RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000009681

Ensembl transcript IDs: ENSMUST00000164107.3, ENSMUST00000218465.2, ENSMUST00000218591.2

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATCAGTGGGCTCGGCCACTCTCCCTGCAGAAGGAATTGTAAGGTaGGTGACGACCAGGGTCTCCTTCCCCGTGCTGGGTCCTGGGACA +
Preference number: 1 (lower is better)
Translates to: GSVGSATLPAEGIVR*VTTRVSFPVLGPGT
Trigger: TGTCCCAGGACCCAGCACGGGGAAGGAGACCCTGGTCGTCACGCACCTTACAATTCCTTCTGCAGGGAGAGTGGCCGAGCCCACTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp TGTAAGGTGCGTGACGACCAGGGTCTCCTTCCCCGTGCTGGGTCCTaGGACACTTCTGGGCTGTGGAGGAGCACACTCCTGAGAGGTGCA +
Preference number: 1 (lower is better)
Translates to: CKVRDDQGLLPRAGS*DTSGLWRSTLLRGA
Trigger: TGCACCTCTCAGGAGTGTGCTCCTCCACAGCCCAGAAGTGTCCCAGGACCCAGCACGGGGAAGGAGACCCTGGTCGTCACGCACCTTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp GCCGAGTTCAAAAGCAGGATCGCAGCTAAGAGACCATCCACCCACTaGAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCC +
Preference number: 1 (lower is better)
Translates to: AEFKSRIAAKRPSTH*RGQATTRKAKPTVP
Trigger: GGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGTGGATGGTCTCTTAGCTGCGATCCTGCTTTTGAACTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 90 bp CTCTTCTCCGCCTCTTTTCCCTTGTCCGCAGGCTTGCAGATGGGCTaGCTTGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCT +
Preference number: 1 (lower is better)
Translates to: LFSASFPLSAGLQMG*LGVPSGGNKGKVQS
Trigger: AGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGAAAAGAGGCGGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR GCA 90 bp GTCCTGGGACACTTCTGGGCTGTGGAGGAGCACACTCCTGAGAGGTaGATAGAGAGCCCAGACAAGAGTATCAGAGAACAGGAGCCTGAC +
Preference number: 1 (lower is better)
Translates to: VLGHFWAVEEHTPER*IESPDKSIREQEPD
Trigger: GTCAGGCTCCTGTTCTCTGATACTCTTGTCTGGGCTCTCTATGCACCTCTCAGGAGTGTGCTCCTCCACAGCCCAGAAGTGTCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp AACTGCTGTCTTGGAGCAGAGATGGCTGAGAAAGGTAACCGAGTCTaGTCAGACGGGAGCAAGGGAAGGGAGTGGTCTCTTAGATGGGGC +
Preference number: 1 (lower is better)
Translates to: NCCLGAEMAEKGNRV*SDGSKGREWSLRWG
Trigger: GCCCCATCTAAGAGACCACTCCCTTCCCTTGCTCCCGTCTGAGCAGACTCGGTTACCTTTCTCAGCCATCTCTGCTCCAAGACAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp GTGCAGGAGTCCTCACGGGACAGGCAGTCTACACCCCTAAAATTATaGCTTCCTGCAGGAGCAGCTCAGGATTCAAGTCTCTCGTCAGCC +
Preference number: 1 (lower is better)
Translates to: VQESSRDRQSTPLKL*LPAGAAQDSSLSSA
Trigger: GGCTGACGAGAGACTTGAATCCTGAGCTGCTCCTGCAGGAAGGCATAATTTTAGGGGTGTAGACTGCCTGTCCCGTGAGGACTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp GATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTACTTGTCTCTTaGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGG +
Preference number: 1 (lower is better)
Translates to: DSRRPLGLSLWVLVS*QMAQSFGMAKLHRR
Trigger: CCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CCA 90 bp AAGAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTaGGCGGTCATAACGGACTGGGGCCGTCATTCTCTTTGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: KKVSLLPLASGSHAW*AVITDWGRHSLCRG
Trigger: CCCTCTGCAAAGAGAATGACGGCCCCAGTCCGTTATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp GCTGTCCAGATAAGCATGATGCTGCCAAGGCTGGTCCTGAGCTCATaGCAACTCTGCCTCTGTCACCCAAGGGTGGGATTCTACCCTTTA +
Preference number: 1 (lower is better)
Translates to: AVQISMMLPRLVLSS*QLCLCHPRVGFYPL
Trigger: TAAAGGGTAGAATCCCACCCTTGGGTGACAGAGGCAGAGTTGCCATGAGCTCAGGACCAGCCTTGGCAGCATCATGCTTATCTGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp AGCTTTTCTCAGCAGTGCTCCCCTTACAGGGTCAGAGCCATGACATaGACTGGGATGAACAGCCAAACTAGAGGAGCCCAGTGGGTCCAA +
Preference number: 1 (lower is better)
Translates to: SFSQQCSPYRVRAMT*TGMNSQTRGAQWVQ
Trigger: TTGGACCCACTGGGCTCCTCTAGTTTGGCTGTTCATCCCAGTCCATGTCATGGCTCTGACCCTGTAAGGGGAGCACTGCTGAGAAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp GGTAAGAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTaGTGGGCGGTCATAACGGACTGGGGCCGTCATTCTCTTTGCAGA +
Preference number: 1 (lower is better)
Translates to: GKKVSLLPLASGSHA*WAVITDWGRHSLCR
Trigger: TCTGCAAAGAGAATGACGGCCCCAGTCCGTTATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp GCCATGACATGGACTGGGATGAACAGCCAAACTAGAGGAGCCCAGTaGGTCCAAAAATGCTCAAGAGCAGACCAATGGGTAGCTCTGCTG +
Preference number: 1 (lower is better)
Translates to: AMTWTGMNSQTRGAQ*VQKCSRADQWVALL
Trigger: CAGCAGAGCTACCCATTGGTCTGCTCTTGAGCATTTTTGGACCCACTGGGCTCCTCTAGTTTGGCTGTTCATCCCAGTCCATGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 90 bp CCCAGGCCTGACTTTCCTAGCCTTCTTCCCATATTTCTGATGCTCTaGAGGGAGGCATCAGAAACGACTCCAAACAAAAGGAAGCCGGCT +
Preference number: 1 (lower is better)
Translates to: PRPDFPSLLPIFLML*REASETTPNKRKPA
Trigger: AGCCGGCTTCCTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGAAGAAGGCTAGGAAAGTCAGGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 90 bp GTGAACCGAGGCAGGGGGTGGGCCAGGGAATGCACATTGGCACATTaGTATATTGCTTTCCAGTTCAAGGTGACAGACACAAAGCAAACA +
Preference number: 1 (lower is better)
Translates to: VNRGRGWARECTLAH*YIAFQFKVTDTKQT
Trigger: TGTTTGCTTTGTGTCTGTCACCTTGAACTGGAAAGCAATATATCAATGTGCCAATGTGCATTCCCTGGCCCACCCCCTGCCTCGGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp ATAAGCATGATGCTGCCAAGGCTGGTCCTGAGCTCATGGCAACTCTaGCTCTGTCACCCAAGGGTGGGATTCTACCCTTTAAGAAATGAT +
Preference number: 1 (lower is better)
Translates to: ISMMLPRLVLSSWQL*LCHPRVGFYPLRND
Trigger: ATCATTTCTTAAAGGGTAGAATCCCACCCTTGGGTGACAGAGGCAGAGTTGCCATGAGCTCAGGACCAGCCTTGGCAGCATCATGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp AGGCAGGGGGTGGGCCAGGGAATGCACATTGGCACATTGATATATTaGTTTCCAGTTCAAGGTGACAGACACAAAGCAAACAATGGGTTG +
Preference number: 1 (lower is better)
Translates to: RQGVGQGMHIGTLIY*FPVQGDRHKANNGL
Trigger: CAACCCATTGTTTGCTTTGTGTCTGTCACCTTGAACTGGAAAGCAATATATCAATGTGCCAATGTGCATTCCCTGGCCCACCCCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp ATGACCTATAGAAGCTTGGAAAGGACCAAGGTGCTGTGTACGAACTaGACGAGGGCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGT +
Preference number: 1 (lower is better)
Translates to: MTYRSLERTKVLCTN*TRAHSLLAGDSLNS
Trigger: ACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGCCCTCGTGCAGTTCGTACACAGCACCTTGGTCCTTTCCAAGCTTCTATAGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
3UTR TCA 90 bp ACTCTGCCTCTGTCACCCAAGGGTGGGATTCTACCCTTTAAGAAATaGTGCAAGGGTTTATGGGATTCCTTCTTGAAGACAATCAGTGGT +
Preference number: 1 (lower is better)
Translates to: TLPLSPKGGILPFKK*CKGLWDSFLKTISG
Trigger: ACCACTGATTGTCTTCAAGAAGGAATCCCATAAACCCTTGCATCATTTCTTAAAGGGTAGAATCCCACCCTTGGGTGACAGAGGCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 90 bp AAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTaGTGTCTTGGAGCAGAGATGGCTGAGAAAGGTAACCGAGTCTGC +
Preference number: 1 (lower is better)
Translates to: KLFRIKVLKQATRGN*CLGAEMAEKGNRVC
Trigger: GCAGACTCGGTTACCTTTCTCAGCCATCTCTGCTCCAAGACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 90 bp TTCTACCCTTTAAGAAATGATGCAAGGGTTTATGGGATTCCTTCTTaGAGACAATCAGTGGTTTTCCCTTTCCCTTTGCTAACTAGGGTG +
Preference number: 1 (lower is better)
Translates to: FYPLRNDARVYGIPS*RQSVVFPFPLLTRV
Trigger: CACCCTAGTTAGCAAAGGGAAAGGGAAAACCACTGATTGTCTTCAAGAAGGAATCCCATAAACCCTTGCATCATTTCTTAAAGGGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR TCA 90 bp GGGAACGTGAAGGCATCCCCACCTAAACAGAGGGACATGGCTGTGGCCCCCACAGGCTTGCAGATGGGCTaGCTTGGGGTGCCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: GNVKASPPKQRDMAVAPTGLQMG*LGVPSG
Trigger: ACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCC...TGTGGGGGCCACAGCCATGTCCCTCTGTTTAGGTGGGGATGCCTTCACGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR CCA 90 bp GGGAACGTGAAGGCATCCCCACCTAAACAGAGGGACATGGCTGTGGCCCCCACAGGGAAAGGTACAGTCTaGGGGCCAGCCTGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: GNVKASPPKQRDMAVAPTGKGTV*GPAWGL
Trigger: CAAGCCCCAGGCTGGCCCCCAGACTGTACCTTTCCC...TGTGGGGGCCACAGCCATGTCCCTCTGTTTAGGTGGGGATGCCTTCACGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR CCA 90 bp CCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGACAGACAAAACCCTGCCTaGACATGGCCTGTCCACGGT +
Preference number: 2 (lower is better)
Translates to: PLQRPGYHQESQAHCAQDRQNPA*TWPVHG
Trigger: ACCGTGGACAGGCCATGTCCAGGCAGGGTTTTGTCT...GTCCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CAA 90 bp TCTCCGCCTCTTTTCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTaGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTGGGG +
Preference number: 2 (lower is better)
Translates to: SPPLFPCPQACRWAD*GCPLVATRERYSLG
Trigger: CCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGAAAAGAGGCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR-3UTR GCA 90 bp CCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGACACACCCCTAAAATTATaGCTTCCTGCAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PLQRPGYHQESQAHCAQDTPLKL*LPAGAA
Trigger: AGCTGCTCCTGCAGGAAGGCATAATTTTAGGGGTGT...GTCCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR GCA 90 bp CAGACCCTGTCACACACACAGCGGAATTTCTACGTCAGGGAACGTGAAGGCATCGGCCAGCCTGGGGCTTaGAGACACACCTGGATTCTC +
Preference number: 2 (lower is better)
Translates to: QTLSHTQRNFYVREREGIGQPGA*RHTWIL
Trigger: GAGAATCCAGGTGTGTCTGCAAGCCCCAGGCTGGCC...GATGCCTTCACGTTCCCTGACGTAGAAATTCCGCTGTGTGTGTGACAGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR GCA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGTGGGCTGACTTGGGGTaGCCTCTGGTGGCAACAAGG +
Preference number: 2 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWWADLG*PLVATR
Trigger: CCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCA...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR CCA 90 bp GAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTGGGCGGTCATCTTGGCCTTTCGCTTTaGGTACTTGTCTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: ESITSSFSVWQPRLVGGHLGLSL*VLVSWQ
Trigger: CTGCCAAGAGACAAGTACCCAAAGCGAAAGGCCAAG...ATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR GCA 90 bp GAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTGGGCGGTCATAGCCTGACCTGCTTCTaGACATACATCCATCCTTCT +
Preference number: 2 (lower is better)
Translates to: ESITSSFSVWQPRLVGGHSLTCF*TYIHPS
