigger: CCCCAGCCTAGGGCTCTTTTGCAGGTGTTGGAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCAGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR GCA 90 bp | GTTTACGTGTGCAAATGTAGGAAACCACTCCCCACTGGCATAAGGTaGCGGTCTGTGGGTACCATCCGAGCTCCTGAGCAATGCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: VYVCKCRKPLPTGIR*RSVGTIRAPEQCSV Trigger: GACTGAGCATTGCTCAGGAGCTCGGATGGTACCCACAGACCGGCACCTTATGCCAGTGGGGAGTGGTTTCCTACATTTGCACACGTAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR TCA 90 bp | GACCAGAACAAATCCCATGGAATTCTCTCCAACCAGTGGAAGCAGTaGGAGAGTGCCACAGCCATCTTTGGGGTAGCGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: DQNKSHGILSNQWKQ*ESATAIFGVACVCV Trigger: CACACACACACACGCTACCCCAAAGATGGCTGTGGCACTCTCTCACTGCTTCCACTGGTTGGAGAGAATTCCATGGGATTTGTTCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR CCA 90 bp | ACTAGGGGTCTCCAGGTCCCTCTGGATCAGGTAGGAAGCAGTTGCTaGGGGGATAGTAGAAACCGAGACAATCTCTACAAGGACCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: TRGLQVPLDQVGSSC*GDSRNRDNLYKDPN Trigger: ATTTGGGTCCTTGTAGAGATTGTCTCGGTTTCTACTATCCCCCCAGCAACTGCTTCCTACCTGATCCAGAGGGACCTGGAGACCCCTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR TCA 90 bp | AACCGAGACAATCTCTACAAGGACCCAAATGGCCACACTGTGGTGTaGTCAGGCCAAATCCAGTCGCCACTAAGTAGATCCCATTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: NRDNLYKDPNGHTVV*SGQIQSPLSRSHWS Trigger: TGACCAATGGGATCTACTTAGTGGCGACTGGATTTGGCCTGATCACACCACAGTGTGGCCATTTGGGTCCTTGTAGAGATTGTCTCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR CCA 90 bp | CTTGGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATaGAATTCTCTCCAACCAGTGGAAGCAGTGAGAGAGTGCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: LGILSVTSSRPEQIP*NSLQPVEAVRECHS Trigger: GCTGTGGCACTCTCTCACTGCTTCCACTGGTTGGAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCCGGCGGCAGACAGGCTaGGCCACCGCAGAACGGAAG | + |
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Preference number: 2 (lower is better) Translates to: WWDWEGVWALHLRWFGFFRRQTG*ATAERK Trigger: CTTCCGTTCTGCGGTGGCCCAGCCTGTCTGCCGCCG...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTGTGTGGAGGGCACAGCTCCCCCAAGGGCACCCACTaGTCAGCCTGCGGTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: TVLQCVPLQQHLCGGHSSPKGTH*SACGDP Trigger: TGGGTCACCGCAGGCTGAGCAGTGGGTGCCCTTGGG...GGAGCTGTGCCCTCCACACAGATGTTGCTGTAGAGGGACACATTGCAACACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTAACTCCAGTGGCCTCTaGCTAGAGGGTGGGCTACCA | + |
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Preference number: 2 (lower is better) Translates to: EEIRTSMLGVGQGRLAELNSSGL*LEGGLP Trigger: TGGTAGCCCACCCTCTAGGCAGAGGCCACTGGAGTT...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACCCTACACACTGTGTTaGAATGTGTCCCTCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: GEEIRTSMLGVGQGRLAEPYTLC*NVSLYS Trigger: GCTGTAGAGGGACACATTGCAACACAGTGTGTAGGG...TTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTAAAAGAGCCCTAGGCTaGGGCTTTGGAGGTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: EEIRTSMLGVGQGRLAELKRALG*GFGGSR Trigger: TCTTGAACCTCCAAAGCCCCAGCCTAGGGCTCTTTT...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTACCCTACCAATTCTCTaGTTTCACAGCTTGGCTACC | + |
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Preference number: 2 (lower is better) Translates to: EEIRTSMLGVGQGRLAELTLPIL*FHSLAT Trigger: GGTAGCCAAGCTGTGAAATCAGAGAATTGGTAGGGT...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATACCCACTGCTCAGCCTaGGGTGACCCAGGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHTHCSA*GDPGPW Trigger: CCAGGGACCTGGGTCACCGCAGGCTGAGCAGTGGGT...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCGGCCGATTGTGCTTCTaGTGTTGCAGGGCCACACTC | + |
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Preference number: 2 (lower is better) Translates to: TCKNSMADCASDVAGPHSGRLCF*CCRATL Trigger: GAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCC...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGCGGCGGCAGACAGGCTaGGCCACCGCAGAACGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPRRQTG*ATAERK Trigger: CTTCCGTTCTGCGGTGGCCCAGCCTGTCTGCCGCCG...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCAAAAGAGCCCTAGGCTaGGGCTTTGGAGGTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: WWDWEGVWALHLRWFGFFKRALG*GFGGSR Trigger: TCTTGAACCTCCAAAGCCCCAGCCTAGGGCTCTTTT...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAACCCAAGGGCACCCACTaGTCAGCCTGCGGTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: VNIRISGLIFSPLDTRQKPKGTH*SACGDP Trigger: TGGGTCACCGCAGGCTGAGCAGTGGGTGCCCTTGGG...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCGGGGACTCTTCTGGCTaGCCATTACCTTCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TCKNSMADCASDVAGPHSGDSSG*PLPSSW Trigger: CCAGGAAGAAGGTAATGGGCAGCCAGAAGAGTCCCC...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCATTGAGGGAAAAGGTCTaGTGGGACTGGGAAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: DGTCKNSMADCASDVAGPLREKV*WDWEGV Trigger: CACCCCTTCCCAGTCCCACCAGACCTTTTCCCTCAA...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACTCATTGTTCAGCCCTaGCTGGGCTGGAATTCACTC | + |
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Preference number: 2 (lower is better) Translates to: DGTCKNSMADCASDVAGPLIVQP*LGWNSL Trigger: GAGTGAATTCCAGCCCAGTCAGGGCTGAACAATGAG...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTGTTACCCATAATGCCTaGATATGGCATTTCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: EEIRTSMLGVGQGRLAELVTHNA*IWHFFF Trigger: AAAGAAGAAATGCCATATTCAGGCATTATGGGTAAC...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCCGTCTGCTGAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAAACTCCAGTGGCCTCTaGCTAGAGGGTGGGCTACCA | + |
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Preference number: 2 (lower is better) Translates to: IPSAESKGVYGLFQNQISNSSGL*LEGGLP Trigger: TGGTAGCCCACCCTCTAGGCAGAGGCCACTGGAGTT...TGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTCAGCAGACGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGTCCTTCTTAGGCATCTaGCCCCAGTGCAGAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLSFLGI*PQCRRG Trigger: TCCCCTTCTGCACTGGGGCCAGATGCCTAAGAAGGA...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGACTTCCTGCAAGGTTTaGGGGAAAAGGTCTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLTSCKV*GKRSGG Trigger: CCCACCAGACCTTTTCCCTCAAACCTTGCAGGAAGT...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACACCCACTGCTCAGCCTaGGGTGACCCAGGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NMRREKQVATFAFSCFSDTHCSA*GDPGPW Trigger: CCAGGGACCTGGGTCACCGCAGGCTGAGCAGTGGGT...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGGGTTCTTCCAACACCTaGAAAAGAGCCCTAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLGSSNT*KRALGW Trigger: CCAGCCTAGGGCTCTTTTGCAGGTGTTGGAAGAACC...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCGACTGGGAAGGGGTGTaGGCACTCCATTTAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: GILSVTSSRPEQIPWNSLDWEGV*ALHLRW Trigger: CCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTC...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGCAGGACAATTTTCACATGGCTTGGAATCCTCTCGGTTACATCCTCAAGGAGGTTCAAGACCATaGGAGGAGCTAACACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WKAGQFSHGLESSRLHPQGGSRP*EELTLR Trigger: CCTCAGTGTTAGCTCCTCCCATGGTCTTGAACCTCC...TTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACTTGAGGGAAAAGGTCTaGTGGGACTGGGAAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHLREKV*WDWEGV Trigger: CACCCCTTCCCAGTCCCACCAGACCTTTTCCCTCAA...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTGTGTGGAGGGCACAGCTCCAGAAGATGTAAAACATaGGGAGAGAGAAACAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: TVLQCVPLQQHLCGGHSSRRCKT*GERNKL Trigger: CAACTTGTTTCTCTCTCCTCATGTTTTACATCTTCT...GGAGCTGTGCCCTCCACACAGATGTTGCTGTAGAGGGACACATTGCAACACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTGGCCGATTGTGCTTCTaGTGTTGCAGGGCCACACTC | + |
