Pregenerated sensors for BECN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000104158

Ensembl transcript IDs: ENSMUST00000194391.2, ENSMUST00000201297.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGTCCGCCAGAGGTAAGCAGAGTAAAAGTGCAGAGGGCACTTCCCTaGGACACCCTGCCACCGTCAGAGTGGGGTCTGCCGGAGGTCCTG	+
Preference number: 5 (lower is better) Translates to: GPPEVSRVKVQRALP*DTLPPSEWGLPEVL Trigger: CAGGACCTCCGGCAGACCCCACTCTGACGGTGGCAGGGTGTCCCAGGGAAGTGCCCTCTGCACTTTTACTCTGCTTACCTCTGGCGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 90 bp	TTGCTCTCGGCCTGGGCTGCTCTGAGTTCAGCGGCTACCCTTGCATaGTGGCCGTCTAAATCCTCTAGCTCCTGGGTCAGCCTTGCTTCC	+
Preference number: 5 (lower is better) Translates to: LLSAWAALSSAATLA*WPSKSSSSWVSLAS Trigger: GGAAGCAAGGCTGACCCAGGAGCTAGAGGATTTAGACGGCCATCATGCAAGGGTAGCCGCTGAACTCAGAGCAGCCCAGGCCGAGAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 90 bp	ATTTCAGAGCCCTGGACCACTCCTCCTCCGTGTTCAGATGGGTCCTaGTGGAGCAGCACTCCCCACTGTCCCAGACATCCTCCATCAGCC	+
Preference number: 5 (lower is better) Translates to: ISEPWTTPPPCSDGS*WSSTPHCPRHPPSA Trigger: GGCTGATGGAGGATGTCTGGGACAGTGGGGAGTGCTGCTCCATCAGGACCCATCTGAACACGGAGGAGGAGTGGTCCAGGGCTCTGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 90 bp	AATCCTCTAGCTCCTGGGTCAGCCTTGCTTCCTCCTGCTCCAGACTaGACAGTTCGGCACAAAGCTCCGCGTGTAGCGCCTCCCTCTCTT	+
Preference number: 5 (lower is better) Translates to: NPLAPGSALLPPAPD*TVRHKAPRVAPPSL Trigger: AAGAGAGGGAGGCGCTACACGCGGAGCTTTGTGCCGAACTGTCCAGTCTGGAGCAGGAGGAAGCAAGGCTGACCCAGGAGCTAGAGGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 90 bp	TCAGATGCCAGGAGAGCGAGCTGGTCGTCTAGTTGCATCAGAAGATaGTCGGTACAGTCCACACACAGCGGGTGGTCCACCACCTTTTGG	+
Preference number: 5 (lower is better) Translates to: SDARRASWSSSCIRR*SVQSTHSGWSTTFW Trigger: CCAAAAGGTGGTGGACCACCCGCTGTGTGTGGACTGTACCGACCATCTTCTGATGCAACTAGACGACCAGCTCGCTCTCCTGGCATCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS GCA 90 bp	TACTTCTGGTTGTCAGATGCCAGGAGAGCGAGCTGGTCGTCTAGTTaGATCAGAAGATGGTCGGTACAGTCCACACACAGCGGGTGGTCC	+
Preference number: 5 (lower is better) Translates to: YFWLSDARRASWSSS*IRRWSVQSTHSGWS Trigger: GGACCACCCGCTGTGTGTGGACTGTACCGACCATCTTCTGATGCAACTAGACGACCAGCTCGCTCTCCTGGCATCTGACAACCAGAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS GCA 90 bp	AGCTGTTCCATCTTGAAAACAGAGTACTCGACCCTGTGCTGCTCATaGTGTTTATACAGCTCCTTGCTCTCGGCCTGGGCTGCTCTGAGT	+
Preference number: 5 (lower is better) Translates to: SCSILKTEYSTLCCS*CLYSSLLSAWAALS Trigger: ACTCAGAGCAGCCCAGGCCGAGAGCAAGGAGCTGTATAAACAGCATGAGCAGCACAGGGTCGAGTACTCTGTTTTCAAGATGGAACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 90 bp	GTAAATGTGGCGTTGAAGATATTGGTCTGTCTTAAGCGGTACTGCTaGCTCAGGGCATACGTCAGCTGGTTCTCCACACTGCTCAGCTGG	+