Trigger: AGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCT...ATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR GCA 90 bp GAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTGGGCGGTCATAAAATTATGCCTTCCTaGAGGAGCAGCTCAGGATTC +
Preference number: 2 (lower is better)
Translates to: ESITSSFSVWQPRLVGGHKIMPS*RSSSGF
Trigger: GAATCCTGAGCTGCTCCTGCAGGAAGGCATAATTTT...ATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CAA 90 bp AGTGAACCGAGGCAGGGGGTGGGCCAGGGAATGCACATTGGCACATaGATATATTGCTTTCCAGTTCAAGGTGACAGACACAAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: SEPRQGVGQGMHIGT*IYCFPVQGDRHKAN
Trigger: GTTTGCTTTGTGTCTGTCACCTTGAACTGGAAAGCAATATATCAATGTGCCAATGTGCATTCCCTGGCCCACCCCCTGCCTCGGTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR TCA 90 bp GAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTGGGCGGTCATTATGGGATTCCTTCTTaGAGACAATCAGTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: ESITSSFSVWQPRLVGGHYGIPS*RQSVVF
Trigger: GAAAACCACTGATTGTCTTCAAGAAGGAATCCCATA...ATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp CGTGACGACCAGGGTCTCCTTCCCCGTGCTGGGTCCTaGGACACTTCTGGGCTGTGGAGGAGCACACTCCTG +
Preference number: 3 (lower is better)
Translates to: RDDQGLLPRAGS*DTSGLWRSTLL
Trigger: CAGGAGTGTGCTCCTCCACAGCCCAGAAGTGTCCCAGGACCCAGCACGGGGAAGGAGACCCTGGTCGTCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR-3UTR CAA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGGGGCCAGCCTGGGGCTaGCAGACACACCTGGATTCT +
Preference number: 3 (lower is better)
Translates to: THCRGQATTRKAKPTVPRGPAWG*QTHLDS
Trigger: AGAATCCAGGTGTGTCTGCAAGCCCCAGGCTGGCCC...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp ACATGGCTCTGCCTCTCAGGGGTCCCCCATGTGCTGTaGGGTTGGTGGATGCCATCGGTGGGCATACCCACC +
Preference number: 3 (lower is better)
Translates to: TWLCLSGVPHVL*GWWMPSVGIPT
Trigger: GGTGGGTATGCCCACCGATGGCATCCACCAACCCCACAGCACATGGGGGACCCCTGAGAGGCAGAGCCATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp GGCTCGGCCACTCTCCCTGCAGAAGGAATTGTAAGGTaGGTGACGACCAGGGTCTCCTTCCCCGTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: GSATLPAEGIVR*VTTRVSFPVLG
Trigger: ACCCAGCACGGGGAAGGAGACCCTGGTCGTCACGCACCTTACAATTCCTTCTGCAGGGAGAGTGGCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp CGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTaGTGGCAACAAGGGAAAGGTACAGTCTGGGGGCCA +
Preference number: 3 (lower is better)
Translates to: RRLADGLTWGAL*WQQGKGTVWGP
Trigger: TGGCCCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CCA 72 bp GGGTCTCCTTCCCCGTGCTGGGTCCTGGGACACTTCTaGGCTGTGGAGGAGCACACTCCTGAGAGGTGCATA +
Preference number: 3 (lower is better)
Translates to: GSPSPCWVLGHF*AVEEHTPERCI
Trigger: TATGCACCTCTCAGGAGTGTGCTCCTCCACAGCCCAGAAGTGTCCCAGGACCCAGCACGGGGAAGGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp AGACAACTACTCCGACTCCCACCCAGCGACAGGGATTaGGGTGGGAGGGCCGCAGGTGGGCTAGCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: RQLLRLPPSDRD*GGRAAGGLAFH
Trigger: ATGGAAAGCTAGCCCACCTGCGGCCCTCCCACCTCAATCCCTGTCGCTGGGTGGGAGTCGGAGTAGTTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp GCCTCTTTTCCCTTGTCCGCAGGCTTGCAGATGGGCTaGCTTGGGGTGCCCTCTGGTGGCAACAAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: ASFPLSAGLQMG*LGVPSGGNKGK
Trigger: CTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGAAAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR GCA 72 bp CCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTaGCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTG +
Preference number: 3 (lower is better)
Translates to: PCPQACRWADLG*PLVATRERYSL
Trigger: CAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CCA 72 bp AACCGAGTCTGCTCAGACGGGAGCAAGGGAAGGGAGTaGTCTCTTAGATGGGGCAACGAGGGAGAGAGACAG +
Preference number: 3 (lower is better)
Translates to: NRVCSDGSKGRE*SLRWGNEGERQ
Trigger: CTGTCTCTCTCCCTCGTTGCCCCATCTAAGAGACCACTCCCTTCCCTTGCTCCCGTCTGAGCAGACTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp TCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTaGGCGGTCATAACGGACTGGGGCCGTCATTCTCTT +
Preference number: 3 (lower is better)
Translates to: SLLPLASGSHAW*AVITDWGRHSL
Trigger: AAGAGAATGACGGCCCCAGTCCGTTATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp GTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTaGTGGGCGGTCATAACGGACTGGGGCCGTCATTCT +
Preference number: 3 (lower is better)
Translates to: VSLLPLASGSHA*WAVITDWGRHS
Trigger: AGAATGACGGCCCCAGTCCGTTATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp CCTGGGACACTTCTGGGCTGTGGAGGAGCACACTCCTaGGAGGTGCATAGAGAGCCCAGACAAGAGTATCAG +
Preference number: 3 (lower is better)
Translates to: PGTLLGCGGAHS*EVHREPRQEYQ
Trigger: CTGATACTCTTGTCTGGGCTCTCTATGCACCTCTCAGGAGTGTGCTCCTCCACAGCCCAGAAGTGTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp TGTATTTTCTTTGCCAGCTTAGAGGCCTGCAAGGCGTaGGGCGGTAAGAGAGGCAGCCCCAGTCACTGCTGC +
Preference number: 3 (lower is better)
Translates to: CIFFASLEACKA*GGKRGSPSHCC
Trigger: GCAGCAGTGACTGGGGCTGCCTCTCTTACCGCCTCACGCCTTGCAGGCCTCTAAGCTGGCAAAGAAAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp CTTGGAGCAGAGATGGCTGAGAAAGGTAACCGAGTCTaGTCAGACGGGAGCAAGGGAAGGGAGTGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: LGAEMAEKGNRV*SDGSKGREWSL
Trigger: AAGAGACCACTCCCTTCCCTTGCTCCCGTCTGAGCAGACTCGGTTACCTTTCTCAGCCATCTCTGCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp ATGCTGCCAAGGCTGGTCCTGAGCTCATGGCAACTCTaGCTCTGTCACCCAAGGGTGGGATTCTACCCTTTA +
Preference number: 3 (lower is better)
Translates to: MLPRLVLSSWQL*LCHPRVGFYPL
Trigger: TAAAGGGTAGAATCCCACCCTTGGGTGACAGAGGCAGAGTTGCCATGAGCTCAGGACCAGCCTTGGCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp ATAAGCATGATGCTGCCAAGGCTGGTCCTGAGCTCATaGCAACTCTGCCTCTGTCACCCAAGGGTGGGATTC +
Preference number: 3 (lower is better)
Translates to: ISMMLPRLVLSS*QLCLCHPRVGF
Trigger: GAATCCCACCCTTGGGTGACAGAGGCAGAGTTGCCATGAGCTCAGGACCAGCCTTGGCAGCATCATGCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp GTCACACACACAGCGGAATTTCTACGTCAGGGAACGTaGAGGCATCCCCACCTAAACAGAGGGACATGGCTG +
Preference number: 3 (lower is better)
Translates to: VTHTAEFLRQGT*RHPHLNRGTWL
Trigger: CAGCCATGTCCCTCTGTTTAGGTGGGGATGCCTTCACGTTCCCTGACGTAGAAATTCCGCTGTGTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp CACTTCTGGGCTGTGGAGGAGCACACTCCTGAGAGGTaGATAGAGAGCCCAGACAAGAGTATCAGAGAACAG +
Preference number: 3 (lower is better)
Translates to: HFWAVEEHTPER*IESPDKSIREQ
Trigger: CTGTTCTCTGATACTCTTGTCTGGGCTCTCTATGCACCTCTCAGGAGTGTGCTCCTCCACAGCCCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp GGACAGGCAGTCTACACCCCTAAAATTATGCCTTCCTaGAGGAGCAGCTCAGGATTCAAGTCTCTCGTCAGC +
Preference number: 3 (lower is better)
Translates to: GQAVYTPKIMPS*RSSSGFKSLVS
Trigger: GCTGACGAGAGACTTGAATCCTGAGCTGCTCCTGCAGGAAGGCATAATTTTAGGGGTGTAGACTGCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp TCCTCACGGGACAGGCAGTCTACACCCCTAAAATTATaGCTTCCTGCAGGAGCAGCTCAGGATTCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: SSRDRQSTPLKL*LPAGAAQDSSL
Trigger: GAGACTTGAATCCTGAGCTGCTCCTGCAGGAAGGCATAATTTTAGGGGTGTAGACTGCCTGTCCCGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp AACAGCCAAACTAGAGGAGCCCAGTGGGTCCAAAAATaGTCAAGAGCAGACCAATGGGTAGCTCTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: NSQTRGAQWVQK*SRADQWVALLR
Trigger: CCTCAGCAGAGCTACCCATTGGTCTGCTCTTGAGCATTTTTGGACCCACTGGGCTCCTCTAGTTTGGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp AAATTACACCGCAGGAAGGGTCTCATTCCCACTCTGTaGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATT +
Preference number: 3 (lower is better)
Translates to: KLHRRKGLIPTL*AGSLVPVFQVI
Trigger: AATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCTGCGGTGTAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CCA 72 bp AGGCCCCTTGGCCTTTCGCTTTGGGTACTTGTCTCTTaGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTA +
Preference number: 3 (lower is better)
Translates to: RPLGLSLWVLVS*QMAQSFGMAKL
Trigger: TAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCCAAAGCGAAAGGCCAAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CCA 72 bp AAGCCACTAGAGGAAACTGCTGTCTTGGAGCAGAGATaGCTGAGAAAGGTAACCGAGTCTGCTCAGACGGGA +
Preference number: 3 (lower is better)
Translates to: KPLEETAVLEQR*LRKVTESAQTG
Trigger: TCCCGTCTGAGCAGACTCGGTTACCTTTCTCAGCCATCTCTGCTCCAAGACAGCAGTTTCCTCTAGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp AGGAAGCCGGCTCTCAAAGGAAGACAAAACCCTGCCTaGACATGGCCTGTCCACGGTGTACATTCTAGTATC +
Preference number: 3 (lower is better)
Translates to: RKPALKGRQNPA*TWPVHGVHSSI
Trigger: GATACTAGAATGTACACCGTGGACAGGCCATGTCCAGGCAGGGTTTTGTCTTCCTTTGAGAGCCGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp AGAGAGCCCAGACAAGAGTATCAGAGAACAGGAGCCTaGCCTGCTTCTGCACATACATCCATCCTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: REPRQEYQRTGA*PASAHTSILLG
Trigger: TCCCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACTCTTGTCTGGGCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp CCAGGCCTGACTTTCCTAGCCTTCTTCCCATATTTCTaGTGCTCTGGAGGGAGGCATCAGAAACGACTCCAA +
Preference number: 3 (lower is better)
Translates to: PGLTFLAFFPYF*CSGGRHQKRLQ
Trigger: TTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGAAGAAGGCTAGGAAAGTCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp GGCAGGGGGTGGGCCAGGGAATGCACATTGGCACATTaGTATATTGCTTTCCAGTTCAAGGTGACAGACACA +
Preference number: 3 (lower is better)
Translates to: GRGWARECTLAH*YIAFQFKVTDT
Trigger: TGTGTCTGTCACCTTGAACTGGAAAGCAATATATCAATGTGCCAATGTGCATTCCCTGGCCCACCCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp TACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATaGCTAAATTACACCGCAGGAAGGGTCTCATTCCCA +
Preference number: 3 (lower is better)
Translates to: YLSLGRWPRASE*LNYTAGRVSFP
Trigger: TGGGAATGAGACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CCA 72 bp TGGACTGGGATGAACAGCCAAACTAGAGGAGCCCAGTaGGTCCAAAAATGCTCAAGAGCAGACCAATGGGTA +
Preference number: 3 (lower is better)
Translates to: WTGMNSQTRGAQ*VQKCSRADQWV
Trigger: TACCCATTGGTCTGCTCTTGAGCATTTTTGGACCCACTGGGCTCCTCTAGTTTGGCTGTTCATCCCAGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CCA 72 bp GACTTTCCTAGCCTTCTTCCCATATTTCTGATGCTCTaGAGGGAGGCATCAGAAACGACTCCAAACAAAAGG +
