Pregenerated sensors for BDH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046598Ensembl transcript IDs: ENSMUST00000089759.9, ENSMUST00000115226.8, ENSMUST00000115227.10, ENSMUST00000149039.2, ENSMUST00000232433.2
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCTCATAGCGCAGGCAGTCCGAGAAAGCCTCGATCCCAAACTTGGTaGTGCAGTATGGCGAGCGGGCGGGGTTGGCCATGCGGCCCAGCA | + |
Preference number: 1 (lower is better) Translates to: SHSAGSPRKPRSQTW*CSMASGRGWPCGPA Trigger: TGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCCATACTGCATCACCAAGTTTGGGATCGAGGCTTTCTCGGACTGCCTGCGCTATGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 90 bp | CAGGCAGTCCGAGAAAGCCTCGATCCCAAACTTGGTGATGCAGTATaGCGAGCGGGCGGGGTTGGCCATGCGGCCCAGCATGCTGCTGAT | + |
Preference number: 1 (lower is better) Translates to: QAVRESLDPKLGDAV*RAGGVGHAAQHAAD Trigger: ATCAGCAGCATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCCATACTGCATCACCAAGTTTGGGATCGAGGCTTTCTCGGACTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 90 bp | CATAGTCCTTGCGGACGACCTCAGGCAGGTCATCCCACATCTTCTTaGCGATGGCCTGGATGCGCTCGGGGCTGTAGAGACTGGTGGCCG | + |
Preference number: 1 (lower is better) Translates to: HSPCGRPQAGHPTSS*RWPGCARGCRDWWP Trigger: CGGCCACCAGTCTCTACAGCCCCGAGCGCATCCAGGCCATCGCCAAGAAGATGTGGGATGACCTGCCTGAGGTCGTCCGCAAGGACTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR GCA 90 bp | AGAGTCACAGCCTGTGATCAGGATAGCTTTGCCACTAGCCGCATCTaGCTGACTGGCGTAGGTCCGACGGGTGTCAGGGCTGAAGGATGC | + |
Preference number: 1 (lower is better) Translates to: RVTACDQDSFATSRI*LTGVGPTGVRAEGC Trigger: GCATCCTTCAGCCCTGACACCCGTCGGACCTACGCCAGTCAGGCAGATGCGGCTAGTGGCAAAGCTATCCTGATCACAGGCTGTGACTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 90 bp | ACAAATGCATCCCGCTGTCAGGTAAATTCGTGGACCCTGGGGCCCTaGCTCCCTCTCACCTTCCCTCTCAGGCCCTATCTACTTTGCTTT | + |
Preference number: 1 (lower is better) Translates to: TNASRCQVNSWTLGP*LPLTFPLRPYLLCF Trigger: AAAGCAAAGTAGATAGGGCCTGAGAGGGAAGGTGAGAGGGAGCCAGGGCCCCAGGGTCCACGAATTTACCTGACAGCGGGATGCATTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR GCA 90 bp | CCTTTGCTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTaGCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCT | + |
Preference number: 1 (lower is better) Translates to: PLLSPGAGLQFQARH*QECRIGFQGGLCSS Trigger: AGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAGCAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 90 bp | GAGAATGTCAAGATCTCAGCTGAAAAGTCTCTGGATTCCCCCACCTaGAGCCAGCAGAGAGTCACTGACTGCTGGCCACCAGTCACACAG | + |
Preference number: 1 (lower is better) Translates to: ENVKISAEKSLDSPT*SQQRVTDCWPPVTQ Trigger: CTGTGTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAATCCAGAGACTTTTCAGCTGAGATCTTGACATTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR TCA 90 bp | CTCCTTATATGTCTCCATGCTGGTGAACTCCACCTCCCCAAACGTTaGGATGCCTGCGTTGTTAACCAGGCCCCACATTCCCTTCTCAGG | + |
Preference number: 1 (lower is better) Translates to: LLICLHAGELHLPKR*DACVVNQAPHSLLR Trigger: CCTGAGAAGGGAATGTGGGGCCTGGTTAACAACGCAGGCATCTCAACGTTTGGGGAGGTGGAGTTCACCAGCATGGAGACATATAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 90 bp | CACACAGAGCTACGGACGCACAGAGACATAGCACACAGTGACCTTTaGTGTGACTGGCTCAGGAGAAGGTACAGAGTTGGTCACAGGGTT | + |
Preference number: 1 (lower is better) Translates to: HTELRTHRDIAHSDL*CDWLRRRYRVGHRV Trigger: AACCCTGTGACCAACTCTGTACCTTCTCCTGAGCCAGTCACACCAAAGGTCACTGTGTGCTATGTCTCTGTGCGTCCGTAGCTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 90 bp | GTCTCCACCGCCTTCTCCACCTCTTCACTGTTGCAGACATTGAGCTaGATGGTTCTCAGTCGGTCACTCTTCAAGCTGTCCAGTTCCTTG | + |
Preference number: 1 (lower is better) Translates to: VSTAFSTSSLLQTLS*MVLSRSLFKLSSSL Trigger: CAAGGAACTGGACAGCTTGAAGAGTGACCGACTGAGAACCATCCAGCTCAATGTCTGCAACAGTGAAGAGGTGGAGAAGGCGGTGGAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR TCA 90 bp | CTGGCTCCCTCTCACCTTCCCTCTCAGGCCCTATCTACTTTGCTTTaGAGACAGGAGCTAGAACAGTGCACCTCTGTTTGTATCCAGAGG | + |
Preference number: 1 (lower is better) Translates to: LAPSHLPSQALSTLL*RQELEQCTSVCIQR Trigger: CCTCTGGATACAAACAGAGGTGCACTGTTCTAGCTCCTGTCTTCAAAGCAAAGTAGATAGGGCCTGAGAGGGAAGGTGAGAGGGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR TCA 90 bp | AGGGTTACTGGACTGATGGGTTCAAGTGTCTGTGGGACACAAATGTaGTTTGCCTTTGCCGTAACACTGGCGGGACTCCGTGGACACAAT | + |
Preference number: 1 (lower is better) Translates to: RVTGLMGSSVCGTQM*FAFAVTLAGLRGHN Trigger: ATTGTGTCCACGGAGTCCCGCCAGTGTTACGGCAAAGGCAAATCACATTTGTGTCCCACAGACACTTGAACCCATCAGTCCAGTAACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 90 bp | CAGAGTTGGTCACAGGGTTACTGGACTGATGGGTTCAAGTGTCTGTaGGACACAAATGTGATTTGCCTTTGCCGTAACACTGGCGGGACT | + |
Preference number: 1 (lower is better) Translates to: QSWSQGYWTDGFKCL*DTNVICLCRNTGGT Trigger: AGTCCCGCCAGTGTTACGGCAAAGGCAAATCACATTTGTGTCCCACAGACACTTGAACCCATCAGTCCAGTAACCCTGTGACCAACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR TCA 90 bp | GCTGGATGGTTCTCAGTCGGTCACTCTTCAAGCTGTCCAGTTCCTTaGCCCCAGCATCACCTTTGTCCTTCATCAAACAGCCAGCAAATA | + |
Preference number: 1 (lower is better) Translates to: AGWFSVGHSSSCPVP*PQHHLCPSSNSQQI Trigger: TATTTGCTGGCTGTTTGATGAAGGACAAAGGTGATGCTGGGGTCAAGGAACTGGACAGCTTGAAGAGTGACCGACTGAGAACCATCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 90 bp | CTCGAATCTTTAATGAGAATGTCAAGATCTCAGCTGAAAAGTCTCTaGATTCCCCCACCTGGAGCCAGCAGAGAGTCACTGACTGCTGGC | + |
Preference number: 1 (lower is better) Translates to: LESLMRMSRSQLKSL*IPPPGASRESLTAG Trigger: GCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAATCCAGAGACTTTTCAGCTGAGATCTTGACATTCTCATTAAAGATTCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR TCA 90 bp | AGTGTATGTAGATCTTGTCAGAGATGGCTCCAGGAAAATGGGTCATaGTCTGCATCCGAAGCCACCAGTAGTAGTCCATGGGATGGTAGC | + |
Preference number: 1 (lower is better) Translates to: SVCRSCQRWLQENGS*SASEATSSSPWDGS Trigger: GCTACCATCCCATGGACTACTACTGGTGGCTTCGGATGCAGATCATGACCCATTTTCCTGGAGCCATCTCTGACAAGATCTACATACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR GCA 90 bp | TTGTCCTTCATCAAACAGCCAGCAAATACAAGGAAGCCTTTTGAGTaGAGATGCTTGGCCAGTGAGAACCCAAATCCAGAGTCACAGCCT | + |
Preference number: 1 (lower is better) Translates to: LSFIKQPANTRKPFE*RCLASENPNPESQP Trigger: AGGCTGTGACTCTGGATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCTTGTATTTGCTGGCTGTTTGATGAAGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR TCA 90 bp | TTTATTAAACACGGATACAAATTCTCCCAAGGTGTAAAATGCCACTaGAAGACGCCAGCAGGAGGCAGGCTCTGCAGTACAAATGCATCC | + |
Preference number: 1 (lower is better) Translates to: FIKHGYKFSQGVKCH*KTPAGGRLCSTNAS Trigger: GGATGCATTTGTACTGCAGAGCCTGCCTCCTGCTGGCGTCTTTCAGTGGCATTTTACACCTTGGGAGAATTTGTATCCGTGTTTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CAA 90 bp | GCCTCGATCCCAAACTTGGTGATGCAGTATGGCGAGCGGGCGGGGTaGGCCATGCGGCCCAGCATGCTGCTGATGTTAACGACGCGACCT | + |
Preference number: 2 (lower is better) Translates to: ASIPNLVMQYGERAG*AMRPSMLLMLTTRP Trigger: AGGTCGCGTCGTTAACATCAGCAGCATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCCATACTGCATCACCAAGTTTGGGATCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | TGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTTCTCCTGGCGCTGGGCTTCTCCTGCCATAGTCCTTaGGGACGACCTCAGGCAGGT | + |
Preference number: 2 (lower is better) Translates to: CTRLWLSRFLCFLLALGFSCHSP*GRPQAG Trigger: ACCTGCCTGAGGTCGTCCGCAAGGACTATGGCAGGA...GAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | AGCACCATATTGGCCCTGAGGTTTAGGGCCACCCACCTGCGCCCTCCGCCCGCCCCACCTGGAACGTGGTaGGATTTGGTTTGGATCCAA | + |
Preference number: 2 (lower is better) Translates to: STILALRFRATHLRPPPAPPGTW*DLVWIQ Trigger: TTGGATCCAAACCAAATCCCACCACGTTCCAGGTGG...GGCGGGCGGAGGGCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | TCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTCGGCCCAAGACTTGCTaGCACCTGGAACGTGGTGGG | + |
Preference number: 2 (lower is better) Translates to: SLSQHCLHPPVAVQVPLLRPKTC*HLERGG Trigger: CCCACCACGTTCCAGGTGGCAGCAAGTCTTGGGCCG...AAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | TGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTTCTCCTGGCGCTGGGCTTCCAGCCTTGGCACCACTaGTCTGTTTGCAGCACCAAG | + |
Preference number: 2 (lower is better) Translates to: CTRLWLSRFLCFLLALGFQPWHH*SVCSTK Trigger: CTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTG...GAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | ATTCCCCCACCTGGAGCCAGCAGAGAGTCACTGACTGCTGGCCACCAGTCACACCTCAGTGCCCAGCCTTaGCACCACTGGTCTGTTTGC | + |
