RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCOR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040363

Ensembl transcript IDs: ENSMUST00000043441.13, ENSMUST00000065143.14, ENSMUST00000115512.9, ENSMUST00000115513.9, ENSMUST00000123004.2, ENSMUST00000124033.8, ENSMUST00000145872.8

Found 1106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCATaGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: TPANQTHSPHHTIHP*PATRALYEITPSTE
Trigger: CTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR TCA 90 bp TCCTCACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATaGAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAT +
Preference number: 1 (lower is better)
Translates to: SSPHNTPMARHQSFV*NYAKHRAPFHLFIY
Trigger: ATAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR CCA 90 bp GAATTTATATTACATACCACTGGATCACGTCCAATAGCATTTACCTaGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGTATACCAC +
Preference number: 1 (lower is better)
Translates to: EFILHTTGSRPIAFT*CEQVLCKQNIKVYH
Trigger: GTGGTATACTTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATGTAATATAAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGACACACTGTACACAGTaGGTGGGCGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQTHCTQ*VGGAGG
Trigger: GCCACCTGCCCCGCCCACCCACTGTGTACAGTGTGT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACACACTGTACACAGTaGGTGGGCGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: HTIHPWPATRALYEITPSTHCTQ*VGGAGG
Trigger: GCCACCTGCCCCGCCCACCCACTGTGTACAGTGTGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAACACACTGTACACAGTaGGTGGGCGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQTHCTQ*VGGAGG
Trigger: GCCACCTGCCCCGCCCACCCACTGTGTACAGTGTGT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR CAA 90 bp CATAGTCCTCACCACACAATACACCCATGGCCCGCCACCAGAGCTTaGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCA +
Preference number: 2 (lower is better)
Translates to: HSPHHTIHPWPATRA*YEITPSTELLFIYS
Trigger: TGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGTGAGGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAACACACTGTACACAGTaGGTGGGCGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLTHCTQ*VGGAGG
Trigger: GCCACCTGCCCCGCCCACCCACTGTGTACAGTGTGT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR-3UTR CAA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCCGCCACCAGAGCTTaGTATGAAATTACGCCAAGC +
Preference number: 3 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPATRA*YEITPS
Trigger: GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR TCA 72 bp CACAATACACCCATGGCCCGCCACCAGAGCTTTGTATaGAATTACGCCAAGCACAGAGCTCCTTTTCATTTA +
Preference number: 3 (lower is better)
Translates to: HNTPMARHQSFV*NYAKHRAPFHL
Trigger: TAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR-3UTR CAA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCCGCCACCAGAGCTTaGTATGAAATTACGCCAAGC +
Preference number: 3 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPATRA*YEITPS
Trigger: GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
3UTR CCA 72 bp TTACATACCACTGGATCACGTCCAATAGCATTTACCTaGTGTGAGCAGGTACTCTGTAAACAAAACATAAAA +
Preference number: 3 (lower is better)
Translates to: LHTTGSRPIAFT*CEQVLCKQNIK
Trigger: TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGCGTTGGGGGCTGGTaGTGCAGAGGCTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGVGGW*CRGWAS
Trigger: GGACGCCCAGCCTCTGCATCACCAGCCCCCAACGCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGCGTTGGGGGCTGGTaGTGCAGAGGCTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGVGGW*CRGWAS
Trigger: GGACGCCCAGCCTCTGCATCACCAGCCCCCAACGCC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCGTGGCAGCTGGGTaGCCTGGGTGGCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQSVAAG*PGWPVA
Trigger: TGCTACCGGCCACCCAGGCCACCCAGCTGCCACGCT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTCTCTGCAGCGGGCTaGGTTGGAAGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVSAAG*VGRWTR
Trigger: CCGGGTCCACCTTCCAACTCAGCCCGCTGCAGAGAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGTCTCTGCAGCGGGCTaGGTTGGAAGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSVSAAG*VGRWTR
Trigger: CCGGGTCCACCTTCCAACTCAGCCCGCTGCAGAGAC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTCTCTGCAGCGGGCTaGGTTGGAAGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVSAAG*VGRWTR
Trigger: CCGGGTCCACCTTCCAACTCAGCCCGCTGCAGAGAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCTTGCTGCTGGTGCTaGCACCGTGCTTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPCCWC*HRAWQA
Trigger: CGCCTGCCAAGCACGGTGGCAGCACCAGCAGCAAGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCTTGCTGCTGGTGCTaGCACCGTGCTTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPCCWC*HRAWQA
Trigger: CGCCTGCCAAGCACGGTGGCAGCACCAGCAGCAAGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGTCTCTGCAGCGGGCTaGGTTGGAAGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQVSAAG*VGRWTR
Trigger: CCGGGTCCACCTTCCAACTCAGCCCGCTGCAGAGAC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCATGGGCGGAGAGCCTaGGAGCACAGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHGRRA*EHRQAL
Trigger: CAAGGCTTGCCTGTGCTCTCAGGCTCTCCGCCCATG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCATGGGCGGAGAGCCTaGGAGCACAGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHGRRA*EHRQAL
Trigger: CAAGGCTTGCCTGTGCTCTCAGGCTCTCCGCCCATG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTTTGGCAGGCAGCCTTaGGGCTGGCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSFGRQP*GWRAAW
Trigger: CCAAGCTGCACGCCAGCCTCAAGGCTGCCTGCCAAA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTTTGGCAGGCAGCCTTaGGGCTGGCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQFGRQP*GWRAAW
Trigger: CCAAGCTGCACGCCAGCCTCAAGGCTGCCTGCCAAA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGCCTGTGCGGTCCATaGTCAGTGCTGCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGLCGP*SVLPGH
Trigger: ATGGCCTGGCAGCACTGAGCATGGACCGCACAGGCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGGCCTGTGCGGTCCATaGTCAGTGCTGCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQGLCGP*SVLPGH
Trigger: ATGGCCTGGCAGCACTGAGCATGGACCGCACAGGCC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCGTGCTTGGCAGGCGTaGATGAGGGCTGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQRAWQA*MRAGPH
Trigger: ATGTGGGCCAGCCCTCATCCACGCCTGCCAAGCACG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGTCAGCTGAGGGCTTaGTGGCCTCGGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGQLRA*WPRCPD
Trigger: GTCAGGACACCGAGGCCACCAAGCCCTCAGCTGACC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGGTCAGCTGAGGGCTTaGTGGCCTCGGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQGQLRA*WPRCPD
Trigger: GTCAGGACACCGAGGCCACCAAGCCCTCAGCTGACC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCCACCCCCTGGTCACTaGGTGGCTCACTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQPPPGH*VAHSQV
Trigger: CACCTGTGAGTGAGCCACCCAGTGACCAGGGGGTGG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCACCCCCTGGTCACTaGGTGGCTCACTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPPPGH*VAHSQV
Trigger: CACCTGTGAGTGAGCCACCCAGTGACCAGGGGGTGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTGTCCACCACCCCCTaGTCACTGGGTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVSTTP*SLGGSL