Preference number: 3 (lower is better)
Translates to: DFPSLLPIFLML*REASETTPNKR
Trigger: CCTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGAAGAAGGCTAGGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp GTGGGCCAGGGAATGCACATTGGCACATTGATATATTaGTTTCCAGTTCAAGGTGACAGACACAAAGCAAAC +
Preference number: 3 (lower is better)
Translates to: VGQGMHIGTLIY*FPVQGDRHKAN
Trigger: GTTTGCTTTGTGTCTGTCACCTTGAACTGGAAAGCAATATATCAATGTGCCAATGTGCATTCCCTGGCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR TCA 72 bp CTGTCACCCAAGGGTGGGATTCTACCCTTTAAGAAATaGTGCAAGGGTTTATGGGATTCCTTCTTGAAGACA +
Preference number: 3 (lower is better)
Translates to: LSPKGGILPFKK*CKGLWDSFLKT
Trigger: TGTCTTCAAGAAGGAATCCCATAAACCCTTGCATCATTTCTTAAAGGGTAGAATCCCACCCTTGGGTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR GCA 72 bp CGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTaGTGTCTTGGAGCAGAGATGGCTGAGAAAGGTAAC +
Preference number: 3 (lower is better)
Translates to: RIKVLKQATRGN*CLGAEMAEKGN
Trigger: GTTACCTTTCTCAGCCATCTCTGCTCCAAGACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp GGGAACGTGAAGGCATCCCCACCTAAACAGAGGGACATGGCTGTGGCCCCCACAGGGATCCAGGGCGCCTaGGGCCAGGCTGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GNVKASPPKQRDMAVAPTGIQGA*GQAASA
Trigger: GGCAGAGGCAGCCTGGCCTCAGGCGCCCTGGATCCC...TGTGGGGGCCACAGCCATGTCCCTCTGTTTAGGTGGGGATGCCTTCACGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTGGTGGCAATCCGAGTCCGGGAACTaGGCCCTCCACGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SLVRRLADGLTWGALWWQSESGN*ALHASA
Trigger: CGCCGAGGCGTGGAGGGCGCAGTTCCCGGACTCGGA...TTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp GGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTGGGGGCCAGCCTGGGTGGTGGCTCCACTGCTaGACTCGGGGGAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GVPSGGNKGKVQSGGQPGWWLHC*TRGNSP
Trigger: TGGGCTGTTCCCCCGAGTGCAGCAGTGGAGCCACCA...CCCAGGCTGGCCCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp AGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGCCGAGCGCAGCTCCATaGGCGGCGGCTCCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RKGLIPTLWAGSLVPVFQPSAAP*AAAPSP
Trigger: CGGACTCGGAGCCGCCGCGCATGGAGCTGCGCTCGG...CTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTGGTGGCAAGTAATGGGGTCTGGGTaGTTCCCCCAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLVRRLADGLTWGALWWQVMGSG*FPQALP
Trigger: GGGCAGGGCCTGGGGGAAGCACCCAGACCCCATTAC...TTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGTGCTGGTGGCTCCACTaGTGCACTCGGGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: THCRGQATTRKAKPTVPRCWWLH*CTRGNS
Trigger: GCTGTTCCCCCGAGTGCAGCAGTGGAGCCACCAGCA...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp ACTTGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTGGGGGCCAGCCGTGAACAGGAAGATGTaGCGCAGCTTGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TWGALWWQQGKGTVWGPAVNRKM*RSLRAP
Trigger: GGGGGCCCGCAAGCTGCGTCACATCTTCCTGTTCAC...GGCTGGCCCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp ACTTGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTGGGGGCCAGCCCAGCGCTCCAGCTCCTaGTCGATGTCACCCACCGAG +
Preference number: 4 (lower is better)
Translates to: TWGALWWQQGKGTVWGPAQRSSS*SMSPTE
Trigger: CTCGGTGGGTGACATCGAGCAGGAGCTGGAGCGCTG...GGCTGGCCCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp GCAGGAGTCCTCACGGGACAGGCAGTCTACACCCCTAAAATTATGCCTTCCTGCGCTTCCCCCAGGCCCTaGCCGGCGCTCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AGVLTGQAVYTPKIMPSCASPRP*PALCWD
Trigger: GTCCCAGCAGAGCGCCGGGCAGGGCCTGGGGGAAGC...GCAGGAAGGCATAATTTTAGGGGTGTAGACTGCCTGTCCCGTGAGGACTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGACGCAGGAGAGGGCTCTTaGCCTCCCCTTCCACCATCA +
Preference number: 4 (lower is better)
Translates to: PLQRPGYHQESQAHCAQDAGEGS*PPLPPS
Trigger: TGATGGTGGAAGGGGAGGGCAAGAGCCCTCTCCTGC...GTCCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGCAGGCTGAGAGGTGGTaGCAGCGGCTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: THCRGQATTRKAKPTVPRQAERW*QRLSEA
Trigger: AGCCTCTGAAAGCCGCTGCCACCACCTCTCAGCCTG...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp TCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTGGTGGCAATCAGACACCACAACCTaGCACTGCCGGTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: SLVRRLADGLTWGALWWQSDTTT*HCRCRF
Trigger: GAAGCGGCACCGGCAGTGCCAGGTTGTGGTGTCTGA...TTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGACCTTTCAGAGGCTTCATaGGCAGCAGCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLQRPGYHQESQAHCAQDLSEAS*AAAGPP
Trigger: TGGAGGCCCTGCTGCTGCCCATGAAGCCTCTGAAAG...GTCCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp ACCGCAGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTACATGCGGTAGGTGGTaGGGCTTGGTGACACGCGGC +
Preference number: 4 (lower is better)
Translates to: TAGRVSFPLCGRVLSSQFTCGRW*GLVTRG
Trigger: GCCGCGTGTCACCAAGCCCCACCACCTACCGCATGT...AAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCTGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTGCACAGGCTGAGAGGTaGTGGCAGCGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLADTPGFSQAPWPFALGAQAER*WQRLSE
Trigger: CTCTGAAAGCCGCTGCCACCACCTCTCAGCCTGTGC...ACCCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TGGGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGACACCTCTTTGTCGTTaGCCTTCACCAGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: WGLQTHLDSRRPLGLSLWTPLCR*PSPGRA
Trigger: AGCGCGGCCTGGTGAAGGTCAACGACAAAGAGGTGT...CCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp ACCGCAGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTCGAATTCTGCGAGGGTaGGCGGCTCTTGTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: TAGRVSFPLCGRVLSSQFRILRG*AALVPE
Trigger: TTCCGGGACAAGAGCCGCTCACCCTCGCAGAATTCG...AAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCTGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp ACTTGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTGGGGGCCAGCCGCCAAGGGGGCCTGTTaGCGCCGTTGGCATTTATTA +
Preference number: 4 (lower is better)
Translates to: TWGALWWQQGKGTVWGPAAKGAC*RRWHLL
Trigger: TAATAAATGCCAACGGCGGCAACAGGCCCCCTTGGC...GGCTGGCCCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp ACCGCAGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCACTGGGCCAGATCTaGCCAGTCTTGCGGACACCC +
Preference number: 4 (lower is better)
Translates to: TAGRVSFPLCGRVLSSQFSLGQI*PVLRTP
Trigger: GGGTGTCCGCAAGACTGGGCAGATCTGGCCCAGTGA...AAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCTGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp GAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTGGGCGGTCATACCACAACCTGGCACTaGCGGTGCCGCTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ESITSSFSVWQPRLVGGHTTTWH*RCRFWH
Trigger: GTGCCAGAAGCGGCACCGGCAGTGCCAGGTTGTGGT...ATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGAGATGTGACGCAGCTTaGGGGCCCCCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILRCDAA*GPPPPA
Trigger: AGCTGGTGGAGGGGGCCCGCAAGCTGCGTCACATCT...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GAAAGTATCACTTCTTCCTTTAGCGTCTGGCAGCCACGCCTGGTGGGCGGTCATACCAGGCCGCGCTCGTaGTGGAACTCGACGTTCACG +
Preference number: 4 (lower is better)
Translates to: ESITSSFSVWQPRLVGGHTRPRS*WNSTFT
Trigger: CGTGAACGTCGAGTTCCACCACGAGCGCGGCCTGGT...ATGACCGCCCACCAGGCGTGGCTGCCAGACGCTAAAGGAAGAAGTGATACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTCGCGGAAGGCCATGCTaGGAGACATTAACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLADTPGFSQAPWPFALGRGRPC*ETLTAA
Trigger: TGCTGCTGTTAATGTCTCCCAGCATGGCCTTCCGCG...ACCCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTGGTGGCAAGGTGCAGTAGAGATTTaGGCTCTGCTTAAAGCCGGT +
Preference number: 4 (lower is better)
Translates to: SLVRRLADGLTWGALWWQGAVEI*ALLKAG
Trigger: ACCGGCTTTAAGCAGAGCTCAAATCTCTACTGCACC...TTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTACTTGTCTCTTGGCAGCAGCAGGTTCAGCATaGAGCTCTCCTTTGCGACGG +
Preference number: 4 (lower is better)
Translates to: PGFSQAPWPFALGTCLLAAAGSA*SSPLRR
Trigger: CCGTCGCAAAGGAGAGCTGCATGCTGAACCTGCTGC...TGCCAAGAGACAAGTACCCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR CCA 90 bp CTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCTGCGCTCCATTTGCATaGCCTGGCTGCCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LGRWPRASEWLNYTAGRVCAPFA*PGCPGN
Trigger: GTTCCCTGGGCAGCCAGGCCATGCAAATGGAGCGCA...GACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CAA 72 bp CTTTTCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTaGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LFPCPQACRWAD*GCPLVATRERY
Trigger: GTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR GCA 90 bp AGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGTCCTGGTTCACCTCCTaGTCCAAGCGCCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: RKGLIPTLWAGSLVPVFQSWFTS*SKRLME
Trigger: CTCCATTAGGCGCTTGGAGCAGGAGGTGAACCAGGA...CTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CAGACCCTGTCACACACACAGCGGAATTTCTACGTCAGGGAACGTGAAGGCATCGAGGCGAGTAGGACCTaGGAGGCCAGGTTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: QTLSHTQRNFYVREREGIEASRT*EARLGV
Trigger: AACGCCTAACCTGGCCTCGCAGGTCCTACTCGCCTC...GATGCCTTCACGTTCCCTGACGTAGAAATTCCGCTGTGTGTGTGACAGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGATTCGGAGGGCGTCTTaGAGCAGGGAATGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILIRRAS*SREWSG
Trigger: TCCCGACCATTCCCTGCTGCAAGACGCCCTCCGAAT...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGAGCAGGGCCTCCAGATaGCTCAGGTACGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSWQMAQSFGMAKLHRRKSRASR*LRYVSS
Trigger: CGAGGAGACGTACCTGAGCCATCTGGAGGCCCTGCT...CTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CAGACCCTGTCACACACACAGCGGAATTTCTACGTCAGGGAACGTGAAGGCATCCGGTACACACCCAGCTaGCTGGCCAGCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QTLSHTQRNFYVREREGIRYTPS*LASFWK
Trigger: CTTCCAGAAGCTGGCCAGCCAGCTGGGTGTGTACCG...GATGCCTTCACGTTCCCTGACGTAGAAATTCCGCTGTGTGTGTGACAGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTGGGTCCAGCTGGACCTaGCCTTTCCCCATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGGSSWT*PFPMSL
