Pregenerated sensors for BDKRB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041347Ensembl transcript IDs: ENSMUST00000041229.5, ENSMUST00000182899.2, ENSMUST00000183086.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCGATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGAGAAGCCAGGCTTCTTaGCTCAATGCTGTTTCAATT | + |
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Preference number: 2 (lower is better) Translates to: PITLSSGIFVGCGSANQMRSQAS*LNAVSI Trigger: AATTGAAACAGCATTGAGCCAAGAAGCCTGGCTTCT...CATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| 3UTR-3UTR CAA 90 bp | TGCGAGGTCCCGGCTACCCTGTCCTCCGGCTACCCTGTCCTCCGATTACTCTGTATTCCAGCAGGACAGTaGGAAGAGTTCTTTCCTACT | + |
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Preference number: 3 (lower is better) Translates to: CEVPATLSSGYPVLRLLCIPAGQ*EEFFPT Trigger: AGTAGGAAAGAACTCTTCCAACTGTCCTGCTGGAAT...ACAGAGTAATCGGAGGACAGGGTAGCCGGAGGACAGGGTAGCCGGGACCTCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| 3UTR-3UTR CAA 90 bp | TGCGAGGTCCCGGCTACCCTGTCCTCCGGCTACCCTGTCCTCCGATTACTCTGTAAGAAGCCAGGCTTCTaGGCTCAATGCTGTTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: CEVPATLSSGYPVLRLLCKKPGF*AQCCFN Trigger: ATTGAAACAGCATTGAGCCAAGAAGCCTGGCTTCTT...ACAGAGTAATCGGAGGACAGGGTAGCCGGAGGACAGGGTAGCCGGGACCTCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| 3UTR CCA 72 bp | TCCGATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTaGCTCAGCCAACCAGATGGTCCCTATGATAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SDYSVLRHLCGL*LSQPDGPYDSR Trigger: TCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR GCA 90 bp | TGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGCGCTGCCGCCGCTGCTaGCACCATCGTCGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: CGLWLSQPDGPYDSRDGWRCRRC*HHRRQG Trigger: GCCTTGGCGACGATGGTGGCAGCAGCGGCGGCAGCG...CCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GCATCTGCGAGGTCCCGGCTACCCTGTCCTCCGGCTACCCTGTCCTCCGATTACAACGCAGAAGGAACGTaGGGGTGCTCAAGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ASARSRLPCPPATLSSDYNAEGT*GCSRGP Trigger: GGGGCCTCTTGAGCACCCCCACGTTCCTTCTGCGTT...GTAATCGGAGGACAGGGTAGCCGGAGGACAGGGTAGCCGGGACCTCGCAGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR GCA 90 bp | GTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAGGTCACTTGGGCTTaGCGTCGCCGCCGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VGCGSANQMVPMIAETVGQVTWA*RRRRFP Trigger: GGGGAACCGGCGGCGACGGCAAGCCCAAGTGACCTG...ACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR GCA 90 bp | TCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAAGGCGCTGCCGCCGCTaGTGCCACCATCGTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGIFVGCGSANQMVPMIRRCRR*CHHRRQ Trigger: TTGGCGACGATGGTGGCAGCAGCGGCGGCAGCGCCT...TATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GCATCTGCGAGGTCCCGGCTACCCTGTCCTCCGGCTACCCTGTCCTCCGATTACTTGGGAGGGGCCTGCTaGCTTTGGTTAGAAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ASARSRLPCPPATLSSDYLGGAC*LWLEGC Trigger: ACAGCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAA...GTAATCGGAGGACAGGGTAGCCGGAGGACAGGGTAGCCGGGACCTCGCAGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR TCA 90 bp | TCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCGCCCTCGCAGGAGGTaGTGTTGGGAGGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SANQMVPMIAETVGQEARRPRRR*CWEGPA Trigger: AGCAGGCCCCTCCCAACATCACCTCCTGCGAGGGCG...CCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCAGGTCACTTGGGCTTaGCGTCGCCGCCGGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SANQMVPMIAETVGQEARQVTWA*RRRRFP Trigger: GGGGAACCGGCGGCGACGGCAAGCCCAAGTGACCTG...CCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | TGCGAGGTCCCGGCTACCCTGTCCTCCGGCTACCCTGTCCTCCGATTACTCTGTGGTAGATTTCTGCTATaGTTAGGCGCTGCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CEVPATLSSGYPVLRLLCGRFLL*LGAAAA Trigger: AGCGGCGGCAGCGCCTAACCATAGCAGAAATCTACC...ACAGAGTAATCGGAGGACAGGGTAGCCGGAGGACAGGGTAGCCGGGACCTCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR TCA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATCGCCCTCGCAGGAGGTaGTGTTGGGAGGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GPYDSRDGWSRSQASWLNRPRRR*CWEGPA Trigger: AGCAGGCCCCTCCCAACATCACCTCCTGCGAGGGCG...