RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BEGAIN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040867

Ensembl transcript IDs: ENSMUST00000185745.2, ENSMUST00000190647.3, ENSMUST00000209829.2, ENSMUST00000238841.2, ENSMUST00000239108.2

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGAACGAGCACCGGCTGTTCTGGGGGTGTCCCTGGCCTCTCTTaGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGG +
Preference number: 1 (lower is better)
Translates to: GGTSTGCSGGVPGLS*AHRPGHGKAQGGSG
Trigger: CCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGGCCAGGGACACCCCCAGAACAGCCGGTGCTCGTTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CCA 90 bp TGGCCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTaGATCAGGGCGGAGTGCTGGCTGCACTGTGAGACGAGAGCAGAA +
Preference number: 1 (lower is better)
Translates to: WPLLGPQAGPWKSSG*IRAECWLHCETRAE
Trigger: TTCTGCTCTCGTCTCACAGTGCAGCCAGCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR GCA 90 bp CCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTaGTGGCTGCACTGTGAGACGAGAGCAGAAGACATTTTCTGCGCC +
Preference number: 1 (lower is better)
Translates to: PQAGPWKSSGWIRAE*WLHCETRAEDIFCA
Trigger: GGCGCAGAAAATGTCTTCTGCTCTCGTCTCACAGTGCAGCCAGCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR GCA 90 bp GCGGAGTGCTGGCTGCACTGTGAGACGAGAGCAGAAGACATTTTCTaGGCCCTAAGTGGCTTTGGTTCCCCTCCTCAGTGTACAGAACTT +
Preference number: 1 (lower is better)
Translates to: AECWLHCETRAEDIF*ALSGFGSPPQCTEL
Trigger: AAGTTCTGTACACTGAGGAGGGGAACCAAAGCCACTTAGGGCGCAGAAAATGTCTTCTGCTCTCGTCTCACAGTGCAGCCAGCACTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CCA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGGTTTGTAGCAGAGGCTaGGGGGTCTGTAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRVCSRG*GVCSRG
Trigger: GCCTCTGCTACAGACCCCCCAGCCTCTGCTACAAAC...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CCA 90 bp TTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCCGCCCTAAGTGGCTTTaGTTCCCCTCCTCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: LGPQAGPWKSSGWIRAECRPKWL*FPSSVY
Trigger: GTACACTGAGGAGGGGAACCAAAGCCACTTAGGGCG...GCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CCA 90 bp GGAGGAGGGAGGAGCCTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGACCACAGGCCGGGCCATaGAAAAGCTCAGGGTGGATC +
Preference number: 2 (lower is better)
Translates to: GGGRSLMSEVESGGVGRGPQAGP*KSSGWI
Trigger: GATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGG...TCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAGGCTCCTCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CCA 90 bp GGAGGAGGGAGGAGCCTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGACGCCCTAAGTGGCTTTaGTTCCCCTCCTCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: GGGRSLMSEVESGGVGRGRPKWL*FPSSVY
Trigger: GTACACTGAGGAGGGGAACCAAAGCCACTTAGGGCG...TCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAGGCTCCTCCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CCA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGTTGTTCCCTTGTTTCTaGCTTCTCCCCTCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRLFPCF*LLPSCG
Trigger: TCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAA...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CAA 90 bp GTACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTaGTGGAGACTGGTCCCTCTAGGGTCCCAGCCTCCCCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: VQNFPLVPLFLASPL*WRLVPLGSQPPLPW
Trigger: CCAGGGAAGGGGAGGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR GCA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAATCTAGCGGCAAGTaGGTGAAGAAACACTCTCTT +
Preference number: 2 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRAESSGK*VKKHSL
Trigger: AAGAGAGTGTTTCTTCACGCACTTGCCGCTAGATTC...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CCA 90 bp CTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGAAGGGGAGGAACGAGCAGGCGAAACTGGAACTaGACTTCCTTGGCAGGGGTT +
Preference number: 2 (lower is better)
Translates to: LMSEVESGGVGRGRGGTSRRNWN*TSLAGV
Trigger: AACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCT...GCTCGTTCCTCCCCTTCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR GCA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGACCTTCATGTGGGGTTTaGCAAGGCTGCCACCCAGAA +
Preference number: 2 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGPSCGV*QGCHPE
Trigger: TTCTGGGTGGCAGCCTTGGCAAACCCCACATGAAGG...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR TCA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGACACCCTCACTGGAAATaGAGGACCTTCATGTGGGGT +
Preference number: 2 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGHPHWK*RTFMWG
Trigger: ACCCCACATGAAGGTCCTTCATTTCCAGTGAGGGTG...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CAA 90 bp GCTTTGGTTCCCCTCCTCAGTGTACAGAACTTCCCACTTGTTCCCTaGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGG +
Preference number: 2 (lower is better)
Translates to: ALVPLLSVQNFPLVP*FLASPLLWRLVPLG
Trigger: CCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTACACTGAGGAGGGGAACCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CAA 90 bp CCTAAGTGGCTTTGGTTCCCCTCCTCAGTGTACAGAACTTCCCACTaGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCC +
Preference number: 2 (lower is better)
Translates to: PKWLWFPSSVYRTSH*FPCFWLLPSCGDWS
Trigger: GGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTACACTGAGGAGGGGAACCAAAGCCACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR GCA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACCACTTCAGGGAAGGGTaGAGAGCAGAAATATTCGGG +
Preference number: 2 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDHFREG*RAEIFG
Trigger: CCCGAATATTTCTGCTCTGCACCCTTCCCTGAAGTG...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CCA 72 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTaGAACTGGACTTCCTTGGCAGGGGTTGGGACGAGG +
Preference number: 3 (lower is better)
Translates to: FYWGGSRRVRRN*NWTSLAGVGTR
Trigger: CCTCGTCCCAACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
3UTR-3UTR CAA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGATACAGAACTTCCCACTaGTTCCCTTGTTTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGYRTSH*FPCFWL
Trigger: AAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR GCA 72 bp GGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCTGGCTaGACTGTGAGACGAGAGCAGAAGACATTTTCTGCG +
Preference number: 3 (lower is better)
Translates to: GKAQGGSGRSAG*TVRREQKTFSA
Trigger: CGCAGAAAATGTCTTCTGCTCTCGTCTCACAGTGCAGCCAGCACTCCGCCCTGATCCACCCTGAGCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR-3UTR CAA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTACCTTCATGTGGGGTTaGCCAAGGCTGCCACCCAGA +
Preference number: 3 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPTFMWG*PRLPPR
Trigger: TCTGGGTGGCAGCCTTGGCAAACCCCACATGAAGGT...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR GCA 72 bp ACCCTCACTGGAAATGAAGGACCTTCATGTGGGGTTTaGCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGC +
Preference number: 3 (lower is better)
Translates to: TLTGNEGPSCGV*QGCHPESSGKC
Trigger: GCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGAAGGTCCTTCATTTCCAGTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CCA 72 bp CCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCTaGCTGCACTGTGAGACGAGAGCAGAAGACATTTTC +
Preference number: 3 (lower is better)
Translates to: PWKSSGWIRAEC*LHCETRAEDIF
Trigger: GAAAATGTCTTCTGCTCTCGTCTCACAGTGCAGCCAGCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR GCA 72 bp GGAAATGAAGGACCTTCATGTGGGGTTTGCCAAGGCTaGCACCCAGAATCTAGCGGCAAGTGCGTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: GNEGPSCGVCQG*HPESSGKCVKK
Trigger: TTTCTTCACGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGAAGGTCCTTCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
3UTR CCA 72 bp GAGAGCAGAAGACATTTTCTGCGCCCTAAGTGGCTTTaGTTCCCCTCCTCAGTGTACAGAACTTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: ESRRHFLRPKWL*FPSSVYRTSHL
Trigger: CAAGTGGGAAGTTCTGTACACTGAGGAGGGGAACCAAAGCCACTTAGGGCGCAGAAAATGTCTTCTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCGAGGCGGTCAGCGTaGCGGCCTGCGCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSARRSA*RPARAP
Trigger: AGGAGCACGCGCAGGCCGGCACGCTGACCGCCTCGC...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGGCCTTGGGAGCCCCTaGAGCCCTCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRAGLGSP*SPPGSL
Trigger: CAGTGACCCTGGAGGGCTTCAGGGGCTCCCAAGGCC...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp CTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGGTGCCGGCCTGCGCGTaGTCCTTCTCCTCGGACGTG +
Preference number: 4 (lower is better)
Translates to: LGPTGRAMEKLRVDQGGVVPACA*SFSSDV