Trigger: GAGTGAGCCACCCAGTGACCAGGGGGTGGTGGACAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTGTCCACCACCCCCTaGTCACTGGGTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVSTTP*SLGGSL
Trigger: GAGTGAGCCACCCAGTGACCAGGGGGTGGTGGACAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAGCGTGGCAGCTGGGTaGCCTGGGTGGCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCSVAAG*PGWPVA
Trigger: TGCTACCGGCCACCCAGGCCACCCAGCTGCCACGCT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATTTGAGCGTGGCAGCTaGGTGGCCTGGGTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQFERGS*VAWVAG
Trigger: ACCGGCCACCCAGGCCACCCAGCTGCCACGCTCAAA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGAGCTTCTGGCGGCATaGGGCGAGACTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFELLAA*GETGWS
Trigger: AGACCACCCAGTCTCGCCCCATGCCGCCAGAAGCTC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGAGCTTCTGGCGGCATaGGGCGAGACTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSELLAA*GETGWS
Trigger: AGACCACCCAGTCTCGCCCCATGCCGCCAGAAGCTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTATCCACCACGCTGTaGCTCAGGGGAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVSTTL*LRGVSS
Trigger: GGAGGAGACTCCCCTGAGTCACAGCGTGGTGGATAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTATCCACCACGCTGTaGCTCAGGGGAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVSTTL*LRGVSS
Trigger: GGAGGAGACTCCCCTGAGTCACAGCGTGGTGGATAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTGGGTTCCCAGGGTTaGCGCCCATCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLGSQG*RPSSMG
Trigger: TCCCATGGAAGATGGGCGTCAACCCTGGGAACCCAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTGGGTTCCCAGGGTTaGCGCCCATCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLGSQG*RPSSMG
Trigger: TCCCATGGAAGATGGGCGTCAACCCTGGGAACCCAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGTCTCTGCAGCGGGCTaGGTTGGAAGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCVSAAG*VGRWTR
Trigger: CCGGGTCCACCTTCCAACTCAGCCCGCTGCAGAGAC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTGCCCAGGCATGGATTaGGCACAGTCGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQCPGMD*AQSPPS
Trigger: AGATGGGGGCGACTGTGCTCAATCCATGCCTGGGCA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGCCCAGGCATGGATTaGGCACAGTCGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFCPGMD*AQSPPS
Trigger: AGATGGGGGCGACTGTGCTCAATCCATGCCTGGGCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGGCGTTGGGGGCTGGTaGTGCAGAGGCTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHGVGGW*CRGWAS
Trigger: GGACGCCCAGCCTCTGCATCACCAGCCCCCAACGCC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCCGCTGCTCTCGGCTaGGCTGACTGGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPAALG*ADWNLH
Trigger: ATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCCCGCTGCTCTCGGCTaGGCTGACTGGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQPAALG*ADWNLH
Trigger: ATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCCAGTCGGCTGGGCTaGATTTGCACACCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPSRLG*ICTPRS
Trigger: ACTCCGAGGTGTGCAAATTCAGCCCAGCCGACTGGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCCCAGTCGGCTGGGCTaGATTTGCACACCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQPSRLG*ICTPRS
Trigger: ACTCCGAGGTGTGCAAATTCAGCCCAGCCGACTGGG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAGGTGACCTCAGGCTaGACAGCCTGGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQEVTSG*TAWATS
Trigger: GGAAGTGGCCCAGGCTGTTCAGCCTGAGGTCACCTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGGCCTGTGCGGTCCATaGTCAGTGCTGCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQGLCGP*SVLPGH
Trigger: ATGGCCTGGCAGCACTGAGCATGGACCGCACAGGCC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCATCTGTGCCACCCATaGGGGGACACGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHLCHP*GDTRNS
Trigger: GGAGTTCCTCGTGTCCCCGCATGGGTGGCACAGATG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCATCTGTGCCACCCATaGGGGGACACGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHLCHP*GDTRNS
Trigger: GGAGTTCCTCGTGTCCCCGCATGGGTGGCACAGATG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCTTGCTGCTGGTGCTaGCACCGTGCTTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPCCWC*HRAWQA
Trigger: CGCCTGCCAAGCACGGTGGCAGCACCAGCAGCAAGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTTTGGCTCCCTTGCTaGTGGTGCTGCCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLWLPC*WCCHRA
Trigger: AGCACGGTGGCAGCACCAGCAGCAAGGGAGCCAAAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGGCTTTGGCTCCCTTaGTGCTGGTGCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSWLWLP*CWCCHR
Trigger: ACGGTGGCAGCACCAGCAGCAAGGGAGCCAAAGCCA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCGCATCATTGCACGCTaGAATGCCCGCTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRIIAR*NARCSR
Trigger: CCGAGAGCAGCGGGCATTGCAGCGTGCAATGATGCG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043441.13
ENSMUST00000115512.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGGCCACTTCCTTCCTaGTTTGCCGGCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGPLPS*FAGQVC
Trigger: GCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGGCCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGGCCACTTCCTTCCTaGTTTGCCGGCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGPLPS*FAGQVC
Trigger: GCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGGCCC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGCCTTGAGGCTGGCGTaGAGCTTGGCTGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFALRLA*SLAESA
Trigger: AGCAGACTCAGCCAAGCTGCACGCCAGCCTCAAGGC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGCCTTGAGGCTGGCGTaGAGCTTGGCTGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQALRLA*SLAESA
Trigger: AGCAGACTCAGCCAAGCTGCACGCCAGCCTCAAGGC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGACGAGAGGTGGAATaGCCGCAGAGGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGREVE*PQRLKV
Trigger: CACCTTCAGCCTCTGCGGCCATTCCACCTCTCGTCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGGACGAGAGGTGGAATaGCCGCAGAGGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQGREVE*PQRLKV
Trigger: CACCTTCAGCCTCTGCGGCCATTCCACCTCTCGTCC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCATTGGCGTTGGCGTTaGGGGCTGGTGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSHWRWR*GLVMQR
Trigger: CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGGTGCCATCTGCATTaGCGTTGGCGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFWCHLH*RWRWGL
Trigger: CAGCCCCCAACGCCAACGCCAATGCAGATGGCACCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAGGCAGGCCAGGCTTTaGGGCAAGGTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRQARL*GKVPRK
Trigger: TTTCCTGGGCACCTTGCCCCAAAGCCTGGCCTGCCT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGGATCAACATGGGATaGACCATGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGINMG*TMPRPR
Trigger: CCTGGGCCTGGGCATGGTCCATCCCATGTTGATCCC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCGGCTACGGAGGGTTaGGTCCTCATAACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPATEG*VLITGS