Preference number: 2 (lower is better) Translates to: IPPPGASRESLTAGHQSHLSAQP*HHWSVC Trigger: GCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAG...GTGTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CAA 90 bp | TTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTaGCTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTGC | + |
Preference number: 2 (lower is better) Translates to: LSQHCLHPPVAVQVP*LSPGAGLQFQARHC Trigger: GCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | TCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTCCAGCAGAGAGTCACTaGCTGCTGGCCACCAGTCAC | + |
Preference number: 2 (lower is better) Translates to: SLSQHCLHPPVAVQVPLLPAESH*LLATSH Trigger: GTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGG...AAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CAA 90 bp | TTGGCCATGCGGCCCAGCATGCTGCTGATGTTAACGACGCGACCTTaGGCTCTTCGGAGAAGGGGAAGGAAGGATTTTGTGGTGCGCACG | + |
Preference number: 2 (lower is better) Translates to: LAMRPSMLLMLTTRP*ALRRRGRKDFVVRT Trigger: CGTGCGCACCACAAAATCCTTCCTTCCCCTTCTCCGAAGAGCCAAAGGTCGCGTCGTTAACATCAGCAGCATGCTGGGCCGCATGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | CTAGACACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCCGGCCCAAGACTTGCTaGCACCTGGAACGTGGTGGG | + |
Preference number: 2 (lower is better) Translates to: LDTARSVGSVSKGVFALLRPKTC*HLERGG Trigger: CCCACCACGTTCCAGGTGGCAGCAAGTCTTGGGCCG...GAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | TGTCTCAGTGCCCAGCCTTGGCACCACTGGTCTGTTTGCAGCACCAAGCATAGCTGTGGGAGCACCACATaGGCACACAAGACAACAGGC | + |
Preference number: 2 (lower is better) Translates to: CLSAQPWHHWSVCSTKHSCGSTT*AHKTTG Trigger: GCCTGTTGTCTTGTGTGCTCATGTGGTGCTCCCACA...GCTATGCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | TGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTTCTCCTGGCGCTGGGCTTCTTCCAAGGGGGTCTTTaGTCTTCTCTTTGTTCCCTG | + |
Preference number: 2 (lower is better) Translates to: CTRLWLSRFLCFLLALGFFQGGL*SSLCSL Trigger: CAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAA...GAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | GTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGCTTGGTGATGCAGTATaGCGAGCGGGCGGGGTTGGC | + |
Preference number: 2 (lower is better) Translates to: VSKGVFALLFVPWQCPSRLGDAV*RAGGVG Trigger: GCCAACCCCGCCCGCTCGCCATACTGCATCACCAAG...CCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | AAGACCCCAAGTTTGTGTGAACGAAAACGCCCGGGCCTGAGCAGGCTCCAGTTGACAGGGTTACTGGACTaGTGGGTTCAAGTGTCTGTG | + |
Preference number: 2 (lower is better) Translates to: KTPSLCERKRPGLSRLQLTGLLD*WVQVSV Trigger: CACAGACACTTGAACCCATCAGTCCAGTAACCCTGT...CAACTGGAGCCTGCTCAGGCCCGGGCGTTTTCGTTCACACAAACTTGGGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | GTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCGGCAGGCTGAATCGATCCCAAACTTGGTaGTGCAGTATGGCGAGCGGG | + |
Preference number: 2 (lower is better) Translates to: VHLCLYPEGLKAQTGRLNRSQTW*CSMASG Trigger: CCCGCTCGCCATACTGCATCACCAAGTTTGGGATCG...ATTCAGCCTGCCGGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | TGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTTCTCCTGGCGCTGGGCTTCCAAGCAGCCTTCAAATaGAAAAGTCCCTTGATTGAG | + |
Preference number: 2 (lower is better) Translates to: CTRLWLSRFLCFLLALGFQAAFK*KSPLIE Trigger: CTCAATCAAGGGACTTTTGCATTTGAAGGCTGCTTG...GAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | CTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTGCCAGGAGTGTAGGAGGAAGCCTTTTGAGTaGAGATGCTTGGCCAGTGAG | + |
Preference number: 2 (lower is better) Translates to: LSPGAGLQFQARHCQECRRKPFE*RCLASE Trigger: CTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCT...CCTACACTCCTGGCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | TGCTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTGCCAGGAGTGTAGCACACAGTGACCTTTaGTGTGACTGGCTCAGGAGA | + |
Preference number: 2 (lower is better) Translates to: CFLLALGFSFRLDTARSVAHSDL*CDWLRR Trigger: TCTCCTGAGCCAGTCACACCAAAGGTCACTGTGTGC...TACACTCCTGGCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | ATGTGGGAGCACCACATGAGCACACAAGACAACAGGCATCTAGACCCATTGCTGCTGGATTCCCCCACCTaGAGCCAGCAGAGAGTCACT | + |
Preference number: 2 (lower is better) Translates to: MWEHHMSTQDNRHLDPLLLDSPT*SQQRVT Trigger: AGTGACTCTCTGCTGGCTCCAGGTGGGGGAATCCAG...CAGCAATGGGTCTAGATGCCTGTTGTCTTGTGTGCTCATGTGGTGCTCCCACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | GCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAGGACTCAGTGCCCAGCCTTaGCACCACTGGTCTGTTTGC | + |
Preference number: 2 (lower is better) Translates to: ATWNVVGFGLDPNTETLGLSAQP*HHWSVC Trigger: GCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAG...TCCTAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | TCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTCCACCTGGAACGTGGTaGGATTTGGTTTGGATCCAA | + |
Preference number: 2 (lower is better) Translates to: SLSQHCLHPPVAVQVPLLPPGTW*DLVWIQ Trigger: TTGGATCCAAACCAAATCCCACCACGTTCCAGGTGG...AAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTTTGAGTGCAGATGCTTaGCCAGTGAGAACCCAAATC | + |
Preference number: 2 (lower is better) Translates to: TLFVSALPAPACGCPGSFLSADA*PVRTQI Trigger: GATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAA...AAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTATGGCTCCAGGAAAATaGGTCATGATCTGCATCCGA | + |
Preference number: 2 (lower is better) Translates to: TLFVSALPAPACGCPGSFMAPGK*VMICIR Trigger: TCGGATGCAGATCATGACCCATTTTCCTGGAGCCAT...AAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | AAGACCCCAAGTTTGTGTGAACGAAAACGCCCGGGCCTGAGCAGGCTCCAGTTGTTGCAGACATTGAGCTaGATGGTTCTCAGTCGGTCA | + |
Preference number: 2 (lower is better) Translates to: KTPSLCERKRPGLSRLQLLQTLS*MVLSRS Trigger: TGACCGACTGAGAACCATCCAGCTCAATGTCTGCAA...CAACTGGAGCCTGCTCAGGCCCGGGCGTTTTCGTTCACACAAACTTGGGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | AAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGTGGTCACATCCCACATCTTCTTaGCGATGGCCTGGATGCGCT | + |
Preference number: 2 (lower is better) Translates to: KGVFALLFVPWQCPSRWSHPTSS*RWPGCA Trigger: AGCGCATCCAGGCCATCGCCAAGAAGATGTGGGATG...TGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | GGAGCTAGAACAGTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCCAGATGCTTGGCCAGTaGGAACCCAAATCCAGAGTC | + |
Preference number: 2 (lower is better) Translates to: GARTVHLCLYPEGLKAQTQMLGQ*EPKSRV Trigger: GACTCTGGATTTGGGTTCTCACTGGCCAAGCATCTG...GGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCACTGTTCTAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | TCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTGGCAGTCCTAGACTTTaGAACAAGATGCACAAAAGT | + |
Preference number: 2 (lower is better) Translates to: SLSQHCLHPPVAVQVPLLGSPRL*NKMHKS Trigger: ACTTTTGTGCATCTTGTTGCAAAGTCTAGGACTGCC...AAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | CAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGTTTCAGGCTAGACACTaGCAGGAGTGTAGGATCGGT | + |
Preference number: 2 (lower is better) Translates to: QECRIGFQGGLCSSLCSLFQARH*QECRIG Trigger: ACCGATCCTACACTCCTGGCAGTGTCTAGCCTGAAA...CAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CCA 90 bp | GCTGCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTACTTCTCTTTGTTCCCTaGCAGTGTCCAAGTAGGTGG | + |
Preference number: 2 (lower is better) Translates to: AATWNVVGFGLDPNTETLLLFVP*QCPSRW Trigger: CCACCTACTTGGACACTGCCAGGGAACAAAGAGAAG...TAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CCA 90 bp | TTCAAATGCAAAAGTCCCTTGATTGAGAACACAGGCTCTCTAACTGTGTCTCAGGCCTGCACCCGCCTGTaGCTGTCCAGGTTCCTTTGC | + |
Preference number: 2 (lower is better) Translates to: FKCKSPLIENTGSLTVSQACTRL*LSRFLC Trigger: GCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGC...CTGAGACACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCATTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR CAA 90 bp | AGCTGGATGGTTCTCAGTCGGTCACTCTTCAAGCTGTCCAGTTCCTaGACCCCAGCATCACCTTTGTCCTTCATCAAACAGCCAGCAAAT | + |
Preference number: 2 (lower is better) Translates to: SWMVLSRSLFKLSSS*TPASPLSFIKQPAN Trigger: ATTTGCTGGCTGTTTGATGAAGGACAAAGGTGATGCTGGGGTCAAGGAACTGGACAGCTTGAAGAGTGACCGACTGAGAACCATCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | CAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGACTCCGTGGACACAATaGAAGAGGTGTCTCGTATGT | + |