Trigger: CAAGCTCATGGGGAAAGGCCAGGTCCAGCTGGACCC...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGCTGTCCTGTAGGGTTTaGGGGTCCAGCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VSWQMAQSFGMAKLHRRKLSCRV*GSSLPL
Trigger: CAGGGGCAAGCTGGACCCCCAAACCCTACAGGACAG...CTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218465.2
CDS-3UTR TCA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGTCTCGAAGTTGGATCTaGGCGCCGCCACGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWSRSWI*APPRWW
Trigger: CCACCAGCGTGGCGGCGCTCAGATCCAACTTCGAGA...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGGCTGCCCAGGGAACTaGTTCGGTCGGACACCTCTT +
Preference number: 4 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTGCPGN*FGRTPL
Trigger: AAGAGGTGTCCGACCGAATCAGTTCCCTGGGCAGCC...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGCCTCCTCGCTGGAGGTaGGGTTCTCGTTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWPPRWR*GSRWSC
Trigger: GCAGCTCCAACGAGAACCTCACCTCCAGCGAGGAGG...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTTTCTTGCGCTCCATTTaGATGGCCTGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGFLRSI*MAWLPR
Trigger: CCTGGGCAGCCAGGCCATGCAAATGGAGCGCAAGAA...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGTCTCCTGCTCTGAAGTaGTCTGGCTTCGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILSPALK*SGFAGE
Trigger: CTCTCCTGCGAAGCCAGAGCACTTCAGAGCAGGAGA...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTGGTGGCAACTTGCTGCCCTTATTTaGTCTCTTCTCTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLVRRLADGLTWGALWWQLAALI*SLLSLD
Trigger: ATCCAACGAGAGAAGAGAGCAAATAAGGGCAGCAAG...TTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTGCAGCAGGTTCAGCATaGAGCTCTCCTTTGCGACGG +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGAAGSA*SSPLRR
Trigger: CCGTCGCAAAGGAGAGCTGCATGCTGAACCTGCTGC...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR GCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTTTTGGGGGTCCAGCTTaGCCCTGCACACCAGACATC +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGFGGPA*PCTPDI
Trigger: GATGTCTGGTGTGCAGGGGCAAGCTGGACCCCCAAA...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218465.2
CDS-3UTR CCA 90 bp CAGACCCTGTCACACACACAGCGGAATTTCTACGTCAGGGAACGTGAAGGCATCATGCGGAAGCGCTCCTaGTTCACCTCCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QTLSHTQRNFYVREREGIMRKRS*FTSCSK
Trigger: CTTGGAGCAGGAGGTGAACCAGGAGCGCTTCCGCAT...GATGCCTTCACGTTCCCTGACGTAGAAATTCCGCTGTGTGTGTGACAGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGCCTACACGCTGCTGGTaGCTCCACTGCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWPTRCW*LHCCTR
Trigger: CCGAGTGCAGCAGTGGAGCCACCAGCAGCGTGTAGG...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCTCCCCTACACGCTGCTaGTGGCTCCACTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTSPTRC*WLHCCT
Trigger: AGTGCAGCAGTGGAGCCACCAGCAGCGTGTAGGGGA...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GGGAACGTGAAGGCATCCCCACCTAAACAGAGGGACATGGCTGTGGCCCCCACATCTCTGCAGTTTCCATaGCCACTCCGTAGTTATCCA +
Preference number: 4 (lower is better)
Translates to: GNVKASPPKQRDMAVAPTSLQFP*PLRSYP
Trigger: TGGATAACTACGGAGTGGCCATGGAAACTGCAGAGA...TGTGGGGGCCACAGCCATGTCCCTCTGTTTAGGTGGGGATGCCTTCACGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGTTACAGTCATATTGCTaGGTTTTGCCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: THCRGQATTRKAKPTVPRLQSYC*VLPPLC
Trigger: GCAAAGTGGAGGCAAAACCCAGCAATATGACTGTAA...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp ACCGCAGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTAATTCATCCACCATCTaGAAGCTGAGGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: TAGRVSFPLCGRVLSSQFNSSTI*KLRSVS
Trigger: GCTCACGGACCTCAGCTTCCAGATGGTGGATGAATT...AAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCAGCAACACTTGGACCTaGGACATGACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGRWPRASEWLNYTAGRVSNTWT*DMTSRD
Trigger: GTCCCTGGAGGTCATGTCCCAGGTCCAAGTGTTGCT...GACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
3UTR CAA 72 bp CCCCAGCTACTTGTACGCCAGCCCTACACAGTAGTCTaGGCTGTCCAGATAAGCATGATGCTGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PQLLVRQPYTVV*AVQISMMLPRL
Trigger: CAGCCTTGGCAGCATCATGCTTATCTGGACAGCCAAGACTACTGTGTAGGGCTGGCGTACAAGTAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGGAATCTGCTTCCCCTTaGAAGGTGCTGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILESASP*KVLSPS
Trigger: TGATGGGGACAGCACCTTTCAAGGGGAAGCAGATTC...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp GGGAACGTGAAGGCATCCCCACCTAAACAGAGGGACATGGCTGTGGCCCCCACACGTCATCTTCTTTGTTaGTGGTCAGTGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: GNVKASPPKQRDMAVAPTRHLLC*WSVECG
Trigger: ACCACATTCCACTGACCATCAACAAAGAAGATGACG...TGTGGGGGCCACAGCCATGTCCCTCTGTTTAGGTGGGGATGCCTTCACGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCTTAAAGCCGGTGGCTaGGTGGACGATGACATGCAG +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGLKAGG*VDDDMQ
Trigger: CTGCATGTCATCGTCCACTCAGCCACCGGCTTTAAG...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp ACTTGGGGTGCCCTCTGGTGGCAACAAGGGAAAGGTACAGTCTGGGGGCCAGCCACACATCCTTGTTATTaGCATCAAAGGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TWGALWWQQGKGTVWGPATHPCY*HQRLPS
Trigger: TGAAGGCAGCCTTTGATGTCAATAACAAGGATGTGT...GGCTGGCCCCCAGACTGTACCTTTCCCTTGTTGCCACCAGAGGGCACCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR GCA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGTCTGCAGGTAGATCATaGGGAAGCGCTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILSAGRS*GSAPGS
Trigger: TGAACCAGGAGCGCTTCCGCATGATCTACCTGCAGA...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp CTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCTCTGCTGGGACTTCTTaGGCTCCATTTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LGRWPRASEWLNYTAGRVSAGTS*APFAWP
Trigger: AGGCCATGCAAATGGAGCGCAAGAAGTCCCAGCAGA...GACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TTTGGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACAGGTCCCCTACACGCTaGTGGTGGCTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FGYLSLGRWPRASEWLNYRSPTR*WWLHCC
Trigger: GCAGCAGTGGAGCCACCAGCAGCGTGTAGGGGACCT...GTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGTTGAAACATTTCTTCTaGTGCTCTCGGATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: THCRGQATTRKAKPTVPRLKHFF*CSRMLS
Trigger: AGAAAGCATCCGAGAGCAGCAGAAGAAATGTTTCAA...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGCTCTGCCTTTGCTGCTaGGGTGTGGCGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWLCLCC*GVARKK
Trigger: CTTCTTCCTCGCCACACCTCAGCAGCAAAGGCAGAG...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTAGAGGAGCAGGTCAGTaGACAGGAAGATGTGACGCA +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGRGAGQ*TGRCDA
Trigger: TGCGTCACATCTTCCTGTTCACTGACCTGCTCCTCT...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTTCCTCAGCCTCTCCATaGCCTTGCTGCCCTTATTTG +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGSSASP*PCCPYL
Trigger: CAAATAAGGGCAGCAAGGTCATGGAGAGGCTGAGGA...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCCTTTGCGACGGGGTCTaGAAGAGCAATGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTLCDGV*KSNAFC
Trigger: GCAGAAGGCATTGCTCTTTCAGACCCCGTCGCAAAG...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR GCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCTGTCAAAGGACTGCTaGGAATTCTGCGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGLSKDC*EFCEGE
Trigger: CTCACCCTCGCAGAATTCGCAGCAGTCCTTTGACAG...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp GTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGCTGCTGTCAAAGGACTaGTGCGAATTCTGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VSWQMAQSFGMAKLHRRKLLSKD*CEFCEG
Trigger: ACCCTCGCAGAATTCGCAGCAGTCCTTTGACAGCAG...CTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp AGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGAATCCACCTCCAGGGTaGAGTAGAGATTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKGLIPTLWAGSLVPVFQNPPPG*SRDLSS
Trigger: AGAGCTCAAATCTCTACTGCACCCTGGAGGTGGATT...CTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCTTTGCTTCTTCAGCTTaGTGCAGAGGAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGRWPRASEWLNYTAGRVFASSA*CRGAGQ
Trigger: CTGACCTGCTCCTCTGCACCAAGCTGAAGAAGCAAA...GACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCAGCAACACTTGGACCTaGGACATGACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTSNTWT*DMTSRD
Trigger: GTCCCTGGAGGTCATGTCCCAGGTCCAAGTGTTGCT...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR CCA 90 bp GCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTTGTCACCTTCCAGGTCAGCCTCCGTTCTGGACCTaGCCTTTCCCCATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AHSLLAGDSLNSCHLPGQPPFWT*PFPMSL
Trigger: CAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGG...CTGACCTGGAAGGTGACAACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR TCA 90 bp AGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGAGAGCTCAGGCACTTTaGAGAAAATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: RKGLIPTLWAGSLVPVFQRAQAL*RKWSQS
Trigger: AGATTGAGACCATTTTCTTCAAAGTGCCTGAGCTCT...CTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TTTGGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACCTTTGCGACGGGGTCTaGAAGAGCAATGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FGYLSLGRWPRASEWLNYLCDGV*KSNAFC
Trigger: GCAGAAGGCATTGCTCTTTCAGACCCCGTCGCAAAG...GTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR TCA 90 bp AACTGCACGAGGGCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTTGTCACCTTAAAGCCGGTGGCTaGGTGGACGATGACATGCAN +
Preference number: 4 (lower is better)
Translates to: NCTRAHSLLAGDSLNSCHLKAGG*VDDDMX
Trigger: NTGCATGTCATCGTCCACTCAGCCACCGGCTTTAAG...GTGACAACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGCCCTCGTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR GCA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGTTAGGCGTTTCTCCTaGTCTGAAGTGCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTVRRFS*SEVLWL
Trigger: AAGCCAGAGCACTTCAGAGCAGGAGAAACGCCTAAC...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGCTGACAGCACTTCTCTaGAGTTTCCATGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWLTALL*SFHGHS