Trigger: AGAGCCCGTTATGAGGACCCAACCCTCCGTAGCCGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCAGCTGAGGGCTTGGTaGCCTCGGTGTCCTGACCTA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQQLRAW*PRCPDL
Trigger: TAGGTCAGGACACCGAGGCCACCAAGCCCTCAGCTG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCAGCTGAGGGCTTGGTaGCCTCGGTGTCCTGACCTA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFQLRAW*PRCPDL
Trigger: TAGGTCAGGACACCGAGGCCACCAAGCCCTCAGCTG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACCACCCCCTGGTCACTaGGTGGCTCACTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQPPPGH*VAHSQV
Trigger: CACCTGTGAGTGAGCCACCCAGTGACCAGGGGGTGG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAGCGGGGAGGCAGCCTaGCAATCCTCGTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQSGEAA*QSSSSP
Trigger: AGGGGAAGACGAGGATTGCCAGGCTGCCTCCCCGCT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACAGCGTGGCAGCTGGGTaGCCTGGGTGGCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYSVAAG*PGWPVA
Trigger: TGCTACCGGCCACCCAGGCCACCCAGCTGCCACGCT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTTTGAGCGTGGCAGCTaGGTGGCCTGGGTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCFERGS*VAWVAG
Trigger: ACCGGCCACCCAGGCCACCCAGCTGCCACGCTCAAA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAAGTCTCCGAGCTTCTaGCGGCATGGGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQKSPSF*RHGARL
Trigger: CAGTCTCGCCCCATGCCGCCAGAAGCTCGGAGACTT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAAGTCTCCGAGCTTCTaGCGGCATGGGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFKSPSF*RHGARL
Trigger: CAGTCTCGCCCCATGCCGCCAGAAGCTCGGAGACTT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCCGTGTCACTAGGGTaGAGCCACTCCACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPVSLG*SHSTEE
Trigger: CTCCTCTGTGGAGTGGCTCCACCCTAGTGACACGGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGGGAGGCTTTTGTCTaGGCAGTGGACGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFWEAFV*AVDERW
Trigger: CCACCTCTCGTCCACTGCTCAGACAAAAGCCTCCCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTGGGAGGCTTTTGTCTaGGCAGTGGACGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQWEAFV*AVDERW
Trigger: CCACCTCTCGTCCACTGCTCAGACAAAAGCCTCCCA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCATGGCTTCGTCAGGGTaGCTGAGGGAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSMASSG*LRERWR
Trigger: TCTCCACCTCTCCCTCAGTCACCCTGACGAAGCCAT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATGCCCAGGCATGGATTaGGCACAGTCGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQCPGMD*AQSPPS
Trigger: AGATGGGGGCGACTGTGCTCAATCCATGCCTGGGCA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGGCACCACCCAGGATaGGGGAGCAGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFWHHPG*GSSADD
Trigger: ATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGGCACCACCCAGGATaGGGGAGCAGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSWHHPG*GSSADD
Trigger: ATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACCCGCTGCTCTCGGCTaGGCTGACTGGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQPAALG*ADWNLH
Trigger: ATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACCCAGTCGGCTGGGCTaGATTTGCACACCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQPSRLG*ICTPRS
Trigger: ACTCCGAGGTGTGCAAATTCAGCCCAGCCGACTGGG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGAGGTGACCTCAGGCTaGACAGCCTGGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCEVTSG*TAWATS
Trigger: GGAAGTGGCCCAGGCTGTTCAGCCTGAGGTCACCTC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCATGGGCGGAGAGCCTaGGAGCACAGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCHGRRA*EHRQAL
Trigger: CAAGGCTTGCCTGTGCTCTCAGGCTCTCCGCCCATG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTTTGGCAGGCAGCCTTaGGGCTGGCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCFGRQP*GWRAAW
Trigger: CCAAGCTGCACGCCAGCCTCAAGGCTGCCTGCCAAA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTCCATGCTCAGTGCTaGCAGGCCATCGATCCGATG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVHAQC*QAIDPM
Trigger: CATCGGATCGATGGCCTGGCAGCACTGAGCATGGAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTCCATGCTCAGTGCTaGCAGGCCATCGATCCGATG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVHAQC*QAIDPM
Trigger: CATCGGATCGATGGCCTGGCAGCACTGAGCATGGAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTCGGAGTAGGTCTCTaGAGCGGGCTGAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLGVGL*SGLSWK
Trigger: CTTCCAACTCAGCCCGCTGCAGAGACCTACTCCGAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTCGGAGTAGGTCTCTaGAGCGGGCTGAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLGVGL*SGLSWK
Trigger: CTTCCAACTCAGCCCGCTGCAGAGACCTACTCCGAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGTCTTGGTGCCATCTaGATTGGCGTTGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGLGAI*IGVGVG
Trigger: CCCAACGCCAACGCCAATGCAGATGGCACCAAGACC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGGTCTTGGTGCCATCTaGATTGGCGTTGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQGLGAI*IGVGVG
Trigger: CCCAACGCCAACGCCAATGCAGATGGCACCAAGACC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGCTTTGGGGCAAGGTaGCCAGGAAACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGFGAR*PGNRLP
Trigger: TGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACAGCAGGGCCCTCACTaGCCAGAGCTGTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQQQGPH*PELSPR
Trigger: TCTTGGAGACAGCTCTGGGCAGTGAGGGCCCTGCTG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACGCATCATTGCACGCTaGAATGCCCGCTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQRIIAR*NARCSR
Trigger: CCGAGAGCAGCGGGCATTGCAGCGTGCAATGATGCG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043441.13
ENSMUST00000115512.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATTTGCCGGCCAGGTTTaGTCTCGGCTGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQFAGQV*SRLPTP
Trigger: AGGTGTCGGCAGCCGAGAGCAAACCTGGCCGGCAAA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTCCTTCCATCTGCAATaGCCGCTGCTCTCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSSFHLQ*PLLSAE
Trigger: CTCAGCCGAGAGCAGCGGGCATTGCAGATGGAAGGA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065143.14
ENSMUST00000115513.9
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCCTCAGCTCCAGCCTaGCTTTTGAAGCGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPSAPA*LLKRRH
Trigger: ATGGCGACGCTTCAAAAGCCAGGCTGGAGCTGAGGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGCCACTGAGAGAGCTTaGGGTAGCCTCCCGACCTTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFATERA*GSLPTF
Trigger: AAAGGTCGGGAGGCTACCCCAAGCTCTCTCAGTGGC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCGAGGAAAGGGTATATaGCTGGAGTGGCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRGKGI*LEWPPP
Trigger: TGGAGGGGGCCACTCCAGCCATATACCCTTTCCTCG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCGAGGAAAGGGTATATaGCTGGAGTGGCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQRGKGI*LEWPPP
Trigger: TGGAGGGGGCCACTCCAGCCATATACCCTTTCCTCG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCGAGGAAAGGGTATATaGCTGGAGTGGCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSRGKGI*LEWPPP
Trigger: TGGAGGGGGCCACTCCAGCCATATACCCTTTCCTCG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGAGAGCTGTGTCCCCTaGCAGGCCACTATTGACTGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSESCVP*QATIDC