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Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAGRLCF*CCRATL Trigger: GAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCC...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACGAAGCAGTGAGAGAGTaGCACAGCCATCTTTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHEAVRE*HSHLWG Trigger: ACCCCAAAGATGGCTGTGGCACTCTCTCACTGCTTC...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAACTCATTGTTCAGCCCTaGCTGGGCTGGAATTCACTC | + |
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Preference number: 2 (lower is better) Translates to: VNIRISGLIFSPLDTRQKLIVQP*LGWNSL Trigger: GAGTGAATTCCAGCCCAGTCAGGGCTGAACAATGAG...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAAGGTTCTTCCAACACCTaGAAAAGAGCCCTAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VNIRISGLIFSPLDTRQKGSSNT*KRALGW Trigger: CCAGCCTAGGGCTCTTTTGCAGGTGTTGGAAGAACC...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTACAGCAACATCTGTGTaGAGGGCACAGCTCCCACGA | + |
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Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTATATSV*RAQLPR Trigger: TCGTGGGAGCTGTGCCCTCCACACAGATGTTGCTGT...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTCCTAGGCTGGGGCTTTaGAGGTTCAAGACCATGGGA | + |
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Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAPRLGL*RFKTMG Trigger: TCCCATGGTCTTGAACCTCCAAAGCCCCAGCCTAGG...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTTCCTTCTTAGGCATCTaGCCCCAGTGCAGAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTASFLGI*PQCRRG Trigger: TCCCCTTCTGCACTGGGGCCAGATGCCTAAGAAGGA...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACCAAATGGCCACACTGTaGTGTGATCAGGCCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHQMATL*CDQAKS Trigger: GGATTTGGCCTGATCACACCACAGTGTGGCCATTTG...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR TCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACTACCATCCGAGCTCCTaGGCAATGCTCAGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: NMRREKQVATFAFSCFSDYHPSS*AMLSPK Trigger: CTTGGGACTGAGCATTGCTCAGGAGCTCGGATGGTA...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCAAATTTTCACATGGCTTaGAATCCTCTCGGTTACATC | + |
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Preference number: 2 (lower is better) Translates to: DGTCKNSMADCASDVAGPNFHMA*NPLGYI Trigger: GATGTAACCGAGAGGATTCCAAGCCATGTGAAAATT...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACTTGTAAAAACTCAATaGCCGATTGTGCTTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: DGTCKNSMADCASDVAGPLVKTQ*PIVLLM Trigger: CATCAGAAGCACAATCGGCCATTGAGTTTTTACAAG...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTTTGTTCAGCCCTGACTaGGCTGGAATTCACTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTALFSPD*AGIHSA Trigger: TGCAGAGTGAATTCCAGCCCAGTCAGGGCTGAACAA...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCTGCCCATTGGGTACATaGAAAATTATATCATGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GILSVTSSRPEQIPWNSLCPLGT*KIISCG Trigger: ACCACATGATATAATTTTGCATGTACCCAATGGGCA...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACTTGTTCAGCCCTGACTaGGCTGGAATTCACTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NMRREKQVATFAFSCFSDLFSPD*AGIHSA Trigger: TGCAGAGTGAATTCCAGCCCAGTCAGGGCTGAACAA...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGCCAGAACAAATCCCATaGAATTCTCTCCAACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPPEQIP*NSLQPV Trigger: CACTGGTTGGAGAGAATTCCATGGGATTTGTTCTGG...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR TCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACACCCTACCAATTCTCTaGTTTCACAGCTTGGCTACC | + |
|
Preference number: 2 (lower is better) Translates to: NMRREKQVATFAFSCFSDTLPIL*FHSLAT Trigger: GGTAGCCAAGCTGTGAAATCAGAGAATTGGTAGGGT...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAAGCAGGACAATTTTCACATGGCTTGGAATCCTCTCGGTTACATCCTCAAGAGAGAGAAACAAGTTaGTACGTTTGCATTTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: WKAGQFSHGLESSRLHPQERETS*YVCIFL Trigger: CAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTC...TTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTCCAGAACAAATCCCATaGAATTCTCTCCAACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAPEQIP*NSLQPV Trigger: CACTGGTTGGAGAGAATTCCATGGGATTTGTTCTGG...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACCTTGTAAAAACTCAATaGCCGATTGTGCTTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHLVKTQ*PIVLLM Trigger: CATCAGAAGCACAATCGGCCATTGAGTTTTTACAAG...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR TCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGAGAAGATGTAAAACATaGGGAGAGAGAAACAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPRRCKT*GERNKL Trigger: CAACTTGTTTCTCTCTCCTCATGTTTTACATCTTCT...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTCACTACCACCTACTGTaGCATACTATTTTAGTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAHYHLL*HTILVN Trigger: GTTCACTAAAATAGTATGTCACAGTAGGTGGTAGTG...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTGTTACCCATAATGCCTaGATATGGCATTTCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAVTHNA*IWHFFF Trigger: AAAGAAGAAATGCCATATTCAGGCATTATGGGTAAC...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR GCA 90 bp | GCATTGAAAATTGAATGCCCATTGGGTACATGCAAAATTATATCATGTGGTCTAGTAGGTGTTTACGTGTaGAAATGTAGGAAACCACTC | + |
|
Preference number: 2 (lower is better) Translates to: ALKIECPLGTCKIISCGLVGVYV*KCRKPL Trigger: GAGTGGTTTCCTACATTTGCACACGTAAACACCTAC...TAGACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR TCA 72 bp | CATAAGGTGCCGGTCTGTGGGTACCATCCGAGCTCCTaGGCAATGCTCAGTCCCAAGGGCACCCACTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HKVPVCGYHPSS*AMLSPKGTHCS Trigger: TGAGCAGTGGGTGCCCTTGGGACTGAGCATTGCTCAGGAGCTCGGATGGTACCCACAGACCGGCACCTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | GAAGGGGACTCTTCTGGCTGCCCATTACCTTCTTCCTaGGCACAAGAAGGTTGCCTTGTTCTCCGCGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGDSSGCPLPSS*AQEGCLVLRGA Trigger: GGCCCCGCGGAGAACAAGGCAACCTTCTTGTGCCCAGGAAGAAGGTAATGGGCAGCCAGAAGAGTCCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGCCAGGGTAGGCTGGCAGAACTTCCTGCAAGGTTTGAGGGAAAAGGTCTGTCAGACAGGGTCTCATaGTTCAGCCCTGACTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VGQGRLAELPARFEGKGLSDRVS*FSPDWA Trigger: AGCCCAGTCAGGGCTGAACAATGAGACCCTGTCTGA...CAGACCTTTTCCCTCAAACCTTGCAGGAAGTTCTGCCAGCCTACCCTGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR GCA 72 bp | CCCCGGGCAACTCAGTCTTCTAGGTCGGGGATGCGATaGACTGAGTTTGGGAAACACGGTCTCCTTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRATQSSRSGMR*TEFGKHGLLSF Trigger: GAAGGAAAGGAGACCGTGTTTCCCAAACTCAGTGCATCGCATCCCCGACCTAGAAGACTGAGTTGCCCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAATTCAAGGCTTCTTTCTaGTGGCTGGGTAGGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GEEIRTSMLGVGQGRLAEFKASF*WLGRCL Trigger: TAAACACCTACCCAGCCACAAGAAAGAAGCCTTGAA...TTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR GCA 72 bp | TGCAAATGTAGGAAACCACTCCCCACTGGCATAAGGTaGCGGTCTGTGGGTACCATCCGAGCTCCTGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CKCRKPLPTGIR*RSVGTIRAPEQ Trigger: TTGCTCAGGAGCTCGGATGGTACCCACAGACCGGCACCTTATGCCAGTGGGGAGTGGTTTCCTACATTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | TTGGGTTCTTCCAACACCTGCAAAAGAGCCCTAGGCTaGGGCTTTGGAGGTTCAAGACCATGGGAGGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LGSSNTCKRALG*GFGGSRPWEEL Trigger: TAGCTCCTCCCATGGTCTTGAACCTCCAAAGCCCCAGCCTAGGGCTCTTTTGCAGGTGTTGGAAGAACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | TGGCAGAACTTCCTGCAAGGTTTGAGGGAAAAGGTCTaGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: WQNFLQGLREKV*WDWEGVWALHL Trigger: TAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCAGACCTTTTCCCTCAAACCTTGCAGGAAGTTCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | TTTGGGAAACACGGTCTCCTTTCCTTCTTAGGCATCTaGCCCCAGTGCAGAAGGGGAAGAGATACGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FGKHGLLSFLGI*PQCRRGRDTHL