Trigger: GGAGTGGCCATGGAAACTGCAGAGAAGTGCTGTCAG...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp GTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGTTCTCAGAGATTTCTaGAAACTGAGCGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VSWQMAQSFGMAKLHRRKVLRDF*KLSVGL
Trigger: CAGGCCAACGCTCAGTTTGCAGAAATCTCTGAGAAC...CTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
3UTR CAA 72 bp AGGCAGGGGGTGGGCCAGGGAATGCACATTGGCACATaGATATATTGCTTTCCAGTTCAAGGTGACAGACAC +
Preference number: 4 (lower is better)
Translates to: RQGVGQGMHIGT*IYCFPVQGDRH
Trigger: GTGTCTGTCACCTTGAACTGGAAAGCAATATATCAATGTGCCAATGTGCATTCCCTGGCCCACCCCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TGTACGAACTGCACGAGGGCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTGGTGCAGTAGAGATTTaGGCTCTGCTTAAAGCCGGT +
Preference number: 4 (lower is better)
Translates to: CTNCTRAHSLLAGDSLNSGAVEI*ALLKAG
Trigger: ACCGGCTTTAAGCAGAGCTCAAATCTCTACTGCACC...ACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGCCCTCGTGCAGTTCGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR GCA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGTTTTGCCTCCACTTTaGTTCTTCAGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTVLPPL*FFSLVQ
Trigger: CTGCACCAAGCTGAAGAAGCAAAGTGGAGGCAAAAC...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TGGGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTAGACTCGAGTCTTTaGTTTATTCACAAAATATCC +
Preference number: 4 (lower is better)
Translates to: WGLQTHLDSRRPLGLSLWVDSSL*FIHKIS
Trigger: GGATATTTTGTGAATAAAGCAAAGACTCGAGTCTAC...CCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp TCCCATATTTCTGATGCTCTGGAGGGAGGCATCAGAAACGACTCCAAACAAAAGGGTACGTCTCCTCGCTaGCCAGGATTCCGGACAAAA +
Preference number: 4 (lower is better)
Translates to: SHISDALEGGIRNDSKQKGTSPR*PGFRTK
Trigger: TTTTGTCCGGAATCCTGGCCAGCGAGGAGACGTACC...CTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTACACATCCTTGTTATTaGCATCAAAGGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGTHPCY*HQRLPS
Trigger: TGAAGGCAGCCTTTGATGTCAATAACAAGGATGTGT...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS-3UTR GCA 90 bp GCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTTGTCACCTTCCAGGTCAGAATCCACCTCCAGGGTaGAGTAGAGATTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AHSLLAGDSLNSCHLPGQNPPPG*SRDLSS
Trigger: AGAGCTCAAATCTCTACTGCACCCTGGAGGTGGATT...CTGACCTGGAAGGTGACAACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR CCA 90 bp TCCCATATTTCTGATGCTCTGGAGGGAGGCATCAGAAACGACTCCAAACAAAAGCTGCAAACTGAGCGTTaGCCTGACAGCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHISDALEGGIRNDSKQKLQTER*PDSTSL
Trigger: CAGAGAAGTGCTGTCAGGCCAACGCTCAGTTTGCAG...CTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp TTTGGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACCATCCTTGTTGCTTCTaGCTCGCAGGTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FGYLSLGRWPRASEWLNYHPCCF*LAGSQR
Trigger: TCTCTGAGAACCTGCGAGCCAGAAGCAACAAGGATG...GTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp TCCCATATTTCTGATGCTCTGGAGGGAGGCATCAGAAACGACTCCAAACAAAAGATCCAGTTCCTCATCTaGCACCAGAGGGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: SHISDALEGGIRNDSKQKIQFLI*HQRDVG
Trigger: CCCAACATCCCTCTGGTGCCAGATGAGGAACTGGAT...CTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp GCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTTGTCACCTTCCAGGTCAGCTACTCTTTCTCTTGTaGAACCTCCGTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: AHSLLAGDSLNSCHLPGQLLFLL*NLRSGP
Trigger: AGGTCCAGAACGGAGGTTCCACAAGAGAAAGAGTAG...CTGACCTGGAAGGTGACAACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR GCA 90 bp GTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGCATTTACAGTCATATTaGTGGGTTTTGCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: VSWQMAQSFGMAKLHRRKHLQSY*WVLPPL
Trigger: AAGTGGAGGCAAAACCCAGCAATATGACTGTAAATG...CTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp CAAAAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTGCTGTTTGCCGTTGCGACTGTaGACGCGGAAGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QKLFRIKVLKQATRGNCCLPLRL*TRKAML
Trigger: CAGCATGGCCTTCCGCGTTCACAGTCGCAACGGCAA...ACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CAAAAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTGCTGTTGCCCGGCGCTCTGCTaGGACTTCTTGCGCTCCATT +
Preference number: 4 (lower is better)
Translates to: QKLFRIKVLKQATRGNCCCPALC*DFLRSI
Trigger: AATGGAGCGCAAGAAGTCCCAGCAGAGCGCCGGGCA...ACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CAAAAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTGCTGTCTGTCCTGTAGGGTTTaGGGGTCCAGCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: QKLFRIKVLKQATRGNCCLSCRV*GSSWTW
Trigger: CCAGGTCCAGCTGGACCCCCAAACCCTACAGGACAG...ACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CCA 90 bp CAAAAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTGCTGTTGCTGTCCCCATCACTaGGCCAGATCTGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QKLFRIKVLKQATRGNCCCCPHH*ARSAQS
Trigger: AGACTGGGCAGATCTGGCCCAGTGATGGGGACAGCA...ACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR TCA 90 bp TCCCATATTTCTGATGCTCTGGAGGGAGGCATCAGAAACGACTCCAAACAAAAGAGAGTTCTTGGTAGTTaGGTCCTTGACATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SHISDALEGGIRNDSKQKRVLGS*VLDILV
Trigger: AACAAGGATGTCAAGGACTCAACTACCAAGAACTCT...CTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp TCCCATATTTCTGATGCTCTGGAGGGAGGCATCAGAAACGACTCCAAACAAAAGCATATTGCTGGGTTTTaGCTCCACTTTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHISDALEGGIRNDSKQKHIAGF*LHFASS
Trigger: TGAAGAAGCAAAGTGGAGGCAAAACCCAGCAATATG...CTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR GCA 90 bp ACGAACTGCACGAGGGCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTTGTGTAGACTCGAGTCTTTaGTTTATTCACAAAATATCC +
Preference number: 4 (lower is better)
Translates to: TNCTRAHSLLAGDSLNSCVDSSL*FIHKIS
Trigger: GGATATTTTGTGAATAAAGCAAAGACTCGAGTCTAC...ACAACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGCCCTCGTGCAGTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR GCA 90 bp CAAAAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTGCTGTAAAATGGTCTCAATCTaGTGGCTGGTCAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: QKLFRIKVLKQATRGNCCKMVSI*WLVSTG
Trigger: GCCTGTGCTGACCAGCCAGCAGATTGAGACCATTTT...ACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 90 bp TCCTGCTCCAAGCGCCTAATGGAGGCCTTGCAGCGCTCCAGCTCCTaGTCGATGTCACCCACCGAGCGCAGCTCCATGCGCGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: SCSKRLMEALQRSSS*SMSPTERSSMRGGS
Trigger: GGAGCCGCCGCGCATGGAGCTGCGCTCGGTGGGTGACATCGAGCAGGAGCTGGAGCGCTGCAAGGCCTCCATTAGGCGCTTGGAGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 90 bp GTAGGGCAGCCCGTCCTGGTGCCGGCGCTGTTCCTCAGCCTGGTCTaGGGCACAGCCATATCCAGGTGGTGTTCCAAACGAGGAATCTGC +
Preference number: 5 (lower is better)
Translates to: VGQPVLVPALFLSLV*GTAISRWCSKRGIC
Trigger: GCAGATTCCTCGTTTGGAACACCACCTGGATATGGCTGTGCCGCAGACCAGGCTGAGGAACAGCGCCGGCACCAGGACGGGCTGCCCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp CACGGCGGAAGCCCCAGCGCTGCCGATCGTAGCTCTTCTTCTCCTTaGCCAGCAGCGTCTGCAGGTAGATCATGCGGAAGCGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: HGGSPSAADRSSSSP*PAASAGRSCGSAPG
Trigger: ACCAGGAGCGCTTCCGCATGATCTACCTGCAGACGCTGCTGGCCAAGGAGAAGAAGAGCTACGATCGGCAGCGCTGGGGCTTCCGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGGACACCTCTTTGTCGTaGACCTTCACCAGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: THCRGQATTRKAKPTVPRDTSLS*TFTRPR
Trigger: GCGCGGCCTGGTGAAGGTCAACGACAAAGAGGTGTC...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGGGCCAAGGGGGCCTGTaGCCGCCGTTGGCATTTATT +
Preference number: 5 (lower is better)
Translates to: THCRGQATTRKAKPTVPRGQGGL*PPLAFI
Trigger: AATAAATGCCAACGGCGGCAACAGGCCCCCTTGGCC...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp TCCCTTGTCCGCAGGCTTGCAGATGGGCTGACTTGGGGTGCCCTCTGGTGGCAACTTCTTGCGCTCCATTaGCATGGCCTGGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SLVRRLADGLTWGALWWQLLALH*HGLAAQ
Trigger: CTGGGCAGCCAGGCCATGCAAATGGAGCGCAAGAAG...TTGCCACCAGAGGGCACCCCAAGTCAGCCCATCTGCAAGCCTGCGGACAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGCTCTGCTGGGACTTCTaGCGCTCCATTTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: THCRGQATTRKAKPTVPRLCWDF*RSICMA
Trigger: GGCCATGCAAATGGAGCGCAAGAAGTCCCAGCAGAG...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 90 bp AGTAGGACCTGCGAGGCCAGGTTAGGCGTTTCTCCTGCTCTGAAGTaGTCTGGCTTCGCAGGAGAGGGCTCTTGCCCTCCCCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: SRTCEARLGVSPALK*SGFAGEGSCPPLPP
Trigger: TGGTGGAAGGGGAGGGCAAGAGCCCTCTCCTGCGAAGCCAGAGCACTTCAGAGCAGGAGAAACGCCTAACCTGGCCTCGCAGGTCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp TGCCCGGCGCTCTGCTGGGACTTCTTGCGCTCCATTTGCATGGCCTaGCTGCCCAGGGAACTGATTCGGTCGGACACCTCTTTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: CPALCWDFLRSICMA*LPRELIRSDTSLSL
Trigger: CAACGACAAAGAGGTGTCCGACCGAATCAGTTCCCTGGGCAGCCAGGCCATGCAAATGGAGCGCAAGAAGTCCCAGCAGAGCGCCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp GACCTGCGAGGCCAGGTTAGGCGTTTCTCCTGCTCTGAAGTGCTCTaGCTTCGCAGGAGAGGGCTCTTGCCCTCCCCTTCCACCATCATG +
Preference number: 5 (lower is better)
Translates to: DLRGQVRRFSCSEVL*LRRRGLLPSPSTIM
Trigger: CATGATGGTGGAAGGGGAGGGCAAGAGCCCTCTCCTGCGAAGCCAGAGCACTTCAGAGCAGGAGAAACGCCTAACCTGGCCTCGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp ACCCACTGCAGAGGCCAGGCTACCACCAGGAAAGCCAAGCCCACTGTGCCCAGGGGCACCAGAGGGATGTaGGGTAGTGCCTCCAATTCA +
Preference number: 5 (lower is better)
Translates to: THCRGQATTRKAKPTVPRGTRGM*GSASNS
Trigger: TGAATTGGAGGCACTACCCAACATCCCTCTGGTGCC...CCTGGGCACAGTGGGCTTGGCTTTCCTGGTGGTAGCCTGGCCTCTGCAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp GGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTCGGGCACACAGCTGTTaGTCAGCAGAGGTGATCCGG +
Preference number: 5 (lower is better)
Translates to: GLADTPGFSQAPWPFALGRAHSC*SAEVIR
Trigger: CCGGATCACCTCTGCTGACAAACAGCTGTGTGCCCG...ACCCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218465.2