Trigger: GCAGTCAATAGTGGCCTGCCAGGGGACACAGCTCTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGAGAGCTGTGTCCCCTaGCAGGCCACTATTGACTGC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQESCVP*QATIDC
Trigger: GCAGTCAATAGTGGCCTGCCAGGGGACACAGCTCTC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACATTGGCGTTGGCGTTaGGGGCTGGTGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQHWRWR*GLVMQR
Trigger: CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCATCTGCATTGGCGTTaGCGTTGGGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSHLHWR*RWGLVM
Trigger: CATCACCAGCCCCCAACGCCAACGCCAATGCAGATG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCATCTGCATTGGCGTTaGCGTTGGGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHLHWR*RWGLVM
Trigger: CATCACCAGCCCCCAACGCCAACGCCAATGCAGATG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCATCTGCATTGGCGTTaGCGTTGGGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHLHWR*RWGLVM
Trigger: CATCACCAGCCCCCAACGCCAACGCCAATGCAGATG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTTCTGGGTTGGCTTTaGCTCCCTTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVLGWL*LPCCWC
Trigger: GCACCAGCAGCAAGGGAGCCAAAGCCAACCCAGAAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGTTCTGGGTTGGCTTTaGCTCCCTTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSVLGWL*LPCCWC
Trigger: GCACCAGCAGCAAGGGAGCCAAAGCCAACCCAGAAC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACAGCTGAGGGCTTGGTaGCCTCGGTGTCCTGACCTA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQQLRAW*PRCPDL
Trigger: TAGGTCAGGACACCGAGGCCACCAAGCCCTCAGCTG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGTCAGCTGAGGGCTTaGTGGCCTCGGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGQLRA*WPRCPD
Trigger: GTCAGGACACCGAGGCCACCAAGCCCTCAGCTGACC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACGGTCAAAGGGCTTTaGCTCCTGCTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSTVKGL*LLLGWW
Trigger: CCACCAGCCAAGCAGGAGCCAAAGCCCTTTGACCGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTACGGTCAAAGGGCTTTaGCTCCTGCTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFTVKGL*LLLGWW
Trigger: CCACCAGCCAAGCAGGAGCCAAAGCCCTTTGACCGT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAGCGTGGCAGCTGGGTaGCCTGGGTGGCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHSVAAG*PGWPVA
Trigger: TGCTACCGGCCACCCAGGCCACCCAGCTGCCACGCT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGAGCTTCTGGCGGCATaGGGCGAGACTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCELLAA*GETGWS
Trigger: AGACCACCCAGTCTCGCCCCATGCCGCCAGAAGCTC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCATCATGCAGAGGCCTaGTTCCATCCTGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHHAEA*FHPGHC
Trigger: GCAGTGCCCAGGATGGAACCAGGCCTCTGCATGATG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTCCCGACCTTTTTCTaGGCCCAATCCACACAAGCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLPTFF*AQSTQA
Trigger: GGCTTGTGTGGATTGGGCTCAGAAAAAGGTCGGGAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAGGGGATGTGAGGGTTaGCATAGTGTGGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQRGCEG*HSVGVA
Trigger: TGCCACCCCCACACTATGTCAACCCTCACATCCCCT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTTCGTCAGGGTGACTaGGGGAGAGGTGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLRQGD*GRGGDP
Trigger: AGGATCTCCACCTCTCCCTCAGTCACCCTGACGAAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAATGGCTTCGTCAGGGTaGCTGAGGGAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQMASSG*LRERWR
Trigger: TCTCCACCTCTCCCTCAGTCACCCTGACGAAGCCAT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATGGCACCACCCAGGATaGGGGAGCAGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQWHHPG*GSSADD
Trigger: ATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCCAGTCGGCTGGGCTaGATTTGCACACCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPSRLG*ICTPRS
Trigger: ACTCCGAGGTGTGCAAATTCAGCCCAGCCGACTGGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGTGGGTGCTGTCACCTaGCAGTTTGCGTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSVGAVT*QFAFPV
Trigger: GACAGGAAACGCAAACTGTCAGGTGACAGCACCCAC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGAGGTGACCTCAGGCTaGACAGCCTGGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYEVTSG*TAWATS
Trigger: GGAAGTGGCCCAGGCTGTTCAGCCTGAGGTCACCTC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGCGTGCAGCTTGGCTaGGTCTGCTTTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGVQLG*VCFLPL
Trigger: AAGTGGCAAAAAGCAGACTCAGCCAAGCTGCACGCC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGCGTGCAGCTTGGCTaGGTCTGCTTTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGVQLG*VCFLPL
Trigger: AAGTGGCAAAAAGCAGACTCAGCCAAGCTGCACGCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGACTGGGTGGTCTCTTaGGGAGAATTTGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSDWVVS*GEFERG
Trigger: GCCACGCTCAAATTCTCCTCAAGAGACCACCCAGTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGCGGTCCATGCTCAGTaGTGCCAGGCCATCGATCCG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYAVHAQ*CQAIDP
Trigger: CGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGAGCCTTGGGGTACTTaGCATTGGACAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQEPWGT*HWTAWM
Trigger: CATCCAGGCTGTCCAATGGCAAGTACCCCAAGGCTC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGAGCCTTGGGGTACTTaGCATTGGACAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSEPWGT*HWTAWM
Trigger: CATCCAGGCTGTCCAATGGCAAGTACCCCAAGGCTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCATCTGTGCCACCCATaGGGGGACACGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCHLCHP*GDTRNS
Trigger: GGAGTTCCTCGTGTCCCCGCATGGGTGGCACAGATG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTATCCACCGAGCTCCTaGTGGTCTTGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSYPPSS*WSWCHL
Trigger: CAGATGGCACCAAGACCAGCAGGAGCTCGGTGGATA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCTTGCTGCTGGTGCTaGCACCGTGCTTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPCCWC*HRAWQA
Trigger: CGCCTGCCAAGCACGGTGGCAGCACCAGCAGCAAGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTTTGGCTCCCTTGCTaGTGGTGCTGCCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLWLPC*WCCHRA
Trigger: AGCACGGTGGCAGCACCAGCAGCAAGGGAGCCAAAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCGGTCTCAGTGTGGGTaGTGTCACCTGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRSQCG*CHLTVC
Trigger: GCAAACTGTCAGGTGACAGCACCCACACTGAGACCG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTCGGCTGCCGACACCTaGTGCTCCCACCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCSAADT*CSHRSL
Trigger: TAGAGAACGGTGGGAGCAGCAGGTGTCGGCAGCCGA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTTTGCCGGCCAGGTTTaGTCTCGGCTGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCFAGQV*SRLPTP
Trigger: AGGTGTCGGCAGCCGAGAGCAAACCTGGCCGGCAAA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGGCCACTTCCTTCCTaGTTTGCCGGCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGPLPS*FAGQVC
Trigger: GCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGGCCC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGCCTTGAGGCTGGCGTaGAGCTTGGCTGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCALRLA*SLAESA