Preference number: 5 (lower is better) Translates to: VNVALKILVCLKRYC*LRAYVSWFSTLLSW Trigger: CCAGCTGAGCAGTGTGGAGAACCAGCTGACGTATGCCCTGAGTCAGCAGTACCGCTTAAGACAGACCAATATCTTCAACGCCACATTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 90 bp	ACCTTAAGGAAGCCCAAGCAAGGATCAACTTCAAGTCCGAAAGCATaGATTTCAGAGCCCTGGACCACTCCTCCTCCGTGTTCAGATGGG	+
Preference number: 5 (lower is better) Translates to: TLRKPKQGSTSSPKA*ISEPWTTPPPCSDG Trigger: CCCATCTGAACACGGAGGAGGAGTGGTCCAGGGCTCTGAAATTCATGCTTTCGGACTTGAAGTTGATCCTTGCTTGGGCTTCCTTAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 90 bp	TCTCCACACTGCTCAGCTGGTCCATCAGCTCCAGCTGTTCCATCTTaGAAACAGAGTACTCGACCCTGTGCTGCTCATGCTGTTTATACA	+
Preference number: 5 (lower is better) Translates to: SPHCSAGPSAPAVPS*KQSTRPCAAHAVYT Trigger: TGTATAAACAGCATGAGCAGCACAGGGTCGAGTACTCTGTTTTCAAGATGGAACAGCTGGAGCTGATGGACCAGCTGAGCAGTGTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 90 bp	TGGAAACTTTTGTACTTCTGGTTGTCAGATGCCAGGAGAGCGAGCTaGTCGTCTAGTTGCATCAGAAGATGGTCGGTACAGTCCACACAC	+
Preference number: 5 (lower is better) Translates to: WKLLYFWLSDARRAS*SSSCIRRWSVQSTH Trigger: GTGTGTGGACTGTACCGACCATCTTCTGATGCAACTAGACGACCAGCTCGCTCTCCTGGCATCTGACAACCAGAAGTACAAAAGTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	AGGGCACTTCCCTGGGACACCCTGCCACCGTCAGAGTaGGGTCTGCCGGAGGTCCTGACTTGGGACTCTGCA	+
Preference number: 6 (lower is better) Translates to: RALPWDTLPPSE*GLPEVLTWDSA Trigger: TGCAGAGTCCCAAGTCAGGACCTCCGGCAGACCCCACTCTGACGGTGGCAGGGTGTCCCAGGGAAGTGCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	GAGGTAAGCAGAGTAAAAGTGCAGAGGGCACTTCCCTaGGACACCCTGCCACCGTCAGAGTGGGGTCTGCCG	+
Preference number: 6 (lower is better) Translates to: EVSRVKVQRALP*DTLPPSEWGLP Trigger: CGGCAGACCCCACTCTGACGGTGGCAGGGTGTCCCAGGGAAGTGCCCTCTGCACTTTTACTCTGCTTACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	CCACCGTCAGAGTGGGGTCTGCCGGAGGTCCTGACTTaGGACTCTGCAGAAACTGGAATTTCTGTGGGGGTA	+
Preference number: 6 (lower is better) Translates to: PPSEWGLPEVLT*DSAETGISVGV Trigger: TACCCCCACAGAAATTCCAGTTTCTGCAGAGTCCCAAGTCAGGACCTCCGGCAGACCCCACTCTGACGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	AGGAGAGCGAGCTGGTCGTCTAGTTGCATCAGAAGATaGTCGGTACAGTCCACACACAGCGGGTGGTCCACC	+
Preference number: 6 (lower is better) Translates to: RRASWSSSCIRR*SVQSTHSGWST Trigger: GGTGGACCACCCGCTGTGTGTGGACTGTACCGACCATCTTCTGATGCAACTAGACGACCAGCTCGCTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 72 bp	TCGACCCTGTGCTGCTCATGCTGTTTATACAGCTCCTaGCTCTCGGCCTGGGCTGCTCTGAGTTCAGCGGCT	+