CDS GCA 90 bp GGGGATTCAACTCTGCATCCTCATAGTCACCGTCAAGGCCGCAACTaGTTTCCGAGGAGCGCCCACGGTAATGGGGTCTGGGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GDSTLHPHSHRQGRN*FPRSAHGNGVWVLP
Trigger: GGGAAGCACCCAGACCCCATTACCGTGGGCGCTCCTCGGAAAGCAGTTGCGGCCTTGACGGTGACTATGAGGATGCAGAGTTGAATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp TTCTCATCTCCAGGCCCTTTTCCAGATCCAGCTCACTCACTTTGGTaGGATCCAGGGCGCCTGAGGCCAGGCTGCCTCTGCCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FSSPGPFPDPAHSLW*DPGRLRPGCLCLCC
Trigger: GCAGCAAAGGCAGAGGCAGCCTGGCCTCAGGCGCCCTGGATCCCACCAAAGTGAGTGAGCTGGATCTGGAAAAGGGCCTGGAGATGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCCGCAGGAGAGGGCTCTaGCCCTCCCCTTCCACCATC +
Preference number: 5 (lower is better)
Translates to: LGRWPRASEWLNYTAGRVRRRGL*PSPSTI
Trigger: GATGGTGGAAGGGGAGGGCAAGAGCCCTCTCCTGCG...GACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp TGGGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGGGTTAGCAGGGAGCTaGCTTTCCTTCTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: WGLQTHLDSRRPLGLSLWGLAGS*LSFSEG
Trigger: GCCCTCAGAGAAGGAAAGCAAGCTCCCTGCTAACCC...CCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218465.2
CDS CCA 90 bp ACTTTCTCATCTCCAGGCCCTTTTCCAGATCCAGCTCACTCACTTTaGTGGGATCCAGGGCGCCTGAGGCCAGGCTGCCTCTGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: TFSSPGPFPDPAHSL*WDPGRLRPGCLCLC
Trigger: GCAAAGGCAGAGGCAGCCTGGCCTCAGGCGCCCTGGATCCCACCAAAGTGAGTGAGCTGGATCTGGAAAAGGGCCTGGAGATGAGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp AGAAAATGGTCTCAATCTGCTGGCTGGTCAGCACAGGCTGAGAGGTaGTGGCAGCGGCTTTCAGAGGCTTCATGGGCAGCAGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RKWSQSAGWSAQAER*WQRLSEASWAAAGP
Trigger: AGGCCCTGCTGCTGCCCATGAAGCCTCTGAAAGCCGCTGCCACCACCTCTCAGCCTGTGCTGACCAGCCAGCAGATTGAGACCATTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp GAGAGATTCGGAGGGCGTCTTGCAGCAGGGAATGGTCGGGATGGCTaGACGGGGTGTGTTTTAGCAAGTCGTGAAGGACTAGCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: ERFGGRLAAGNGRDG*TGCVLASREGLACS
Trigger: GGAGCACGCTAGTCCTTCACGACTTGCTAAAACACACCCCGTCCAGCCATCCCGACCATTCCCTGCTGCAAGACGCCCTCCGAATCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGGATGCTCTGGTAGGGTaGGTACTCCAGGGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILDALVG*VLQGRP
Trigger: TGGCCGCCCCTGGAGTACCAACCCTACCAGAGCATC...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp GCAGGAGTCCTCACGGGACAGGCAGTCTACACCCCTAAAATTATGCCTTCCTGCGAGGTGAGGTTCTCGTaGGAGCTGCAGTCCGGCGTG +
Preference number: 5 (lower is better)
Translates to: AGVLTGQAVYTPKIMPSCEVRFS*ELQSGV
Trigger: CACGCCGGACTGCAGCTCCAACGAGAACCTCACCTC...GCAGGAAGGCATAATTTTAGGGGTGTAGACTGCCTGTCCCGTGAGGACTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 90 bp GTTTCTCCTGCTCTGAAGTGCTCTGGCTTCGCAGGAGAGGGCTCTTaGCCTCCCCTTCCACCATCATGCCTCCGACATAGATGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: VSPALKCSGFAGEGS*PPLPPSCLRHRCSG
Trigger: ACCAGAGCATCTATGTCGGAGGCATGATGGTGGAAGGGGAGGGCAAGAGCCCTCTCCTGCGAAGCCAGAGCACTTCAGAGCAGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 90 bp ACGCGGAAGGCCATGCTGGGAGACATTAACAGCAGCAGTGACTCCTaGTCTGACAGCTTCTTCCTCAGCCTCTCCATGACCTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TRKAMLGDINSSSDS*SDSFFLSLSMTLLP
Trigger: GGGCAGCAAGGTCATGGAGAGGCTGAGGAAGAAGCTGTCAGAGCAGGAGTCACTGCTGCTGTTAATGTCTCCCAGCATGGCCTTCCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp TCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCGGATCTTCTCGAAGTaGGATCTGAGCGCCGCCACG +
Preference number: 5 (lower is better)
Translates to: SWQMAQSFGMAKLHRRKGRIFSK*DLSAAT
Trigger: CGTGGCGGCGCTCAGATCCAACTTCGAGAAGATCCG...ACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGCGGTCGGACACCTCTTaGTCGTTGACCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILRSDTS*SLTFTR
Trigger: CCTGGTGAAGGTCAACGACAAAGAGGTGTCCGACCG...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp AGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGAGTCCTTGACATCCTaGTTGCTTCTGGCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: RKGLIPTLWAGSLVPVFQESLTS*LLLARR
Trigger: CCTGCGAGCCAGAAGCAACAAGGATGTCAAGGACTC...CTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp GCAGGAGTCCTCACGGGACAGGCAGTCTACACCCCTAAAATTATGCCTTCCTGCGGGTTAGCAGGGAGCTaGCTTTCCTTCTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: AGVLTGQAVYTPKIMPSCGLAGS*LSFSEG
Trigger: GCCCTCAGAGAAGGAAAGCAAGCTCCCTGCTAACCC...GCAGGAAGGCATAATTTTAGGGGTGTAGACTGCCTGTCCCGTGAGGACTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 90 bp GGAACGTGTAACTCTTGCCGTTGCGACTGTGAACGCGGAAGGCCATaGTGGGAGACATTAACAGCAGCAGTGACTCCTGCTCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GTCNSCRCDCERGRP*WETLTAAVTPALTA
Trigger: AGCTGTCAGAGCAGGAGTCACTGCTGCTGTTAATGTCTCCCAGCATGGCCTTCCGCGTTCACAGTCGCAACGGCAAGAGTTACACGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGGATTCGGAGGGCGTCTaGCAGCAGGGAATGGTCGGG +
Preference number: 5 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWDSEGV*QQGMVG
Trigger: CCCGACCATTCCCTGCTGCAAGACGCCCTCCGAATC...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp AGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGTCCAGTTTGGCTCAGTaGTGTCCCTGTAGACTCGAG +
Preference number: 5 (lower is better)
Translates to: RKGLIPTLWAGSLVPVFQSSLAQ*CPCRLE
Trigger: CTCGAGTCTACAGGGACACAACTGAGCCAAACTGGA...CTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 90 bp TGTCCTGTAGGGTTTGGGGGTCCAGCTGGACCTGGCCTTTCCCCATaGGCTTGTCTGCGCTCTCACCATCTTCCTTCGTCATCTTCATTT +
Preference number: 5 (lower is better)
Translates to: CPVGFGGPAGPGLSP*ACLRSHHLPSSSSF
Trigger: AAATGAAGATGACGAAGGAAGATGGTGAGAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGCTGGACCCCCAAACCCTACAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp CTGCAAACTGAGCGTTGGCCTGACAGCACTTCTCTGCAGTTTCCATaGCCACTCCGTAGTTATCCACAAAGGCTCGGTACACACCCAGCT +
Preference number: 5 (lower is better)
Translates to: LQTERWPDSTSLQFP*PLRSYPQRLGTHPA
Trigger: AGCTGGGTGTGTACCGAGCCTTTGTGGATAACTACGGAGTGGCCATGGAAACTGCAGAGAAGTGCTGTCAGGCCAACGCTCAGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp ACGTGTAACTCTTGCCGTTGCGACTGTGAACGCGGAAGGCCATGCTaGGAGACATTAACAGCAGCAGTGACTCCTGCTCTGACAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TCNSCRCDCERGRPC*ETLTAAVTPALTAS
Trigger: AGAAGCTGTCAGAGCAGGAGTCACTGCTGCTGTTAATGTCTCCCAGCATGGCCTTCCGCGTTCACAGTCGCAACGGCAAGAGTTACACGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp GGGCTTGCAGACACACCTGGATTCTCGCAGGCCCCTTGGCCTTTCGCTTTGGGTCCATTTACAGTCATATaGCTGGGTTTTGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: GLADTPGFSQAPWPFALGPFTVI*LGFAST
Trigger: AGTGGAGGCAAAACCCAGCAATATGACTGTAAATGG...ACCCAAAGCGAAAGGCCAAGGGGCCTGCGAGAATCCAGGTGTGTCTGCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGAGCCTCTCCATGACCTaGCTGCCCTTATTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILSLSMT*LPLFAL
Trigger: GAGAGCAAATAAGGGCAGCAAGGTCATGGAGAGGCT...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp AGGGAACACTCTACTCTTTCTCTTGTGGAACCTCCGTTCTGGACCTaGCCTTTCCCCATGAGCTTGTCTGCGCTCTCACCATCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: REHSTLSLVEPPFWT*PFPMSLSALSPSSF
Trigger: GAAGGAAGATGGTGAGAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAAGAGAAAGAGTAGAGTGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR CAA 90 bp ACCGCAGGAAGGGTCTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTTGGTAGTTGAGTCCTaGACATCCTTGTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TAGRVSFPLCGRVLSSQFLVVES*TSLLLL
Trigger: CAGAAGCAACAAGGATGTCAAGGACTCAACTACCAA...AAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAGACCCTTCCTGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp AGAAAGAGGGAACACTCTACTCTTTCTCTTGTGGAACCTCCGTTCTaGACCTGGCCTTTCCCCATGAGCTTGTCTGCGCTCTCACCATCT +
Preference number: 5 (lower is better)
Translates to: RKREHSTLSLVEPPF*TWPFPMSLSALSPS
Trigger: AGATGGTGAGAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAAGAGAAAGAGTAGAGTGTTCCCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR CAA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGTTGGCATTTATTAGGTaGTCCTTCAGGAAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILLAFIR*SFRKRG
Trigger: TCCCCGCTTCCTGAAGGACAACCTAATAAATGCCAA...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCGCAGGAAGGGTCTGCTCTCTTCTCTCGTaGGATGTCGCTCTTGATTTG +
Preference number: 5 (lower is better)
Translates to: LGRWPRASEWLNYTAGRVCSLLS*DVALDL
Trigger: CAAATCAAGAGCGACATCCAACGAGAGAAGAGAGCA...GACCCTTCCTGCGGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 90 bp CTCTTTCTCTTGTGGAACCTCCGTTCTGGACCTGGCCTTTCCCCATaGGCTTGTCTGCGCTCTCACCATCTTCCTTCGTCATCTTCATTT +
Preference number: 5 (lower is better)
Translates to: LFLLWNLRSGPGLSP*ACLRSHHLPSSSSF
Trigger: AAATGAAGATGACGAAGGAAGATGGTGAGAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAAGAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS GCA 90 bp CTCAGAGATTTCTGCAAACTGAGCGTTGGCCTGACAGCACTTCTCTaGAGTTTCCATGGCCACTCCGTAGTTATCCACAAAGGCTCGGTA +
Preference number: 5 (lower is better)
Translates to: LRDFCKLSVGLTALL*SFHGHSVVIHKGSV
Trigger: TACCGAGCCTTTGTGGATAACTACGGAGTGGCCATGGAAACTGCAGAGAAGTGCTGTCAGGCCAACGCTCAGTTTGCAGAAATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp GGCACCAGAGGGATGTTGGGTAGTGCCTCCAATTCATCCACCATCTaGAAGCTGAGGTCCGTGAGCGGAATGTACCATTTACAGTCATAT +
Preference number: 5 (lower is better)
Translates to: GTRGMLGSASNSSTI*KLRSVSGMYHLQSY
Trigger: ATATGACTGTAAATGGTACATTCCGCTCACGGACCTCAGCTTCCAGATGGTGGATGAATTGGAGGCACTACCCAACATCCCTCTGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGTCGTCATCTTCTTTGTaGATGGTCAGTGGAATGTGG +
Preference number: 5 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILSSSSL*MVSGMW
Trigger: CCACATTCCACTGACCATCAACAAAGAAGATGACGA...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp AACTGCACGAGGGCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTTGTCACTCCAGTTTGGCTCAGTaGTGTCCCTGTAGACTCGAG +
Preference number: 5 (lower is better)
Translates to: NCTRAHSLLAGDSLNSCHSSLAQ*CPCRLE
Trigger: CTCGAGTCTACAGGGACACAACTGAGCCAAACTGGA...GTGACAACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGCCCTCGTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR CAA 90 bp AGTATCAGAGAACAGGAGCCTGACCTGCTTCTGCACATACATCCATCCTTCTGGACTCCTCATTCCAGTTaGGCTCAGTTGTGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SIREQEPDLLLHIHPSFWTPHSS*AQLCPC