Trigger: AGCAGACTCAGCCAAGCTGCACGCCAGCCTCAAGGC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCACTGAGAGAGCTTaGGGTAGCCTCCCGACCTTT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQATERA*GSLPTF
Trigger: AAAGGTCGGGAGGCTACCCCAAGCTCTCTCAGTGGC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACGAGGAAAGGGTATATaGCTGGAGTGGCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQRGKGI*LEWPPP
Trigger: TGGAGGGGGCCACTCCAGCCATATACCCTTTCCTCG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGACAGGAGAATACAGTaGCTGGGCCAAGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFDRRIQ*LGQAVG
Trigger: TCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGACATAGTGTGGGGGTaGCAGGTAGAGGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFDIVWG*QVEEAF
Trigger: GAACGCTTCCTCTACCTGCCACCCCCACACTATGTC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGACATAGTGTGGGGGTaGCAGGTAGAGGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQDIVWG*QVEEAF
Trigger: GAACGCTTCCTCTACCTGCCACCCCCACACTATGTC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCAGAGGCTGAAGGTGTaGAGAGCCTCATGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFQRLKV*RASWVK
Trigger: CTTCACCCATGAGGCTCTCCACACCTTCAGCCTCTG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCAGAGGCTGAAGGTGTaGAGAGCCTCATGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSQRLKV*RASWVK
Trigger: CTTCACCCATGAGGCTCTCCACACCTTCAGCCTCTG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAGAGCTGTGTCCCCTaGCAGGCCACTATTGACTGC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQESCVP*QATIDC
Trigger: GCAGTCAATAGTGGCCTGCCAGGGGACACAGCTCTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTCTTCATTAGGACTTaGCCCTGGCACCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLFIRT*PWHHPG
Trigger: TCCTGGGTGGTGCCAGGGCCAAGTCCTAATGAAGAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTCTTCATTAGGACTTaGCCCTGGCACCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLFIRT*PWHHPG
Trigger: TCCTGGGTGGTGCCAGGGCCAAGTCCTAATGAAGAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCATTGGCGTTGGCGTTaGGGGCTGGTGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCHWRWR*GLVMQR
Trigger: CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACATCTGCATTGGCGTTaGCGTTGGGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQHLHWR*RWGLVM
Trigger: CATCACCAGCCCCCAACGCCAACGCCAATGCAGATG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGGTGCCATCTGCATTaGCGTTGGCGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCWCHLH*RWRWGL
Trigger: CAGCCCCCAACGCCAACGCCAATGCAGATGGCACCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCGTGCTTGGCAGGCGTaGATGAGGGCTGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYRAWQA*MRAGPH
Trigger: ATGTGGGCCAGCCCTCATCCACGCCTGCCAAGCACG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAGGCAGGCCAGGCTTTaGGGCAAGGTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCRQARL*GKVPRK
Trigger: TTTCCTGGGCACCTTGCCCCAAAGCCTGGCCTGCCT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGTGTGGGATCAACATaGGATGGACCATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSCVGST*DGPCPG
Trigger: GCCTGGGCATGGTCCATCCCATGTTGATCCCACACA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCGGCTACGGAGGGTTaGGTCCTCATAACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPATEG*VLITGS
Trigger: AGAGCCCGTTATGAGGACCCAACCCTCCGTAGCCGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCTTTCCCAGTCGGCTaGGCTGAATTTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPFPVG*AEFAHL
Trigger: GAGGTGTGCAAATTCAGCCCAGCCGACTGGGAAAGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTGTCCACCACCCCCTaGTCACTGGGTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVSTTP*SLGGSL
Trigger: GAGTGAGCCACCCAGTGACCAGGGGGTGGTGGACAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTACAGCGGTCTCAGTGTaGGTGCTGTCACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFTAVSV*VLSPDS
Trigger: ACTGTCAGGTGACAGCACCCACACTGAGACCGCTGT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCGGTCTCAGTGTaGGTGCTGTCACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSTAVSV*VLSPDS
Trigger: ACTGTCAGGTGACAGCACCCACACTGAGACCGCTGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGGCTGGCGTGCAGCTTaGCTGAGTCTGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQGWRAA*LSLLFA
Trigger: GGCAAAAAGCAGACTCAGCCAAGCTGCACGCCAGCC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACAGCGGGGAGGCAGCCTaGCAATCCTCGTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYSGEAA*QSSSSP
Trigger: AGGGGAAGACGAGGATTGCCAGGCTGCCTCCCCGCT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAACGGTCAAAGGGCTTTaGCTCCTGCTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQTVKGL*LLLGWW
Trigger: CCACCAGCCAAGCAGGAGCCAAAGCCCTTTGACCGT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTTGAGCGTGGCAGCTaGGTGGCCTGGGTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHFERGS*VAWVAG
Trigger: ACCGGCCACCCAGGCCACCCAGCTGCCACGCTCAAA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGAGCTTCTGGCGGCATaGGGCGAGACTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYELLAA*GETGWS
Trigger: AGACCACCCAGTCTCGCCCCATGCCGCCAGAAGCTC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGCCTGGTTCCATCCTaGGCACTGCAGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGLVPS*ALQLTS
Trigger: TGATGTCAACTGCAGTGCCCAGGATGGAACCAGGCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACATCATGCAGAGGCCTaGTTCCATCCTGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQHHAEA*FHPGHC
Trigger: GCAGTGCCCAGGATGGAACCAGGCCTCTGCATGATG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTGTTCATCCAGCTGTaGACGTTCCCATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLFIQL*TFPYRG
Trigger: CCCTCTGTATGGGAACGTTCACAGCTGGATGAACAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTATCCACCACGCTGTaGCTCAGGGGAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVSTTL*LRGVSS
Trigger: GGAGGAGACTCCCCTGAGTCACAGCGTGGTGGATAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTCCCGACCTTTTTCTaGGCCCAATCCACACAAGCC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLPTFF*AQSTQA
Trigger: GGCTTGTGTGGATTGGGCTCAGAAAAAGGTCGGGAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGGGAGGCTTTTGTCTaGGCAGTGGACGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCWEAFV*AVDERW
Trigger: CCACCTCTCGTCCACTGCTCAGACAAAAGCCTCCCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTTCGTCAGGGTGACTaGGGGAGAGGTGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLRQGD*GRGGDP
Trigger: AGGATCTCCACCTCTCCCTCAGTCACCCTGACGAAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTTCCAACAGAGGTGGTaGGCCCCCATCTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQFQQRW*APIFSV
Trigger: GACAGAAAAGATGGGGGCTCACCACCTCTGTTGGAA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGCGTTGGGGGCTGGTaGTGCAGAGGCTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGVGGW*CRGWAS
Trigger: GGACGCCCAGCCTCTGCATCACCAGCCCCCAACGCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACCCCAGTCTTCCCTTaGTTCCAGCTAGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSTPVFP*FQLEFG
Trigger: GCCAAACTCTAGCTGGAATCAAGGGAAGACTGGGGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGACCCCAGTCTTCCCTTaGTTCCAGCTAGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQTPVFP*FQLEFG