Trigger: GAGGTGCGTATCTCTTCCCCTTCTGCACTGGGGCCAGATGCCTAAGAAGGAAAGGAGACCGTGTTTCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR GCA 72 bp | TGGAATTCTCTCCAACCAGTGGAAGCAGTGAGAGAGTaGCACAGCCATCTTTGGGGTAGCGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WNSLQPVEAVRE*HSHLWGSVCVC Trigger: ACACACACACACGCTACCCCAAAGATGGCTGTGGCACTCTCTCACTGCTTCCACTGGTTGGAGAGAATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | TGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATaGTTTGGGTTCTTCCAACACCTGCAAAAGAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WDWEGVWALHLR*FGFFQHLQKSP Trigger: AGGGCTCTTTTGCAGGTGTTGGAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | CTCCAGGTCCCTCTGGATCAGGTAGGAAGCAGTTGCTaGGGGGATAGTAGAAACCGAGACAATCTCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQVPLDQVGSSC*GDSRNRDNLYK Trigger: CTTGTAGAGATTGTCTCGGTTTCTACTATCCCCCCAGCAACTGCTTCCTACCTGATCCAGAGGGACCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR TCA 72 bp | AAATCCCATGGAATTCTCTCCAACCAGTGGAAGCAGTaGGAGAGTGCCACAGCCATCTTTGGGGTAGCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KSHGILSNQWKQ*ESATAIFGVAC Trigger: ACACGCTACCCCAAAGATGGCTGTGGCACTCTCTCACTGCTTCCACTGGTTGGAGAGAATTCCATGGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | TTGAGGGAAAAGGTCTGGTGGGACTGGGAAGGGGTGTaGGCACTCCATTTAAGATGGTTTGGGTTCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LREKVWWDWEGV*ALHLRWFGFFQ Trigger: TTGGAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCAGACCTTTTCCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | TTCCTGCAAGGTTTGAGGGAAAAGGTCTGGTGGGACTaGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FLQGLREKVWWD*EGVWALHLRWF Trigger: AAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCAGACCTTTTCCCTCAAACCTTGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCTTCAAGGCTTCTTTCTaGTGGCTGGGTAGGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GWNSLCRLTRLASNSSGLFKASF*WLGRCL Trigger: TAAACACCTACCCAGCCACAAGAAAGAAGCCTTGAA...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCATTGTGCTTCTGATGTaGCAGGGCCACACTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: TCKNSMADCASDVAGPHSIVLLM*QGHTPL Trigger: AAGTGGAGTGTGGCCCTGCAACATCAGAAGCACAAT...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | CTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATaGAATTCTCTCCAACCAGTGGAAGCAGTGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSVTSSRPEQIP*NSLQPVEAVRE Trigger: CTCTCTCACTGCTTCCACTGGTTGGAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACTCAGACAGGGTCTCATaGTTCAGCCCTGACTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHSDRVS*FSPDWA Trigger: AGCCCAGTCAGGGCTGAACAATGAGACCCTGTCTGA...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCTACGTTTGCATTTTCTaGTTTTTCAGACAGGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: WWDWEGVWALHLRWFGFFYVCIF*FFRQGL Trigger: GAGACCCTGTCTGAAAAACAAGAAAATGCAAACGTA...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | ACTGGCCTCAAACTCCAGTGGCCTCTGCCTAGAGGGTaGGCTACCACATCTAGTCTAAATTTGAATTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TGLKLQWPLPRG*ATTSSLNLNFE Trigger: TTCAAAATTCAAATTTAGACTAGATGTGGTAGCCCACCCTCTAGGCAGAGGCCACTGGAGTTTGAGGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGCAGGACAATTTTCACATGGCTTGGAATCCTCTCGGTTACATCCTCAACTGGGGACACGGACTTaGTACAAATACATGGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WKAGQFSHGLESSRLHPQLGTRT*YKYMGS Trigger: ACTTCCCATGTATTTGTACAAAGTCCGTGTCCCCAG...TTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | CCACTTTCTGGAAAGCAGGACAATTTTCACATGGCTTaGAATCCTCTCGGTTACATCCTCAAGACCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PLSGKQDNFHMA*NPLGYILKTRT Trigger: TGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCAGAAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CCA 72 bp | AAACCAAAATACAGGTTCCCAGAATTTAACACACTCTaGGTTACAAAAAGTCCCGCTCAGTTCCTAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KPKYRFPEFNTL*VTKSPAQFLEP Trigger: GGGCTCTAGGAACTGAGCGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTCTGGGGACACGGACTTaGTACAAATACATGGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AGFEHCTFKSIFRHSLTALGTRT*YKYMGS Trigger: ACTTCCCATGTATTTGTACAAAGTCCGTGTCCCCAG...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR GCA 72 bp | ACAGAGGACAGAAGCTTTATAGCATTGAAAATTGAATaGCCATTGGGTACATGCAAAATTATATCATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TEDRSFIALKIE*PLGTCKIISCG Trigger: ACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGCTATAAAGCTTCTGTCCTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR TCA 72 bp | AATGACAGAGGACAGAAGCTTTATAGCATTGAAAATTaGATGCCCATTGGGTACATGCAAAATTATATCATG | + |
|
Preference number: 3 (lower is better) Translates to: NDRGQKLYSIEN*MPIGYMQNYIM Trigger: CATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGCTATAAAGCTTCTGTCCTCTGTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTTACTCGGGCGGGGGCTaGAACTTGGCCACCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EEIRTSMLGVGQGRLAELYSGGG*NLATSS Trigger: CGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGAGTA...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTCCAGCCAGATCTTCTTaGAGCGCCGGCCAGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEIRTSMLGVGQGRLAELPARSS*SAGQAA Trigger: AGCGGCCTGGCCGGCGCTCCAAGAAGATCTGGCTGG...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAAACCTGGCCGCCTGGCTaGCTGTCTTCCATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEEIRTSMLGVGQGRLAETWPPG*LSSISL Trigger: GAGAGAAATGGAAGACAGCCAGCCAGGCGGCCAGGT...TTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGCCAGGGTAGGCTGGCAGAACTTCCTGCAAGGTTTGAGGGAAAAGGTCTGCCAGCCAGATCTTCTTaGAGCGCCGGCCAGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGQGRLAELPARFEGKGLPARSS*SAGQAA Trigger: AGCGGCCTGGCCGGCGCTCCAAGAAGATCTGGCTGG...CAGACCTTTTCCCTCAAACCTTGCAGGAAGTTCTGCCAGCCTACCCTGGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCGCTGCTCCGTGTCCCTaGGCCGACAGCGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WWDWEGVWALHLRWFGFFAAPCP*ADSARP Trigger: TGGACGAGCGCTGTCGGCGCAGGGACACGGAGCAGC...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCGCGGGGGCTGGAACTTaGCCACCAGCTCGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WWDWEGVWALHLRWFGFFAGAGT*PPARKG Trigger: GCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGC...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CAA 72 bp | TGGGCCAGGGTAGGCTGGCAGAACTTCCTGCAAGGTTaGAGGGAAAAGGTCTGGTGGGACTGGGAAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WARVGWQNFLQG*REKVWWDWEGV Trigger: CACCCCTTCCCAGTCCCACCAGACCTTTTCCCTCAAACCTTGCAGGAAGTTCTGCCAGCCTACCCTGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCCACAGCTTCCACTCCTaGCCCTGCTGGCAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GWNSLCRLTRLASNSSGLHSFHS*PCWQAL Trigger: GAGAGCCTGCCAGCAGGGGCAGGAGTGGAAGCTGTG...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCCAGGGTAGGCTGGCAGAACTTCCTGCAAGGTTTGAGGGAAAAGGTCTGCCGCTGCAGTTGTACTaGTTGCGCAGGTTCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGQGRLAELPARFEGKGLPLQLY*LRRFSW Trigger: CCACGAGAACCTGCGCAAGCAGTACAACTGCAGCGG...CAGACCTTTTCCCTCAAACCTTGCAGGAAGTTCTGCCAGCCTACCCTGGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTCAGGCACATGGACCTTaGGTTGCTGCTGGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EEIRTSMLGVGQGRLAELQAHGP*VAAGRI Trigger: GATCCTACCAGCAGCAACGCAAGGTCCATGTGCCTG...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCGCAGGTTCTCGTGGGTaGAGAGCTCCGGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWNSLCRLTRLASNSSGLAGSRG*RAPGRG Trigger: ACCTCTTCCCGGAGCTCTTCACCCACGAGAACCTGC...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR TCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCGCAGGTTCTCGTGGGTaGAGAGCTCCGGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WWDWEGVWALHLRWFGFFAGSRG*RAPGRG Trigger: ACCTCTTCCCGGAGCTCTTCACCCACGAGAACCTGC...