Trigger: ACAGGGACACAACTGAGCCAAACTGGAATGAGGAGT...CCAGAAGGATGGATGTATGTGCAGAAGCAGGTCAGGCTCCTGTTCTCTGATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp TGTACGAACTGCACGAGGGCTCATAGTCTTCTTGCTGGTGACTCTCTGAACAGTACTCCTCATTCCAGTTaGGCTCAGTTGTGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: CTNCTRAHSLLAGDSLNSTPHSS*AQLCPC
Trigger: ACAGGGACACAACTGAGCCAAACTGGAATGAGGAGT...ACTGTTCAGAGAGTCACCAGCAAGAAGACTATGAGCCCTCGTGCAGTTCGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS-3UTR CAA 90 bp TCCCATATTTCTGATGCTCTGGAGGGAGGCATCAGAAACGACTCCAAACAAAAGTCCTTGACATCCTTGTaGCTTCTGGCTCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SHISDALEGGIRNDSKQKSLTSL*LLARRF
Trigger: GAACCTGCGAGCCAGAAGCAACAAGGATGTCAAGGA...CTTTTGTTTGGAGTCGTTTCTGATGCCTCCCTCCAGAGCATCAGAAATATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp TTTGGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACGGTTTTGCCTCCACTTaGCTTCTTCAGCTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: FGYLSLGRWPRASEWLNYGFAST*LLQLGA
Trigger: TGCACCAAGCTGAAGAAGCAAAGTGGAGGCAAAACC...GTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp GGGTACTTGTCTCTTGGCAGATGGCCCAGAGCTTCGGAATGGCTAAATTACACCTCATATTGCTGGGTTTaGCCTCCACTTTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GYLSLGRWPRASEWLNYTSYCWV*PPLCFF
Trigger: GAAGAAGCAAAGTGGAGGCAAAACCCAGCAATATGA...GGTGTAATTTAGCCATTCCGAAGCTCTGGGCCATCTGCCAAGAGACAAGTACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CTCATTCCCACTCTGTGGGCGGGTTCTCTCGTCCCAGTTTTCCAGGTCATTCTGGATGTCGCTCTTGATTaGGGAGATTTTGATCTTCAA +
Preference number: 5 (lower is better)
Translates to: LIPTLWAGSLVPVFQVILDVALD*GDFDLQ
Trigger: TTGAAGATCAAAATCTCCCAAATCAAGAGCGACATC...CAGAATGACCTGGAAAACTGGGACGAGAGAACCCGCCCACAGAGTGGGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 90 bp GTCCACAGGTTTGTAGAGCAGAGTTTCCAAAGAGTTCTTGGTAGTTaGGTCCTTGACATCCTTGTTGCTTCTGGCTCGCAGGTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: VHRFVEQSFQRVLGS*VLDILVASGSQVLR
Trigger: TCTGAGAACCTGCGAGCCAGAAGCAACAAGGATGTCAAGGACTCAACTACCAAGAACTCTTTGGAAACTCTGCTCTACAAACCTGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 90 bp CATGCAGGAAGCCGTAGAGTCCAGGAGACTCGTCATCTTCTTTGTTaGTGGTCAGTGGAATGTGGTGAACCGTCTGAAGTTTTACACATG +
Preference number: 5 (lower is better)
Translates to: HAGSRRVQETRHLLC*WSVECGEPSEVLHM
Trigger: CATGTGTAAAACTTCAGACGGTTCACCACATTCCACTGACCATCAACAAAGAAGATGACGAGTCTCCTGGACTCTACGGCTTCCTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 90 bp CTGCCCTTATTTGCTCTCTTCTCTCGTTGGATGTCGCTCTTGATTTaGGAGATTTTGATCTTCAAGGCATCCAGTTCCTCATCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LPLFALFSRWMSLLI*EILIFKASSSSSGT
Trigger: GGTGCCAGATGAGGAACTGGATGCCTTGAAGATCAAAATCTCCCAAATCAAGAGCGACATCCAACGAGAGAAGAGAGCAAATAAGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS-3UTR CAA 90 bp CAAAAGCTATTTCGGATCAAAGTATTAAAACAAGCCACTAGAGGAAACTGCTGTTTGATTTGGGAGATTTaGATCTTCAAGGCATCCAGT +
Preference number: 5 (lower is better)
Translates to: QKLFRIKVLKQATRGNCCLIWEI*IFKASS
Trigger: ACTGGATGCCTTGAAGATCAAAATCTCCCAAATCAA...ACAGCAGTTTCCTCTAGTGGCTTGTTTTAATACTTTGATCCGAAATAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp CGCAGCTCCATGCGCGGCGGCTCCGAGTCCGGGAACTaGGCCCTCCACGCCTCGGCGAAGCCCACCGAGTCC +
Preference number: 6 (lower is better)
Translates to: RSSMRGGSESGN*ALHASAKPTES
Trigger: GGACTCGGTGGGCTTCGCCGAGGCGTGGAGGGCGCAGTTCCCGGACTCGGAGCCGCCGCGCATGGAGCTGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp GGTCGTCCCGGTCCGCCGATGCAGCAGCCGCTGGCCTaGGGGCGGACGCTGACCGCCCCTTACTCGGTGACC +
Preference number: 6 (lower is better)
Translates to: GRPGPPMQQPLA*GRTLTAPYSVT
Trigger: GGTCACCGAGTAAGGGGCGGTCAGCGTCCGCCCGCAGGCCAGCGGCTGCTGCATCGGCGGACCGGGACGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp GGTCTGGGTGCTTCCCCCAGGCCCTGCCCGGCGCTCTaGTGGGACTTCTTGCGCTCCATTTGCATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GLGASPRPCPAL*WDFLRSICMAW
Trigger: CCAGGCCATGCAAATGGAGCGCAAGAAGTCCCAGCAGAGCGCCGGGCAGGGCCTGGGGGAAGCACCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp GGCAGCCCGTCCTGGTGCCGGCGCTGTTCCTCAGCCTaGTCTGCGGCACAGCCATATCCAGGTGGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: GSPSWCRRCSSA*SAAQPYPGGVP
Trigger: TGGAACACCACCTGGATATGGCTGTGCCGCAGACCAGGCTGAGGAACAGCGCCGGCACCAGGACGGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp TTCTCGGCGTCGGCAGAGCCGGGCTGGGCAGGTCCCTaGCGGATCTTCTCGAAGTTGGATCTGAGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: FSASAEPGWAGP*RIFSKLDLSAA
Trigger: GGCGGCGCTCAGATCCAACTTCGAGAAGATCCGCAAGGGACCTGCCCAGCCCGGCTCTGCCGACGCCGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp TGGCTGGCCAGCTTCTGGAAGAGGTCCCCTACACGCTaGTGGTGGCTCCACTGCTGCACTCGGGGGAACAGC +
Preference number: 6 (lower is better)
Translates to: WLASFWKRSPTR*WWLHCCTRGNS
Trigger: GCTGTTCCCCCGAGTGCAGCAGTGGAGCCACCAGCAGCGTGTAGGGGACCTCTTCCAGAAGCTGGCCAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp CTGGCCAGCTTCTGGAAGAGGTCCCCTACACGCTGCTaGTGGCTCCACTGCTGCACTCGGGGGAACAGCCCA +
Preference number: 6 (lower is better)
Translates to: LASFWKRSPTRC*WLHCCTRGNSP
Trigger: TGGGCTGTTCCCCCGAGTGCAGCAGTGGAGCCACCAGCAGCGTGTAGGGGACCTCTTCCAGAAGCTGGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 90 bp AAGCGCTCCTGGTTCACCTCCTGCTCCAAGCGCCTAATGGAGGCCTaGCAGCGCTCCAGCTCCTGCTCGATGTCACCCACCGAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: KRSWFTSCSKRLMEA*QRSSSCSMSPTERS
Trigger: GCTGCGCTCGGTGGGTGACATCGAGCAGGAGCTGGAGCGCTGCAAGGCCTCCATTAGGCGCTTGGAGCAGGAGGTGAACCAGGAGCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp TGCCCGGCGCTCTGCTGGGACTTCTTGCGCTCCATTTaGATGGCCTGGCTGCCCAGGGAACTGATTCGGTCG +
Preference number: 6 (lower is better)
Translates to: CPALCWDFLRSI*MAWLPRELIRS
Trigger: CGACCGAATCAGTTCCCTGGGCAGCCAGGCCATGCAAATGGAGCGCAAGAAGTCCCAGCAGAGCGCCGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp CCCGTCCTGGTGCCGGCGCTGTTCCTCAGCCTGGTCTaGGGCACAGCCATATCCAGGTGGTGTTCCAAACGA +
Preference number: 6 (lower is better)
Translates to: PVLVPALFLSLV*GTAISRWCSKR
Trigger: TCGTTTGGAACACCACCTGGATATGGCTGTGCCGCAGACCAGGCTGAGGAACAGCGCCGGCACCAGGACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp CTGCCCGGCGCTCTGCTGGGACTTCTTGCGCTCCATTaGCATGGCCTGGCTGCCCAGGGAACTGATTCGGTC +
Preference number: 6 (lower is better)
Translates to: LPGALLGLLALH*HGLAAQGTDSV
Trigger: GACCGAATCAGTTCCCTGGGCAGCCAGGCCATGCAAATGGAGCGCAAGAAGTCCCAGCAGAGCGCCGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 90 bp TGCATGGCCTGGCTGCCCAGGGAACTGATTCGGTCGGACACCTCTTaGTCGTTGACCTTCACCAGGCCGCGCTCGTGGTGGAACTCGACG +
Preference number: 6 (lower is better)
Translates to: CMAWLPRELIRSDTS*SLTFTRPRSWWNST
Trigger: CGTCGAGTTCCACCACGAGCGCGGCCTGGTGAAGGTCAACGACAAAGAGGTGTCCGACCGAATCAGTTCCCTGGGCAGCCAGGCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp TCGAGCCTCGGGCACACAGCTGTTTGTCAGCAGAGGTaGTCCGGCTCCGGCTTCCCCGGCTGGGGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: SSLGHTAVCQQR*SGSGFPGWGRK
Trigger: TTTTCTACCCCAGCCGGGGAAGCCGGAGCCGGATCACCTCTGCTGACAAACAGCTGTGTGCCCGAGGCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218465.2
CDS TCA 72 bp GGGTCCAGCTTGCCCCTGCACACCAGACATCGGATATaGGTCCACAGGGTCGAGCCTCGGGCACACAGCTGT +
Preference number: 6 (lower is better)
Translates to: GSSLPLHTRHRI*VHRVEPRAHSC
Trigger: ACAGCTGTGTGCCCGAGGCTCGACCCTGTGGACTCATATCCGATGTCTGGTGTGCAGGGGCAAGCTGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218465.2
CDS GCA 72 bp TGCGAGGCCAGGTTAGGCGTTTCTCCTGCTCTGAAGTaGTCTGGCTTCGCAGGAGAGGGCTCTTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CEARLGVSPALK*SGFAGEGSCPP
Trigger: GGGAGGGCAAGAGCCCTCTCCTGCGAAGCCAGAGCACTTCAGAGCAGGAGAAACGCCTAACCTGGCCTCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp GGCCAGGTTAGGCGTTTCTCCTGCTCTGAAGTGCTCTaGCTTCGCAGGAGAGGGCTCTTGCCCTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GQVRRFSCSEVL*LRRRGLLPSPS
Trigger: GGAAGGGGAGGGCAAGAGCCCTCTCCTGCGAAGCCAGAGCACTTCAGAGCAGGAGAAACGCCTAACCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp TGGTTCACCTCCTGCTCCAAGCGCCTAATGGAGGCCTaGCAGCGCTCCAGCTCCTGCTCGATGTCACCCACC +
Preference number: 6 (lower is better)
Translates to: WFTSCSKRLMEA*QRSSSCSMSPT
Trigger: GGTGGGTGACATCGAGCAGGAGCTGGAGCGCTGCAAGGCCTCCATTAGGCGCTTGGAGCAGGAGGTGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp CACCATCATGCCTCCGACATAGATGCTCTGGTAGGGTaGGTACTCCAGGGGCGGCCAAGGGGGCCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: HHHASDIDALVG*VLQGRPRGPVA
Trigger: GGCAACAGGCCCCCTTGGCCGCCCCTGGAGTACCAACCCTACCAGAGCATCTATGTCGGAGGCATGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp TGGACTGGCCAGAGGAAAAGTCCTCCTCGCTGGAGGTaGGGTTCTCGTTGGAGCTGCAGTCCGGCGTGTAGC +
Preference number: 6 (lower is better)
Translates to: WTGQRKSPPRWR*GSRWSCSPACS
Trigger: GCTACACGCCGGACTGCAGCTCCAACGAGAACCTCACCTCCAGCGAGGAGGACTTTTCCTCTGGCCAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp TGCCCTCCCCTTCCACCATCATGCCTCCGACATAGATaGTCTGGTAGGGTTGGTACTCCAGGGGCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: CPPLPPSCLRHR*SGRVGTPGAAK
Trigger: CTTGGCCGCCCCTGGAGTACCAACCCTACCAGAGCATCTATGTCGGAGGCATGATGGTGGAAGGGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp AGCCCCAGCGCTGCCGATCGTAGCTCTTCTTCTCCTTaGCCAGCAGCGTCTGCAGGTAGATCATGCGGAAGC +
Preference number: 6 (lower is better)
Translates to: SPSAADRSSSSP*PAASAGRSCGS
Trigger: GCTTCCGCATGATCTACCTGCAGACGCTGCTGGCCAAGGAGAAGAAGAGCTACGATCGGCAGCGCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp TCTGCCTTTGCTGCTGAGGTGTGGCGAGGAAGAAGGTaGATCATCGATGTAGGGCAGCCCGTCCTGGTGCCG +
Preference number: 6 (lower is better)
Translates to: SAFAAEVWRGRR*IIDVGQPVLVP
Trigger: CGGCACCAGGACGGGCTGCCCTACATCGATGATTCACCTTCTTCCTCGCCACACCTCAGCAGCAAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp TCGGGATGGCTGGACGGGGTGTGTTTTAGCAAGTCGTaGAGGACTAGCGTGCTCCTCGTCACCCGGTCCACA +
Preference number: 6 (lower is better)
Translates to: SGWLDGVCFSKS*RTSVLLVTRST