Trigger: GCCAAACTCTAGCTGGAATCAAGGGAAGACTGGGGT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCATTCATGGAAGTCAGTaGTTCGGCCCAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSIHGSQ*FGPAPL
Trigger: GAGAGGAGCTGGGCCGAATCACTGACTTCCATGAAT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGATTCATGGAAGTCAGTaGTTCGGCCCAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQIHGSQ*FGPAPL
Trigger: GAGAGGAGCTGGGCCGAATCACTGACTTCCATGAAT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTATCCTTGCCTAAGCTaGACACTGGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFYPCLS*TLAGLR
Trigger: CCTCAAGCCAGCCAGTGTTCAGCTTAGGCAAGGATA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCCGCTGCTCTCGGCTaGGCTGACTGGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPAALG*ADWNLH
Trigger: ATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGTGGGTGCTGTCACCTaGCAGTTTGCGTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQVGAVT*QFAFPV
Trigger: GACAGGAAACGCAAACTGTCAGGTGACAGCACCCAC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGAGGTGACCTCAGGCTaGACAGCCTGGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHEVTSG*TAWATS
Trigger: GGAAGTGGCCCAGGCTGTTCAGCCTGAGGTCACCTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACTTGCATTGGTGGATaGAAGGCTCTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSTCIGG*KALHGR
Trigger: CCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTTGGCAGGCAGCCTTaGGGCTGGCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHFGRQP*GWRAAW
Trigger: CCAAGCTGCACGCCAGCCTCAAGGCTGCCTGCCAAA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTCCTCCTGGACTCCTaGGGTATCAAGTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLLLDS*GIKCLV
Trigger: AACCAAGCACTTGATACCTCAGGAGTCCAGGAGGAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTCCTCCTGGACTCCTaGGGTATCAAGTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLLLDS*GIKCLV
Trigger: AACCAAGCACTTGATACCTCAGGAGTCCAGGAGGAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTGCTTGGCTGGTGGTaGCAAATCGTAGTCCGAACT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLLGWW*QIVVRT
Trigger: AGTTCGGACTACGATTTGTCACCACCAGCCAAGCAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTGCTTGGCTGGTGGTaGCAAATCGTAGTCCGAACT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLLGWW*QIVVRT
Trigger: AGTTCGGACTACGATTTGTCACCACCAGCCAAGCAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCTGGGCACTGCAGTTaGCATCAGCGCCATATTCAA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPGHCS*HQRHIQ
Trigger: TTGAATATGGCGCTGATGTCAACTGCAGTGCCCAGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCTGGGCACTGCAGTTaGCATCAGCGCCATATTCAA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPGHCS*HQRHIQ
Trigger: TTGAATATGGCGCTGATGTCAACTGCAGTGCCCAGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCAGTTTCGTGGCCCCTaGGCGACAGACACTTGGATG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCQFRGP*ATDTWM
Trigger: CATCCAAGTGTCTGTCGCTCAGGGGCCACGAAACTG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCACTTGTTCCACACATaGGGACCCTCTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHLFHT*GPSRCS
Trigger: TGAACAGCGAGAGGGTCCGCATGTGTGGAACAAGTG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCACTTGTTCCACACATaGGGACCCTCTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHLFHT*GPSRCS
Trigger: TGAACAGCGAGAGGGTCCGCATGTGTGGAACAAGTG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGTCCATGCTCAGTGCTaGCAGGCCATCGATCCGATG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCVHAQC*QAIDPM
Trigger: CATCGGATCGATGGCCTGGCAGCACTGAGCATGGAC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGCGGTCCATGCTCAGTaGTGCCAGGCCATCGATCCG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHAVHAQ*CQAIDP
Trigger: CGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGGCCTGTGCGGTCCATaGTCAGTGCTGCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHGLCGP*SVLPGH
Trigger: ATGGCCTGGCAGCACTGAGCATGGACCGCACAGGCC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAGCGTTCCCCACTGGTaGAGACAGGAGAATACAGTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFSVPHW*RQENTV
Trigger: CACTGTATTCTCCTGTCTGCACCAGTGGGGAACGCT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCAGCGTTCCCCACTGGTaGAGACAGGAGAATACAGTG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSSVPHW*RQENTV
Trigger: CACTGTATTCTCCTGTCTGCACCAGTGGGGAACGCT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCGTTCCCCACTGGTaGAGACAGGAGAATACAGTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQSVPHW*RQENTV
Trigger: CACTGTATTCTCCTGTCTGCACCAGTGGGGAACGCT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGAGGAACTCCGCTGTTaGGGTATTGCCCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQEELRC*GIAQSK
Trigger: TTTGGACTGGGCAATACCGCAACAGCGGAGTTCCTC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGTCTTGGTGCCATCTaGATTGGCGTTGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGLGAI*IGVGVG
Trigger: CCCAACGCCAACGCCAATGCAGATGGCACCAAGACC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCTTTGGCTCCCTTGCTaGTGGTGCTGCCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYLWLPC*WCCHRA
Trigger: AGCACGGTGGCAGCACCAGCAGCAAGGGAGCCAAAG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGATGCCTTCTGGTGCTaGGTAAGGGAGGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQDAFWC*VREVTP
Trigger: AGGAGTTACCTCCCTTACGCAGCACCAGAAGGCATC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGATGCCTTCTGGTGCTaGGTAAGGGAGGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSDAFWC*VREVTP
Trigger: AGGAGTTACCTCCCTTACGCAGCACCAGAAGGCATC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTGGGGACTTCTGGATaGAGTTTGGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVGTSG*SLVLLA
Trigger: AGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTGGGGACTTCTGGATaGAGTTTGGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVGTSG*SLVLLA
Trigger: AGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTCGGAGTCTTTGGTTaGTGGGTGGCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLGVFG*WVATFS
Trigger: AGAGAAGGTAGCCACCCAGCAACCAAAGACTCCGAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTCGGAGTCTTTGGTTaGTGGGTGGCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLGVFG*WVATFS
Trigger: AGAGAAGGTAGCCACCCAGCAACCAAAGACTCCGAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTCGGAGTCTTTGGTTaGTGGGTGGCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLGVFG*WVATFS
Trigger: AGAGAAGGTAGCCACCCAGCAACCAAAGACTCCGAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACGGTCTCAGTGTGGGTaGTGTCACCTGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQRSQCG*CHLTVC
Trigger: GCAAACTGTCAGGTGACAGCACCCACACTGAGACCG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTCGGCTGCCGACACCTaGTGCTCCCACCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYSAADT*CSHRSL
Trigger: TAGAGAACGGTGGGAGCAGCAGGTGTCGGCAGCCGA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTTTGCCGGCCAGGTTTaGTCTCGGCTGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYFAGQV*SRLPTP
Trigger: AGGTGTCGGCAGCCGAGAGCAAACCTGGCCGGCAAA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAACTTCCTTCCTGCTTTaGCGGCCAGGTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQTSFLL*RPGLLS