Preference number: 6 (lower is better) Translates to: STLCCSCCLYSS*LSAWAALSSAA Trigger: AGCCGCTGAACTCAGAGCAGCCCAGGCCGAGAGCAAGGAGCTGTATAAACAGCATGAGCAGCACAGGGTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 90 bp	ACAGAGTACTCGACCCTGTGCTGCTCATGCTGTTTATACAGCTCCTaGCTCTCGGCCTGGGCTGCTCTGAGTTCAGCGGCTACCCTTGCA	+
Preference number: 6 (lower is better) Translates to: TEYSTLCCSCCLYSS*LSAWAALSSAATLA Trigger: TGCAAGGGTAGCCGCTGAACTCAGAGCAGCCCAGGCCGAGAGCAAGGAGCTGTATAAACAGCATGAGCAGCACAGGGTCGAGTACTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 72 bp	GTTTATACAGCTCCTTGCTCTCGGCCTGGGCTGCTCTaGGTTCAGCGGCTACCCTTGCATGATGGCCGTCTA	+
Preference number: 6 (lower is better) Translates to: VYTAPCSRPGLL*VQRLPLHDGRL Trigger: TAGACGGCCATCATGCAAGGGTAGCCGCTGAACTCAGAGCAGCCCAGGCCGAGAGCAAGGAGCTGTATAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS GCA 72 bp	TTGTCAGATGCCAGGAGAGCGAGCTGGTCGTCTAGTTaGATCAGAAGATGGTCGGTACAGTCCACACACAGC	+
Preference number: 6 (lower is better) Translates to: LSDARRASWSSS*IRRWSVQSTHS Trigger: GCTGTGTGTGGACTGTACCGACCATCTTCTGATGCAACTAGACGACCAGCTCGCTCTCCTGGCATCTGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	ATCAGAAGATGGTCGGTACAGTCCACACACAGCGGGTaGTCCACCACCTTTTGGTCGGAGAGGATTTCGAAG	+
Preference number: 6 (lower is better) Translates to: IRRWSVQSTHSG*STTFWSERISK Trigger: CTTCGAAATCCTCTCCGACCAAAAGGTGGTGGACCACCCGCTGTGTGTGGACTGTACCGACCATCTTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 72 bp	CTGCTCAGCTGGTCCATCAGCTCCAGCTGTTCCATCTaGAAAACAGAGTACTCGACCCTGTGCTGCTCATGC	+
Preference number: 6 (lower is better) Translates to: LLSWSISSSCSI*KTEYSTLCCSC Trigger: GCATGAGCAGCACAGGGTCGAGTACTCTGTTTTCAAGATGGAACAGCTGGAGCTGATGGACCAGCTGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS TCA 72 bp	TGCTCAGCTGGTCCATCAGCTCCAGCTGTTCCATCTTaGAAACAGAGTACTCGACCCTGTGCTGCTCATGCT	+
Preference number: 6 (lower is better) Translates to: CSAGPSAPAVPS*KQSTRPCAAHA Trigger: AGCATGAGCAGCACAGGGTCGAGTACTCTGTTTTCAAGATGGAACAGCTGGAGCTGATGGACCAGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS GCA 72 bp	ATCTTGAAAACAGAGTACTCGACCCTGTGCTGCTCATaGTGTTTATACAGCTCCTTGCTCTCGGCCTGGGCT	+
Preference number: 6 (lower is better) Translates to: ILKTEYSTLCCS*CLYSSLLSAWA Trigger: AGCCCAGGCCGAGAGCAAGGAGCTGTATAAACAGCATGAGCAGCACAGGGTCGAGTACTCTGTTTTCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	TTGTACTTCTGGTTGTCAGATGCCAGGAGAGCGAGCTaGTCGTCTAGTTGCATCAGAAGATGGTCGGTACAG	+