Trigger: CACGTCCGAGGAGAAGGAGCACGCGCAGGCCGGCAC...CACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGACGGGCTCCGGGCTACTaGCAGCCCCACACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGRAPGY*QPHTAA
Trigger: TGCAGCTGTGTGGGGCTGGCAGTAGCCCGGAGCCCG...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGTCCTTGGGAAGGCCTaGTGGGGGCTGAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRAVLGKA*WGLRRV
Trigger: CACTCGCCTCAGCCCCCAGCAGGCCTTCCCAAGGAC...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGGTTCCCGCTCGGCTTaGCCCGCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSGSRSA*PAGSTG
Trigger: ACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACC...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGACTCACGGGCCGCCACTaGCCTCGAATGTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGLTGRH*PRMSSP
Trigger: CGGGGAGGACATTCGAGGCCAGTGGCGGCCCGTGAG...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCTGGCCCGGAGCTGTaGTCACCTGGAGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSAGPEL*SPGEGS
Trigger: GGAGCCCTCTCCAGGTGACCACAGCTCCGGGCCAGC...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTACAGGTTTGGAGGCATaGGAGCCTGCTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSTGLEA*EPAGGR
Trigger: CCGGCCCCCAGCAGGCTCTCATGCCTCCAAACCTGT...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCCTGTCGGTGGAATTCTaGGCCCGCAGGAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: LGPQAGPWKSSGWIRAECLSVEF*ARRKPT
Trigger: CGTGGGCTTCCTGCGGGCGCAGAATTCCACCGACAG...GCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTAGTAGGAGCTGGAGGTaGGCAGCGAGGCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSSRSWR*AARPRS
Trigger: GCTACGCGGCCTCGCTGCCCACCTCCAGCTCCTACT...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CAGGCGAAACTGGAACTGGACTTCCTTGGCAGGGGTTGGGACGAGGGGGTGGGGAGTAGGAGCTGGAGGTaGGCAGCGAGGCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: QAKLELDFLGRGWDEGVGSRSWR*AARPRS
Trigger: GCTACGCGGCCTCGCTGCCCACCTCCAGCTCCTACT...CCCCACCCCCTCGTCCCAACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCAAGCCTGGGGCGACCTaGGCCTCCAGCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPAKPGAT*ASSGEP
Trigger: GGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTT...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CAGGCGAAACTGGAACTGGACTTCCTTGGCAGGGGTTGGGACGAGGGGGTGGGGCTTGGGAAGGCCTGCTaGGGGCTGAGGCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: QAKLELDFLGRGWDEGVGLGKAC*GLRRVG
Trigger: TCCCACTCGCCTCAGCCCCCAGCAGGCCTTCCCAAG...CCCCACCCCCTCGTCCCAACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCAGAGCCTCCAGTCCTTaGGAAGGCCTGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGPQAGPWKSSGWIRAECRASSP*EGLLGA
Trigger: AGCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCT...GCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGGCAGGCTGCAGCCATaGTTCTCCATGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRAGRLQP*FSMCRL
Trigger: GAGCCTGCACATGGAGAAGCATGGCTGCAGCCTGCC...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp CTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGAAGGGGAGGAACGAGCGTGCCGGCCTGCGCGTaGTCCTTCTCCTCGGACGTG +
Preference number: 4 (lower is better)
Translates to: LMSEVESGGVGRGRGGTSVPACA*SFSSDV
Trigger: CACGTCCGAGGAGAAGGAGCACGCGCAGGCCGGCAC...GCTCGTTCCTCCCCTTCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACGGAGGCATGAGAGCCTaGTGGGGGCCGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNGGMRA*WGPGEA
Trigger: GGCCTCCCCCGGCCCCCAGCAGGCTCTCATGCCTCC...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACAAGCCTGGGGCGACCTaGGCCTCCAGCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNKPGAT*ASSGEP
Trigger: GGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTT...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR TCA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGGTTCCTGGAGGGCACTaGGTTTCTCCATGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRVPGGH*VSPCLR
Trigger: CCGCAGACATGGAGAAACTCAGTGCCCTCCAGGAAC...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp CTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCCTCCAGCTCTTGGTTaGTCCTCTGCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: LGPTGRAMEKLRVDQGGVPPALG*SSAAPC
Trigger: ACATGGCGCTGCAGAGGATCAACCAAGAGCTGGAGG...CACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAACAGGTTTGGAGGCATaGGAGCCTGCTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRTGLEA*EPAGGR
Trigger: CCGGCCCCCAGCAGGCTCTCATGCCTCCAAACCTGT...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCTGTAGGAGAGCCGCTTaGGCAGCTCGCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGPQAGPWKSSGWIRAECCRRAA*AARPSV
Trigger: AACAGAAGGGCGAGCTGCGCAAGCGGCTCTCCTACA...GCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGGCAGGCTGCAGCCATaGTTCTCCATGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSGRLQP*FSMCRL
Trigger: GAGCCTGCACATGGAGAAGCATGGCTGCAGCCTGCC...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCAGAACTCGTCGCGGCTaGTCAGGTAGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGPQAGPWKSSGWIRAECRTRRG*SGRWPA
Trigger: AGCAGGCCATCTACCTGAGCAGCCGCGACGAGTTCT...GCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGACTGCACTGCAGCAGCTaGGCCGCTAGATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGLHCSS*AARLQS
Trigger: GGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAG...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CAGGCGAAACTGGAACTGGACTTCCTTGGCAGGGGTTGGGACGAGGGGGTGGGGCTGCACTGCAGCAGCTaGGCCGCTAGATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QAKLELDFLGRGWDEGVGLHCSS*AARLQS
Trigger: GGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAG...CCCCACCCCCTCGTCCCAACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAGTAGGAGCTGGAGGTaGGCAGCGAGGCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRSRSWR*AARPRS
Trigger: GCTACGCGGCCTCGCTGCCCACCTCCAGCTCCTACT...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTAAGCCTGGGGCGACCTaGGCCTCCAGCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPKPGAT*ASSGEP
Trigger: GGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTT...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGCAGGCTCCACAGGTTTaGAGGCATGAGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRQAPQV*RHESLL
Trigger: CAGCAGGCTCTCATGCCTCCAAACCTGTGGAGCCTG...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCCTCACGGGCCGCCACTaGCCTCGAATGTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPALTGRH*PRMSSP
Trigger: CGGGGAGGACATTCGAGGCCAGTGGCGGCCCGTGAG...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCCCTGGAGAGGGCTCCTaGCTGTGGCCTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPAPGEGS*LWPWEP
Trigger: GGGCTCCCAAGGCCACAGCCAGGAGCCCTCTCCAGG...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGCGGTGGCTCTGGCCTaGGCTTCCTGGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWAVALA*ASWAGP
Trigger: CGGGCCAGCCCAGGAAGCCCAGGCCAGAGCCACCGC...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGACACCTTATGGACCCTaGCGTAGGTCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRATPYGP*RRSGCT
Trigger: AGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGT...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTTGCGCGAGGACAGGCTaGCCGGGTCCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETCARTG*PGPASP
Trigger: TGGAGAAGCCGGACCCGGGCAGCCTGTCCTCGCGCA...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGACTGTCGGTGGAATTCTaGGCCCGCAGGAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRLSVEF*ARRKPT
Trigger: CGTGGGCTTCCTGCGGGCGCAGAATTCCACCGACAG...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAGTCAGCGTGCCGGCCTaGGCGTGCTCCTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GVSSGSTGVVVGGSGETGVSVPA*ACSFSS
Trigger: CGAGGAGAAGGAGCACGCGCAGGCCGGCACGCTGAC...TCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTGCGAGGCGGTCAGCGTaGCGGCCTGCGCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLARRSA*RPARAP
Trigger: AGGAGCACGCGCAGGCCGGCACGCTGACCGCCTCGC...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGCGAGGCGGTCAGCGTaGCGGCCTGCGCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLARRSA*RPARAP
Trigger: AGGAGCACGCGCAGGCCGGCACGCTGACCGCCTCGC...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAAGAACTCGTCGCGGCTaGTCAGGTAGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGRTRRG*SGRWPA
Trigger: AGCAGGCCATCTACCTGAGCAGCCGCGACGAGTTCT...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGAGGCATGAGAGCCTaGTGGGGGCCGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLGGMRA*WGPGEA
Trigger: GGCCTCCCCCGGCCCCCAGCAGGCTCTCATGCCTCC...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp CAGGCGAAACTGGAACTGGACTTCCTTGGCAGGGGTTGGGACGAGGGGGTGGGGCCAGGTAGTGGCGCGTaGAGTCAAACTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QAKLELDFLGRGWDEGVGPGSGA*SQTPSP