Trigger: CGAGAGCAAACCTGGCCGGCAAAGCAGGAAGGAAGT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTTGCCTTTGGCCTCTaGCTTTTTCCTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVAFGL*LFPARL
Trigger: AAGCCTGGCAGGAAAAAGGCAGAGGCCAAAGGCAAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCAGACCAGCCTCTGTTaGCTTTGGCCTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSQTSLC*LWPLPF
Trigger: AAAAGGCAGAGGCCAAAGGCAACAGAGGCTGGTCTG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCTCGTCTTCCCCTGTaGACAGCACATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPRLPL*TAHLSS
Trigger: AGAAGACAGATGTGCTGTGCACAGGGGAAGACGAGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGTTCACACACAGAGCTaGCATAGAACTCCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSVHTQS*HRTPKR
Trigger: GCGCTTGGGAGTTCTATGGCAGCTCTGTGTGTGAAC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGGCTCTGTTTGTCACTaGCAGGCCTATCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQGSVCH*QAYPNP
Trigger: TGGGTTTGGATAGGCCTGCCAGTGACAAACAGAGCC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGAAAGGGTATATGGCTaGAGTGGCCCCCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFERVYG*SGPLHV
Trigger: TACATGGAGGGGGCCACTCCAGCCATATACCCTTTC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCGAGGAAAGGGTATATaGCTGGAGTGGCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCRGKGI*LEWPPP
Trigger: TGGAGGGGGCCACTCCAGCCATATACCCTTTCCTCG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGACAGGAGAATACAGTaGCTGGGCCAAGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQDRRIQ*LGQAVG
Trigger: TCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGAAGCGTTCCCCACTaGTGCAGACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGSVPH*CRQENT
Trigger: TGTATTCTCCTGTCTGCACCAGTGGGGAACGCTTCC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGGAAGCGTTCCCCACTaGTGCAGACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQGSVPH*CRQENT
Trigger: TGTATTCTCCTGTCTGCACCAGTGGGGAACGCTTCC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACAGAGGCTGAAGGTGTaGAGAGCCTCATGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQQRLKV*RASWVK
Trigger: CTTCACCCATGAGGCTCTCCACACCTTCAGCCTCTG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGGACGAGAGGTGGAATaGCCGCAGAGGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYGREVE*PQRLKV
Trigger: CACCTTCAGCCTCTGCGGCCATTCCACCTCTCGTCC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTTTTGTCTGAGCAGTaGACGAGAGGTGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLLSEQ*TRGGMA
Trigger: GGCCATTCCACCTCTCGTCCACTGCTCAGACAAAAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTTTTGTCTGAGCAGTaGACGAGAGGTGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLLSEQ*TRGGMA
Trigger: GGCCATTCCACCTCTCGTCCACTGCTCAGACAAAAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCCCATCTAGAGCCTTaGGGTACTTGCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPHLEP*GTCHWT
Trigger: TGTCCAATGGCAAGTACCCCAAGGCTCTAGATGGGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTCATGTGGTCACCTTTaGAAGCGTCCGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQSCGHL*KRPHPP
Trigger: TGGTGGATGCGGACGCTTCCAAAGGTGACCACATGA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTCATGTGGTCACCTTTaGAAGCGTCCGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSSCGHL*KRPHPP
Trigger: TGGTGGATGCGGACGCTTCCAAAGGTGACCACATGA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCGTGCTTGGCAGGCGTaGATGAGGGCTGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHRAWQA*MRAGPH
Trigger: ATGTGGGCCAGCCCTCATCCACGCCTGCCAAGCACG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGGGATCAACATGGGATaGACCATGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYGINMG*TMPRPR
Trigger: CCTGGGCCTGGGCATGGTCCATCCCATGTTGATCCC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTCAATGGGCGTGTGTaGGATCAACATGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLNGRV*DQHGMD
Trigger: GTCCATCCCATGTTGATCCCACACACGCCCATTGAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCGGCTACGGAGGGTTaGGTCCTCATAACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPATEG*VLITGS
Trigger: AGAGCCCGTTATGAGGACCCAACCCTCCGTAGCCGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTACAAGGCCTGCTTTaGGTGCCCCTGCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLQGLL*VPLHQF
Trigger: AAACTGATGCAGGGGCACCCAAAGCAGGCCTTGTAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGAGTCTTTGGTTGCTaGGTGGCTACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGVFGC*VATFSL
Trigger: GAGAGAGAAGGTAGCCACCCAGCAACCAAAGACTCC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGGAGTCTTTGGTTGCTaGGTGGCTACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSGVFGC*VATFSL
Trigger: GAGAGAGAAGGTAGCCACCCAGCAACCAAAGACTCC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACACCTCGGAGTCTTTaGTTGCTGGGTGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSTPRSL*LLGGYL
Trigger: AAGGTAGCCACCCAGCAACCAAAGACTCCGAGGTGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCACCCCCTGGTCACTaGGTGGCTCACTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPPPGH*VAHSQV
Trigger: CACCTGTGAGTGAGCCACCCAGTGACCAGGGGGTGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGATGAAAGGCTCTTCATaGGCGGAGAGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQMKGSS*AESLRA
Trigger: TGCTCTCAGGCTCTCCGCCCATGAAGAGCCTTTCAT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGCTGGCGTGCAGCTTaGCTGAGTCTGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGWRAA*LSLLFA
Trigger: GGCAAAAAGCAGACTCAGCCAAGCTGCACGCCAGCC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGCTTTGGCTCCTGCTTaGCTGGTGGTGACAAATCGT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQALAPA*LVVTNR
Trigger: ACGATTTGTCACCACCAGCCAAGCAGGAGCCAAAGC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGCTTTGGCTCCTGCTTaGCTGGTGGTGACAAATCGT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFALAPA*LVVTNR
Trigger: ACGATTTGTCACCACCAGCCAAGCAGGAGCCAAAGC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACAAGTCTCCGAGCTTCTaGCGGCATGGGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYKSPSF*RHGARL
Trigger: CAGTCTCGCCCCATGCCGCCAGAAGCTCGGAGACTT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGGCCTGGTTCCATCCTaGGCACTGCAGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQGLVPS*ALQLTS
Trigger: TGATGTCAACTGCAGTGCCCAGGATGGAACCAGGCC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAGGCTTCCAGGTCTTTaGGGCAGGAGAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRLPGL*GRRTRD
Trigger: GTCTCTTGTTCTCCTGCCCCAAAGACCTGGAAGCCT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCAGGCTTCCAGGTCTTTaGGGCAGGAGAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSRLPGL*GRRTRD
Trigger: GTCTCTTGTTCTCCTGCCCCAAAGACCTGGAAGCCT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGAGCCCAGCAGTGTCTaGAGCTCATTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSEPSSV*SSLVNS
Trigger: GGAATTCACCAATGAGCTCCAGACACTGCTGGGCTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGAGCCCAGCAGTGTCTaGAGCTCATTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQEPSSV*SSLVNS
Trigger: GGAATTCACCAATGAGCTCCAGACACTGCTGGGCTC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGAGCCCAGCAGTGTCTaGAGCTCATTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFEPSSV*SSLVNS