Preference number: 6 (lower is better) Translates to: LYFWLSDARRAS*SSSCIRRWSVQ Trigger: CTGTACCGACCATCTTCTGATGCAACTAGACGACCAGCTCGCTCTCCTGGCATCTGACAACCAGAAGTACAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	ACCAGCAACTCTCTGTCCTGGAAACTTTTGTACTTCTaGTTGTCAGATGCCAGGAGAGCGAGCTGGTCGTCT	+
Preference number: 6 (lower is better) Translates to: TSNSLSWKLLYF*LSDARRASWSS Trigger: AGACGACCAGCTCGCTCTCCTGGCATCTGACAACCAGAAGTACAAAAGTTTCCAGGACAGAGAGTTGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 72 bp	TCCTCACTCACCAGCAACTCTCTGTCCTGGAAACTTTaGTACTTCTGGTTGTCAGATGCCAGGAGAGCGAGC	+
Preference number: 6 (lower is better) Translates to: SSLTSNSLSWKL*YFWLSDARRAS Trigger: GCTCGCTCTCCTGGCATCTGACAACCAGAAGTACAAAAGTTTCCAGGACAGAGAGTTGCTGGTGAGTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 90 bp	TTCTCCACACTGCTCAGCTGGTCCATCAGCTCCAGCTGTTCCATCTaGAAAACAGAGTACTCGACCCTGTGCTGCTCATGCTGTTTATAC	+
Preference number: 6 (lower is better) Translates to: FSTLLSWSISSSCSI*KTEYSTLCCSCCLY Trigger: GTATAAACAGCATGAGCAGCACAGGGTCGAGTACTCTGTTTTCAAGATGGAACAGCTGGAGCTGATGGACCAGCTGAGCAGTGTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	TCCCTCTCTTCCTCACTCACCAGCAACTCTCTGTCCTaGAAACTTTTGTACTTCTGGTTGTCAGATGCCAGG	+
Preference number: 6 (lower is better) Translates to: SLSSSLTSNSLS*KLLYFWLSDAR Trigger: CCTGGCATCTGACAACCAGAAGTACAAAAGTTTCCAGGACAGAGAGTTGCTGGTGAGTGAGGAAGAGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 72 bp	AGCAACTCTCTGTCCTGGAAACTTTTGTACTTCTGGTaGTCAGATGCCAGGAGAGCGAGCTGGTCGTCTAGT	+
Preference number: 6 (lower is better) Translates to: SNSLSWKLLYFW*SDARRASWSSS Trigger: ACTAGACGACCAGCTCGCTCTCCTGGCATCTGACAACCAGAAGTACAAAAGTTTCCAGGACAGAGAGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 72 bp	ATGGTCCCCAAAGGGAACCAGTTGATATCTCTGGAATaGCAGTCCAGCTATCTTGGACAAGCTGAAGAGCAG	+
Preference number: 6 (lower is better) Translates to: MVPKGNQLISLE*QSSYLGQAEEQ Trigger: CTGCTCTTCAGCTTGTCCAAGATAGCTGGACTGCAATTCCAGAGATATCAACTGGTTCCCTTTGGGGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CAA 72 bp	GGACTTGAGATAGGAATGGTCCCCAAAGGGAACCAGTaGATATCTCTGGAATTGCAGTCCAGCTATCTTGGA	+
Preference number: 6 (lower is better) Translates to: GLEIGMVPKGNQ*ISLELQSSYLG Trigger: TCCAAGATAGCTGGACTGCAATTCCAGAGATATCAACTGGTTCCCTTTGGGGACCATTCCTATCTCAAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2
CDS CCA 72 bp	TCGGAGAGGATTTCGAAGGTCTCTAAGACAGTATTTTaGATAGTGTTCATAGTTCTCATGGAGGCAGATTCA	+
Preference number: 6 (lower is better) Translates to: SERISKVSKTVF*IVFIVLMEADS Trigger: TGAATCTGCCTCCATGAGAACTATGAACACTATCCAAAATACTGTCTTAGAGACCTTCGAAATCCTCTCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194391.2 ENSMUST00000201297.2

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