Preference number: 2 (lower is better) Translates to: QECRIGFQGGLCSSLCSLTPWTQ*KRCLVC Trigger: ACATACGAGACACCTCTTTCATTGTGTCCACGGAGT...CAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR TCA 90 bp | GCAGCCTTCAAATGCAAAAGTCCCTTGATTGAGAACACAGGCTCTCTAACTGTGTGTGGGAGCACCACATaGGCACACAAGACAACAGGC | + |
Preference number: 2 (lower is better) Translates to: AAFKCKSPLIENTGSLTVCGSTT*AHKTTG Trigger: GCCTGTTGTCTTGTGTGCTCATGTGGTGCTCCCACA...CACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCATTTGAAGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR GCA 90 bp | GGAGCTAGAACAGTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCTTTCAGGCTAGACACTaGCAGGAGTGTAGGATCGGT | + |
Preference number: 2 (lower is better) Translates to: GARTVHLCLYPEGLKAQTFQARH*QECRIG Trigger: ACCGATCCTACACTCCTGGCAGTGTCTAGCCTGAAA...GGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCACTGTTCTAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CCA 90 bp | GCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAGGAGAGAAGGTACAGAGTTaGTCACAGGGTTACTGGACT | + |
Preference number: 2 (lower is better) Translates to: ATWNVVGFGLDPNTETLGEKVQS*SQGYWT Trigger: AGTCCAGTAACCCTGTGACCAACTCTGTACCTTCTC...TCCTAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR TCA 90 bp | ACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTACTCCGTGGACACAATaGAAGAGGTGTCTCGTATGT | + |
Preference number: 2 (lower is better) Translates to: TARSVGSVSKGVFALLFVTPWTQ*KRCLVC Trigger: ACATACGAGACACCTCTTTCATTGTGTCCACGGAGT...AACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR TCA 90 bp | CTAGACACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGGATCCAAATACTaGGACCCTAGGAAACTTCAG | + |
Preference number: 2 (lower is better) Translates to: LDTARSVGSVSKGVFALLFGSKY*DPRKLQ Trigger: CTGAAGTTTCCTAGGGTCTCAGTATTTGGATCCAAA...GAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | CTAGACACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCGTCTCGTATGTCCTCTaGGATCTGCAAATTCTTTCA | + |
Preference number: 2 (lower is better) Translates to: LDTARSVGSVSKGVFALLVSYVL*DLQILS Trigger: TGAAAGAATTTGCAGATCGCAGAGGACATACGAGAC...GAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | TTCAAATGCAAAAGTCCCTTGATTGAGAACACAGGCTCTCTAACTGTGTCTCAGCTGTCCAGGTTCCTTTaGTTTCTCCTGGCGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: FKCKSPLIENTGSLTVSQLSRFL*FLLALG Trigger: GCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAG...CTGAGACACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCATTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGATACAGATTTCGAATaGATGTTTTGGCTGGAAAAT | + |
Preference number: 2 (lower is better) Translates to: TLFVSALPAPACGCPGSFDTDFE*MFWLEN Trigger: ATTTTCCAGCCAAAACATCCATTCGAAATCTGTATC...AAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | GCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAGGAGGGTTCAAGTGTCTGTaGGACACAAATGTGATTTGC | + |
Preference number: 2 (lower is better) Translates to: ATWNVVGFGLDPNTETLGGFKCL*DTNVIC Trigger: GCAAATCACATTTGTGTCCCACAGACACTTGAACCC...TCCTAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | GCTGCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAAGGGCTGAAGGATGCTaGATAAAACAACAGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: AATWNVVGFGLDPNTETLRAEGC*IKQQCV Trigger: CACACACTGTTGTTTTATCCAGCATCCTTCAGCCCT...TAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | GCTGCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAAGATCTTGTCAGAGATaGCTCCAGGAAAATGGGTCA | + |
Preference number: 2 (lower is better) Translates to: AATWNVVGFGLDPNTETLRSCQR*LQENGS Trigger: TGACCCATTTTCCTGGAGCCATCTCTGACAAGATCT...TAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR-3UTR GCA 90 bp | GTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCGGCAGGCTGAATGTCTCGTATGTCCTCTaGGATCTGCAAATTCTTTCA | + |
Preference number: 2 (lower is better) Translates to: VHLCLYPEGLKAQTGRLNVSYVL*DLQILS Trigger: TGAAAGAATTTGCAGATCGCAGAGGACATACGAGAC...ATTCAGCCTGCCGGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR GCA 90 bp | AAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGTGGTCAGGCAGTCCTAGACTTTaGAACAAGATGCACAAAAGT | + |
Preference number: 2 (lower is better) Translates to: KGVFALLFVPWQCPSRWSGSPRL*NKMHKS Trigger: ACTTTTGTGCATCTTGTTGCAAAGTCTAGGACTGCC...TGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | AGGAAGGATTTTGTGGTGCGCACGGTTCCCCAGAGGTTCACTTCAGCCACCTCCGATACAGATTTCGAATaGATGTTTTGGCTGGAAAAT | + |
Preference number: 2 (lower is better) Translates to: RKDFVVRTVPQRFTSATSDTDFE*MFWLEN Trigger: ATTTTCCAGCCAAAACATCCATTCGAAATCTGTATC...GGAGGTGGCTGAAGTGAACCTCTGGGGAACCGTGCGCACCACAAAATCCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCGCACCATATTGGCCCTaGGGTTTAGGGCCACCCACC | + |
Preference number: 2 (lower is better) Translates to: SVLFTHETYIRIKWDTDFAPYWP*GLGPPT Trigger: GGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGC...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | GCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAGGAAGTAGGTTTCCATCTTaGCAATCTTTTCATCGAAGT | + |
Preference number: 2 (lower is better) Translates to: ATWNVVGFGLDPNTETLGSRFPS*QSFHRS Trigger: ACTTCGATGAAAAGATTGCCAAGATGGAAACCTACT...TCCTAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR TCA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCGACGGGTGTCAGGGCTaGAGGATGCTGGATAAAACA | + |
Preference number: 2 (lower is better) Translates to: SVLFTHETYIRIKWDTDFDGCQG*RMLDKT Trigger: TGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTC...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CCA 90 bp | CAGCATCTTCACCCAGACCTAACTCGAATCTTTAATGAGAATGTCAAGATCTCAGGGTTCAAGTGTCTGTaGGACACAAATGTGATTTGC | + |
Preference number: 2 (lower is better) Translates to: QHLHPDLTRIFNENVKISGFKCL*DTNVIC Trigger: GCAAATCACATTTGTGTCCCACAGACACTTGAACCC...TGAGATCTTGACATTCTCATTAAAGATTCGAGTTAGGTCTGGGTGAAGATGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | TCCCCCACCTGGAGCCAGCAGAGAGTCACTGACTGCTaGCCACCAGTCACACAGAGCTACGGACGCACAGAG | + |
Preference number: 3 (lower is better) Translates to: SPTWSQQRVTDC*PPVTQSYGRTE Trigger: CTCTGTGCGTCCGTAGCTCTGTGTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | CGAGAAAGCCTCGATCCCAAACTTGGTGATGCAGTATaGCGAGCGGGCGGGGTTGGCCATGCGGCCCAGCAT | + |
Preference number: 3 (lower is better) Translates to: RESLDPKLGDAV*RAGGVGHAAQH Trigger: ATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCCATACTGCATCACCAAGTTTGGGATCGAGGCTTTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 72 bp | TGCGGACGACCTCAGGCAGGTCATCCCACATCTTCTTaGCGATGGCCTGGATGCGCTCGGGGCTGTAGAGAC | + |
Preference number: 3 (lower is better) Translates to: CGRPQAGHPTSS*RWPGCARGCRD Trigger: GTCTCTACAGCCCCGAGCGCATCCAGGCCATCGCCAAGAAGATGTGGGATGACCTGCCTGAGGTCGTCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | ACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTGGCGAGCGGGCGGGGTaGGCCATGCGGCCCAGCATG | + |
Preference number: 3 (lower is better) Translates to: TARSVGSVSKGVFALLFVGERAG*AMRPSM Trigger: CATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCC...AACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR TCA 72 bp | TCTGGATTCCCCCACCTGGAGCCAGCAGAGAGTCACTaGCTGCTGGCCACCAGTCACACAGAGCTACGGACG | + |
Preference number: 3 (lower is better) Translates to: SGFPHLEPAESH*LLATSHTELRT Trigger: CGTCCGTAGCTCTGTGTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAATCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR GCA 72 bp | GATTCCCCCACCTGGAGCCAGCAGAGAGTCACTGACTaGTGGCCACCAGTCACACAGAGCTACGGACGCACA | + |
Preference number: 3 (lower is better) Translates to: DSPTWSQQRVTD*WPPVTQSYGRT Trigger: TGTGCGTCCGTAGCTCTGTGTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTaGCGGAGACCGAAGGGACCTCTTCAGCTCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: PSPHLSPSHQVP*RRPKGPLQLFS Trigger: ACTGAAGAGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR GCA 72 bp | ACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTaGTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTA | + |
Preference number: 3 (lower is better) Translates to: TACTRLWLSRFL*FLLALGFSFRL Trigger: TAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | TGCTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTGCCAGGAGTGTAGCTGTCCAGGTTCCTTaGCTTTCTCCTGGCGCTGGG | + |
Preference number: 3 (lower is better) Translates to: CFLLALGFSFRLDTARSVAVQVP*LSPGAG Trigger: CCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGC...TACACTCCTGGCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR GCA 72 bp | TGTCTCAGTGCCCAGCCTTGGCACCACTGGTCTGTTTaGAGCACCAAGCATAGCACCAATCCTGTCCTAGGC | + |
Preference number: 3 (lower is better) Translates to: CLSAQPWHHWSV*STKHSTNPVLG Trigger: GCCTAGGACAGGATTGGTGCTATGCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR GCA 72 bp | TCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTaGCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTT | + |
Preference number: 3 (lower is better) Translates to: SPGAGLQFQARH*QECRIGFQGGL Trigger: AAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | CTGGGCAAGTGTCTCAGTGCCCAGCCTTGGCACCACTaGTCTGTTTGCAGCACCAAGCATAGCACCAATCCT | + |
Preference number: 3 (lower is better) Translates to: LGKCLSAQPWHH*SVCSTKHSTNP Trigger: AGGATTGGTGCTATGCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACACTTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR TCA 72 bp | TGTCTCCATGCTGGTGAACTCCACCTCCCCAAACGTTaGGATGCCTGCGTTGTTAACCAGGCCCCACATTCC | + |
Preference number: 3 (lower is better) Translates to: CLHAGELHLPKR*DACVVNQAPHS Trigger: GGAATGTGGGGCCTGGTTAACAACGCAGGCATCTCAACGTTTGGGGAGGTGGAGTTCACCAGCATGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CCA 72 bp | AAGATCTCAGCTGAAAAGTCTCTGGATTCCCCCACCTaGAGCCAGCAGAGAGTCACTGACTGCTGGCCACCA | + |
Preference number: 3 (lower is better) Translates to: KISAEKSLDSPT*SQQRVTDCWPP Trigger: TGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAATCCAGAGACTTTTCAGCTGAGATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | CAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGTCTGTGGGACCCTCTTaGTCTCAGCACTGCCTGCAC | + |
Preference number: 3 (lower is better) Translates to: QECRIGFQGGLCSSLCSLSVGPS*SQHCLH Trigger: GTGCAGGCAGTGCTGAGACAAAGAGGGTCCCACAGA...CAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR TCA 72 bp | CTGCCTGACTGGCGTAGGTCCGACGGGTGTCAGGGCTaGAGGATGCTGGATAAAACAACAGTGTGTGTCTTA | + |
Preference number: 3 (lower is better) Translates to: LPDWRRSDGCQG*RMLDKTTVCVL Trigger: TAAGACACACACTGTTGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTCGGACCTACGCCAGTCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | CTTTCTCCTGGCGCTGGGCTTCAGTTTCAGGCTAGACACTGCCAGGAGTGTAGGTCTTTGCTCTTCTCTTaGTTCCCTGGCAGTGTCCAA | + |
Preference number: 3 (lower is better) Translates to: LSPGAGLQFQARHCQECRSLLFS*FPGSVQ Trigger: TTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGA...CCTACACTCCTGGCAGTGTCTAGCCTGAAACTGAAGCCCAGCGCCAGGAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | AAGACCCCAAGTTTGTGTGAACGAAAACGCCCGGGCCTGAGCAGGCTCCAGTTGATACAAGGAAGCCTTTaGAGTGCAGATGCTTGGCCA | + |
Preference number: 3 (lower is better) Translates to: KTPSLCERKRPGLSRLQLIQGSL*SADAWP Trigger: TGGCCAAGCATCTGCACTCAAAAGGCTTCCTTGTAT...CAACTGGAGCCTGCTCAGGCCCGGGCGTTTTCGTTCACACAAACTTGGGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR TCA 72 bp | GGACTGATGGGTTCAAGTGTCTGTGGGACACAAATGTaGTTTGCCTTTGCCGTAACACTGGCGGGACTCCGT | + |
Preference number: 3 (lower is better) Translates to: GLMGSSVCGTQM*FAFAVTLAGLR Trigger: ACGGAGTCCCGCCAGTGTTACGGCAAAGGCAAATCACATTTGTGTCCCACAGACACTTGAACCCATCAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR GCA 72 bp | GATGGGTTCAAGTGTCTGTGGGACACAAATGTGATTTaGCTTTGCCGTAACACTGGCGGGACTCCGTGGACA | + |
Preference number: 3 (lower is better) Translates to: DGFKCLWDTNVI*LCRNTGGTPWT Trigger: TGTCCACGGAGTCCCGCCAGTGTTACGGCAAAGGCAAATCACATTTGTGTCCCACAGACACTTGAACCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | CTACGGACGCACAGAGACATAGCACACAGTGACCTTTaGTGTGACTGGCTCAGGAGAAGGTACAGAGTTGGT | + |
Preference number: 3 (lower is better) Translates to: LRTHRDIAHSDL*CDWLRRRYRVG Trigger: ACCAACTCTGTACCTTCTCCTGAGCCAGTCACACCAAAGGTCACTGTGTGCTATGTCTCTGTGCGTCCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | AAATACCCGGCCCAAGACTTGCTGCCACCTGGAACGTaGTGGGATTTGGTTTGGATCCAAATACTGAGACCC | + |
Preference number: 3 (lower is better) Translates to: KYPAQDLLPPGT*WDLVWIQILRP Trigger: GGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGCAGCAAGTCTTGGGCCGGGTATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CCA 72 bp | GCCTTCTCCACCTCTTCACTGTTGCAGACATTGAGCTaGATGGTTCTCAGTCGGTCACTCTTCAAGCTGTCC | + |
Preference number: 3 (lower is better) Translates to: AFSTSSLLQTLS*MVLSRSLFKLS Trigger: GGACAGCTTGAAGAGTGACCGACTGAGAACCATCCAGCTCAATGTCTGCAACAGTGAAGAGGTGGAGAAGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | TGTCTCAGTGCCCAGCCTTGGCACCACTGGTCTGTTTGCAGCACCAAGCATAGCACAGTGCACCTCTGTTaGTATCCAGAGGGGTTAAAA | + |
Preference number: 3 (lower is better) Translates to: CLSAQPWHHWSVCSTKHSTVHLC*YPEGLK Trigger: TTTTAACCCCTCTGGATACAAACAGAGGTGCACTGT...GCTATGCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | GCTGCCACCTGGAACGTGGTGGGATTTGGTTTGGATCCAAATACTGAGACCCTAGCGTGTGTGACAGCGTaGATGACAGAGGAAGTATCT | + |
Preference number: 3 (lower is better) Translates to: AATWNVVGFGLDPNTETLACVTA*MTEEVS Trigger: AGATACTTCCTCTGTCATCAACGCTGTCACACACGC...TAGGGTCTCAGTATTTGGATCCAAACCAAATCCCACCACGTTCCAGGTGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR TCA 72 bp | CACGGATACAAATTCTCCCAAGGTGTAAAATGCCACTaGAAGACGCCAGCAGGAGGCAGGCTCTGCAGTACA | + |
Preference number: 3 (lower is better) Translates to: HGYKFSQGVKCH*KTPAGGRLCST Trigger: TGTACTGCAGAGCCTGCCTCCTGCTGGCGTCTTTCAGTGGCATTTTACACCTTGGGAGAATTTGTATCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | GTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCGGCAGGCTGAATGGAACGTGGTGGGATTaGGTTTGGATCCAAATACTG | + |
Preference number: 3 (lower is better) Translates to: VHLCLYPEGLKAQTGRLNGTWWD*VWIQIL Trigger: CAGTATTTGGATCCAAACCAAATCCCACCACGTTCC...ATTCAGCCTGCCGGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | GTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGTTTGAGTGCAGATGCTaGGCCAGTGAGAACCCAAAT | + |
Preference number: 3 (lower is better) Translates to: VSKGVFALLFVPWQCPSRFECRC*ASENPN Trigger: ATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAA...CCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR TCA 72 bp | CCTGAAGTCTATGGAGCAGGTGTGTGTGTGTGTGTGTaGTGTGTGTGTGTGTGTGTGATGTGTGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: PEVYGAGVCVCV*CVCVCVMCVCV Trigger: CACACACACACACATCACACACACACACACACATCACACACACACACACACACCTGCTCCATAGACTTCAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR TCA 72 bp | TTCTCAGTCGGTCACTCTTCAAGCTGTCCAGTTCCTTaGCCCCAGCATCACCTTTGTCCTTCATCAAACAGC | + |
Preference number: 3 (lower is better) Translates to: FSVGHSSSCPVP*PQHHLCPSSNS Trigger: GCTGTTTGATGAAGGACAAAGGTGATGCTGGGGTCAAGGAACTGGACAGCTTGAAGAGTGACCGACTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR TCA 72 bp | AGATCTTGTCAGAGATGGCTCCAGGAAAATGGGTCATaGTCTGCATCCGAAGCCACCAGTAGTAGTCCATGG | + |
Preference number: 3 (lower is better) Translates to: RSCQRWLQENGS*SASEATSSSPW Trigger: CCATGGACTACTACTGGTGGCTTCGGATGCAGATCATGACCCATTTTCCTGGAGCCATCTCTGACAAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR CCA 72 bp | GCTCAGGAGAAGGTACAGAGTTGGTCACAGGGTTACTaGACTGATGGGTTCAAGTGTCTGTGGGACACAAAT | + |
Preference number: 3 (lower is better) Translates to: AQEKVQSWSQGY*TDGFKCLWDTN Trigger: ATTTGTGTCCCACAGACACTTGAACCCATCAGTCCAGTAACCCTGTGACCAACTCTGTACCTTCTCCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | TGTCTCAGTGCCCAGCCTTGGCACCACTGGTCTGTTTGCAGCACCAAGCATAGCGGCTGGAAAATGATTTaGGATTCTATTCCAATAACC | + |
Preference number: 3 (lower is better) Translates to: CLSAQPWHHWSVCSTKHSGWKMI*DSIPIT Trigger: GGTTATTGGAATAGAATCCAAAATCATTTTCCAGCC...GCTATGCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | CAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGACAGTGCACCTCTGTTaGTATCCAGAGGGGTTAAAA | + |
Preference number: 3 (lower is better) Translates to: QECRIGFQGGLCSSLCSLTVHLC*YPEGLK Trigger: TTTTAACCCCTCTGGATACAAACAGAGGTGCACTGT...CAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR TCA 72 bp | GGAGAAGGTACAGAGTTGGTCACAGGGTTACTGGACTaGTGGGTTCAAGTGTCTGTGGGACACAAATGTGAT | + |