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR TCA 90 bp | ATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCCCAGCTACCCAGATaGGCAGGCAGGTCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITLSSGIFVGCGSANQMVPQLPR*AGRSLG Trigger: CCCAAGTGACCTGCCTGCTCATCTGGGTAGCTGGGG...GACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCGAAGGAACGTGGGGGTaGTCAAGAGGCCCCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLCPPASLWAVAQPTRWSEGTWG*SRGPQL Trigger: TAGCTGGGGGCCTCTTGAGCACCCCCACGTTCCTTC...GGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGTAGCGGTCCTGACTaGTGGCCACCACCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCGLWLSQPDGPYDSRDGCSGPD*WPPPGR Trigger: TCTTCCTGGTGGTGGCCATCAGTCAGGACCGCTACA...ACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCACACCGGGTTCTGCTaGCCTCCTTCTGTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DYSVLRHLCGLWLSQPDGHTGFC*PPSVLS Trigger: TGAGAGGACAGAAGGAGGCCAGCAGAACCCGGTGTG...ACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAACACACCGGGTTCTGCTaGCCTCCTTCTGTCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQHTGFC*PPSVLS Trigger: TGAGAGGACAGAAGGAGGCCAGCAGAACCCGGTGTG...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| 3UTR CAA 72 bp | TACCCTGTCCTCCGATTACTCTGTCCTCCGGCATCTTaGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YPVLRLLCPPAS*WAVAQPTRWSL Trigger: TAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATCGGAGGACAGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR TCA 90 bp | TCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGTGTAGCGGTCCTGACTaGTGGCCACCACCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SANQMVPMIAETVGQEARCSGPD*WPPPGR Trigger: TCTTCCTGGTGGTGGCCATCAGTCAGGACCGCTACA...CCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR GCA 90 bp | TGCTGTTTCAATTCCAGCAGGACAGTTGGAAGAGTTCTTTCCTACTGGGCAATACGCTGCCGCCGCTGCTaGCACCATCGTCGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCFNSSRTVGRVLSYWAIRCRRC*HHRRQG Trigger: GCCTTGGCGACGATGGTGGCAGCAGCGGCGGCAGCG...TATTGCCCAGTAGGAAAGAACTCTTCCAACTGTCCTGCTGGAATTGAAACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATGAAGGAACGTGGGGGTaGTCAAGAGGCCCCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPYDSRDGWSRSQASWLNEGTWG*SRGPQL Trigger: TAGCTGGGGGCCTCTTGAGCACCCCCACGTTCCTTC...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | CGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGGGGCCTGCTGGCTTTaGTTAGAAGGCTGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLCGLWLSQPDGPYDSRGACWL*LEGCSF Trigger: GAAGCTACAGCCTTCTAACCAAAGCCAGCAGGCCCC...TCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGGGGCCTGCTGGCTTTaGTTAGAAGGCTGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQGACWL*LEGCSF Trigger: GAAGCTACAGCCTTCTAACCAAAGCCAGCAGGCCCC...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | TCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAAGTGATGACAAACCCTaGCAGCACCCGACACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSGIFVGCGSANQMVPMISDDKP*QHPTQQ Trigger: CTGCTGTGTCGGGTGCTGCCAGGGTTTGTCATCACT...TATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATAACGCAGAAGGAACGTaGGGGTGCTCAAGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GPYDSRDGWSRSQASWLNNAEGT*GCSRGP Trigger: GGGGCCTCTTGAGCACCCCCACGTTCCTTCTGCGTT...