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTAGCTCTGGGAAGAGCTaGAAAAGGAGTCGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEIRTSMLGVGQGRLAELSSGKS*KRSRQA Trigger: AGCCTGTCGACTCCTTTTGCAGCTCTTCCCAGAGCT...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGGTGCCTCACCCTCGCTaGCTCCCTCCAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLVPHPR*LPPAPG Trigger: GCCTGGGGCTGGAGGGAGGCAGCGAGGGTGAGGCAC...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCAGCGCTCGTCCAGCTTaGCTACGAACTCCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WWDWEGVWALHLRWFGFFSARPA*LRTPGS Trigger: GGACCCTGGAGTTCGTAGGCAAGCTGGACGAGCGCT...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCGGTGACCTGGCCGCCTaGCTGGCTGTCTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GWNSLCRLTRLASNSSGLGDLAA*LAVFHF Trigger: GAAATGGAAGACAGCCAGCCAGGCGGCCAGGTCACC...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCAGAAGTCCACGTCGCTaGAGAGCTCTGGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWNSLCRLTRLASNSSGLRSPRR*RALGRA Trigger: AGCTCTTCCCAGAGCTCTTCAGCGACGTGGACTTCT...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCAACTGTTCTCACGGGTaGGCATGCCGGCCAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TCKNSMADCASDVAGPHSNCSHG*ACRPGA Trigger: CGCTCCTGGCCGGCATGCGCACCCGTGAGAACAGTT...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCAAACTGTTCTCACGGGTaGGCATGCCGGCCAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DGTCKNSMADCASDVAGPNCSHG*ACRPGA Trigger: CGCTCCTGGCCGGCATGCGCACCCGTGAGAACAGTT...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTGCCGCTACTGGAGTTTaGCTTCTCAAAGAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: EEIRTSMLGVGQGRLAELAATGV*LLKELI Trigger: TATGAGCTCTTTGAGAAGGCAAACTCCAGTAGCGGC...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCGGGACAGAGTCTGGCTaGCCGTCGCTGTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GILSVTSSRPEQIPWNSLGTESG*PSLSSC Trigger: GCAGCTGGACAGCGACGGCCAGCCAGACTCTGTCCC...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCTACTCGGGCGGGGGCTaGAACTTGGCCACCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GILSVTSSRPEQIPWNSLYSGGG*NLATSS Trigger: CGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGAGTA...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGCACCGGAAAGTCAGGTaGGGGGACCACCAGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLHRKVR*GDHQLV Trigger: GACGAGCTGGTGGTCCCCTCACCTGACTTTCCGGTG...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATCACAGCTTCCACTCCTaGCCCTGCTGGCAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHHSFHS*PCWQAL Trigger: GAGAGCCTGCCAGCAGGGGCAGGAGTGGAAGCTGTG...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | GAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGACACAGGATTAGTGCCTCACCCTCGCTaGCTCCCTCCAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVYGLFQNQISDTGLVPHPR*LPPAPG Trigger: GCCTGGGGCTGGAGGGAGGCAGCGAGGGTGAGGCAC...TAATCCTGTGTCTGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATACTGGGGACAGAGTCTaGCTGGCCGTCGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHTGDRV*LAVAVQ Trigger: CTGGACAGCGACGGCCAGCCAGACTCTGTCCCCAGT...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGACTGGGGACAGAGTCTaGCTGGCCGTCGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLTGDRV*LAVAVQ Trigger: CTGGACAGCGACGGCCAGCCAGACTCTGTCCCCAGT...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACTTGACAGAGCTTCTTCTTaGTCCTTGTTGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEIRTSMLGVGQGRLAELDRASS*SLLSRK Trigger: CTTTCTGGACAACAAGGACCAAGAAGAAGCTCTGTC...AAGTTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CCA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCCACCGAGATGTCGTCTaGCAGGCTAGAGGAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GWNSLCRLTRLASNSSGLHRDVV*QARGVI Trigger: TATGACTCCTCTAGCCTGCCAGACGACATCTCGGTG...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCGTCTGCTGAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGGCTCACCTGCTTCTTaGCACGGCTCACCTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSAESKGVYGLFQNQISGSPAS*HGSPRG Trigger: CCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCC...TGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTCAGCAGACGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACGCTGTCCAGCTGCTTaGGCTTGCTGGAATCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGTCKNSMADCASDVAGPRCPAA*ACWNRG Trigger: TCCACGATTCCAGCAAGCGCAAGCAGCTGGACAGCG...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCAACCGACAGGCTCTGCTaGACGATCTCACGAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGTCKNSMADCASDVAGPTDRLC*TISRTS Trigger: GGAGGTTCGTGAGATCGTGCAGCAGAGCCTGTCGGT...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAAGCGGGGGCTGGAACTTaGCCACCAGCTCGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VNIRISGLIFSPLDTRQKAGAGT*PPARKG Trigger: GCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGC...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCGGAAGGTTCCTCTTCTaGAGGCCATGCACAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TCKNSMADCASDVAGPHSGRFLF*RPCTAS Trigger: GGAAGCTGTGCATGGCCTGCAGAAGAGGAACCTTCC...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTGTGTGGAGGGCACAGCTCCACAGCAGGTCCATCTTaGTGTGAAGCTGGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLQCVPLQQHLCGGHSSTAGPS*CEAGTY Trigger: ATATGTCCCAGCTTCACAGCAAGATGGACCTGCTGT...GGAGCTGTGCCCTCCACACAGATGTTGCTGTAGAGGGACACATTGCAACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGTGCGCAGCTGCTCCTTaGTCAGAAGGCAGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLCAAAP*SEGSLS Trigger: GCTCAGACTGCCTTCTGAGCAAGGAGCAGCTGCGCA...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | TGGAAAGCAGGACAATTTTCACATGGCTTGGAATCCTCTCGGTTACATCCTCAAAGCGCTCGTCCAGCTTaGCTACGAACTCCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKAGQFSHGLESSRLHPQSARPA*LRTPGS Trigger: GGACCCTGGAGTTCGTAGGCAAGCTGGACGAGCGCT...TTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTGTGTGGAGGGCACAGCTCCTGCAAAAGTCTTTGCTaGTCCTTTCAGGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLQCVPLQQHLCGGHSSCKSLC*SFQEAE Trigger: CTCTGCCTCCTGAAAGGAGCAGCAAAGACTTTTGCA...GGAGCTGTGCCCTCCACACAGATGTTGCTGTAGAGGGACACATTGCAACACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCACCGACAGGCTCTGCTaGACGATCTCACGAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GILSVTSSRPEQIPWNSLTDRLC*TISRTS Trigger: GGAGGTTCGTGAGATCGTGCAGCAGAGCCTGTCGGT...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATCCGGAGTGGTTGTACTaGAGTCGGAGGTTCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHPEWLY*SRRFSV Trigger: GACCGAGAACCTCCGACTGCAGTACAACCACTCCGG...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTCGTGGGGTCCAGCTaGTTCTTGTTACAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHLVGSS*FLLQAP Trigger: CGGGGCTTGTAACAAGAAGCAGCTGGACCCCACGAG...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACCGCTTGCTGGAATCGTaGAGGGCGGTGAGGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHRLLES*RAVRTL Trigger: GAGCGTCCTCACCGCCCTCCACGATTCCAGCAAGCG...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATACCTGGCCGCCTGGCTaGCTGTCTTCCATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHTWPPG*LSSISL Trigger: GAGAGAAATGGAAGACAGCCAGCCAGGCGGCCAGGT...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCGTCTGCTGAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGGTGACCTGGCCGCCTaGCTGGCTGTCTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSAESKGVYGLFQNQISGDLAA*LAVFHF Trigger: GAAATGGAAGACAGCCAGCCAGGCGGCCAGGTCACC...TGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTCAGCAGACGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATCATCTAGGAACTCGGTaGGGTCCTGAGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHHLGTR*GPECPP Trigger: TGGTGGACACTCAGGACCTCACCGAGTTCCTAGATG...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGCAGGCACATGGACCTTaGGTTGCTGCTGGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLQAHGP*VAAGRI Trigger: GATCCTACCAGCAGCAACGCAAGGTCCATGTGCCTG...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCCGTCCAAGGGTATTTTaGAAAAGTCTTTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WWDWEGVWALHLRWFGFFRPRVF*KSLCCS Trigger: GGAGCAGCAAAGACTTTTGCAAAATACCCTTGGACG...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | CACACAAAACTGTCCCTACACACTGTGTTGCAATGTGTCCCTCTACAGCAACATACTCTAACTTCCGCTTaGCGGCAAAGCCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTKLSLHTVLQCVPLQQHTLTSA*RQSHRH Trigger: GTGCCTGTGGCTTTGCCGCCAAGCGGAAGTTAGAGT...ATGTTGCTGTAGAGGGACACATTGCAACACAGTGTGTAGGGACAGTTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTCACAAAGTCTCTGCGCACTTCTCAATGTCAATAATTTAGGTGCTTCTGAGACTCACTaGGCAGGCGCAGGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVSQSLCALLNVNNLGASETH*AGAGEK Trigger: CTTCTCCCCTGCGCCTGCTCAGTGAGTCTCAGAAGC...ACCTAAATTATTGACATTGAGAAGTGCGCAGAGACTTTGTGACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040147.8 |