Preference number: 3 (lower is better) Translates to: GEGTELVTGLLD*WVQVSVGHKCD Trigger: ATCACATTTGTGTCCCACAGACACTTGAACCCATCAGTCCAGTAACCCTGTGACCAACTCTGTACCTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR TCA 72 bp | TCTCACCTTCCCTCTCAGGCCCTATCTACTTTGCTTTaGAGACAGGAGCTAGAACAGTGCACCTCTGTTTGT | + |
Preference number: 3 (lower is better) Translates to: SHLPSQALSTLL*RQELEQCTSVC Trigger: ACAAACAGAGGTGCACTGTTCTAGCTCCTGTCTTCAAAGCAAAGTAGATAGGGCCTGAGAGGGAAGGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR CCA 72 bp | TTAATGAGAATGTCAAGATCTCAGCTGAAAAGTCTCTaGATTCCCCCACCTGGAGCCAGCAGAGAGTCACTG | + |
Preference number: 3 (lower is better) Translates to: LMRMSRSQLKSL*IPPPGASRESL Trigger: CAGTGACTCTCTGCTGGCTCCAGGTGGGGGAATCCAGAGACTTTTCAGCTGAGATCTTGACATTCTCATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR CCA 72 bp | GGCGTAGGTCCGACGGGTGTCAGGGCTGAAGGATGCTaGATAAAACAACAGTGTGTGTCTTATTATAAAACG | + |
Preference number: 3 (lower is better) Translates to: GVGPTGVRAEGC*IKQQCVSYYKT Trigger: CGTTTTATAATAAGACACACACTGTTGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTCGGACCTACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | TCTTCAGTGTATGTAGATCTTGTCAGAGATGGCTCCAGGAAAATGGGTCATGATGTGATCAGGATAGCTTaGCCACTAGCCGCATCTGCC | + |
Preference number: 3 (lower is better) Translates to: SSVYVDLVRDGSRKMGHDVIRIA*PLAASA Trigger: GGCAGATGCGGCTAGTGGCAAAGCTATCCTGATCAC...ATCATGACCCATTTTCCTGGAGCCATCTCTGACAAGATCTACATACACTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR-3UTR CAA 90 bp | GCAGCCTTCAAATGCAAAAGTCCCTTGATTGAGAACACAGGCTCTCTAACTGTGACCCCAGCATCACCTTaGTCCTTCATCAAACAGCCA | + |
Preference number: 3 (lower is better) Translates to: AAFKCKSPLIENTGSLTVTPASP*SFIKQP Trigger: TGGCTGTTTGATGAAGGACAAAGGTGATGCTGGGGT...CACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCATTTGAAGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | CATCTTCACCCAGACCTAACTCGAATCTTTAATGAGAATGTCAAGATCTCAGCTTCCACCACACTGACCTaGACACCCAGAGGGTGCATC | + |
Preference number: 3 (lower is better) Translates to: HLHPDLTRIFNENVKISASTTLT*TPRGCI Trigger: GATGCACCCTCTGGGTGTCAAGGTCAGTGTGGTGGA...AGCTGAGATCTTGACATTCTCATTAAAGATTCGAGTTAGGTCTGGGTGAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR GCA 72 bp | ACTGGCGTAGGTCCGACGGGTGTCAGGGCTGAAGGATaGTGGATAAAACAACAGTGTGTGTCTTATTATAAA | + |
Preference number: 3 (lower is better) Translates to: TGVGPTGVRAEG*WIKQQCVSYYK Trigger: TTTATAATAAGACACACACTGTTGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTCGGACCTACGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR GCA 72 bp | ATCAAACAGCCAGCAAATACAAGGAAGCCTTTTGAGTaGAGATGCTTGGCCAGTGAGAACCCAAATCCAGAG | + |
Preference number: 3 (lower is better) Translates to: IKQPANTRKPFE*RCLASENPNPE Trigger: CTCTGGATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCTTGTATTTGCTGGCTGTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR-3UTR CAA 90 bp | CATCTTCACCCAGACCTAACTCGAATCTTTAATGAGAATGTCAAGATCTCAGCTTCACTGTTGCAGACATaGAGCTGGATGGTTCTCAGT | + |
Preference number: 3 (lower is better) Translates to: HLHPDLTRIFNENVKISASLLQT*SWMVLS Trigger: ACTGAGAACCATCCAGCTCAATGTCTGCAACAGTGA...AGCTGAGATCTTGACATTCTCATTAAAGATTCGAGTTAGGTCTGGGTGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
||
3UTR CCA 72 bp | GTTCTGTTTACTCATGAGACTTACATAAGGATCAAATaGGATACAGATTTCGAATGGATGTTTTGGCTGGAA | + |
Preference number: 3 (lower is better) Translates to: VLFTHETYIRIK*DTDFEWMFWLE Trigger: TTCCAGCCAAAACATCCATTCGAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 ENSMUST00000232433.2 |
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CDS-3UTR GCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGATGGCGATGGCCTGGATaGGCTCGGGGCTGTAGAGAC | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGWRWPG*ARGCRD Trigger: GTCTCTACAGCCCCGAGCGCATCCAGGCCATCGCCA...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACTTGGTGATGCAGTATaGCGAGCGGGCGGGGTTGGC | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGLGDAV*RAGGVG Trigger: GCCAACCCCGCCCGCTCGCCATACTGCATCACCAAG...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | CTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTCGCTGTGACAGGGGTCTaGAGAGACGGGCAGCTAGCA | + |
Preference number: 4 (lower is better) Translates to: LSPSHQVPWRRPKGPLQLAVTGV*RDGQLA Trigger: TGCTAGCTGCCCGTCTCTCCAGACCCCTGTCACAGC...GAGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 ENSMUST00000232433.2 |
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CDS-3UTR CCA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTCTTGGTGATGCAGTATaGCGAGCGGGCGGGGTTGGC | + |
Preference number: 4 (lower is better) Translates to: SFSLPPGSLAETEGTSSALGDAV*RAGGVG Trigger: GCCAACCCCGCCCGCTCGCCATACTGCATCACCAAG...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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3UTR CAA 72 bp | ACCGGCAGGCTGAATTCGCTCTCTGTGGGACCCTCTTaGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: TGRLNSLSVGPS*SQHCLHPPVAV Trigger: GACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGAGGGTCCCACAGAGAGCGAATTCAGCCTGCCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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CDS-3UTR GCA 90 bp | AGCACCATATTGGCCCTGAGGTTTAGGGCCACCCACCTGCGCCCTCCGCCCGCCCATCGAAGTACTTCCTaGCATAGTCCTTGCGGACGA | + |
Preference number: 4 (lower is better) Translates to: STILALRFRATHLRPPPAHRSTS*HSPCGR Trigger: TCGTCCGCAAGGACTATGGCAGGAAGTACTTCGATG...GGCGGGCGGAGGGCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTACATCTTCTTGGCGATaGCCTGGATGCGCTCGGGGC | + |
Preference number: 4 (lower is better) Translates to: SFSLPPGSLAETEGTSSATSSWR*PGCARG Trigger: GCCCCGAGCGCATCCAGGCCATCGCCAAGAAGATGT...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACATCCCACATCTTCTTaGCGATGGCCTGGATGCGCT | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGHPTSS*RWPGCA Trigger: AGCGCATCCAGGCCATCGCCAAGAAGATGTGGGATG...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | AGCACCATATTGGCCCTGAGGTTTAGGGCCACCCACCTGCGCCCTCCGCCCGCCACCAGTAGTAGTCCATaGGATGGTAGCGGGTATACG | + |
Preference number: 4 (lower is better) Translates to: STILALRFRATHLRPPPATSSSP*DGSGYT Trigger: CGTATACCCGCTACCATCCCATGGACTACTACTGGT...GGCGGGCGGAGGGCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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3UTR CAA 72 bp | CCAAACTTGGTGATGCAGTATGGCGAGCGGGCGGGGTaGGCCATGCGGCCCAGCATGCTGCTGATGTTAACG | + |
Preference number: 4 (lower is better) Translates to: PNLVMQYGERAG*AMRPSMLLMLT Trigger: CGTTAACATCAGCAGCATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCCATACTGCATCACCAAGTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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CDS-3UTR TCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAGACGGGTGTCAGGGCTaGAGGATGCTGGATAAAACA | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGDGCQG*RMLDKT Trigger: TGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTC...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR TCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACAGATGCTTGGCCAGTaGGAACCCAAATCCAGAGTC | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGQMLGQ*EPKSRV Trigger: GACTCTGGATTTGGGTTCTCACTGGCCAAGCATCTG...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | GCAAGTGTCTCAGTGCCCAGCCTTGGCACCACTGGTCTGTTTGCAGCACCAAGCACATCTTCTTGGCGATaGCCTGGATGCGCTCGGGGC | + |
Preference number: 4 (lower is better) Translates to: ASVSVPSLGTTGLFAAPSTSSWR*PGCARG Trigger: GCCCCGAGCGCATCCAGGCCATCGCCAAGAAGATGT...GCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACACTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | AGCACCATATTGGCCCTGAGGTTTAGGGCCACCCACCTGCGCCCTCCGCCCGCCATGGCTCCAGGAAAATaGGTCATGATCTGCATCCGA | + |
Preference number: 4 (lower is better) Translates to: STILALRFRATHLRPPPAMAPGK*VMICIR Trigger: TCGGATGCAGATCATGACCCATTTTCCTGGAGCCAT...GGCGGGCGGAGGGCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAAGGAAGCCTTTTGAGTaGAGATGCTTGGCCAGTGAG | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGRKPFE*RCLASE Trigger: CTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCT...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTCATCCCACATCTTCTTaGCGATGGCCTGGATGCGCT | + |