Trigger: TGGAGACGGAGTTTGACTCCACGCGCCACTACCTGG...CCCCACCCCCTCGTCCCAACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCTTGTCCTCCAGCTCTTaGTTGATCCTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LGPQAGPWKSSGWIRAECLSSSS*LILCSA
Trigger: GGCGCTGCAGAGGATCAACCAAGAGCTGGAGGACAA...GCACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGGGGCAGTAGAGAGCTaGGTCGCTGCAGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSGAVES*VAAVDV
Trigger: GACATCTACTGCAGCGACCCAGCTCTCTACTGCCCC...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAGGCTGCTCAGGTAGATaGCCTGCTGCGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRGCSGR*PAARRS
Trigger: TGACCGCCTCGCAGCAGGCCATCTACCTGAGCAGCC...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAGGTTCCCGCTCGGCTTaGCCCGCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GVSSGSTGVVVGGSGETGGSRSA*PAGSTG
Trigger: ACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACC...TCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACCTCACGGGCCGCCACTaGCCTCGAATGTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNLTGRH*PRMSSP
Trigger: CGGGGAGGACATTCGAGGCCAGTGGCGGCCCGTGAG...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGATGGCATAGAGGGGACTaGCACGGCCCTCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRWHRGD*HGPRPC
Trigger: ACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCA...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAGGAGGGTCAGGGTTTTaGGCCTGGGAGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRGGSGF*AWELAP
Trigger: TGGAGCCAGCTCCCAGGCCCAAAACCCTGACCCTCC...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGAAGGGGAGGAACGAGCGGAGCTGTGGTCACCTaGAGAGGGCTCCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LMSEVESGGVGRGRGGTSGAVVT*RGLLAV
Trigger: CACAGCCAGGAGCCCTCTCCAGGTGACCACAGCTCC...GCTCGTTCCTCCCCTTCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp TTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCTCCCCTTCCCTGCCTCCAGCTCTTGGTTaGTCCTCTGCAGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: FSPLVETGPSRVPASPSLPPALG*SSAAPC
Trigger: ACATGGCGCTGCAGAGGATCAACCAAGAGCTGGAGG...CAGGGAAGGGGAGGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGACGGAGGGCTTGCGGTTaGAGAACTCGTCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGRRACG*RTRRGC
Trigger: GCAGCCGCGACGAGTTCTTCAACCGCAAGCCCTCCG...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp GGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACAGGTTTGGAGGCATaGGAGCCTGCTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GVSSGSTGVVVGGSGETGTGLEA*EPAGGR
Trigger: CCGGCCCCCAGCAGGCTCTCATGCCTCCAAACCTGT...TCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR TCA 90 bp CAGGCGAAACTGGAACTGGACTTCCTTGGCAGGGGTTGGGACGAGGGGGTGGGGCTAGCACGCGAACAGTaGCCTCATCCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QAKLELDFLGRGWDEGVGLAREQ*PHPGTW
Trigger: CCAAGTTCCTGGATGAGGTCACTGTTCGCGTGCTAG...CCCCACCCCCTCGTCCCAACCCCTGCCAAGGAAGTCCAGTTCCAGTTTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGAGTTTCTCCATGTCTaGGGCAGAGGCCGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETEFLHV*GRGRPA
Trigger: CGCCGGGCGGCCTCTGCCGCAGACATGGAGAAACTC...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190647.3
CDS-3UTR GCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGCCGTAGGTCTGGCTaGACTGCAGCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNCRRSG*TAAAGP
Trigger: CGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCA...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAGGCAGGCTGCAGCCATaGTTCTCCATGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRGRLQP*FSMCRL
Trigger: GAGCCTGCACATGGAGAAGCATGGCTGCAGCCTGCC...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTGGCCGGATGGCACAGTaGGGACGGCAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLGRMAQ*GRQAAA
Trigger: GGCTGCAGCCTGCCGTCCGCACTGTGCCATCCGGCC...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGCCGGATGGCACAGTaGGGACGGCAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLGRMAQ*GRQAAA
Trigger: GGCTGCAGCCTGCCGTCCGCACTGTGCCATCCGGCC...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCGCGAGGACAGGCTaGCCGGGTCCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPCARTG*PGPASP
Trigger: TGGAGAAGCCGGACCCGGGCAGCCTGTCCTCGCGCA...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGAGAGCTGGGTCGCTaGAGTAGATGTCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRRELGR*SRCLPC
Trigger: ACAAGGGAGACATCTACTGCAGCGACCCAGCTCTCT...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGTCAGCGTGCCGGCCTaGGCGTGCTCCTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWVSVPA*ACSFSS
Trigger: CGAGGAGAAGGAGCACGCGCAGGCCGGCACGCTGAC...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAGGCGAGTGGGAGGGTaGATTTCAGGAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRRRVGG*ISGEAS
Trigger: GGAGGCCTCTCCTGAAATGCACCCTCCCACTCGCCT...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp CTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGAAGGGGAGGAACGAGCTGTGCTAGGGGATTCTaGTGGGGAAGGAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LMSEVESGGVGRGRGGTSCARGF*WGRRAW
Trigger: CCAGGCCCTCCTTCCCCAGCAGAATCCCCTAGCACA...GCTCGTTCCTCCCCTTCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGATTGTCCTCCAGCTCTTaGTTGATCCTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGLSSSS*LILCSA
Trigger: GGCGCTGCAGAGGATCAACCAAGAGCTGGAGGACAA...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTGGTTCCCGCTCGGCTTaGCCCGCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPGSRSA*PAGSTG
Trigger: ACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACC...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTTATCGGCCTTGTAGGTaGCATAGAGGGGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SWAHRPGHGKAQGGSGRSYRPCR*HRGDWH
Trigger: GTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATA...ACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCAGAGCCTCCAGTCCTTaGGAAGGCCTGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPARASSP*EGLLGA
Trigger: AGCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCT...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCTCCCCTTCCCTGTCAGGGTTTTGGGCCTaGGAGCTGGCTCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: FSPLVETGPSRVPASPSLSGFWA*ELAPVS
Trigger: GCTTACTGGAGCCAGCTCCCAGGCCCAAAACCCTGA...CAGGGAAGGGGAGGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAGCTAGGGGATTCTGCTaGGGAAGGAGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRARGFC*GRRAWT
Trigger: TGTCCAGGCCCTCCTTCCCCAGCAGAATCCCCTAGC...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGTGAAGCTGAAGCGGTGGCTCTaGCCTGGGCTTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCGVCQGCHPESSGKCVKLKRWL*PGLPGL
Trigger: CAGCCCAGGAAGCCCAGGCCAGAGCCACCGCTTCAG...CTTCACGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp CTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGAAGGGGAGGAACGAGCCACACAGCTGCACCCTaGGCCTATCTCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: LMSEVESGGVGRGRGGTSHTAAP*AYLHPH
Trigger: ATGGGGATGGAGATAGGCTCAGGGTGCAGCTGTGTG...GCTCGTTCCTCCCCTTCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGCTGGGCCGCTAGATTaGAGTCCTTCCTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGPTGRAMEKLRVDQGGAGPLD*SPSYRA
Trigger: AGCTCTATAGGAAGGACTGCAATCTAGCGGCCCAGC...TCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGTGCCGTAGGTCTGGCTaGACTGCAGCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWCRRSG*TAAAGP
Trigger: CGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCA...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTTGCGCGAGGACAGGCTaGCCGGGTCCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLCARTG*PGPASP
Trigger: TGGAGAAGCCGGACCCGGGCAGCCTGTCCTCGCGCA...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGTGCCGGCCTGCGCGTaGTCCTTCTCCTCGGACGTG +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLVPACA*SFSSDV
Trigger: CACGTCCGAGGAGAAGGAGCACGCGCAGGCCGGCAC...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACGGAGGCATGAGAGCCTaGTGGGGGCCGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDGGMRA*WGPGEA
Trigger: GGCCTCCCCCGGCCCCCAGCAGGCTCTCATGCCTCC...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCGGGCTCCGGGCTACTaGCAGCCCCACACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPRAPGY*QPHTAA
Trigger: TGCAGCTGTGTGGGGCTGGCAGTAGCCCGGAGCCCG...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCGGGCTCCGGGCTACTaGCAGCCCCACACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLRAPGY*QPHTAA
Trigger: TGCAGCTGTGTGGGGCTGGCAGTAGCCCGGAGCCCG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCAGGCGAGTGGGAGGGTaGATTTCAGGAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPARRVGG*ISGEAS
Trigger: GGAGGCCTCTCCTGAAATGCACCCTCCCACTCGCCT...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCGTCCTTGGGAAGGCCTaGTGGGGGCTGAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSVLGKA*WGLRRV