||
| CDS-3UTR TCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAAGCTTCTGAGACTCACTaGGCAGGCGCAGGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNIRISGLIFSPLDTRQKASETH*AGAGEK Trigger: CTTCTCCCCTGCGCCTGCTCAGTGAGTCTCAGAAGC...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTGGCTCACCTGCTTCTTaGCACGGCTCACCTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAGSPAS*HGSPRG Trigger: CCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCC...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACTGCGCAGCTGCTCCTTaGTCAGAAGGCAGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHCAAAP*SEGSLS Trigger: GCTCAGACTGCCTTCTGAGCAAGGAGCAGCTGCGCA...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GATGTAAAACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTGCTGCTCCGTGTCCCTaGGCCGACAGCGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVKHEERETSCYVCIFLFAAPCP*ADSARP Trigger: TGGACGAGCGCTGTCGGCGCAGGGACACGGAGCAGC...AAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTTTTACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACCCGGAGTGGTTGTACTaGAGTCGGAGGTTCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHPEWLY*SRRFSV Trigger: GACCGAGAACCTCCGACTGCAGTACAACCACTCCGG...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTGCTTCTCGGAGGCCCTaGAGTTCCGGGAGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAASRRP*SSGSSP Trigger: TGGACTGCTCCCGGAACTCCAGGGCCTCCGAGAAGC...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCGAGAAGGGCCGCTACTaGAGTTTGCCTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCKNSMADCASDVAGPHSEKGRY*SLPSQR Trigger: TCTTTGAGAAGGCAAACTCCAGTAGCGGCCCTTCTC...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCTTGTTGTCCAGAAAGTaGCCGGCATCCACTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCKNSMADCASDVAGPHSLLSRK*PASTWS Trigger: AGACCAAGTGGATGCCGGCCACTTTCTGGACAACAA...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAACGCTGTCCAGCTGCTTaGGCTTGCTGGAATCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNIRISGLIFSPLDTRQKRCPAA*ACWNRG Trigger: TCCACGATTCCAGCAAGCGCAAGCAGCTGGACAGCG...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGTTCCACTCCTGCCCCTaGTGGCAGGCTCTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPFHSCP*WQALHF Trigger: GAAATGGAGAGCCTGCCAGCAGGGGCAGGAGTGGAA...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACGCTTCTCGGAGGCCCTaGAGTTCCGGGAGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NMRREKQVATFAFSCFSDASRRP*SSGSSP Trigger: TGGACTGCTCCCGGAACTCCAGGGCCTCCGAGAAGC...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAACATCTAGGAACTCGGTaGGGTCCTGAGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VNIRISGLIFSPLDTRQKHLGTR*GPECPP Trigger: TGGTGGACACTCAGGACCTCACCGAGTTCCTAGATG...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GCATTGAAAATTGAATGCCCATTGGGTACATGCAAAATTATATCATGTGGTCTACACCGGAAAGTCAGGTaGGGGGACCACCAGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALKIECPLGTCKIISCGLHRKVR*GDHQLV Trigger: GACGAGCTGGTGGTCCCCTCACCTGACTTTCCGGTG...TAGACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGGGAAGGTTCCTCTTCTaGAGGCCATGCACAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPGRFLF*RPCTAS Trigger: GGAAGCTGTGCATGGCCTGCAGAAGAGGAACCTTCC...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTCCGCTGCAGTTGTACTaGTTGCGCAGGTTCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFEHCTFKSIFRHSLTAPLQLY*LRRFSW Trigger: CCACGAGAACCTGCGCAAGCAGTACAACTGCAGCGG...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTCTCGTGGGGTCCAGCTaGTTCTTGTTACAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGFEHCTFKSIFRHSLTALVGSS*FLLQAP Trigger: CGGGGCTTGTAACAAGAAGCAGCTGGACCCCACGAG...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GCATTGAAAATTGAATGCCCATTGGGTACATGCAAAATTATATCATGTGGTCTACGCTTGCTGGAATCGTaGAGGGCGGTGAGGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALKIECPLGTCKIISCGLRLLES*RAVRTL Trigger: GAGCGTCCTCACCGCCCTCCACGATTCCAGCAAGCG...TAGACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGACTCTAACTTCCGCTTaGCGGCAAAGCCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPTLTSA*RQSHRH Trigger: GTGCCTGTGGCTTTGCCGCCAAGCGGAAGTTAGAGT...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGCAGGACAATTTTCACATGGCTTGGAATCCTCTCGGTTACATCCTCAATTGTTGTCCAGAAAGTaGCCGGCATCCACTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKAGQFSHGLESSRLHPQLLSRK*PASTWS Trigger: AGACCAAGTGGATGCCGGCCACTTTCTGGACAACAA...TTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCAGACAGAGCTTCTTCTTaGTCCTTGTTGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DGTCKNSMADCASDVAGPDRASS*SLLSRK Trigger: CTTTCTGGACAACAAGGACCAAGAAGAAGCTCTGTC...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACCACCGAGATGTCGTCTaGCAGGCTAGAGGAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHHRDVV*QARGVI Trigger: TATGACTCCTCTAGCCTGCCAGACGACATCTCGGTG...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGATTCGAACACTGTACATTCAAGAGTATCTTCAGACATTCTTTAACAGCTACACGCGGTCGTTCTTaGCTCTCGGGTAGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGFEHCTFKSIFRHSLTATRGRS*LSGRGA Trigger: AGCTCCTCTACCCGAGAGCCAAGAACGACCGCGTGT...AGCTGTTAAAGAATGTCTGAAGATACTCTTGAATGTACAGTGTTCGAATCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGACACAGGATTAAGTTGTCCTCTACCTTaGCCACCGAGATGTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVYGLFQNQISDTGLSCPLP*PPRCRL Trigger: CAGACGACATCTCGGTGGTCAAGGTAGAGGACAACT...TAATCCTGTGTCTGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGCAGGACAATTTTCACATGGCTTGGAATCCTCTCGGTTACATCCTCAAACAGCAGGTCCATCTTaGTGTGAAGCTGGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: WKAGQFSHGLESSRLHPQTAGPS*CEAGTY Trigger: ATATGTCCCAGCTTCACAGCAAGATGGACCTGCTGT...TTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGACACAGGATTAAGCTCTGGGAAGAGCTaGAAAAGGAGTCGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVYGLFQNQISDTGLSSGKS*KRSRQA Trigger: AGCCTGTCGACTCCTTTTGCAGCTCTTCCCAGAGCT...TAATCCTGTGTCTGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGTGTAGGAAGGGACAGTaGCCTCAGTGGAAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPCRKGQ*PQWKVP Trigger: AGGAACCTTCCACTGAGGCCACTGTCCCTTCCTACA...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACACACGCGGTCGTTCTTaGCTCTCGGGTAGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMRREKQVATFAFSCFSDTRGRS*LSGRGA Trigger: AGCTCCTCTACCCGAGAGCCAAGAACGACCGCGTGT...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CAA 72 bp | TCCACTTTCTGGAAAGCAGGACAATTTTCACATGGCTaGGAATCCTCTCGGTTACATCCTCAAGACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STFWKAGQFSHG*ESSRLHPQDQN Trigger: GTTCTGGTCTTGAGGATGTAACCGAGAGGATTCCAAGCCATGTGAAAATTGTCCTGCTTTCCAGAAAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCTTTTGCAAAAGTCTTTaGTGCTCCTTTCAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GILSVTSSRPEQIPWNSLFCKSL*CSFQEA Trigger: TGCCTCCTGAAAGGAGCAGCAAAGACTTTTGCAAAA...