Preference number: 4 (lower is better) Translates to: SFSLPPGSLAETEGTSSAHPTSS*RWPGCA Trigger: AGCGCATCCAGGCCATCGCCAAGAAGATGTGGGATG...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAACCAGTAGTAGTCCATaGGATGGTAGCGGGTATACG | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGTSSSP*DGSGYT Trigger: CGTATACCCGCTACCATCCCATGGACTACTACTGGT...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | AGCACCATATTGGCCCTGAGGTTTAGGGCCACCCACCTGCGCCCTCCGCCCGCCAGATCTTGTCAGAGATaGCTCCAGGAAAATGGGTCA | + |
Preference number: 4 (lower is better) Translates to: STILALRFRATHLRPPPARSCQR*LQENGS Trigger: TGACCCATTTTCCTGGAGCCATCTCTGACAAGATCT...GGCGGGCGGAGGGCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR TCA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTCAGATGCTTGGCCAGTaGGAACCCAAATCCAGAGTC | + |
Preference number: 4 (lower is better) Translates to: SFSLPPGSLAETEGTSSAQMLGQ*EPKSRV Trigger: GACTCTGGATTTGGGTTCTCACTGGCCAAGCATCTG...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | CTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTCCATCGAAGTACTTCCTaGCATAGTCCTTGCGGACGA | + |
Preference number: 4 (lower is better) Translates to: LSPSHQVPWRRPKGPLQLHRSTS*HSPCGR Trigger: TCGTCCGCAAGGACTATGGCAGGAAGTACTTCGATG...GAGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
||
3UTR CAA 72 bp | TACGGGGTGGCGGCGGTCAAGGCGTGTGTGACAGCGTaGATGACAGAGGAAGTATCTGTGGAACCGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: YGVAAVKACVTA*MTEEVSVEPLL Trigger: CAACAGCGGTTCCACAGATACTTCCTCTGTCATCAACGCTGTCACACACGCCTTGACCGCCGCCACCCCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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CDS-3UTR CCA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAAGGGCTGAAGGATGCTaGATAAAACAACAGTGTGTG | + |
Preference number: 4 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGRAEGC*IKQQCV Trigger: CACACACTGTTGTTTTATCCAGCATCCTTCAGCCCT...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | GTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCGGCAGGCTGAATCTTGGTGATGCAGTATaGCGAGCGGGCGGGGTTGGC | + |
Preference number: 4 (lower is better) Translates to: VHLCLYPEGLKAQTGRLNLGDAV*RAGGVG Trigger: GCCAACCCCGCCCGCTCGCCATACTGCATCACCAAG...ATTCAGCCTGCCGGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | AAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGTGGTCAGCTGTGACAGGGGTCTaGAGAGACGGGCAGCTAGCA | + |
Preference number: 4 (lower is better) Translates to: KGVFALLFVPWQCPSRWSAVTGV*RDGQLA Trigger: TGCTAGCTGCCCGTCTCTCCAGACCCCTGTCACAGC...TGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR CAA 72 bp | CACATGAGCACACAAGACAACAGGCATCTAGACCCATaGCTGGGCAAGTGTCTCAGTGCCCAGCCTTGGCAC | + |
Preference number: 4 (lower is better) Translates to: HMSTQDNRHLDP*LGKCLSAQPWH Trigger: GTGCCAAGGCTGGGCACTGAGACACTTGCCCAGCAATGGGTCTAGATGCCTGTTGTCTTGTGTGCTCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
||
3UTR CAA 72 bp | GACCTTTGGCTCTTCGGAGAAGGGGAAGGAAGGATTTaGTGGTGCGCACGGTTCCCCAGAGGTTCACTTCAG | + |
Preference number: 4 (lower is better) Translates to: DLWLFGEGEGRI*WCARFPRGSLQ Trigger: CTGAAGTGAACCTCTGGGGAACCGTGCGCACCACAAAATCCTTCCTTCCCCTTCTCCGAAGAGCCAAAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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3UTR CAA 72 bp | CGGCCCAGCATGCTGCTGATGTTAACGACGCGACCTTaGGCTCTTCGGAGAAGGGGAAGGAAGGATTTTGTG | + |
Preference number: 4 (lower is better) Translates to: RPSMLLMLTTRP*ALRRRGRKDFV Trigger: CACAAAATCCTTCCTTCCCCTTCTCCGAAGAGCCAAAGGTCGCGTCGTTAACATCAGCAGCATGCTGGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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CDS-3UTR CCA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTAGGGCTGAAGGATGCTaGATAAAACAACAGTGTGTG | + |
Preference number: 4 (lower is better) Translates to: SFSLPPGSLAETEGTSSARAEGC*IKQQCV Trigger: CACACACTGTTGTTTTATCCAGCATCCTTCAGCCCT...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | GGAGCTAGAACAGTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCTCCTGCCATAGTCCTTaGGGACGACCTCAGGCAGGT | + |
Preference number: 4 (lower is better) Translates to: GARTVHLCLYPEGLKAQTSCHSP*GRPQAG Trigger: ACCTGCCTGAGGTCGTCCGCAAGGACTATGGCAGGA...GGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCACTGTTCTAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTTTGAGTGCAGATGCTTaGCCAGTGAGAACCCAAATC | + |
Preference number: 4 (lower is better) Translates to: SLSQHCLHPPVAVQVPLLLSADA*PVRTQI Trigger: GATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAA...AAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | ACCCTCTTTGTCTCAGCACTGCCTGCACCCGCCTGTGGCTGTCCAGGTTCCTTTAGATCTTGTCAGAGATaGCTCCAGGAAAATGGGTCA | + |
Preference number: 4 (lower is better) Translates to: TLFVSALPAPACGCPGSFRSCQR*LQENGS Trigger: TGACCCATTTTCCTGGAGCCATCTCTGACAAGATCT...AAAGGAACCTGGACAGCCACAGGCGGGTGCAGGCAGTGCTGAGACAAAGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR TCA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCACGATCCCAAACTTGGTaGTGCAGTATGGCGAGCGGG | + |
Preference number: 4 (lower is better) Translates to: STANQKVNSLPSSFSLPPRSQTW*CSMASG Trigger: CCCGCTCGCCATACTGCATCACCAAGTTTGGGATCG...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCATCCTGCCATAGTCCTTaGGGACGACCTCAGGCAGGT | + |
Preference number: 4 (lower is better) Translates to: STANQKVNSLPSSFSLPPSCHSP*GRPQAG Trigger: ACCTGCCTGAGGTCGTCCGCAAGGACTATGGCAGGA...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | ACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCATCCCACATCTTCTTaGCGATGGCCTGGATGCGCT | + |
Preference number: 4 (lower is better) Translates to: TARSVGSVSKGVFALLFVHPTSS*RWPGCA Trigger: AGCGCATCCAGGCCATCGCCAAGAAGATGTGGGATG...AACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | AAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGTGGTCAAGGAAGCCTTTTGAGTaGAGATGCTTGGCCAGTGAG | + |
Preference number: 4 (lower is better) Translates to: KGVFALLFVPWQCPSRWSRKPFE*RCLASE Trigger: CTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCT...TGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
||
CDS-3UTR CCA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTAGTAGGTTTCCATCTTaGCAATCTTTTCATCGAAGT | + |
Preference number: 4 (lower is better) Translates to: SFSLPPGSLAETEGTSSASRFPS*QSFHRS Trigger: ACTTCGATGAAAAGATTGCCAAGATGGAAACCTACT...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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3UTR CAA 72 bp | GCTTTGAAGACAGGAGCTAGAACAGTGCACCTCTGTTaGTATCCAGAGGGGTTAAAAGCCCAAACCGGCAGG | + |
Preference number: 4 (lower is better) Translates to: ALKTGARTVHLC*YPEGLKAQTGR Trigger: CCTGCCGGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCACTGTTCTAGCTCCTGTCTTCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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3UTR CAA 72 bp | CCAGCAAATACAAGGAAGCCTTTTGAGTGCAGATGCTaGGCCAGTGAGAACCCAAATCCAGAGTCACAGCCT | + |
Preference number: 4 (lower is better) Translates to: PANTRKPFECRC*ASENPNPESQP Trigger: AGGCTGTGACTCTGGATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCTTGTATTTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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CDS-3UTR CCA 90 bp | ACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTTTGCAGACATTGAGCTaGATGGTTCTCAGTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: TARSVGSVSKGVFALLFVLQTLS*MVLSRS Trigger: TGACCGACTGAGAACCATCCAGCTCAATGTCTGCAA...AACAAAGAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCCTCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCATTGAGTGCAGATGCTTaGCCAGTGAGAACCCAAATC | + |
Preference number: 4 (lower is better) Translates to: SSTANQKVNSLPSSFSLPLSADA*PVRTQI Trigger: GATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAA...TGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCATTGCAGACATTGAGCTaGATGGTTCTCAGTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: STANQKVNSLPSSFSLPPLQTLS*MVLSRS Trigger: TGACCGACTGAGAACCATCCAGCTCAATGTCTGCAA...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCCTCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCATTGCAGACATTGAGCTaGATGGTTCTCAGTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: SSTANQKVNSLPSSFSLPLQTLS*MVLSRS Trigger: TGACCGACTGAGAACCATCCAGCTCAATGTCTGCAA...TGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCCTCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCAATGGCTCCAGGAAAATaGGTCATGATCTGCATCCGA | + |