Trigger: CACTCGCCTCAGCCCCCAGCAGGCCTTCCCAAGGAC...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGTGAAGTCTGCGGCAGAGGCCTaGGGAGAGCAAAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SCGVCQGCHPESSGKCVKSAAEA*GEQRRG
Trigger: CCCTCTCCTTTGCTCTCCGCAGGCCTCTGCCGCAGA...CTTCACGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACAGGCTCACGCGCTGTTaGAAGTCCGAGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNRLTRC*KSEGSS
Trigger: CGAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCT...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp CTCATGTCTGAGGTAGAGTCAGGTGGTGTCGGGAGGGGAAGGGGAGGAACGAGCGGGGCAGTAGAGAGCTaGGTCGCTGCAGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: LMSEVESGGVGRGRGGTSGAVES*VAAVDV
Trigger: GACATCTACTGCAGCGACCCAGCTCTCTACTGCCCC...GCTCGTTCCTCCCCTTCCCCTCCCGACACCACCTGACTCTACCTCAGACATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGCTGCTCAGGTAGATaGCCTGCTGCGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETGCSGR*PAARRS
Trigger: TGACCGCCTCGCAGCAGGCCATCTACCTGAGCAGCC...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACAGAGCCTCCAGTCCTTaGGAAGGCCTGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNRASSP*EGLLGA
Trigger: AGCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCT...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR TCA 90 bp GACCTTCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGGTTCCTGGAGGGCACTaGGTTTCTCCATGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: DLHVGFAKAATQNLAASAVPGGH*VSPCLR
Trigger: CCGCAGACATGGAGAAACTCAGTGCCCTCCAGGAAC...CGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCGGAGGGCTTGCGGTTaGAGAACTCGTCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLRRACG*RTRRGC
Trigger: GCAGCCGCGACGAGTTCTTCAACCGCAAGCCCTCCG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR TCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGAGCTGTCCAGGCCCCTaGTGCCTGTGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWSCPGP*CLWLPR
Trigger: CCTTGGAAGCCACAGGCATCAGGGGCCTGGACAGCT...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTTGCCGTAGGTCTGGCTaGACTGCAGCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLCRRSG*TAAAGP
Trigger: CGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCA...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCCCATGCTTCTCCATGTaGAGGCTCACGCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPAPCFSM*RLTRCW
Trigger: CCAACAGCGCGTGAGCCTGCACATGGAGAAGCATGG...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACGTGCGGACGGCAGGCTaGAGCCATGCTTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNVRTAG*SHASPC
Trigger: ACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCAC...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACGGCCGGATGGCACAGTaGGGACGGCAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDGRMAQ*GRQAAA
Trigger: GGCTGCAGCCTGCCGTCCGCACTGTGCCATCCGGCC...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCCTGTCGGTGGAATTCTaGGCCCGCAGGAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSLSVEF*ARRKPT
Trigger: CGTGGGCTTCCTGCGGGCGCAGAATTCCACCGACAG...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTGTCCTTGGGAAGGCCTaGTGGGGGCTGAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPVLGKA*WGLRRV
Trigger: CACTCGCCTCAGCCCCCAGCAGGCCTTCCCAAGGAC...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp GACCTTCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGGAGTTTCTCCATGTCTaGGGCAGAGGCCTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: DLHVGFAKAATQNLAASAEFLHV*GRGLRR
Trigger: TCTCCGCAGGCCTCTGCCGCAGACATGGAGAAACTC...CGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGCAATCTCATGGCTCATaGCACGCTTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRAQSHGS*HASLPH
Trigger: ATGAGGAAGAGAAGCGTGCCATGAGCCATGAGATTG...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCAGGCTCACGCGCTGTTaGAAGTCCGAGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSRLTRC*KSEGSS
Trigger: CGAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCT...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCTTGGGAAGGCCTGCTaGGGGCTGAGGCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLLGKAC*GLRRVG
Trigger: TCCCACTCGCCTCAGCCCCCAGCAGGCCTTCCCAAG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCGGATACAGTGTTCTCTaGGCCCGTGCCGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSGYSVL*ARAGAL
Trigger: CAGAGCCCCGGCACGGGCCCAGAGAACACTGTATCC...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGTCCTGGCTGTGGCCTTaGGAGCCCCTGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLSWLWP*EPLKPS
Trigger: GGAGGGCTTCAGGGGCTCCCAAGGCCACAGCCAGGA...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGCCCCCGCTCAGGCTaGGGAAACGTGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLGPRSG*GNVLDL
Trigger: GAGATCCAGCACGTTTCCCCAGCCTGAGCGGGGGCC...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp TCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGTGAAGCACACAGCTGCACCCTaGGCCTATCTCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: SCGVCQGCHPESSGKCVKHTAAP*AYLHPH
Trigger: ATGGGGATGGAGATAGGCTCAGGGTGCAGCTGTGTG...CTTCACGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGTGAAGCCATGCTTCTCCATGTaGAGGCTCACGCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SCGVCQGCHPESSGKCVKPCFSM*RLTRCW
Trigger: CCAACAGCGCGTGAGCCTGCACATGGAGAAGCATGG...CTTCACGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACCCATGCTTCTCCATGTaGAGGCTCACGCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNPCFSM*RLTRCW
Trigger: CCAACAGCGCGTGAGCCTGCACATGGAGAAGCATGG...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTGTGCGGACGGCAGGCTaGAGCCATGCTTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPVRTAG*SHASPC
Trigger: ACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCAC...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTAGAACTCGTCGCGGCTaGTCAGGTAGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETRTRRG*SGRWPA
Trigger: AGCAGGCCATCTACCTGAGCAGCCGCGACGAGTTCT...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGCTGCACTGCAGCAGCTaGGCCGCTAGATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWLHCSS*AARLQS
Trigger: GGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAG...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACGGGGCAGTAGAGAGCTaGGTCGCTGCAGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: RGGLFRFYWGGSRRVRRNGAVES*VAAVDV
Trigger: GACATCTACTGCAGCGACCCAGCTCTCTACTGCCCC...GTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGACAGGCTCCACAGGTTTaGAGGCATGAGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GVSSGSTGVVVGGSGETGQAPQV*RHESLL
Trigger: CAGCAGGCTCTCATGCCTCCAAACCTGTGGAGCCTG...TCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGTGGCATAGAGGGGACTaGCACGGCCCTCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLWHRGD*HGPRPC
Trigger: ACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCA...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTGTGGGCTTCCTTCCTaGAAGGCAGGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSCGLPS*KAGGSW
Trigger: CCAGCTCCCTCCTGCCTTCCAGGAAGGAAGCCCACA...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTCTCCTCTGAAGCGGTaGCTCTGGCCTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPSPLKR*LWPGLP
Trigger: AGGAAGCCCAGGCCAGAGCCACCGCTTCAGAGGAGA...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
3UTR CAA 72 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTaGTGGAGACTGGTCCCTCTAGGGTCCCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: FPLVPLFLASPL*WRLVPLGSQPP
Trigger: GGGAGGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCGTTCCTGGAGGGCACTaGGTTTCTCCATGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSVPGGH*VSPCLR
Trigger: CCGCAGACATGGAGAAACTCAGTGCCCTCCAGGAAC...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR TCA 90 bp TCATGTGGGGTTTGCCAAGGCTGCCACCCAGAATCTAGCGGCAAGTGCGTGAAGGAATGCCAGGGACTCTaGGACAGGTCCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCGVCQGCHPESSGKCVKECQGL*DRSFSS
Trigger: AGAGGAGAAGGACCTGTCTCAGAGTCCCTGGCATTC...CTTCACGCACTTGCCGCTAGATTCTGGGTGGCAGCCTTGGCAAACCCCACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTGTAGGAGAGCCGCTTaGGCAGCTCGCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSCRRAA*AARPSV
Trigger: AACAGAAGGGCGAGCTGCGCAAGCGGCTCTCCTACA...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGTGTAGGAGAGCCGCTTaGGCAGCTCGCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWCRRAA*AARPSV
Trigger: AACAGAAGGGCGAGCTGCGCAAGCGGCTCTCCTACA...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTACACCTTATGGACCCTaGCGTAGGTCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETTPYGP*RRSGCT
Trigger: AGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGT...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTGTGCGGACGGCAGGCTaGAGCCATGCTTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPVRTAG*SHASPC