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGATGTGACGAGATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGTTTTGCAAAAGTCTTTaGTGCTCCTTTCAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRCDEMGLVKTQWPIVLLFCKSL*CSFQEA Trigger: TGCCTCCTGAAAGGAGCAGCAAAGACTTTTGCAAAA...CAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATCTCGTCACATCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | ATCCCGTCTGCTGAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCACGTCCAAGGGTATTTTaGAAAAGTCTTTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSAESKGVYGLFQNQISRPRVF*KSLCCS Trigger: GGAGCAGCAAAGACTTTTGCAAAATACCCTTGGACG...TGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTCAGCAGACGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | GAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGACACAGGATTAGAGAAGGGCCGCTACTaGAGTTTGCCTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVYGLFQNQISDTGLEKGRY*SLPSQR Trigger: TCTTTGAGAAGGCAAACTCCAGTAGCGGCCCTTCTC...TAATCCTGTGTCTGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | GAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGACACAGGATTATGCAAAAGTCTTTGCTaGTCCTTTCAGGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVYGLFQNQISDTGLCKSLC*SFQEAE Trigger: CTCTGCCTCCTGAAAGGAGCAGCAAAGACTTTTGCA...TAATCCTGTGTCTGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACTGTAGGAAGGGACAGTaGCCTCAGTGGAAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NMRREKQVATFAFSCFSDCRKGQ*PQWKVP Trigger: AGGAACCTTCCACTGAGGCCACTGTCCCTTCCTACA...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | GCATTGAAAATTGAATGCCCATTGGGTACATGCAAAATTATATCATGTGGTCTAAGTTGTCCTCTACCTTaGCCACCGAGATGTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALKIECPLGTCKIISCGLSCPLP*PPRCRL Trigger: CAGACGACATCTCGGTGGTCAAGGTAGAGGACAACT...TAGACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTCACAAAGTCTCTGCGCACTTCTCAATGTCAATAATTTAGGTCTTTCTTGGCTTTCTTaGGGATGTCGCACTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVSQSLCALLNVNNLGLSWLS*GCRTFS Trigger: GGAAAAAGTGCGACATCCTCAAGAAAGCCAAGAAAG...ACCTAAATTATTGACATTGAGAAGTGCGCAGAGACTTTGTGACACACACACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040147.8 |
||
| CDS-3UTR TCA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAACTTTCTTGGCTTTCTTaGGGATGTCGCACTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNIRISGLIFSPLDTRQKLSWLS*GCRTFS Trigger: GGAAAAAGTGCGACATCCTCAAGAAAGCCAAGAAAG...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR GCA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACGCCGCTACTGGAGTTTaGCTTCTCAAAGAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NMRREKQVATFAFSCFSDAATGV*LLKELI Trigger: TATGAGCTCTTTGAGAAGGCAAACTCCAGTAGCGGC...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CAA 72 bp | AATCTGAGAATGACAGAGGACAGAAGCTTTATAGCATaGAAAATTGAATGCCCATTGGGTACATGCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NLRMTEDRSFIA*KIECPLGTCKI Trigger: AATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGCTATAAAGCTTCTGTCCTCTGTCATTCTCAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| 3UTR CAA 72 bp | GACAGAAGCTTTATAGCATTGAAAATTGAATGCCCATaGGGTACATGCAAAATTATATCATGTGGTCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: DRSFIALKIECP*GTCKIISCGLL Trigger: TAGTAGACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGCTATAAAGCTTCTGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS TCA 90 bp | CGTCGCTGTCCAGCTGCTTGCGCTTGCTGGAATCGTGGAGGGCGGTaGGGACGCTCTCCAGAAGGTGCTTCTCGGAGGCCCTGGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRCPAACACWNRGGR*GRSPEGASRRPWSS Trigger: GGAACTCCAGGGCCTCCGAGAAGCACCTTCTGGAGAGCGTCCTCACCGCCCTCCACGATTCCAGCAAGCGCAAGCAGCTGGACAGCGACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 ENSMUST00000214116.2 ENSMUST00000216679.2 |
||
| CDS GCA 90 bp | CGCTTGCTGGAATCGTGGAGGGCGGTGAGGACGCTCTCCAGAAGGTaGTTCTCGGAGGCCCTGGAGTTCCGGGAGCAGTCCAAGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLLESWRAVRTLSRR*FSEALEFREQSKVA Trigger: CGCTACCTTGGACTGCTCCCGGAACTCCAGGGCCTCCGAGAAGCACCTTCTGGAGAGCGTCCTCACCGCCCTCCACGATTCCAGCAAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 ENSMUST00000214116.2 ENSMUST00000216679.2 |
||
| CDS GCA 90 bp | TCGGGCGGGGGCTGGAACTTGGCCACCAGCTCGGAAGGGCTCACCTaGTTCTTGACACGGCTCACCTCGAGGGACAGCAGGTCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGGGWNLATSSEGLT*FLTRLTSRDSRSIL Trigger: CAAGATGGACCTGCTGTCCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS TCA 90 bp | CGCAAGACAGGCTCTGCTCGGCGATTTGTTTCAGCTCGGAAGCAGTaGGCTGGTACTCGGGCGGGGGCTGGAACTTGGCCACCAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKTGSARRFVSARKQ*AGTRAGAGTWPPAR Trigger: CCGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGAGTACCAGCTCACTGCTTCCGAGCTGAAACAAATCGCCGAGCAGAGCCTGTCTTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAATCTGCTTCGAAGAAGTaGGTGACCTGGCCGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEEIRTSMLGVGQGRLAESASKK*VTWPPG Trigger: GCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGA...TTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAAAGGGAGCCGCTGCAGTaGTACTGCTTGCGCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GEEIRTSMLGVGQGRLAEREPLQ*YCLRRF Trigger: GAACCTGCGCAAGCAGTACAACTGCAGCGGCTCCCT...TTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAGATACGCACCTCCATGCTAGGGGTGGGCCAGGGTAGGCTGGCAGAACAAGCCCCGGAGTGGTaGTACTGCAGTCGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GEEIRTSMLGVGQGRLAEQAPEW*YCSRRF Trigger: GAACCTCCGACTGCAGTACAACCACTCCGGGGCTTG...TTCTGCCAGCCTACCCTGGCCCACCCCTAGCATGGAGGTGCGTATCTCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS TCA 90 bp | CATCGGTGGCAACCCCGACACCACATTCCCGCTTCTGAGACTCACTaGGCAGGCGCAGGGGAGAAGGGCCGCTACTGGAGTTTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRWQPRHHIPASETH*AGAGEKGRYWSLPS Trigger: AGAAGGCAAACTCCAGTAGCGGCCCTTCTCCCCTGCGCCTGCTCAGTGAGTCTCAGAAGCGGGAATGTGGTGTCGGGGTTGCCACCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS TCA 90 bp | GGGGCTGGAACTTGGCCACCAGCTCGGAAGGGCTCACCTGCTTCTTaGCACGGCTCACCTCGAGGGACAGCAGGTCCATCTTGCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGTWPPARKGSPAS*HGSPRGTAGPSCCE Trigger: TTCACAGCAAGATGGACCTGCTGTCCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS TCA 90 bp | CCAGAAAGTGGCCGGCATCCACTTGGTCTGCTTCGAAGAAGTTGGTaGCCTGGCCGCCTGGCTGGCTGTCTTCCATTTCTCTCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PESGRHPLGLLRRSW*PGRLAGCLPFLSGP Trigger: GGGCCCAGAGAGAAATGGAAGACAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CCA 90 bp | ATTTGTTTCAGCTCGGAAGCAGTGAGCTGGTACTCGGGCGGGGGCTaGAACTTGGCCACCAGCTCGGAAGGGCTCACCTGCTTCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ICFSSEAVSWYSGGG*NLATSSEGLTCFLT Trigger: TGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGAGTACCAGCTCACTGCTTCCGAGCTGAAACAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS CCA 90 bp | GCTTCTTCTTGGTCCTTGTTGTCCAGAAAGTGGCCGGCATCCACTTaGTCTGCTTCGAAGAAGTTGGTGACCTGGCCGCCTGGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSWSLLSRKWPAST*SASKKLVTWPPGWL Trigger: CAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGGACAACAAGGACCAAGAAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS CCA 90 bp | CTCACCTTCAAAGTTGTCCTCTACCTTGACCACCGAGATGTCGTCTaGCAGGCTAGAGGAGTCATAGCAGTCGTCCCGCGGTGCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LTFKVVLYLDHRDVV*QARGVIAVVPRCLT Trigger: GGTGAGGCACCGCGGGACGACTGCTATGACTCCTCTAGCCTGCCAGACGACATCTCGGTGGTCAAGGTAGAGGACAACTTTGAAGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCGGGCTCACCTGCTTCTaGACACGGCTCACCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWDWEGVWALHLRWFGFFGLTCF*TRLTSR Trigger: CCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCC...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GATGGGACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCAGGCGGGGGCTGGAACTaGGCCACCAGCTCGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DGTCKNSMADCASDVAGPGGGWN*ATSSEG Trigger: CCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGCC...TGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGTCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS GCA 90 bp | AGCTGCAAAAGGAGTCGACAGGCTAGGTCACCGCAAGACAGGCTCTaGTCGGCGATTTGTTTCAGCTCGGAAGCAGTGAGCTGGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCKRSRQARSPQDRL*SAICFSSEAVSWYS Trigger: CGAGTACCAGCTCACTGCTTCCGAGCTGAAACAAATCGCCGAGCAGAGCCTGTCTTGCGGTGACCTAGCCTGTCGACTCCTTTTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS GCA 90 bp | TTCTTGGTCCTTGTTGTCCAGAAAGTGGCCGGCATCCACTTGGTCTaGTTCGAAGAAGTTGGTGACCTGGCCGCCTGGCTGGCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLVLVVQKVAGIHLV*FEEVGDLAAWLAVF Trigger: GAAGACAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGGACAACAAGGACCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTGTGTGGAGGGCACAGCTCCTCTGCTTCGAAGAAGTaGGTGACCTGGCCGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVLQCVPLQQHLCGGHSSSASKK*VTWPPG Trigger: GCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGA...GGAGCTGTGCCCTCCACACAGATGTTGCTGTAGAGGGACACATTGCAACACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGACTGGGAAGGGGTGTGGGCACTCCATTTAAGATGGTTTGGGTTCTTCAGGGAGCCGCTGCAGTaGTACTGCTTGCGCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WWDWEGVWALHLRWFGFFREPLQ*YCLRRF Trigger: GAACCTGCGCAAGCAGTACAACTGCAGCGGCTCCCT...GAAGAACCCAAACCATCTTAAATGGAGTGCCCACACCCCTTCCCAGTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCGACTCTAACTTCCGCTaGGCGGCAAAGCCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GWNSLCRLTRLASNSSGLDSNFR*AAKPQA Trigger: TGCCTGTGGCTTTGCCGCCAAGCGGAAGTTAGAGTC...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGAATTCACTCTGCAGACTAACTAGACTGGCCTCAAACTCCAGTGGCCTCCGCTCACCTTCAAAGTaGTCCTCTACCTTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GWNSLCRLTRLASNSSGLRSPSK*SSTLTT Trigger: GGTGGTCAAGGTAGAGGACAACTTTGAAGGTGAGCG...GAGGCCACTGGAGTTTGAGGCCAGTCTAGTTAGTCTGCAGAGTGAATTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGACCAGCCAGATCTTCTaGGAGCGCCGGCCAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPTSQIF*ERRPGR Trigger: GCGGCCTGGCCGGCGCTCCAAGAAGATCTGGCTGGT...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCCTGCGCAGCTGCTCCTaGCTCAGAAGGCAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GILSVTSSRPEQIPWNSLLRSCS*LRRQSE Trigger: CTCAGACTGCCTTCTGAGCAAGGAGCAGCTGCGCAG...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCGTCTGCTGAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCACTGCAGTTGTACTGCTaGCGCAGGTTCTCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSAESKGVYGLFQNQISLQLYC*RRFSWV Trigger: CACCCACGAGAACCTGCGCAAGCAGTACAACTGCAG...TGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTCAGCAGACGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAACAGCGCTCGTCCAGCTaGCCTACGAACTCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNIRISGLIFSPLDTRQKQRSSS*PTNSRV Trigger: GACCCTGGAGTTCGTAGGCAAGCTGGACGAGCGCTG...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTTGCAATGTGTCCCTCTACAGCAACATCTGTGTGGAGGGCACAGCTCCATTTTGCAAAAGTCTTaGCTGCTCCTTTCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVLQCVPLQQHLCGGHSSILQKS*LLLSGG Trigger: GCCTCCTGAAAGGAGCAGCAAAGACTTTTGCAAAAT...GGAGCTGTGCCCTCCACACAGATGTTGCTGTAGAGGGACACATTGCAACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCCGCTCACCTTCAAAGTaGTCCTCTACCTTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GILSVTSSRPEQIPWNSLRSPSK*SSTLTT Trigger: GGTGGTCAAGGTAGAGGACAACTTTGAAGGTGAGCG...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | GCATTGAAAATTGAATGCCCATTGGGTACATGCAAAATTATATCATGTGGTCTAACCAGCCAGATCTTCTaGGAGCGCCGGCCAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALKIECPLGTCKIISCGLTSQIF*ERRPGR Trigger: GCGGCCTGGCCGGCGCTCCAAGAAGATCTGGCTGGT...TAGACCACATGATATAATTTTGCATGTACCCAATGGGCATTCAATTTTCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACGGGCTCACCTGCTTCTaGACACGGCTCACCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NMRREKQVATFAFSCFSDGLTCF*TRLTSR Trigger: CCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCC...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAAGACTCTAACTTCCGCTaGGCGGCAAAGCCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VNIRISGLIFSPLDTRQKDSNFR*AAKPQA Trigger: TGCCTGTGGCTTTGCCGCCAAGCGGAAGTTAGAGTC...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | TTTGGTAAACCTATGCTCCTTACTTACTCCTCACAGTATCGCTCTGATATCCACGTGGCCGGCATCCACTaGGTCTGCTTCGAAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FGKPMLLTYSSQYRSDIHVAGIH*VCFEEV Trigger: AACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCAC...GTGGATATCAGAGCGATACTGTGAGGAGTAAGTAAGGAGCATAGGTTTACCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | GGAATCCTCTCGGTTACATCCTCAAGACCAGAACAAATCCCATGGAATTCTCTCAAGTTGTCCTCTACCTaGACCACCGAGATGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GILSVTSSRPEQIPWNSLKLSST*TTEMSS Trigger: AGACGACATCTCGGTGGTCAAGGTAGAGGACAACTT...GAGAGAATTCCATGGGATTTGTTCTGGTCTTGAGGATGTAACCGAGAGGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCAGACAGAGCTTCTTCTaGGTCCTTGTTGTCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCKNSMADCASDVAGPHSRQSFF*VLVVQK Trigger: TTTCTGGACAACAAGGACCAAGAAGAAGCTCTGTCT...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS-3UTR CAA 90 bp | GATGTAAAACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTCAGCGCTCGTCCAGCTaGCCTACGAACTCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVKHEERETSCYVCIFLFQRSSS*PTNSRV Trigger: GACCCTGGAGTTCGTAGGCAAGCTGGACGAGCGCTG...AAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTTTTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | ACTTGTAAAAACTCAATGGCCGATTGTGCTTCTGATGTTGCAGGGCCACACTCCTCGTCCAAGGGTATTTaGCAAAAGTCTTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCKNSMADCASDVAGPHSSSKGI*QKSLLL Trigger: GAGCAGCAAAGACTTTTGCAAAATACCCTTGGACGA...GGAGTGTGGCCCTGCAACATCAGAAGCACAATCGGCCATTGAGTTTTTACAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACCAAGCCCCGGAGTGGTaGTACTGCAGTCGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NMRREKQVATFAFSCFSDQAPEW*YCSRRF Trigger: GAACCTCCGACTGCAGTACAACCACTCCGGGGCTTG...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGGGCCGCTACTGGAGTTaGCCTTCTCAAAGAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPGRYWS*PSQRAH Trigger: ATGAGCTCTTTGAGAAGGCAAACTCCAGTAGCGGCC...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAAGGCCGCTACTGGAGTTaGCCTTCTCAAAGAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VNIRISGLIFSPLDTRQKGRYWS*PSQRAH Trigger: ATGAGCTCTTTGAGAAGGCAAACTCCAGTAGCGGCC...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GATTCGTGTGTGCCACAAAGTCTCTGCGCACTTCTCAATGTCAATAATTTAGGTTGCGGGATCTCCAACTaGTCAAAGTCAATGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: DSCVPQSLCALLNVNNLGCGISN*SKSMGT Trigger: GGTACCCATTGACTTTGACAAGTTGGAGATCCCGCA...ACCTAAATTATTGACATTGAGAAGTGCGCAGAGACTTTGTGGCACACACGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GATGTAAAACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTCTGCGCAGCTGCTCCTaGCTCAGAAGGCAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DVKHEERETSCYVCIFLFLRSCS*LRRQSE Trigger: CTCAGACTGCCTTCTGAGCAAGGAGCAGCTGCGCAG...AAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTTTTACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | AACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTTTCAGACGTGGCCGGCATCCACTaGGTCTGCTTCGAAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NMRREKQVATFAFSCFSDVAGIH*VCFEEV Trigger: AACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCAC...GTCTGAAAAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | AACCAAAATACAGGTTCCCAGAATTTAACACACTCTGGGTTACAAAAAGTCCCGTGCGGGATCTCCAACTaGTCAAAGTCAATGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: NQNTGSQNLTHSGLQKVPCGISN*SKSMGT Trigger: GGTACCCATTGACTTTGACAAGTTGGAGATCCCGCA...CGGGACTTTTTGTAACCCAGAGTGTGTTAAATTCTGGGAACCTGTATTTTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GATGTAAAACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTCTGCAGTTGTACTGCTaGCGCAGGTTCTCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DVKHEERETSCYVCIFLFLQLYC*RRFSWV Trigger: CACCCACGAGAACCTGCGCAAGCAGTACAACTGCAG...AAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTTTTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GTGAACATCAGAATATCGGGGCTAATCTTTAGTCCTCTGGATACAAGGCAAAAAATTTTGCAAAAGTCTTaGCTGCTCCTTTCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNIRISGLIFSPLDTRQKILQKS*LLLSGG Trigger: GCCTCCTGAAAGGAGCAGCAAAGACTTTTGCAAAAT...TTTTTGCCTTGTATCCAGAGGACTAAAGATTAGCCCCGATATTCTGATGTTCAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GAATCTAAGGGGGTCTATGGACTCTTCCAAAATCAGATATCAGACACAGGATTATCGTCCAAGGGTATTTaGCAAAAGTCTTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESKGVYGLFQNQISDTGLSSKGI*QKSLLL Trigger: GAGCAGCAAAGACTTTTGCAAAATACCCTTGGACGA...TAATCCTGTGTCTGATATCTGATTTTGGAAGAGTCCATAGACCCCCTTAGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS-3UTR CAA 90 bp | GATGTAAAACATGAGGAGAGAGAAACAAGTTGCTACGTTTGCATTTTCTTGTTTAGACAGAGCTTCTTCTaGGTCCTTGTTGTCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DVKHEERETSCYVCIFLFRQSFF*VLVVQK Trigger: TTTCTGGACAACAAGGACCAAGAAGAAGCTCTGTCT...AAACAAGAAAATGCAAACGTAGCAACTTGTTTCTCTCTCCTCATGTTTTACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
||
| CDS CCA 72 bp | CCACTCCTGCCCCTGCTGGCAGGCTCTCCATTTCCCTaGCAGGGCGAACTGTTCTCACGGGTGCGCATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLLPLLAGSPFP*QGELFSRVRMP Trigger: CGGCATGCGCACCCGTGAGAACAGTTCGCCCTGCCAGGGAAATGGAGAGCCTGCCAGCAGGGGCAGGAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 ENSMUST00000214116.2 ENSMUST00000216679.2 |
||
| CDS CCA 72 bp | AGCTCGGAAGCAGTGAGCTGGTACTCGGGCGGGGGCTaGAACTTGGCCACCAGCTCGGAAGGGCTCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSEAVSWYSGGG*NLATSSEGLTC Trigger: GCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGAGTACCAGCTCACTGCTTCCGAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS TCA 72 bp | CCAGCTGCTTGCGCTTGCTGGAATCGTGGAGGGCGGTaGGGACGCTCTCCAGAAGGTGCTTCTCGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PAACACWNRGGR*GRSPEGASRRP Trigger: GGGCCTCCGAGAAGCACCTTCTGGAGAGCGTCCTCACCGCCCTCCACGATTCCAGCAAGCGCAAGCAGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 ENSMUST00000214116.2 ENSMUST00000216679.2 |
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| CDS TCA 72 bp | CCATCGGTGGCAACCCCGACACCACATTCCCGCTTCTaGGACTCACTGAGCAGGCGCAGGGGAGAAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PSVATPTPHSRF*DSLSRRRGEGP Trigger: CGGCCCTTCTCCCCTGCGCCTGCTCAGTGAGTCTCAGAAGCGGGAATGTGGTGTCGGGGTTGCCACCGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS GCA 72 bp | GGCTGGAACTTGGCCACCAGCTCGGAAGGGCTCACCTaGTTCTTGACACGGCTCACCTCGAGGGACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GWNLATSSEGLT*FLTRLTSRDSR Trigger: CCTGCTGTCCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTTCCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 90 bp | TTCAGCTCGGAAGCAGTGAGCTGGTACTCGGGCGGGGGCTGGAACTaGGCCACCAGCTCGGAAGGGCTCACCTGCTTCTTGACACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FSSEAVSWYSGGGWN*ATSSEGLTCFLTRL Trigger: GAGCCGTGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTTCCAGCCCCCGCCCGAGTACCAGCTCACTGCTTCCGAGCTGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS TCA 72 bp | CAACCCCGACACCACATTCCCGCTTCTGAGACTCACTaGGCAGGCGCAGGGGAGAAGGGCCGCTACTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: QPRHHIPASETH*AGAGEKGRYWS Trigger: ACTCCAGTAGCGGCCCTTCTCCCCTGCGCCTGCTCAGTGAGTCTCAGAAGCGGGAATGTGGTGTCGGGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS TCA 72 bp | ACTTGGCCACCAGCTCGGAAGGGCTCACCTGCTTCTTaGCACGGCTCACCTCGAGGGACAGCAGGTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: TWPPARKGSPAS*HGSPRGTAGPS Trigger: AGATGGACCTGCTGTCCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 72 bp | AACTTGGCCACCAGCTCGGAAGGGCTCACCTGCTTCTaGACACGGCTCACCTCGAGGGACAGCAGGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: NLATSSEGLTCF*TRLTSRDSRSI Trigger: GATGGACCTGCTGTCCCTCGAGGTGAGCCGTGTCAAGAAGCAGGTGAGCCCTTCCGAGCTGGTGGCCAAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS TCA 72 bp | GGCCGGCATCCACTTGGTCTGCTTCGAAGAAGTTGGTaGCCTGGCCGCCTGGCTGGCTGTCTTCCATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRHPLGLLRRSW*PGRLAGCLPFL Trigger: GAGAAATGGAAGACAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 72 bp | CGGCCAGGCCGCTCACCTTCAAAGTTGTCCTCTACCTaGACCACCGAGATGTCGTCTGGCAGGCTAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RPGRSPSKLSST*TTEMSSGRLEE Trigger: CTCCTCTAGCCTGCCAGACGACATCTCGGTGGTCAAGGTAGAGGACAACTTTGAAGGTGAGCGGCCTGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 72 bp | TTCTTGGAGCGCCGGCCAGGCCGCTCACCTTCAAAGTaGTCCTCTACCTTGACCACCGAGATGTCGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: FLERRPGRSPSK*SSTLTTEMSSG Trigger: GCCAGACGACATCTCGGTGGTCAAGGTAGAGGACAACTTTGAAGGTGAGCGGCCTGGCCGGCGCTCCAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS GCA 72 bp | CTTGTTGTCCAGAAAGTGGCCGGCATCCACTTGGTCTaGTTCGAAGAAGTTGGTGACCTGGCCGCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVVQKVAGIHLV*FEEVGDLAAWL Trigger: CAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGGACAACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 72 bp | AAGTGGCCGGCATCCACTTGGTCTGCTTCGAAGAAGTaGGTGACCTGGCCGCCTGGCTGGCTGTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: KWPASTWSASKK*VTWPPGWLSSI Trigger: AATGGAAGACAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 90 bp | TTGTCCAGAAAGTGGCCGGCATCCACTTGGTCTGCTTCGAAGAAGTaGGTGACCTGGCCGCCTGGCTGGCTGTCTTCCATTTCTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSRKWPASTWSASKK*VTWPPGWLSSISLW Trigger: CCAGAGAGAAATGGAAGACAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CAA 90 bp | AGCTTCTTCTTGGTCCTTGTTGTCCAGAAAGTGGCCGGCATCCACTaGGTCTGCTTCGAAGAAGTTGGTGACCTGGCCGCCTGGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFFLVLVVQKVAGIH*VCFEEVGDLAAWLA Trigger: AGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGGACAACAAGGACCAAGAAGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CCA 72 bp | ACAGGGGCTTCTTGTAGGAAGGGACAGTGGCCTCAGTaGAAGGTTCCTCTTCTGCAGGCCATGCACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TGASCRKGQWPQ*KVPLLQAMHSF Trigger: GAAGCTGTGCATGGCCTGCAGAAGAGGAACCTTCCACTGAGGCCACTGTCCCTTCCTACAAGAAGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 ENSMUST00000214116.2 ENSMUST00000216679.2 |
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| CDS CCA 72 bp | GCATCCACTTGGTCTGCTTCGAAGAAGTTGGTGACCTaGCCGCCTGGCTGGCTGTCTTCCATTTCTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASTWSASKKLVT*PPGWLSSISLW Trigger: CCAGAGAGAAATGGAAGACAGCCAGCCAGGCGGCCAGGTCACCAACTTCTTCGAAGCAGACCAAGTGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CCA 72 bp | AAAGTTGTCCTCTACCTTGACCACCGAGATGTCGTCTaGCAGGCTAGAGGAGTCATAGCAGTCGTCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: KVVLYLDHRDVV*QARGVIAVVPR Trigger: CCGCGGGACGACTGCTATGACTCCTCTAGCCTGCCAGACGACATCTCGGTGGTCAAGGTAGAGGACAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS TCA 72 bp | CGGCTCACCTCGAGGGACAGCAGGTCCATCTTGCTGTaGAGCTGGGACATATTAGTCGTGAGTCCATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RLTSRDSRSILL*SWDILVVSPLS Trigger: GCTCAATGGACTCACGACTAATATGTCCCAGCTTCACAGCAAGATGGACCTGCTGTCCCTCGAGGTGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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| CDS CCA 72 bp | GACAGAGCTTCTTCTTGGTCCTTGTTGTCCAGAAAGTaGCCGGCATCCACTTGGTCTGCTTCGAAGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: DRASSWSLLSRK*PASTWSASKKL Trigger: CAACTTCTTCGAAGCAGACCAAGTGGATGCCGGCCACTTTCTGGACAACAAGGACCAAGAAGAAGCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040147.8 ENSMUST00000167488.9 |
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