Preference number: 4 (lower is better) Translates to: SSTANQKVNSLPSSFSLPMAPGK*VMICIR Trigger: TCGGATGCAGATCATGACCCATTTTCCTGGAGCCAT...TGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCTGGCGATGGCCTGGATaGGCTCGGGGCTGTAGAGAC | + |
Preference number: 4 (lower is better) Translates to: SVLFTHETYIRIKWDTDFWRWPG*ARGCRD Trigger: GTCTCTACAGCCCCGAGCGCATCCAGGCCATCGCCA...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | AAGGTTAAAATAGGTCTTCCTAAGACAGTGGGTAATCCTCAACAGCTAATCAAAGCTGTGACAGGGGTCTaGAGAGACGGGCAGCTAGCA | + |
Preference number: 4 (lower is better) Translates to: KVKIGLPKTVGNPQQLIKAVTGV*RDGQLA Trigger: TGCTAGCTGCCCGTCTCTCCAGACCCCTGTCACAGC...TTTGATTAGCTGTTGAGGATTACCCACTGTCTTAGGAAGACCTATTTTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 ENSMUST00000232433.2 |
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CDS-3UTR CCA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCAAGATCTTGTCAGAGATaGCTCCAGGAAAATGGGTCA | + |
Preference number: 4 (lower is better) Translates to: STANQKVNSLPSSFSLPPRSCQR*LQENGS Trigger: TGACCCATTTTCCTGGAGCCATCTCTGACAAGATCT...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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3UTR CAA 72 bp | CTTCAGGGACAAGCAGCCTTCAAATGCAAAAGTCCCTaGATTGAGAACACAGGCTCTCTAACTGTGTCTCAG | + |
Preference number: 4 (lower is better) Translates to: LQGQAAFKCKSP*IENTGSLTVSQ Trigger: CTGAGACACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCATTTGAAGGCTGCTTGTCCCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115227.10 ENSMUST00000232433.2 |
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CDS-3UTR GCA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCTCCTGCCATAGTCCTTaGGGACGACCTCAGGCAGGT | + |
Preference number: 4 (lower is better) Translates to: SVLFTHETYIRIKWDTDFSCHSP*GRPQAG Trigger: ACCTGCCTGAGGTCGTCCGCAAGGACTATGGCAGGA...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | AAGGTTAAAATAGGTCTTCCTAAGACAGTGGGTAATCCTCAACAGCTAATCAAACATCGAAGTACTTCCTaGCATAGTCCTTGCGGACGA | + |
Preference number: 4 (lower is better) Translates to: KVKIGLPKTVGNPQQLIKHRSTS*HSPCGR Trigger: TCGTCCGCAAGGACTATGGCAGGAAGTACTTCGATG...TTTGATTAGCTGTTGAGGATTACCCACTGTCTTAGGAAGACCTATTTTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | GCAGCCTTCAAATGCAAAAGTCCCTTGATTGAGAACACAGGCTCTCTAACTGTGAGTAGGTTTCCATCTTaGCAATCTTTTCATCGAAGT | + |
Preference number: 4 (lower is better) Translates to: AAFKCKSPLIENTGSLTVSRFPS*QSFHRS Trigger: ACTTCGATGAAAAGATTGCCAAGATGGAAACCTACT...CACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCATTTGAAGGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR GCA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCAGGAAGCCTTTTGAGTaGAGATGCTTGGCCAGTGAG | + |
Preference number: 4 (lower is better) Translates to: SVLFTHETYIRIKWDTDFRKPFE*RCLASE Trigger: CTCACTGGCCAAGCATCTGCACTCAAAAGGCTTCCT...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCTTGAGTGCAGATGCTTaGCCAGTGAGAACCCAAATC | + |
Preference number: 4 (lower is better) Translates to: SVLFTHETYIRIKWDTDFLSADA*PVRTQI Trigger: GATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAA...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CCA 90 bp | AAGGTTAAAATAGGTCTTCCTAAGACAGTGGGTAATCCTCAACAGCTAATCAAAAGTAGGTTTCCATCTTaGCAATCTTTTCATCGAAGT | + |
Preference number: 4 (lower is better) Translates to: KVKIGLPKTVGNPQQLIKSRFPS*QSFHRS Trigger: ACTTCGATGAAAAGATTGCCAAGATGGAAACCTACT...TTTGATTAGCTGTTGAGGATTACCCACTGTCTTAGGAAGACCTATTTTAACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAGGCGAGCGGGCGGGGTaGGCCATGCGGCCCAGCATG | + |
Preference number: 5 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGGERAG*AMRPSM Trigger: CATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCC...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTGGCGAGCGGGCGGGGTaGGCCATGCGGCCCAGCATG | + |
Preference number: 5 (lower is better) Translates to: SFSLPPGSLAETEGTSSAGERAG*AMRPSM Trigger: CATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCC...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | GTTTCCAAGGGGGTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGGGCGAGCGGGCGGGGTaGGCCATGCGGCCCAGCATG | + |
Preference number: 5 (lower is better) Translates to: VSKGVFALLFVPWQCPSRGERAG*AMRPSM Trigger: CATGCTGGGCCGCATGGCCAACCCCGCCCGCTCGCC...CCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGACCCCCTTGGAAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGATCATCCCACATCTTCTaGGCGATGGCCTGGATGCGC | + |
Preference number: 5 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGSSHIF*AMAWMR Trigger: GCGCATCCAGGCCATCGCCAAGAAGATGTGGGATGA...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTCGTGGCCGCTATGAAGTaGCCAGGTTCCACCACACTG | + |
Preference number: 5 (lower is better) Translates to: LSPSHQVPWRRPKGPLQLVAAMK*PGSTTL Trigger: CAGTGTGGTGGAACCTGGCAACTTCATAGCGGCCAC...GAGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS CCA 90 bp | CTGGGAGCTGTGACAGGGGTCTGGAGAGACGGGCAGCTAGCATCGTaGCACCAAGTTGTAAGACGCTCTGCTTCCTTCTGGTGGCTCTGG | + |
Preference number: 5 (lower is better) Translates to: LGAVTGVWRDGQLAS*HQVVRRSASFWWLW Trigger: CCAGAGCCACCAGAAGGAAGCAGAGCGTCTTACAACTTGGTGCCACGATGCTAGCTGCCCGTCTCTCCAGACCCCTGTCACAGCTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149039.2 |
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CDS-3UTR CAA 90 bp | AGCACCATATTGGCCCTGAGGTTTAGGGCCACCCACCTGCGCCCTCCGCCCGCCTCACTGTTGCAGACATaGAGCTGGATGGTTCTCAGT | + |
Preference number: 5 (lower is better) Translates to: STILALRFRATHLRPPPASLLQT*SWMVLS Trigger: ACTGAGAACCATCCAGCTCAATGTCTGCAACAGTGA...GGCGGGCGGAGGGCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | ATTCCCCCACCTGGAGCCAGCAGAGAGTCACTGACTGCTGGCCACCAGTCACACTCCACCACACTGACCTaGACACCCAGAGGGTGCATC | + |
Preference number: 5 (lower is better) Translates to: IPPPGASRESLTAGHQSHSTTLT*TPRGCI Trigger: GATGCACCCTCTGGGTGTCAAGGTCAGTGTGGTGGA...GTGTGACTGGTGGCCAGCAGTCAGTGACTCTCTGCTGGCTCCAGGTGGGGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAACCCCAGCATCACCTTaGTCCTTCATCAAACAGCCA | + |
Preference number: 5 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGTPASP*SFIKQP Trigger: TGGCTGTTTGATGAAGGACAAAGGTGATGCTGGGGT...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS CCA 90 bp | TGTCACGGACACTTAGGGCTTTTCCTGGGAGCTGTGACAGGGGTCTaGAGAGACGGGCAGCTAGCATCGTGGCACCAAGTTGTAAGACGC | + |
Preference number: 5 (lower is better) Translates to: CHGHLGLFLGAVTGV*RDGQLASWHQVVRR Trigger: GCGTCTTACAACTTGGTGCCACGATGCTAGCTGCCCGTCTCTCCAGACCCCTGTCACAGCTCCCAGGAAAAGCCCTAAGTGTCCGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149039.2 |
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CDS-3UTR CAA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAATACAAGGAAGCCTTTaGAGTGCAGATGCTTGGCCA | + |
Preference number: 5 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGIQGSL*SADAWP Trigger: TGGCCAAGCATCTGCACTCAAAAGGCTTCCTTGTAT...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TGCACCCGCCTGTGGCTGTCCAGGTTCCTTTGCTTTCTCCTGGCGCTGGGCTTCACCCCAGCATCACCTTaGTCCTTCATCAAACAGCCA | + |
Preference number: 5 (lower is better) Translates to: CTRLWLSRFLCFLLALGFTPASP*SFIKQP Trigger: TGGCTGTTTGATGAAGGACAAAGGTGATGCTGGGGT...GAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGGCGGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGATCACTGTTGCAGACATaGAGCTGGATGGTTCTCAGT | + |
Preference number: 5 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGSLLQT*SWMVLS Trigger: ACTGAGAACCATCCAGCTCAATGTCTGCAACAGTGA...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CCCTCCCCTCATCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGAACAACAGTGTGTGTCTaGTCCCATTTTCTCTGTCAC | + |
Preference number: 5 (lower is better) Translates to: PSPHLSPSHQVPWRRPKGTTVCV*SHFLCH Trigger: GTGACAGAGAAAATGGGACAAGACACACACTGTTGT...TCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGATGAGGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCTTTCTCCCTCCCACCAGGTTCCCTGGCGGAGACCGAAGGGACCTCTTCAGCTGCGTGTGTGACAGCGTaGATGACAGAGGAAGTATCT | + |
Preference number: 5 (lower is better) Translates to: SFSLPPGSLAETEGTSSAACVTA*MTEEVS Trigger: AGATACTTCCTCTGTCATCAACGCTGTCACACACGC...AGCTGAAGAGGTCCCTTCGGTCTCCGCCAGGGAACCTGGTGGGAGGGAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS GCA 90 bp | GAGAGACGGGCAGCTAGCATCGTGGCACCAAGTTGTAAGACGCTCTaGTTCCTTCTGGTGGCTCTGGTACACAGACTTCTAAAGCCACCA | + |