Trigger: ACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCAC...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGAGGCGAGTGGGAGGGTaGATTTCAGGAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLRRVGG*ISGEAS
Trigger: GGAGGCCTCTCCTGAAATGCACCCTCCCACTCGCCT...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCAGGGCGACAATCTCATaGCTCATGGCACGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVSGFSPLVETGPSRVPARATIS*LMARFS
Trigger: AGAGAAGCGTGCCATGAGCCATGAGATTGTCGCCCT...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCCAGGCTCCACAGGTTTaGAGGCATGAGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSQAPQV*RHESLL
Trigger: CAGCAGGCTCTCATGCCTCCAAACCTGTGGAGCCTG...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTTATCGGCCTTGTAGGTaGCATAGAGGGGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETYRPCR*HRGDWH
Trigger: GTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATA...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTCTATCTGTCCAGAGCTaGGAGGGTCAGGGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETLSVQS*EGQGFG
Trigger: CCCAAAACCCTGACCCTCCCAGCTCTGGACAGATAG...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGAAAGGCAGGAGGGAGCTaGAAGCTATCTGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGKAGGS*KLSVQS
Trigger: GCTCTGGACAGATAGCTTCCAGCTCCCTCCTGCCTT...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR TCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCACACAGCTGCACCCTaGGCCTATCTCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLHTAAP*AYLHPH
Trigger: ATGGGGATGGAGATAGGCTCAGGGTGCAGCTGTGTG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGAGCTGGGCCGCTAGATTaGAGTCCTTCCTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGAGPLD*SPSYRA
Trigger: AGCTCTATAGGAAGGACTGCAATCTAGCGGCCCAGC...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGAAGAGAGCTGGGTCGCTaGAGTAGATGTCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGRELGR*SRCLPC
Trigger: ACAAGGGAGACATCTACTGCAGCGACCCAGCTCTCT...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCAGGTAGTGGCGCGTaGAGTCAAACTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLPGSGA*SQTPSP
Trigger: TGGAGACGGAGTTTGACTCCACGCGCCACTACCTGG...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCCAGGTAGTGGCGCGTaGAGTCAAACTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLPGSGA*SQTPSP
Trigger: TGGAGACGGAGTTTGACTCCACGCGCCACTACCTGG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACAGGCTCACGCGCTGTTaGAAGTCCGAGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDRLTRC*KSEGSS
Trigger: CGAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCT...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGCATAGAGGGGACTaGCACGGCCCTCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDWHRGD*HGPRPC
Trigger: ACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCA...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTATCGGCCTTGTAGGTaGCATAGAGGGGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPYRPCR*HRGDWH
Trigger: GTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATA...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGCAGCGCCATGTAGTTaGTCTGAATCCTGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWAAPCS*SESCAV
Trigger: AACTGCGCAGGATTCAGAGCAACTACATGGCGCTGC...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCGCTGGGCCGCTAGATTaGAGTCCTTCCTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSAGPLD*SPSYRA
Trigger: AGCTCTATAGGAAGGACTGCAATCTAGCGGCCCAGC...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGAGAGAGCTGGGTCGCTaGAGTAGATGTCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWRELGR*SRCLPC
Trigger: ACAAGGGAGACATCTACTGCAGCGACCCAGCTCTCT...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGAGGGCGACAATCTCATaGCTCATGGCACGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: STGVVVGGSGETGTGLPWRATIS*LMARFS
Trigger: AGAGAAGCGTGCCATGAGCCATGAGATTGTCGCCCT...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCACCTGCTTCCCAGCTTaGGTGGGATACAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSTCFPA*VGYSVL
Trigger: GAGAACACTGTATCCCACCCAAGCTGGGAAGCAGGT...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
3UTR CAA 72 bp CCCCTCCTCAGTGTACAGAACTTCCCACTTGTTCCCTaGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: PLLSVQNFPLVP*FLASPLLWRLV
Trigger: GACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTACACTGAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR GCA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTGCAGCGCCATGTAGTTaGTCTGAATCCTGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPAAPCS*SESCAV
Trigger: AACTGCGCAGGATTCAGAGCAACTACATGGCGCTGC...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTCAATCTCATGGCTCATaGCACGCTTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETQSHGS*HASLPH
Trigger: ATGAGGAAGAGAAGCGTGCCATGAGCCATGAGATTG...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CCA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTAGGGCGACAATCTCATaGCTCATGGCACGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLRATIS*LMARFS
Trigger: AGAGAAGCGTGCCATGAGCCATGAGATTGTCGCCCT...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR GCA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACACACCTTATGGACCCTaGCGTAGGTCTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDTPYGP*RRSGCT
Trigger: AGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGT...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCCTCATCCAGGAACTTaGAGAAAGGCATCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPPHPGT*RKASWL
Trigger: AAGCCAGGATGCCTTTCTCCAAGTTCCTGGATGAGG...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CCA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCAATCTCATGGCTCATaGCACGCTTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLQSHGS*HASLPH
Trigger: ATGAGGAAGAGAAGCGTGCCATGAGCCATGAGATTG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
3UTR CAA 72 bp CTTTGGTTCCCCTCCTCAGTGTACAGAACTTCCCACTaGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LWFPSSVYRTSH*FPCFWLLPSCG
Trigger: TCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTACACTGAGGAGGGGAACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS CCA 90 bp GGGCGACCTGGGCCTCCAGCGGGGAGCCCAGGGTGGACGCGGCCTTaGCGAAGCGAGGGCCGCTGCCGTAGGTGGCGGAGGGCTTGCGGT +
Preference number: 5 (lower is better)
Translates to: GRPGPPAGSPGWTRP*RSEGRCRRWRRACG
Trigger: ACCGCAAGCCCTCCGCCACCTACGGCAGCGGCCCTCGCTTCGCCAAGGCCGCGTCCACCCTGGGCTCCCCGCTGGAGGCCCAGGTCGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp GAGCAAAGCCTGGGGCGACCTGGGCCTCCAGCGGGGAGCCCAGGGTaGACGCGGCCTTGGCGAAGCGAGGGCCGCTGCCGTAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: EQSLGRPGPPAGSPG*TRPWRSEGRCRRWR
Trigger: CCGCCACCTACGGCAGCGGCCCTCGCTTCGCCAAGGCCGCGTCCACCCTGGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTTTGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp GCGGTAGGGCTCGGCCGGGTACGGAGACACAGTCCGAGCAAAGCCTaGGGCGACCTGGGCCTCCAGCGGGGAGCCCAGGGTGGACGCGGC +
Preference number: 5 (lower is better)
Translates to: AVGLGRVRRHSPSKA*GDLGLQRGAQGGRG
Trigger: GCCGCGTCCACCCTGGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTTTGCTCGGACTGTGTCTCCGTACCCGGCCGAGCCCTACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp TCTGCGCCCGCAGGAAGCCCACGTCGGTCACCGGCGTGTCCACGCTaGGTCGCCGGGCGTGCTCCCGCTCGTCGGGGCAGTAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SAPAGSPRRSPACPR*VAGRAPARRGSREL
Trigger: CAGCTCTCTACTGCCCCGACGAGCGGGAGCACGCCCGGCGACCCAGCGTGGACACGCCGGTGACCGACGTGGGCTTCCTGCGGGCGCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp GGCAAGCCGGTTCCCGCTCGGCTTGGCCCGCAGGCTCCACAGGTTTaGAGGCATGAGAGCCTGCTGGGGGCCGGGGGAGGCCGGGTAGCG +
Preference number: 5 (lower is better)
Translates to: GKPVPARLGPQAPQV*RHESLLGAGGGRVA
Trigger: CGCTACCCGGCCTCCCCCGGCCCCCAGCAGGCTCTCATGCCTCCAAACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACCGGCTTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp TCGGCCGGGTACGGAGACACAGTCCGAGCAAAGCCTGGGGCGACCTaGGCCTCCAGCGGGGAGCCCAGGGTGGACGCGGCCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SAGYGDTVRAKPGAT*ASSGEPRVDAALAK
Trigger: CTTCGCCAAGGCCGCGTCCACCCTGGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTTTGCTCGGACTGTGTCTCCGTACCCGGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp CCACTCCGTCGCGGTAGCCCAGGTCGCGGGCCGAGGCATCCGACATaGGCGAGGACAGGCTGCCCGGGTCCGGCTTCTCCAGCACTTTGG +
Preference number: 5 (lower is better)
Translates to: PLRRGSPGRGPRHPT*ARTGCPGPASPALW
Trigger: CCAAAGTGCTGGAGAAGCCGGACCCGGGCAGCCTGTCCTCGCGCATGTCGGATGCCTCGGCCCGCGACCTGGGCTACCGCGACGGAGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp CGCCCTCCGAGAAACTATCGGCCTTGTAGGTGGCATAGAGGGGACTaGCACGGCCCTCGGCCTTGTCGCCGGGGCTGCCGCCGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: RPPRNYRPCRWHRGD*HGPRPCRRGCRRQR