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | TCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGTTGGGAGGGGCCTGCTaGCTTTGGTTAGAAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SANQMVPMIAETVGQEARLGGAC*LWLEGC Trigger: ACAGCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAA...CCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAGGATGGCAGCCAATaGGAGGAGGAAACCCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQEDGSQ*EEETQN Trigger: GTTTTGGGTTTCCTCCTCCCATTGGCTGCCATCCTC...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | ATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCTTCCAGAAGCAGTCCTaGATCACTCTCACCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: ITLSSGIFVGCGSANQMVFQKQS*ITLTWT Trigger: GGTCCAGGTGAGAGTGATCCAGGACTGCTTCTGGAA...GACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAATTCCAGAAGCAGTCCTaGATCACTCTCACCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQFQKQS*ITLTWT Trigger: GGTCCAGGTGAGAGTGATCCAGGACTGCTTCTGGAA...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR TCA 90 bp | GATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCAGGATGTGAAAGTTaGAGTAGAGGATGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DYSVLRHLCGLWLSQPDGPGCES*SRGWQP Trigger: TGGCTGCCATCCTCTACTTCAACTTTCACATCCTGG...ACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR TCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAACCAGGATGTGAAAGTTaGAGTAGAGGATGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQPGCES*SRGWQP Trigger: TGGCTGCCATCCTCTACTTCAACTTTCACATCCTGG...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATATGTTGGGAGGGGCCTaGTGGCTTTGGTTAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPYDSRDGWSRSQASWLNMLGGA*WLWLEG Trigger: GCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAACAT...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATGGTAGATTTCTGCTATaGTTAGGCGCTGCCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GPYDSRDGWSRSQASWLNGRFLL*LGAAAA Trigger: AGCGGCGGCAGCGCCTAACCATAGCAGAAATCTACC...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | CGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGATGGATCACTCTCACCTaGACCAGGAAATCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RHLCGLWLSQPDGPYDSRWITLT*TRKSRK Trigger: CTTCCTGGATTTCCTGGTCCAGGTGAGAGTGATCCA...TCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR TCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGGTTCAGGCAGCTGTTaGCAAAAGCAAAGAAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQGSGSC*QKQRSW Trigger: CCAACTTCTTTGCTTTTGTCAACAGCTGCCTGAACC...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR GCA 90 bp | TCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATACACCAGATCAGAAGCTaGCAAGTTAGCCAGGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSGIFVGCGSANQMVPMIHQIRS*QVSQVD Trigger: ATCTACCTGGCTAACTTGGCAGCTTCTGATCTGGTG...TATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAACACCAGATCAGAAGCTaGCAAGTTAGCCAGGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: GCGSANQMVPMIAETVGQHQIRS*QVSQVD Trigger: ATCTACCTGGCTAACTTGGCAGCTTCTGATCTGGTG...TTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATGAGGATGGCAGCCAATaGGAGGAGGAAACCCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: GPYDSRDGWSRSQASWLNEDGSQ*EEETQN Trigger: GTTTTGGGTTTCCTCCTCCCATTGGCTGCCATCCTC...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR GCA 90 bp | TGCTGTTTCAATTCCAGCAGGACAGTTGGAAGAGTTCTTTCCTACTGGGCAATAATGTTGGGAGGGGCCTaGTGGCTTTGGTTAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: CCFNSSRTVGRVLSYWAIMLGGA*WLWLEG Trigger: GCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAACAT...TATTGCCCAGTAGGAAAGAACTCTTCCAACTGTCCTGCTGGAATTGAAACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CCA 90 bp | TGCTGTTTCAATTCCAGCAGGACAGTTGGAAGAGTTCTTTCCTACTGGGCAATATGGATCACTCTCACCTaGACCAGGAAATCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CCFNSSRTVGRVLSYWAIWITLT*TRKSRK