Preference number: 5 (lower is better) Translates to: ERRAASIVAPSCKTL*FLLVALVHRLLKPP Trigger: TGGTGGCTTTAGAAGTCTGTGTACCAGAGCCACCAGAAGGAAGCAGAGCGTCTTACAACTTGGTGCCACGATGCTAGCTGCCCGTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149039.2 |
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CDS-3UTR CAA 90 bp | GTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCGGCAGGCTGAATGTGGCCGCTATGAAGTaGCCAGGTTCCACCACACTG | + |
Preference number: 5 (lower is better) Translates to: VHLCLYPEGLKAQTGRLNVAAMK*PGSTTL Trigger: CAGTGTGGTGGAACCTGGCAACTTCATAGCGGCCAC...ATTCAGCCTGCCGGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TGTCTCAGTGCCCAGCCTTGGCACCACTGGTCTGTTTGCAGCACCAAGCATAGCTCACTGTTGCAGACATaGAGCTGGATGGTTCTCAGT | + |
Preference number: 5 (lower is better) Translates to: CLSAQPWHHWSVCSTKHSSLLQT*SWMVLS Trigger: ACTGAGAACCATCCAGCTCAATGTCTGCAACAGTGA...GCTATGCTTGGTGCTGCAAACAGACCAGTGGTGCCAAGGCTGGGCACTGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCATCCACCACACTGACCTaGACACCCAGAGGGTGCATC | + |
Preference number: 5 (lower is better) Translates to: STANQKVNSLPSSFSLPPSTTLT*TPRGCI Trigger: GATGCACCCTCTGGGTGTCAAGGTCAGTGTGGTGGA...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCCTCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCATCATCCCACATCTTCTaGGCGATGGCCTGGATGCGC | + |
Preference number: 5 (lower is better) Translates to: SSTANQKVNSLPSSFSLPSSHIF*AMAWMR Trigger: GCGCATCCAGGCCATCGCCAAGAAGATGTGGGATGA...TGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CTAGACACTGCCAGGAGTGTAGGATCGGTTTCCAAGGGGGTCTTTGCTCTTCTCGCGTGTGTGACAGCGTaGATGACAGAGGAAGTATCT | + |
Preference number: 5 (lower is better) Translates to: LDTARSVGSVSKGVFALLACVTA*MTEEVS Trigger: AGATACTTCCTCTGTCATCAACGCTGTCACACACGC...GAGAAGAGCAAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCCTCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCAGTGATCAGGATAGCTTaGCCACTAGCCGCATCTGCC | + |
Preference number: 5 (lower is better) Translates to: SSTANQKVNSLPSSFSLPVIRIA*PLAASA Trigger: GGCAGATGCGGCTAGTGGCAAAGCTATCCTGATCAC...TGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCAACCCCAGCATCACCTTaGTCCTTCATCAAACAGCCA | + |
Preference number: 5 (lower is better) Translates to: STANQKVNSLPSSFSLPPTPASP*SFIKQP Trigger: TGGCTGTTTGATGAAGGACAAAGGTGATGCTGGGGT...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | GGAGCTAGAACAGTGCACCTCTGTTTGTATCCAGAGGGGTTAAAAGCCCAAACCCTAGGTTCAATCCCCTaGTCCCATTTTCTCTGTCAC | + |
Preference number: 5 (lower is better) Translates to: GARTVHLCLYPEGLKAQTLGSIP*SHFLCH Trigger: GTGACAGAGAAAATGGGACAAGGGGATTGAACCTAG...GGTTTGGGCTTTTAACCCCTCTGGATACAAACAGAGGTGCACTGTTCTAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000232433.2 |
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CDS-3UTR CAA 90 bp | TCCTCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCATTTGAGTGCAGATGCTaGGCCAGTGAGAACCCAAAT | + |
Preference number: 5 (lower is better) Translates to: SSTANQKVNSLPSSFSLPFECRC*ASENPN Trigger: ATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAA...TGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | GTCTTTGCTCTTCTCTTTGTTCCCTGGCAGTGTCCAAGTAGGTGGTCAAACACTATACAAGGAAGCCTTTaGAGTGCAGATGCTTGGCCA | + |
Preference number: 5 (lower is better) Translates to: VFALLFVPWQCPSRWSNTIQGSL*SADAWP Trigger: TGGCCAAGCATCTGCACTCAAAAGGCTTCCTTGTAT...AGTGTTTGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGCAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCAACAGCTAATCAAAAGGTAAACTCCCTCCCCTCATCTTTCTCCCTCCCACCAACAACAGTGTGTGTCTaGTCCCATTTTCTCTGTCAC | + |
Preference number: 5 (lower is better) Translates to: STANQKVNSLPSSFSLPPTTVCV*SHFLCH Trigger: GTGACAGAGAAAATGGGACAAGACACACACTGTTGT...TGGTGGGAGGGAGAAAGATGAGGGGAGGGAGTTTACCTTTTGATTAGCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | AAGGTTAAAATAGGTCTTCCTAAGACAGTGGGTAATCCTCAACAGCTAATCAAAGTGATCAGGATAGCTTaGCCACTAGCCGCATCTGCC | + |
Preference number: 5 (lower is better) Translates to: KVKIGLPKTVGNPQQLIKVIRIA*PLAASA Trigger: GGCAGATGCGGCTAGTGGCAAAGCTATCCTGATCAC...TTTGATTAGCTGTTGAGGATTACCCACTGTCTTAGGAAGACCTATTTTAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCGTGGCCGCTATGAAGTaGCCAGGTTCCACCACACTG | + |
Preference number: 5 (lower is better) Translates to: SVLFTHETYIRIKWDTDFVAAMK*PGSTTL Trigger: CAGTGTGGTGGAACCTGGCAACTTCATAGCGGCCAC...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | TCTGTTCTGTTTACTCATGAGACTTACATAAGGATCAAATGGGATACAGATTTCTCATCCCACATCTTCTaGGCGATGGCCTGGATGCGC | + |
Preference number: 5 (lower is better) Translates to: SVLFTHETYIRIKWDTDFSSHIF*AMAWMR Trigger: GCGCATCCAGGCCATCGCCAAGAAGATGTGGGATGA...GAAATCTGTATCCCATTTGATCCTTATGTAAGTCTCATGAGTAAACAGAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CATCTTCACCCAGACCTAACTCGAATCTTTAATGAGAATGTCAAGATCTCAGCTTTTGAGTGCAGATGCTaGGCCAGTGAGAACCCAAAT | + |
Preference number: 5 (lower is better) Translates to: HLHPDLTRIFNENVKISAFECRC*ASENPN Trigger: ATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAA...AGCTGAGATCTTGACATTCTCATTAAAGATTCGAGTTAGGTCTGGGTGAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | CAGCATCTTCACCCAGACCTAACTCGAATCTTTAATGAGAATGTCAAGATCTCAACAACAGTGTGTGTCTaGTCCCATTTTCTCTGTCAC | + |
Preference number: 5 (lower is better) Translates to: QHLHPDLTRIFNENVKISTTVCV*SHFLCH Trigger: GTGACAGAGAAAATGGGACAAGACACACACTGTTGT...TGAGATCTTGACATTCTCATTAAAGATTCGAGTTAGGTCTGGGTGAAGATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | AAGGTTAAAATAGGTCTTCCTAAGACAGTGGGTAATCCTCAACAGCTAATCAAAGCGTGTGTGACAGCGTaGATGACAGAGGAAGTATCT | + |
Preference number: 5 (lower is better) Translates to: KVKIGLPKTVGNPQQLIKACVTA*MTEEVS Trigger: AGATACTTCCTCTGTCATCAACGCTGTCACACACGC...TTTGATTAGCTGTTGAGGATTACCCACTGTCTTAGGAAGACCTATTTTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS-3UTR CAA 90 bp | AAGGTTAAAATAGGTCTTCCTAAGACAGTGGGTAATCCTCAACAGCTAATCAAATTTGAGTGCAGATGCTaGGCCAGTGAGAACCCAAAT | + |
Preference number: 5 (lower is better) Translates to: KVKIGLPKTVGNPQQLIKFECRC*ASENPN Trigger: ATTTGGGTTCTCACTGGCCAAGCATCTGCACTCAAA...TTTGATTAGCTGTTGAGGATTACCCACTGTCTTAGGAAGACCTATTTTAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089759.9 ENSMUST00000115227.10 |
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CDS CCA 72 bp | GTGACAGGGGTCTGGAGAGACGGGCAGCTAGCATCGTaGCACCAAGTTGTAAGACGCTCTGCTTCCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: VTGVWRDGQLAS*HQVVRRSASFW Trigger: CCAGAAGGAAGCAGAGCGTCTTACAACTTGGTGCCACGATGCTAGCTGCCCGTCTCTCCAGACCCCTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149039.2 |
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CDS CCA 72 bp | CACTTAGGGCTTTTCCTGGGAGCTGTGACAGGGGTCTaGAGAGACGGGCAGCTAGCATCGTGGCACCAAGTT | + |
Preference number: 6 (lower is better) Translates to: HLGLFLGAVTGV*RDGQLASWHQV Trigger: AACTTGGTGCCACGATGCTAGCTGCCCGTCTCTCCAGACCCCTGTCACAGCTCCCAGGAAAAGCCCTAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149039.2 |
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CDS TCA 72 bp | CTGCCTGACTGGCGTAGGTCCGACGGGTGTCAGGGCTaGAGGATGCTGGATAAAACAACAGTGTGTGTCTTG | + |
Preference number: 6 (lower is better) Translates to: LPDWRRSDGCQG*RMLDKTTVCVL Trigger: CAAGACACACACTGTTGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTCGGACCTACGCCAGTCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 ENSMUST00000149039.2 |
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CDS GCA 72 bp | ACTGGCGTAGGTCCGACGGGTGTCAGGGCTGAAGGATaGTGGATAAAACAACAGTGTGTGTCTTGTCCCATT | + |
Preference number: 6 (lower is better) Translates to: TGVGPTGVRAEG*WIKQQCVSCPI Trigger: AATGGGACAAGACACACACTGTTGTTTTATCCAGCATCCTTCAGCCCTGACACCCGTCGGACCTACGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089759.9 ENSMUST00000115226.8 ENSMUST00000115227.10 ENSMUST00000149039.2 |
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CDS GCA 72 bp | GCAGCTAGCATCGTGGCACCAAGTTGTAAGACGCTCTaGTTCCTTCTGGTGGCTCTGGTACACAGACTTCTA | + |
Preference number: 6 (lower is better) Translates to: AASIVAPSCKTL*FLLVALVHRLL Trigger: TAGAAGTCTGTGTACCAGAGCCACCAGAAGGAAGCAGAGCGTCTTACAACTTGGTGCCACGATGCTAGCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149039.2 |