Trigger: CCGCTGGCGGCGGCAGCCCCGGCGACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATAGTTTCTCGGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp GGCTCTGGCCTGGGCTTCCTGGGCTGGCCCGGAGCTGTGGTCACCTaGAGAGGGCTCCTGGCTGTGGCCTTGGGAGCCCCTGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GSGLGFLGWPGAVVT*RGLLAVALGAPEAL
Trigger: GAGGGCTTCAGGGGCTCCCAAGGCCACAGCCAGGAGCCCTCTCCAGGTGACCACAGCTCCGGGCCAGCCCAGGAAGCCCAGGCCAGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS CCA 90 bp GAAGCGGTGGCTCTGGCCTGGGCTTCCTGGGCTGGCCCGGAGCTGTaGTCACCTGGAGAGGGCTCCTGGCTGTGGCCTTGGGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: EAVALAWASWAGPEL*SPGEGSWLWPWEPL
Trigger: CAGGGGCTCCCAAGGCCACAGCCAGGAGCCCTCTCCAGGTGACCACAGCTCCGGGCCAGCCCAGGAAGCCCAGGCCAGAGCCACCGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS TCA 90 bp TCAGCGTGCCGGCCTGCGCGTGCTCCTTCTCCTCGGACGTGGCGCTaGAGCTGGAGTAGGAGCTGGAGGTGGGCAGCGAGGCCGCGTAGC +
Preference number: 5 (lower is better)
Translates to: SACRPARAPSPRTWR*SWSRSWRWAARPRS
Trigger: GCTACGCGGCCTCGCTGCCCACCTCCAGCTCCTACTCCAGCTTCAGCGCCACGTCCGAGGAGAAGGAGCACGCGCAGGCCGGCACGCTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp GCCGGGCGTGCTCCCGCTCGTCGGGGCAGTAGAGAGCTGGGTCGCTaGAGTAGATGTCTCCCTTGTACGGGGGCCGCGGGCCCGACTTCT +
Preference number: 5 (lower is better)
Translates to: AGRAPARRGSRELGR*SRCLPCTGAAGPTS
Trigger: AGAAGTCGGGCCCGCGGCCCCCGTACAAGGGAGACATCTACTGCAGCGACCCAGCTCTCTACTGCCCCGACGAGCGGGAGCACGCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGCGGTTCCCGCTCGGCTaGGCCCGCAGGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRRFPLG*ARRLHR
Trigger: CCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACCG...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS TCA 90 bp GCGAGGACAGGCTGCCCGGGTCCGGCTTCTCCAGCACTTTGGCGATaGCGCAGGTGGGCACGCTGTCGGCGTAGGCCGGATGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: ARTGCPGPASPALWR*RRWARCRRRPDGTV
Trigger: CACTGTGCCATCCGGCCTACGCCGACAGCGTGCCCACCTGCGTCATCGCCAAAGTGCTGGAGAAGCCGGACCCGGGCAGCCTGTCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS TCA 90 bp TGGCGAAGCGAGGGCCGCTGCCGTAGGTGGCGGAGGGCTTGCGGTTaGAGAACTCGTCGCGGCTGCTCAGGTAGATGGCCTGCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: WRSEGRCRRWRRACG*RTRRGCSGRWPAAR
Trigger: CCTCGCAGCAGGCCATCTACCTGAGCAGCCGCGACGAGTTCTTCAACCGCAAGCCCTCCGCCACCTACGGCAGCGGCCCTCGCTTCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp GATGACGCAGGTGGGCACGCTGTCGGCGTAGGCCGGATGGCACAGTaGGGACGGCAGGCTGCAGCCATGCTTCTCCATGTGCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: DDAGGHAVGVGRMAQ*GRQAAAMLLHVQAH
Trigger: GTGAGCCTGCACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCACTGTGCCATCCGGCCTACGCCGACAGCGTGCCCACCTGCGTCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp TGTTCCTGGAGGGCACTGAGTTTCTCCATGTCTGCGGCAGAGGCCTaGGGAGAGCAAAGGAGAGGGTCAGCGCGCAGCAGGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: CSWRALSFSMSAAEA*GEQRRGSARSRAPR
Trigger: GCGGGGCGCCCTGCTGCGCGCTGACCCTCTCCTTTGCTCTCCGCAGGCCTCTGCCGCAGACATGGAGAAACTCAGTGCCCTCCAGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS CCA 90 bp GCCAGGGACTCTGAGACAGGTCCTTCTCCTCTGAAGCGGTGGCTCTaGCCTGGGCTTCCTGGGCTGGCCCGGAGCTGTGGTCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: ARDSETGPSPLKRWL*PGLPGLARSCGHLE
Trigger: CTCCAGGTGACCACAGCTCCGGGCCAGCCCAGGAAGCCCAGGCCAGAGCCACCGCTTCAGAGGAGAAGGACCTGTCTCAGAGTCCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS TCA 90 bp CACTGGCTGCATAGCCAGCGAGCGCATCAGCCGAACGACTGGGACTaGGGCTCAGATCGCCACCTGCTCGGAGGAAGCAGGGCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: HWLHSQRAHQPNDWD*GSDRHLLGGSRARP
Trigger: TGGCCGAGCCCTGCTTCCTCCGAGCAGGTGGCGATCTGAGCCTCAGTCCCAGTCGTTCGGCTGATGCGCTCGCTGGCTATGCAGCCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS TCA 90 bp CATGCTCGGGCTCCGGGCTACTGCCAGCCCCACACAGCTGCACCCTaGGCCTATCTCCATCCCCATCACTGGCTGCATAGCCAGCGAGCG +
Preference number: 5 (lower is better)
Translates to: HARAPGYCQPHTAAP*AYLHPHHWLHSQRA
Trigger: CGCTCGCTGGCTATGCAGCCAGTGATGGGGATGGAGATAGGCTCAGGGTGCAGCTGTGTGGGGCTGGCAGTAGCCCGGAGCCCGAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp GGATGGCACAGTGCGGACGGCAGGCTGCAGCCATGCTTCTCCATGTaGAGGCTCACGCGCTGTTGGAAGTCCGAGGGCAGCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: GWHSADGRLQPCFSM*RLTRCWKSEGSSDT
Trigger: GGTGTCCGAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCTGCACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCACTGTGCCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp CTGTCCTTACGGCTCAGCCCAGAGCCTCCAGTCCTTGGGAAGGCCTaGTGGGGGCTGAGGCGAGTGGGAGGGTGCATTTCAGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LSLRLSPEPPVLGKA*WGLRRVGGCISGEA
Trigger: GGCCTCTCCTGAAATGCACCCTCCCACTCGCCTCAGCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCTGGGCTGAGCCGTAAGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp CCTGAGACAGGTCATCGCCCTCCGAGAAACTATCGGCCTTGTAGGTaGCATAGAGGGGACTGGCACGGCCCTCGGCCTTGTCGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: PETGHRPPRNYRPCR*HRGDWHGPRPCRRG
Trigger: GCCCCGGCGACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATAGTTTCTCGGAGGGCGATGACCTGTCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp CGCGCTGTTGGAAGTCCGAGGGCAGCTCGGACACCTTATGGACCCTaGCGTAGGTCTGGCTGCACTGCAGCAGCTGGGCCGCTAGATTGC +
Preference number: 5 (lower is better)
Translates to: RAVGSPRAARTPYGP*RRSGCTAAAGPLDC
Trigger: GCAATCTAGCGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGTCCGAGCTGCCCTCGGACTTCCAACAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 90 bp GAGCGCATCAGCCGAACGACTGGGACTGAGGCTCAGATCGCCACCTaGTCGGAGGAAGCAGGGCTCGGCCAGATGACCCTGAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: ERISRTTGTEAQIAT*SEEAGLGQMTLRQV
Trigger: GACCTGTCTCAGGGTCATCTGGCCGAGCCCTGCTTCCTCCGAGCAGGTGGCGATCTGAGCCTCAGTCCCAGTCGTTCGGCTGATGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTCGGTTCCCGCTCGGCTaGGCCCGCAGGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETRFPLG*ARRLHR
Trigger: CCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACCG...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp GCCAGAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGACAGAGCCTCCAGTCCTaGGGAAGGCCTGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ARGGLFRFYWGGSRRVRRQSLQS*GRPAGG
Trigger: GCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCTG...TCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp CTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTGCCCATCCGGTACAGCTaGTCCTCCAGCTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LGPTGRAMEKLRVDQGGVPIRYS*SSSSWL
Trigger: CAACCAAGAGCTGGAGGACAAGCTGTACCGGATGGG...CACTCCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp CCTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGCCCATCCGGTACAGCTaGTCCTCCAGCTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: PLLGPQAGPWKSSGWIRAPIRYS*SSSSWL
Trigger: CAACCAAGAGCTGGAGGACAAGCTGTACCGGATGGG...CGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCTCCCCTTCCCTGGGCTTCTCCAGCACTTaGGCGATGACGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: FSPLVETGPSRVPASPSLGFSST*AMTQVG
Trigger: GCCCACCTGCGTCATCGCCAAAGTGCTGGAGAAGCC...CAGGGAAGGGGAGGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS GCA 90 bp CCCACACAGCTGCACCCTGAGCCTATCTCCATCCCCATCACTGGCTaGATAGCCAGCGAGCGCATCAGCCGAACGACTGGGACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PTQLHPEPISIPITG*IASERISRTTGTEA
Trigger: AGCCTCAGTCCCAGTCGTTCGGCTGATGCGCTCGCTGGCTATGCAGCCAGTGATGGGGATGGAGATAGGCTCAGGGTGCAGCTGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp CACCTCAGTGTCCTAGCCTTACAGCCACCTGCTTCCCAGCTTGGGTaGGATACAGTGTTCTCTGGGCCCGTGCCGGGGCTCTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: HLSVLALQPPASQLG*DTVFSGPVPGLCVW
Trigger: CCACACACAGAGCCCCGGCACGGGCCCAGAGAACACTGTATCCCACCCAAGCTGGGAAGCAGGTGGCTGTAAGGCTAGGACACTGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp CTCTCTTGGGCCCACAGGCCGGGCCATGGAAAAGCTCAGGGTGGATCAGGGCGGAGTTTCTCCGTCACCTaGTCTAGCTCCTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSWAHRPGHGKAQGGSGRSFSVT*SSSSWA
Trigger: TGCCCAGGAGGAGCTAGACAAGGTGACGGAGAAACT...CCGCCCTGATCCACCCTGAGCTTTTCCATGGCCCGGCCTGTGGGCCCAAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCGGTTCCCGCTCGGCTaGGCCCGCAGGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: SGSTGVVVGGSGETGTGLRFPLG*ARRLHR
Trigger: CCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACCG...AAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS GCA 90 bp CCGAGGGCAGCTCGGACACCTTATGGACCCTGCCGTAGGTCTGGCTaGACTGCAGCAGCTGGGCCGCTAGATTGCAGTCCTTCCTATAGA +
Preference number: 5 (lower is better)
Translates to: PRAARTPYGPCRRSG*TAAAGPLDCSPSYR