Trigger: CTTCCTGGATTTCCTGGTCCAGGTGAGAGTGATCCA...TATTGCCCAGTAGGAAAGAACTCTTCCAACTGTCCTGCTGGAATTGAAACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS TCA 90 bp | GCAGAAGGAACGTGGGGGTGCTCAAGAGGCCCCCAGCTACCCAGATaGGCAGGCAGGTCACTTGGGCTTGCCGTCGCCGCCGGTTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: AEGTWGCSRGPQLPR*AGRSLGLAVAAGSP Trigger: GGGGGAACCGGCGGCGACGGCAAGCCCAAGTGACCTGCCTGCTCATCTGGGTAGCTGGGGGCCTCTTGAGCACCCCCACGTTCCTTCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CCA 90 bp | GCTTCCGGGGCGCCCTCGCAGGAGGTGATGTTGGGAGGGGCCTGCTaGCTTTGGTTAGAAGGCTGTAGCTTCAGCGAGGCCTGGGACGCC | + |
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Preference number: 5 (lower is better) Translates to: ASGAPSQEVMLGGAC*LWLEGCSFSEAWDA Trigger: GGCGTCCCAGGCCTCGCTGAAGCTACAGCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAACATCACCTCCTGCGAGGGCGCCCCGGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS GCA 90 bp | CAGGCTTCCGGGGCGCCCTCGCAGGAGGTGATGTTGGGAGGGGCCTaGTGGCTTTGGTTAGAAGGCTGTAGCTTCAGCGAGGCCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: QASGAPSQEVMLGGA*WLWLEGCSFSEAWD Trigger: GTCCCAGGCCTCGCTGAAGCTACAGCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAACATCACCTCCTGCGAGGGCGCCCCGGAAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTGGGCTGTGGCTCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTCGCAGGAGGTGATGTaGGGAGGGGCCTGCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LCGLWLSQPDGPYDSRDGSQEVM*GGACWL Trigger: AAGCCAGCAGGCCCCTCCCAACATCACCTCCTGCGA...ACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGAGCCACAGCCCACAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS GCA 90 bp | GAGGTCACTTCCAAAGGGCCAGTTGAAACGGTTCCCAACGTTCTCTaGCCAGAAGGGCAGGCCCAGCACAAACACCAGATCAGAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EVTSKGPVETVPNVL*PEGQAQHKHQIRSC Trigger: GCAGCTTCTGATCTGGTGTTTGTGCTGGGCCTGCCCTTCTGGGCAGAGAACGTTGGGAACCGTTTCAACTGGCCCTTTGGAAGTGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS-3UTR CAA 90 bp | CCGATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGATGCTGATGAACAGGTaGGCCTTGATGACCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PITLSSGIFVGCGSANQMMLMNR*ALMTPL Trigger: CAGCGGGGTCATCAAGGCCAACCTGTTCATCAGCAT...CATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CAA 90 bp | CCGATTACTCTGTCCTCCGGCATCTTTGTGGGCTGTGGCTCAGCCAACCAGATGACAAAAGCAAAGAAGTaGGCCAGCTGCAGGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PITLSSGIFVGCGSANQMTKAKK*ASCRPR Trigger: CCTGGGCCTGCAGCTGGCCAACTTCTTTGCTTTTGT...CATCTGGTTGGCTGAGCCACAGCCCACAAAGATGCCGGAGGACAGAGTAATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041229.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGATGCTGATGAACAGGTaGGCCTTGATGACCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SANQMVPMIAETVGQEARMLMNR*ALMTPL Trigger: CAGCGGGGTCATCAAGGCCAACCTGTTCATCAGCAT...CCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CAA 90 bp | GGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGCTTCTTGGCTCAATATCAGCCCCATTGTCTaGCTGTCCTTGGGTCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: GPYDSRDGWSRSQASWLNISPIV*LSLGPP Trigger: TGGGGGACCCAAGGACAGCAAGACAATGGGGCTGAT...ATTGAGCCAAGAAGCCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCAACCAGATGGTCCCTATGATAGCAGAGACGGTTGGTCAAGAAGCCAGGACAAAAGCAAAGAAGTaGGCCAGCTGCAGGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SANQMVPMIAETVGQEARTKAKK*ASCRPR Trigger: CCTGGGCCTGCAGCTGGCCAACTTCTTTGCTTTTGT...CCTGGCTTCTTGACCAACCGTCTCTGCTATCATAGGGACCATCTGGTTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS-3UTR CAA 90 bp | TGCTGTTTCAATTCCAGCAGGACAGTTGGAAGAGTTCTTTCCTACTGGGCAATATCGCAGGAGGTGATGTaGGGAGGGGCCTGCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: CCFNSSRTVGRVLSYWAISQEVM*GGACWL Trigger: AAGCCAGCAGGCCCCTCCCAACATCACCTCCTGCGA...TATTGCCCAGTAGGAAAGAACTCTTCCAACTGTCCTGCTGGAATTGAAACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 |