Trigger: TGTGGACCGGGTGACGAGGAGCACGCTAGTCCTTCACGACTTGCTAAAACACACCCCGTCCAGCCATCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp TCTTCTCCTTGGCCAGCAGCGTCTGCAGGTAGATCATaGGGAAGCGCTCCTGGTTCACCTCCTGCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: SSPWPAASAGRS*GSAPGSPPAPS
Trigger: GCTTGGAGCAGGAGGTGAACCAGGAGCGCTTCCGCATGATCTACCTGCAGACGCTGCTGGCCAAGGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp ACTCTGCATCCTCATAGTCACCGTCAAGGCCGCAACTaGTTTCCGAGGAGCGCCCACGGTAATGGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: TLHPHSHRQGRN*FPRSAHGNGVW
Trigger: CCAGACCCCATTACCGTGGGCGCTCCTCGGAAAGCAGTTGCGGCCTTGACGGTGACTATGAGGATGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp AGGGTTGGTACTCCAGGGGCGGCCAAGGGGGCCTGTTaGCGCCGTTGGCATTTATTAGGTTGTCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: RVGTPGAAKGAC*RRWHLLGCPSG
Trigger: TCCTGAAGGACAACCTAATAAATGCCAACGGCGGCAACAGGCCCCCTTGGCCGCCCCTGGAGTACCAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp GCTCTGAAGTGCTCTGGCTTCGCAGGAGAGGGCTCTTaGCCTCCCCTTCCACCATCATGCCTCCGACATAGA +
Preference number: 6 (lower is better)
Translates to: ALKCSGFAGEGS*PPLPPSCLRHR
Trigger: TCTATGTCGGAGGCATGATGGTGGAAGGGGAGGGCAAGAGCCCTCTCCTGCGAAGCCAGAGCACTTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 90 bp CACTTTCTCATCTCCAGGCCCTTTTCCAGATCCAGCTCACTCACTTaGGTGGGATCCAGGGCGCCTGAGGCCAGGCTGCCTCTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: HFLISRPFSRSSSLT*VGSRAPEARLPLPL
Trigger: CAAAGGCAGAGGCAGCCTGGCCTCAGGCGCCCTGGATCCCACCAAAGTGAGTGAGCTGGATCTGGAAAAGGGCCTGGAGATGAGAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp GCAGGGCCTCCAGATGGCTCAGGTACGTCTCCTCGCTaGCCAGGATTCCGGACAAAACCCACTTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: AGPPDGSGTSPR*PGFRTKPTFSS
Trigger: AGATGAGAAAGTGGGTTTTGTCCGGAATCCTGGCCAGCGAGGAGACGTACCTGAGCCATCTGGAGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp TCTTGCCGTTGCGACTGTGAACGCGGAAGGCCATGCTaGGAGACATTAACAGCAGCAGTGACTCCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: SCRCDCERGRPC*ETLTAAVTPAL
Trigger: CAGAGCAGGAGTCACTGCTGCTGTTAATGTCTCCCAGCATGGCCTTCCGCGTTCACAGTCGCAACGGCAAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp TTGTGGAACCTCCGTTCTGGACCTGGCCTTTCCCCATaGGCTTGTCTGCGCTCTCACCATCTTCCTTCGTCA +
Preference number: 6 (lower is better)
Translates to: LWNLRSGPGLSP*ACLRSHHLPSS
Trigger: TGACGAAGGAAGATGGTGAGAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS GCA 72 bp ACGGGGTGTGTTTTAGCAAGTCGTGAAGGACTAGCGTaGTCCTCGTCACCCGGTCCACAGGTTTGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: TGCVLASREGLA*SSSPGPQVCRA
Trigger: TGCTCTACAAACCTGTGGACCGGGTGACGAGGAGCACGCTAGTCCTTCACGACTTGCTAAAACACACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp AACTCTTGCCGTTGCGACTGTGAACGCGGAAGGCCATaGTGGGAGACATTAACAGCAGCAGTGACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: NSCRCDCERGRP*WETLTAAVTPA
Trigger: AGCAGGAGTCACTGCTGCTGTTAATGTCTCCCAGCATGGCCTTCCGCGTTCACAGTCGCAACGGCAAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp CAAGGGGGCCTGTTGCCGCCGTTGGCATTTATTAGGTaGTCCTTCAGGAAGCGGGGATTCAACTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: QGGLLPPLAFIR*SFRKRGFNSAS
Trigger: GGATGCAGAGTTGAATCCCCGCTTCCTGAAGGACAACCTAATAAATGCCAACGGCGGCAACAGGCCCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp GAGCGTTGGCCTGACAGCACTTCTCTGCAGTTTCCATaGCCACTCCGTAGTTATCCACAAAGGCTCGGTACA +
Preference number: 6 (lower is better)
Translates to: ERWPDSTSLQFP*PLRSYPQRLGT
Trigger: TGTACCGAGCCTTTGTGGATAACTACGGAGTGGCCATGGAAACTGCAGAGAAGTGCTGTCAGGCCAACGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp AGGCATCCAGTTCCTCATCTGGCACCAGAGGGATGTTaGGTAGTGCCTCCAATTCATCCACCATCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: RHPVPHLAPEGC*VVPPIHPPSGS
Trigger: GCTTCCAGATGGTGGATGAATTGGAGGCACTACCCAACATCCCTCTGGTGCCAGATGAGGAACTGGATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp TCTACTCTTTCTCTTGTGGAACCTCCGTTCTGGACCTaGCCTTTCCCCATGAGCTTGTCTGCGCTCTCACCA +
Preference number: 6 (lower is better)
Translates to: STLSLVEPPFWT*PFPMSLSALSP
Trigger: TGGTGAGAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAAGAGAAAGAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS CCA 72 bp GAACACTCTACTCTTTCTCTTGTGGAACCTCCGTTCTaGACCTGGCCTTTCCCCATGAGCTTGTCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: EHSTLSLVEPPF*TWPFPMSLSAL
Trigger: GAGCGCAGACAAGCTCATGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAAGAGAAAGAGTAGAGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS CCA 72 bp CTCGCAGGTTCTCAGAGATTTCTGCAAACTGAGCGTTaGCCTGACAGCACTTCTCTGCAGTTTCCATGGCCA +
Preference number: 6 (lower is better)
Translates to: LAGSQRFLQTER*PDSTSLQFPWP
Trigger: TGGCCATGGAAACTGCAGAGAAGTGCTGTCAGGCCAACGCTCAGTTTGCAGAAATCTCTGAGAACCTGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp AAGGCATCCAGTTCCTCATCTGGCACCAGAGGGATGTaGGGTAGTGCCTCCAATTCATCCACCATCTGGAAG +
Preference number: 6 (lower is better)
Translates to: KASSSSSGTRGM*GSASNSSTIWK
Trigger: CTTCCAGATGGTGGATGAATTGGAGGCACTACCCAACATCCCTCTGGTGCCAGATGAGGAACTGGATGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp CTGGGTTCAGAAAGAGGGAACACTCTACTCTTTCTCTaGTGGAACCTCCGTTCTGGACCTGGCCTTTCCCCA +
Preference number: 6 (lower is better)
Translates to: LGSERGNTLLFL*WNLRSGPGLSP
Trigger: TGGGGAAAGGCCAGGTCCAGAACGGAGGTTCCACAAGAGAAAGAGTAGAGTGTTCCCTCTTTCTGAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS CAA 90 bp TTGATCTTCAAGGCATCCAGTTCCTCATCTGGCACCAGAGGGATGTaGGGTAGTGCCTCCAATTCATCCACCATCTGGAAGCTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: LIFKASSSSSGTRGM*GSASNSSTIWKLRS
Trigger: GGACCTCAGCTTCCAGATGGTGGATGAATTGGAGGCACTACCCAACATCCCTCTGGTGCCAGATGAGGAACTGGATGCCTTGAAGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp GGGATGTTGGGTAGTGCCTCCAATTCATCCACCATCTaGAAGCTGAGGTCCGTGAGCGGAATGTACCATTTA +
Preference number: 6 (lower is better)
Translates to: GMLGSASNSSTI*KLRSVSGMYHL
Trigger: TAAATGGTACATTCCGCTCACGGACCTCAGCTTCCAGATGGTGGATGAATTGGAGGCACTACCCAACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp AGCCGTAGAGTCCAGGAGACTCGTCATCTTCTTTGTTaGTGGTCAGTGGAATGTGGTGAACCGTCTGAAGTT +
Preference number: 6 (lower is better)
Translates to: SRRVQETRHLLC*WSVECGEPSEV
Trigger: AACTTCAGACGGTTCACCACATTCCACTGACCATCAACAAAGAAGATGACGAGTCTCCTGGACTCTACGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp CCATTTACAGTCATATTGCTGGGTTTTGCCTCCACTTaGCTTCTTCAGCTTGGTGCAGAGGAGCAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: PFTVILLGFAST*LLQLGAEEQVS
Trigger: ACTGACCTGCTCCTCTGCACCAAGCTGAAGAAGCAAAGTGGAGGCAAAACCCAGCAATATGACTGTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 90 bp GCTGCCCTTATTTGCTCTCTTCTCTCGTTGGATGTCGCTCTTGATTaGGGAGATTTTGATCTTCAAGGCATCCAGTTCCTCATCTGGCAC +
Preference number: 6 (lower is better)
Translates to: AALICSLLSLDVALD*GDFDLQGIQFLIWH
Trigger: GTGCCAGATGAGGAACTGGATGCCTTGAAGATCAAAATCTCCCAAATCAAGAGCGACATCCAACGAGAGAAGAGAGCAAATAAGGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS GCA 72 bp ACAGATGTCAGAGAGAAACTTTTGAAACATTTCTTCTaGTGCTCTCGGATGCTTTCTCTCCACTCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: TDVREKLLKHFF*CSRMLSLHSAR
Trigger: GCGAGCCGAGTGGAGAGAAAGCATCCGAGAGCAGCAGAAGAAATGTTTCAAAAGTTTCTCTCTGACATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp TCACATCCCTTTCTGGCGTGTGGATTTAACGTGTCCTaGGTTCAGAAAGAGGGAACACTCTACTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SHPFLACGFNVS*VQKEGTLYSFS
Trigger: AGAGAAAGAGTAGAGTGTTCCCTCTTTCTGAACCCAGGACACGTTAAATCCACACGCCAGAAAGGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218591.2
CDS CAA 72 bp AGCAGAGTTTCCAAAGAGTTCTTGGTAGTTGAGTCCTaGACATCCTTGTTGCTTCTGGCTCGCAGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SRVSKEFLVVES*TSLLLLARRFS
Trigger: TGAGAACCTGCGAGCCAGAAGCAACAAGGATGTCAAGGACTCAACTACCAAGAACTCTTTGGAAACTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp AGCCTTCTAGCTCTATCTCAAACTCCTCATTCCAGTTaGGCTCAGTTGTGTCCCTGTAGACTCGAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SLLALSQTPHSS*AQLCPCRLESL
Trigger: CAAAGACTCGAGTCTACAGGGACACAACTGAGCCAAACTGGAATGAGGAGTTTGAGATAGAGCTAGAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164107.3
ENSMUST00000218591.2
CDS CAA 90 bp ACCTTGCTGCCCTTATTTGCTCTCTTCTCTCGTTGGATGTCGCTCTaGATTTGGGAGATTTTGATCTTCAAGGCATCCAGTTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: TLLPLFALFSRWMSL*IWEILIFKASSSSS
Trigger: AGATGAGGAACTGGATGCCTTGAAGATCAAAATCTCCCAAATCAAGAGCGACATCCAACGAGAGAAGAGAGCAAATAAGGGCAGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS TCA 72 bp TTTGTAGAGCAGAGTTTCCAAAGAGTTCTTGGTAGTTaGGTCCTTGACATCCTTGTTGCTTCTGGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: FVEQSFQRVLGS*VLDILVASGSQ
Trigger: CTGCGAGCCAGAAGCAACAAGGATGTCAAGGACTCAACTACCAAGAACTCTTTGGAAACTCTGCTCTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp AAAGAGTTCTTGGTAGTTGAGTCCTTGACATCCTTGTaGCTTCTGGCTCGCAGGTTCTCAGAGATTTCTGCA +
Preference number: 6 (lower is better)
Translates to: KEFLVVESLTSL*LLARRFSEISA
Trigger: TGCAGAAATCTCTGAGAACCTGCGAGCCAGAAGCAACAAGGATGTCAAGGACTCAACTACCAAGAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp TCCAAAGAGTTCTTGGTAGTTGAGTCCTTGACATCCTaGTTGCTTCTGGCTCGCAGGTTCTCAGAGATTTCT +
Preference number: 6 (lower is better)
Translates to: SKEFLVVESLTS*LLLARRFSEIS
Trigger: AGAAATCTCTGAGAACCTGCGAGCCAGAAGCAACAAGGATGTCAAGGACTCAACTACCAAGAACTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CCA 72 bp GAATGTGGTGAACCGTCTGAAGTTTTACACATGAGTTaGTCAGCATTTGTAGCTCCACAGATGTCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: ECGEPSEVLHMS*SAFVAPQMSER
Trigger: TCTCTCTGACATCTGTGGAGCTACAAATGCTGACCAACTCATGTGTAAAACTTCAGACGGTTCACCACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp ATTTGCTCTCTTCTCTCGTTGGATGTCGCTCTTGATTaGGGAGATTTTGATCTTCAAGGCATCCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: ICSLLSLDVALD*GDFDLQGIQFL
Trigger: GAGGAACTGGATGCCTTGAAGATCAAAATCTCCCAAATCAAGAGCGACATCCAACGAGAGAAGAGAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3
CDS CAA 72 bp CCCTTATTTGCTCTCTTCTCTCGTTGGATGTCGCTCTaGATTTGGGAGATTTTGATCTTCAAGGCATCCAGT +
Preference number: 6 (lower is better)
Translates to: PLFALFSRWMSL*IWEILIFKASS
Trigger: ACTGGATGCCTTGAAGATCAAAATCTCCCAAATCAAGAGCGACATCCAACGAGAGAAGAGAGCAAATAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164107.3