Trigger: TCTATAGGAAGGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGTCCGAGCTGCCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp TGGACACCTCAGTGTCCTAGCCTTACAGCCACCTGCTTCCCAGCTTaGGTGGGATACAGTGTTCTCTGGGCCCGTGCCGGGGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: WTPQCPSLTATCFPA*VGYSVLWARAGALC
Trigger: ACACAGAGCCCCGGCACGGGCCCAGAGAACACTGTATCCCACCCAAGCTGGGAAGCAGGTGGCTGTAAGGCTAGGACACTGAGGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS CCA 90 bp GTGACCTCATCCAGGAACTTGGAGAAAGGCATCCTGGCTTCCCGCTaGCGGCTCAAGCGGGCAAGGGATCCCCCAGCAAGCTTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VTSSRNLEKGILASR*RLKRARDPPASLQL
Trigger: AAGCTGCAAGCTTGCTGGGGGATCCCTTGCCCGCTTGAGCCGCCAGCGGGAAGCCAGGATGCCTTTCTCCAAGTTCCTGGATGAGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCTCCCCTTCCCTGTCCAGCAGGTGGCTGTaGAGGGCGACAATCTCATGG +
Preference number: 5 (lower is better)
Translates to: FSPLVETGPSRVPASPSLSSRWL*RATISW
Trigger: CCATGAGATTGTCGCCCTCAACAGCCACCTGCTGGA...CAGGGAAGGGGAGGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp GGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGACAGGCTCACGCGCTGTaGGAAGTCCGAGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GVSSGSTGVVVGGSGETGQAHAL*EVRGQL
Trigger: GAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCTG...TCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS CCA 90 bp GCTCCTCCTGGGCACGCCTCAGCTCAATCTCCAGGTAGTGGCGCGTaGAGTCAAACTCCGTCTCCAGCTTCTCCAGCTTATGCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: APPGHASAQSPGSGA*SQTPSPASPAYAWC
Trigger: ACACCACGCATAAGCTGGAGAAGCTGGAGACGGAGTTTGACTCCACGCGCCACTACCTGGAGATTGAGCTGAGGCGTGCCCAGGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000185745.2
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp AAGGGATCCCCCAGCAAGCTTGCAGCTTGTGCTAGGGGATTCTGCTaGGGAAGGAGGGCCTGGACACCTCAGTGTCCTAGCCTTACAGCC +
Preference number: 5 (lower is better)
Translates to: KGSPSKLAACARGFC*GRRAWTPQCPSLTA
Trigger: GGCTGTAAGGCTAGGACACTGAGGTGTCCAGGCCCTCCTTCCCCAGCAGAATCCCCTAGCACAAGCTGCAAGCTTGCTGGGGGATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGCAGGCTCACGCGCTGTaGGAAGTCCGAGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: STGVVVGGSGETGTGLPWQAHAL*EVRGQL
Trigger: GAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCTG...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp TTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCAGAGCCTCCAGTCCTaGGGAAGGCCTGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: FPLVPLFLASPLLWRLVPQSLQS*GRPAGG
Trigger: GCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCTG...AGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS GCA 90 bp CCCTGCCGTAGGTCTGGCTGCACTGCAGCAGCTGGGCCGCTAGATTaGAGTCCTTCCTATAGAGCTCGTTGTCCTCCGACAGCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: PCRRSGCTAAAGPLD*SPSYRARCPPTACQ
Trigger: TTGACAAGCTGTCGGAGGACAACGAGCTCTATAGGAAGGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 90 bp AGGGAGCTGGAAGCTATCTGTCCAGAGCTGGGAGGGTCAGGGTTTTaGGCCTGGGAGCTGGCTCCAGTAAGCATCCTTCTCAGGCGTTCT +
Preference number: 5 (lower is better)
Translates to: RELEAICPELGGSGF*AWELAPVSILLRRS
Trigger: AGAACGCCTGAGAAGGATGCTTACTGGAGCCAGCTCCCAGGCCCAAAACCCTGACCCTCCCAGCTCTGGACAGATAGCTTCCAGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp CTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACTGGTCCCTCTAGGGTCCCAGCCCTTGTCCTCCAGCTCTaGGTTGATCCTCTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: LVSGFSPLVETGPSRVPALVLQL*VDPLQR
Trigger: GCGCTGCAGAGGATCAACCAAGAGCTGGAGGACAAG...GGCTGGGACCCTAGAGGGACCAGTCTCCACAAGAGGGGAGAAGCCAGAAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGCAGGCTCACGCGCTGTaGGAAGTCCGAGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLQAHAL*EVRGQL
Trigger: GAGCTGCCCTCGGACTTCCAACAGCGCGTGAGCCTG...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS CCA 90 bp CTGGAAGCTATCTGTCCAGAGCTGGGAGGGTCAGGGTTTTGGGCCTaGGAGCTGGCTCCAGTAAGCATCCTTCTCAGGCGTTCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: LEAICPELGGSGFWA*ELAPVSILLRRSSV
Trigger: GACACTAGAACGCCTGAGAAGGATGCTTACTGGAGCCAGCTCCCAGGCCCAAAACCCTGACCCTCCCAGCTCTGGACAGATAGCTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGGCTTCTCCAGCACTTaGGCGATGACGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLGFSST*AMTQVG
Trigger: GCCCACCTGCGTCATCGCCAAAGTGCTGGAGAAGCC...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACCAGAGCCTCCAGTCCTaGGGAAGGCCTGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDQSLQS*GRPAGG
Trigger: GCCCCCAGCAGGCCTTCCCAAGGACTGGAGGCTCTG...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGAAGTTTCTCCGTCACCTaGTCTAGCTCCTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGSFSVT*SSSSWA
Trigger: TGCCCAGGAGGAGCTAGACAAGGTGACGGAGAAACT...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp GAGGGGGTCTCTTCAGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTAGTTTCTCCGTCACCTaGTCTAGCTCCTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: EGVSSGSTGVVVGGSGETSFSVT*SSSSWA
Trigger: TGCCCAGGAGGAGCTAGACAAGGTGACGGAGAAACT...AGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCTGAAGAGACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTCTTGTCCTCCAGCTCTaGGTTGATCCTCTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPLVLQL*VDPLQR
Trigger: GCGCTGCAGAGGATCAACCAAGAGCTGGAGGACAAG...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp AGGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCCCCATCCGGTACAGCTaGTCCTCCAGCTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: RFYWGGSRRVRRNWNWTSPIRYS*SSSSWL
Trigger: CAACCAAGAGCTGGAGGACAAGCTGTACCGGATGGG...GGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGTCCAGCAGGTGGCTGTaGAGGGCGACAATCTCATGG +
Preference number: 5 (lower is better)
Translates to: STGVVVGGSGETGTGLPWSSRWL*RATISW
Trigger: CCATGAGATTGTCGCCCTCAACAGCCACCTGCTGGA...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS CCA 90 bp TTGTCCTCCGACAGCTTGTCAATGGTCACCTTAGCCTCCAGCAGGTaGCTGTTGAGGGCGACAATCTCATGGCTCATGGCACGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LSSDSLSMVTLASSR*LLRATISWLMARFS
Trigger: AGAGAAGCGTGCCATGAGCCATGAGATTGTCGCCCTCAACAGCCACCTGCTGGAGGCTAAGGTGACCATTGACAAGCTGTCGGAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp TTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGTCCAGCAGGTGGCTGTaGAGGGCGACAATCTCATGG +
Preference number: 5 (lower is better)
Translates to: FYWGGSRRVRRNWNWTSLSSRWL*RATISW
Trigger: CCATGAGATTGTCGCCCTCAACAGCCACCTGCTGGA...CAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp AGAGACTGGCATGCATCACAGAAGACAGGTTCACAGGGGTGGGAGGAGGGAGGATTGTCCTCCGACAGCTaGTCAATGGTCACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: RDWHASQKTGSQGWEEGGLSSDS*SMVTLA
Trigger: GGCTAAGGTGACCATTGACAAGCTGTCGGAGGACAA...TCCTCCCTCCTCCCACCCCTGTGAACCTGTCTTCTGTGATGCATGCCAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TACAGAACTTCCCACTTGTTCCCTTGTTTCTGGCTTCTCCCCTCTTGTGGAGACGGCTTCTCCAGCACTTaGGCGATGACGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: YRTSHLFPCFWLLPSCGDGFSST*AMTQVG
Trigger: GCCCACCTGCGTCATCGCCAAAGTGCTGGAGAAGCC...GTCTCCACAAGAGGGGAGAAGCCAGAAACAAGGGAACAAGTGGGAAGTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
CDS-3UTR CAA 90 bp TCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTGGTTGTCCTCCGACAGCTaGTCAATGGTCACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: STGVVVGGSGETGTGLPWLSSDS*SMVTLA
Trigger: GGCTAAGGTGACCATTGACAAGCTGTCGGAGGACAA...CCAAGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS-3UTR CAA 90 bp GGTTCTACTGGGGTGGTAGTAGGAGGGTCAGGCGAAACTGGAACTGGACTTCCTTTGTCCTCCGACAGCTaGTCAATGGTCACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: GSTGVVVGGSGETGTGLPLSSDS*SMVTLA
Trigger: GGCTAAGGTGACCATTGACAAGCTGTCGGAGGACAA...AGGAAGTCCAGTTCCAGTTTCGCCTGACCCTCCTACTACCACCCCAGTAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000239108.2
CDS CCA 72 bp GGGCCTCCAGCGGGGAGCCCAGGGTGGACGCGGCCTTaGCGAAGCGAGGGCCGCTGCCGTAGGTGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: GPPAGSPGWTRP*RSEGRCRRWRR
Trigger: CCTCCGCCACCTACGGCAGCGGCCCTCGCTTCGCCAAGGCCGCGTCCACCCTGGGCTCCCCGCTGGAGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp GCAGGAAGCCCACGTCGGTCACCGGCGTGTCCACGCTaGGTCGCCGGGCGTGCTCCCGCTCGTCGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: AGSPRRSPACPR*VAGRAPARRGS
Trigger: ACTGCCCCGACGAGCGGGAGCACGCCCGGCGACCCAGCGTGGACACGCCGGTGACCGACGTGGGCTTCCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp CGCGGTAGCCCAGGTCGCGGGCCGAGGCATCCGACATaGGCGAGGACAGGCTGCCCGGGTCCGGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: RGSPGRGPRHPT*ARTGCPGPASP
Trigger: TGGAGAAGCCGGACCCGGGCAGCCTGTCCTCGCGCATGTCGGATGCCTCGGCCCGCGACCTGGGCTACCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp CGCGCAGCAGGGCGCCCCGCTGGCCCCCGCTCAGGCTaGGGAAACGTGCTGGATCTCCCTGCTCGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RAAGRPAGPRSG*GNVLDLPARSC