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| CDS CCA 90 bp | CAGGGAGGCCAGGATGTGAAAGTTGAAGTAGAGGATGGCAGCCAATaGGAGGAGGAAACCCAAAACGTTCAACTCCACCATCCTTACAAA | + |
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Preference number: 5 (lower is better) Translates to: QGGQDVKVEVEDGSQ*EEETQNVQLHHPYK Trigger: TTTGTAAGGATGGTGGAGTTGAACGTTTTGGGTTTCCTCCTCCCATTGGCTGCCATCCTCTACTTCAACTTTCACATCCTGGCCTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CCA 72 bp | AGGCCCCCAGCTACCCAGATGAGCAGGCAGGTCACTTaGGCTTGCCGTCGCCGCCGGTTCCCCCAGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RPPATQMSRQVT*ACRRRRFPQLV Trigger: GACCAGCTGGGGGAACCGGCGGCGACGGCAAGCCCAAGTGACCTGCCTGCTCATCTGGGTAGCTGGGGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CAA 72 bp | GAGGCCCCCAGCTACCCAGATGAGCAGGCAGGTCACTaGGGCTTGCCGTCGCCGCCGGTTCCCCCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EAPSYPDEQAGH*GLPSPPVPPAG Trigger: ACCAGCTGGGGGAACCGGCGGCGACGGCAAGCCCAAGTGACCTGCCTGCTCATCTGGGTAGCTGGGGGCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CAA 72 bp | CCCAGCTACCCAGATGAGCAGGCAGGTCACTTGGGCTaGCCGTCGCCGCCGGTTCCCCCAGCTGGTCATGGG | + |
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Preference number: 6 (lower is better) Translates to: PSYPDEQAGHLG*PSPPVPPAGHG Trigger: CCCATGACCAGCTGGGGGAACCGGCGGCGACGGCAAGCCCAAGTGACCTGCCTGCTCATCTGGGTAGCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CAA 72 bp | TCCCAGGCTTCCGGGGCGCCCTCGCAGGAGGTGATGTaGGGAGGGGCCTGCTGGCTTTGGTTAGAAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SQASGAPSQEVM*GGACWLWLEGC Trigger: ACAGCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAACATCACCTCCTGCGAGGGCGCCCCGGAAGCCTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS GCA 72 bp | GGGGCGCCCTCGCAGGAGGTGATGTTGGGAGGGGCCTaGTGGCTTTGGTTAGAAGGCTGTAGCTTCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: GAPSQEVMLGGA*WLWLEGCSFSE Trigger: CTCGCTGAAGCTACAGCCTTCTAACCAAAGCCAGCAGGCCCCTCCCAACATCACCTCCTGCGAGGGCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CCA 72 bp | TCACTTGGGCTTGCCGTCGCCGCCGGTTCCCCCAGCTaGTCATGGGGTATACCAGCAACCTGTAGCGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLGLAVAAGSPS*SWGIPATCSGP Trigger: AGGACCGCTACAGGTTGCTGGTATACCCCATGACCAGCTGGGGGAACCGGCGGCGACGGCAAGCCCAAGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CAA 72 bp | CTGATGGCCACCACCAGGAAGATGCTGATGAACAGGTaGGCCTTGATGACCCCGCTGACCACCCGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LMATTRKMLMNR*ALMTPLTTRQR Trigger: CCTCTGCCGGGTGGTCAGCGGGGTCATCAAGGCCAACCTGTTCATCAGCATCTTCCTGGTGGTGGCCATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CAA 72 bp | ACCAGTGTGAGGATCAGCCCCATTGTCTTGCTGTCCTaGGGTCCCCCACACCGGGTTCTGCTGGCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TSVRISPIVLLS*GPPHRVLLASF Trigger: GAAGGAGGCCAGCAGAACCCGGTGTGGGGGACCCAAGGACAGCAAGACAATGGGGCTGATCCTCACACTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS TCA 72 bp | GGATGCAGGCAGAGATGTTCAGATCAGGGACGACTTTaGCGGAACGCAGAAGGAACGTGGGGGTGCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GCRQRCSDQGRL*RNAEGTWGCSR Trigger: TCTTGAGCACCCCCACGTTCCTTCTGCGTTCCGTCAAAGTCGTCCCTGATCTGAACATCTCTGCCTGCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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| CDS CAA 72 bp | AGGATGCAGGCAGAGATGTTCAGATCAGGGACGACTTaGACGGAACGCAGAAGGAACGTGGGGGTGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: RMQAEMFRSGTT*TERRRNVGVLK Trigger: CTTGAGCACCCCCACGTTCCTTCTGCGTTCCGTCAAAGTCGTCCCTGATCTGAACATCTCTGCCTGCATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041229.5 ENSMUST00000182899.2 ENSMUST00000183086.2 |
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