Trigger: ACAGCTGCGAGCAGGGAGATCCAGCACGTTTCCCCAGCCTGAGCGGGGGCCAGCGGGGCGCCCTGCTGCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS GCA 72 bp GCCTGCTGCGAGGCGGTCAGCGTGCCGGCCTGCGCGTaGTCCTTCTCCTCGGACGTGGCGCTGAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: ACCEAVSVPACA*SFSSDVALKLE
Trigger: CTCCAGCTTCAGCGCCACGTCCGAGGAGAAGGAGCACGCGCAGGCCGGCACGCTGACCGCCTCGCAGCAGGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp CTCGGCCGGGTACGGAGACACAGTCCGAGCAAAGCCTaGGGCGACCTGGGCCTCCAGCGGGGAGCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LGRVRRHSPSKA*GDLGLQRGAQG
Trigger: ACCCTGGGCTCCCCGCTGGAGGCCCAGGTCGCCCCAGGCTTTGCTCGGACTGTGTCTCCGTACCCGGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp GTTCCCGCTCGGCTTGGCCCGCAGGCTCCACAGGTTTaGAGGCATGAGAGCCTGCTGGGGGCCGGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: VPARLGPQAPQV*RHESLLGAGGG
Trigger: GCCTCCCCCGGCCCCCAGCAGGCTCTCATGCCTCCAAACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp GCTCTGGCCTGGGCTTCCTGGGCTGGCCCGGAGCTGTaGTCACCTGGAGAGGGCTCCTGGCTGTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: ALAWASWAGPEL*SPGEGSWLWPW
Trigger: CCAAGGCCACAGCCAGGAGCCCTCTCCAGGTGACCACAGCTCCGGGCCAGCCCAGGAAGCCCAGGCCAGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS TCA 72 bp GGCTGCCCGGGTCCGGCTTCTCCAGCACTTTGGCGATaGCGCAGGTGGGCACGCTGTCGGCGTAGGCCGGAT +
Preference number: 6 (lower is better)
Translates to: GCPGPASPALWR*RRWARCRRRPD
Trigger: ATCCGGCCTACGCCGACAGCGTGCCCACCTGCGTCATCGCCAAAGTGCTGGAGAAGCCGGACCCGGGCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp TCTTCCTCCTCCTCCGCCGCGCTGTCGGTGGAATTCTaGGCCCGCAGGAAGCCCACGTCGGTCACCGGCGTG +
Preference number: 6 (lower is better)
Translates to: SSSSSAALSVEF*ARRKPTSVTGV
Trigger: CACGCCGGTGACCGACGTGGGCTTCCTGCGGGCGCAGAATTCCACCGACAGCGCGGCGGAGGAGGAGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp TGCTCAGGTAGATGGCCTGCTGCGAGGCGGTCAGCGTaGCGGCCTGCGCGTGCTCCTTCTCCTCGGACGTGG +
Preference number: 6 (lower is better)
Translates to: CSGRWPAARRSA*RPARAPSPRTW
Trigger: CCACGTCCGAGGAGAAGGAGCACGCGCAGGCCGGCACGCTGACCGCCTCGCAGCAGGCCATCTACCTGAGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp TCCATGGAGCTAGGCTCCAGGGACTCGCGGGAGCCATaGTCGGGCTCCGGGCTACTGCCAGCCCCACACAGC +
Preference number: 6 (lower is better)
Translates to: SMELGSRDSREP*SGSGLLPAPHS
Trigger: GCTGTGTGGGGCTGGCAGTAGCCCGGAGCCCGAGCATGGCTCCCGCGAGTCCCTGGAGCCTAGCTCCATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CAA 90 bp CACTGGCCTCGAATGTCCTCCCCGGCAAGCCGGTTCCCGCTCGGCTaGGCCCGCAGGCTCCACAGGTTTGGAGGCATGAGAGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: HWPRMSSPASRFPLG*ARRLHRFGGMRACW
Trigger: CCAGCAGGCTCTCATGCCTCCAAACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACCGGCTTGCCGGGGAGGACATTCGAGGCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp CGGCGTAGGCCGGATGGCACAGTGCGGACGGCAGGCTaGAGCCATGCTTCTCCATGTGCAGGCTCACGCGCT +
Preference number: 6 (lower is better)
Translates to: RRRPDGTVRTAG*SHASPCAGSRA
Trigger: AGCGCGTGAGCCTGCACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCACTGTGCCATCCGGCCTACGCCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp GGTGGGCACGCTGTCGGCGTAGGCCGGATGGCACAGTaGGGACGGCAGGCTGCAGCCATGCTTCTCCATGTG +
Preference number: 6 (lower is better)
Translates to: GGHAVGVGRMAQ*GRQAAAMLLHV
Trigger: CACATGGAGAAGCATGGCTGCAGCCTGCCGTCCGCACTGTGCCATCCGGCCTACGCCGACAGCGTGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS TCA 72 bp GAGGGCCGCTGCCGTAGGTGGCGGAGGGCTTGCGGTTaGAGAACTCGTCGCGGCTGCTCAGGTAGATGGCCT +
Preference number: 6 (lower is better)
Translates to: EGRCRRWRRACG*RTRRGCSGRWP
Trigger: AGGCCATCTACCTGAGCAGCCGCGACGAGTTCTTCAACCGCAAGCCCTCCGCCACCTACGGCAGCGGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp GGAAGTCCGAGGGCAGCTCGGACACCTTATGGACCCTaGCGTAGGTCTGGCTGCACTGCAGCAGCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: GSPRAARTPYGP*RRSGCTAAAGP
Trigger: CGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGTCCGAGCTGCCCTCGGACTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp AGAAACTATCGGCCTTGTAGGTGGCATAGAGGGGACTaGCACGGCCCTCGGCCTTGTCGCCGGGGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RNYRPCRWHRGD*HGPRPCRRGCR
Trigger: GCGGCAGCCCCGGCGACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATAGTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CAA 72 bp CGAATGTCCTCCCCGGCAAGCCGGTTCCCGCTCGGCTaGGCCCGCAGGCTCCACAGGTTTGGAGGCATGAGA +
Preference number: 6 (lower is better)
Translates to: RMSSPASRFPLG*ARRLHRFGGMR
Trigger: TCTCATGCCTCCAAACCTGTGGAGCCTGCGGGCCAAGCCGAGCGGGAACCGGCTTGCCGGGGAGGACATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp TGCTCGGGCTCCGGGCTACTGCCAGCCCCACACAGCTaGACCCTGAGCCTATCTCCATCCCCATCACTGGCT +
Preference number: 6 (lower is better)
Translates to: CSGSGLLPAPHS*TLSLSPSPSLA
Trigger: AGCCAGTGATGGGGATGGAGATAGGCTCAGGGTGCAGCTGTGTGGGGCTGGCAGTAGCCCGGAGCCCGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp AGGGCACTGAGTTTCTCCATGTCTGCGGCAGAGGCCTaGGGAGAGCAAAGGAGAGGGTCAGCGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RALSFSMSAAEA*GEQRRGSARSR
Trigger: CCTGCTGCGCGCTGACCCTCTCCTTTGCTCTCCGCAGGCCTCTGCCGCAGACATGGAGAAACTCAGTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS TCA 72 bp GTGCTGGATCTCCCTGCTCGCAGCTGTCCAGGCCCCTaGTGCCTGTGGCTTCCAAGGAATGCCAGGGACTCT +
Preference number: 6 (lower is better)
Translates to: VLDLPARSCPGP*CLWLPRNARDS
Trigger: AGAGTCCCTGGCATTCCTTGGAAGCCACAGGCATCAGGGGCCTGGACAGCTGCGAGCAGGGAGATCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS GCA 72 bp GCTCGGACACCTTATGGACCCTGCCGTAGGTCTGGCTaGACTGCAGCAGCTGGGCCGCTAGATTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: ARTPYGPCRRSG*TAAAGPLDCSP
Trigger: AGGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAGCCAGACCTACGGCAGGGTCCATAAGGTGTCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS GCA 72 bp CTGCACCCTGAGCCTATCTCCATCCCCATCACTGGCTaGATAGCCAGCGAGCGCATCAGCCGAACGACTGGG +
Preference number: 6 (lower is better)
Translates to: LHPEPISIPITG*IASERISRTTG
Trigger: CCCAGTCGTTCGGCTGATGCGCTCGCTGGCTATGCAGCCAGTGATGGGGATGGAGATAGGCTCAGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp GGTCATCGCCCTCCGAGAAACTATCGGCCTTGTAGGTaGCATAGAGGGGACTGGCACGGCCCTCGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: GHRPPRNYRPCR*HRGDWHGPRPC
Trigger: ACAAGGCCGAGGGCCGTGCCAGTCCCCTCTATGCCACCTACAAGGCCGATAGTTTCTCGGAGGGCGATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CAA 90 bp AGGGTCACTGGGTCTAGCACGCGAACAGTGACCTCATCCAGGAACTaGGAGAAAGGCATCCTGGCTTCCCGCTGGCGGCTCAAGCGGGCA +
Preference number: 6 (lower is better)
Translates to: RVTGSSTRTVTSSRN*EKGILASRWRLKRA
Trigger: TGCCCGCTTGAGCCGCCAGCGGGAAGCCAGGATGCCTTTCTCCAAGTTCCTGGATGAGGTCACTGTTCGCGTGCTAGACCCAGTGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS CCA 72 bp ACCTGCTTCCCAGCTTGGGTGGGATACAGTGTTCTCTaGGCCCGTGCCGGGGCTCTGTGTGTGGCTGTAGAT +
Preference number: 6 (lower is better)
Translates to: TCFPAWVGYSVL*ARAGALCVAVD
Trigger: ATCTACAGCCACACACAGAGCCCCGGCACGGGCCCAGAGAACACTGTATCCCACCCAAGCTGGGAAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS CCA 72 bp GCTTGTGCTAGGGGATTCTGCTGGGGAAGGAGGGCCTaGACACCTCAGTGTCCTAGCCTTACAGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: ACARGFCWGRRA*TPQCPSLTATC
Trigger: GCAGGTGGCTGTAAGGCTAGGACACTGAGGTGTCCAGGCCCTCCTTCCCCAGCAGAATCCCCTAGCACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS TCA 72 bp AGCCCTCCAGGGTCACTGGGTCTAGCACGCGAACAGTaGCCTCATCCAGGAACTTGGAGAAAGGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: SPPGSLGLAREQ*PHPGTWRKASW
Trigger: CCAGGATGCCTTTCTCCAAGTTCCTGGATGAGGTCACTGTTCGCGTGCTAGACCCAGTGACCCTGGAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209829.2
CDS GCA 72 bp AGGTCTGGCTGCACTGCAGCAGCTGGGCCGCTAGATTaGAGTCCTTCCTATAGAGCTCGTTGTCCTCCGACA +
Preference number: 6 (lower is better)
Translates to: RSGCTAAAGPLD*SPSYRARCPPT
Trigger: TGTCGGAGGACAACGAGCTCTATAGGAAGGACTGCAATCTAGCGGCCCAGCTGCTGCAGTGCAGCCAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CCA 72 bp GGGCACGCCTCAGCTCAATCTCCAGGTAGTGGCGCGTaGAGTCAAACTCCGTCTCCAGCTTCTCCAGCTTAT +
Preference number: 6 (lower is better)
Translates to: GHASAQSPGSGA*SQTPSPASPAY
Trigger: ATAAGCTGGAGAAGCTGGAGACGGAGTTTGACTCCACGCGCCACTACCTGGAGATTGAGCTGAGGCGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000185745.2
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2
CDS CAA 90 bp TCCGACAGCTTGTCAATGGTCACCTTAGCCTCCAGCAGGTGGCTGTaGAGGGCGACAATCTCATGGCTCATGGCACGCTTCTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SDSLSMVTLASSRWL*RATISWLMARFSSS
Trigger: TGAGGAAGAGAAGCGTGCCATGAGCCATGAGATTGTCGCCCTCAACAGCCACCTGCTGGAGGCTAAGGTGACCATTGACAAGCTGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000190647.3
ENSMUST00000209829.2
ENSMUST00000238841.2
ENSMUST00000239108.2