Trigger: GGAATTCACCAATGAGCTCCAGACACTGCTGGGCTC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCCGTGTCACTAGGGTaGAGCCACTCCACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPVSLG*SHSTEE
Trigger: CTCCTCTGTGGAGTGGCTCCACCCTAGTGACACGGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTGTTCATCCAGCTGTaGACGTTCCCATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLFIQL*TFPYRG
Trigger: CCCTCTGTATGGGAACGTTCACAGCTGGATGAACAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTATCCACCACGCTGTaGCTCAGGGGAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVSTTL*LRGVSS
Trigger: GGAGGAGACTCCCCTGAGTCACAGCGTGGTGGATAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACAGGGGATGTGAGGGTTaGCATAGTGTGGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYRGCEG*HSVGVA
Trigger: TGCCACCCCCACACTATGTCAACCCTCACATCCCCT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTGGGAGGCTTTTGTCTaGGCAGTGGACGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYWEAFV*AVDERW
Trigger: CCACCTCTCGTCCACTGCTCAGACAAAAGCCTCCCA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTGGGTTCCCAGGGTTaGCGCCCATCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLGSQG*RPSSMG
Trigger: TCCCATGGAAGATGGGCGTCAACCCTGGGAACCCAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCATCTTTTCTGTCTTaGACCGTTGTCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPSFLS*TVVFRV
Trigger: CACCCGGAAGACAACGGTTCAAGACAGAAAAGATGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTGGCACCACCCAGGATaGGGGAGCAGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYWHHPG*GSSADD
Trigger: ATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGCTTCTCCTCTTTTGTaGTCTCAATGGGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFASPLL*SQWACV
Trigger: CACACACGCCCATTGAGATCACAAAAGAGGAGAAGC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGCTTCTCCTCTTTTGTaGTCTCAATGGGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQASPLL*SQWACV
Trigger: CACACACGCCCATTGAGATCACAAAAGAGGAGAAGC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCAGTTTGTCGCTTTTaGCCCCAGTCTTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPVCRF*PQSSLD
Trigger: ATCAAGGGAAGACTGGGGTCAAAAGCGACAAACTGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAATTCATGGAAGTCAGTaGTTCGGCCCAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQIHGSQ*FGPAPL
Trigger: GAGAGGAGCTGGGCCGAATCACTGACTTCCATGAAT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCCGCTGCTCTCGGCTaGGCTGACTGGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPAALG*ADWNLH
Trigger: ATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTCTTCCAGGGTGACTaGCTTTGGCTTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLFQGD*LWLLFL
Trigger: CAGGAAAAGAAGCCAAAGTCAGTCACCCTGGAAGAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGGCCTCTTCCAGGGTaGCTGACTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFWPLPG*LTLASF
Trigger: AAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGTGGGTGCTGTCACCTaGCAGTTTGCGTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCVGAVT*QFAFPV
Trigger: GACAGGAAACGCAAACTGTCAGGTGACAGCACCCAC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTCCTCCTGGACTCCTaGGGTATCAAGTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLLLDS*GIKCLV
Trigger: AACCAAGCACTTGATACCTCAGGAGTCCAGGAGGAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCATGATGGTTCTCCCTaGGTATGTGGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSHDGSP*VCGQSR
Trigger: CCTACTTTGGCCACATACTCAGGGAGAACCATCATG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCATGATGGTTCTCCCTaGGTATGTGGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHDGSP*VCGQSR
Trigger: CCTACTTTGGCCACATACTCAGGGAGAACCATCATG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCAGTTTCGTGGCCCCTaGGCGACAGACACTTGGATG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYQFRGP*ATDTWM
Trigger: CATCCAAGTGTCTGTCGCTCAGGGGCCACGAAACTG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCGCCTCTGCAATGGTaGCAATTTCCAGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPPLQW*QFPDWE
Trigger: TTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAGCGTTCCCCACTGGTaGAGACAGGAGAATACAGTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQSVPHW*RQENTV
Trigger: CACTGTATTCTCCTGTCTGCACCAGTGGGGAACGCT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGAGCCTTGGGGTACTTaGCATTGGACAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCEPWGT*HWTAWM
Trigger: CATCCAGGCTGTCCAATGGCAAGTACCCCAAGGCTC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAGGAACTCCGCTGTTaGGGTATTGCCCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQEELRC*GIAQSK
Trigger: TTTGGACTGGGCAATACCGCAACAGCGGAGTTCCTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCATCTGTGCCACCCATaGGGGGACACGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHHLCHP*GDTRNS
Trigger: GGAGTTCCTCGTGTCCCCGCATGGGTGGCACAGATG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTTTGGCTCCCTTGCTaGTGGTGCTGCCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLWLPC*WCCHRA
Trigger: AGCACGGTGGCAGCACCAGCAGCAAGGGAGCCAAAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGCTTTGGCTCCCTTaGTGCTGGTGCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWLWLP*CWCCHR
Trigger: ACGGTGGCAGCACCAGCAGCAAGGGAGCCAAAGCCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGATGCCTTCTGGTGCTaGGTAAGGGAGGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQDAFWC*VREVTP
Trigger: AGGAGTTACCTCCCTTACGCAGCACCAGAAGGCATC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGCTTTGGGTGCCCCTaGATCAGTTTTAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFCFGCP*ISFSVC
Trigger: GCAGACACTAAAACTGATGCAGGGGCACCCAAAGCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAAGGCCTGCTTTGGGTaGCCCTGCATCAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFKACFG*PCISFS
Trigger: ACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAAGGCCTGCTTTGGGTaGCCCTGCATCAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQKACFG*PCISFS
Trigger: ACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTCCAAGAATGGAGTTaGTACCTGCACACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLQEWS*YLHTQV
Trigger: AACCTGGGTGTGCAGGTAGCAACTCCATTCTTGGAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCAGCAGGGCCCTCACTaGCCAGAGCTGTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHQQGPH*PELSPR
Trigger: TCTTGGAGACAGCTCTGGGCAGTGAGGGCCCTGCTG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGAGCTGACTGGAATCTaGATACAGTTCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQELTGI*IQFGGD
Trigger: GTCACCACCGAACTGTATGCAGATTCCAGTCAGCTC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGTCACCTGACAGTTTaGGTTTCCTGTCTAGCCGGA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSCHLTV*VSCLAG
Trigger: TCCGGCTAGACAGGAAACGCAAACTGTCAGGTGACA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTGCAGCAAGTGGCGTTaGTTTTTAGGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQCSKWR*FLGWSP
Trigger: AGGGCTCCATCCTAAAAAGCAACGCCACTTGCTGCA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTGCAGCAAGTGGCGTTaGTTTTTAGGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFCSKWR*FLGWSP
Trigger: AGGGCTCCATCCTAAAAAGCAACGCCACTTGCTGCA...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCACCGTTCTCTAAGGTaGAGCAAGTGGCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHRSLR*SKWRCF
Trigger: AAAGCAACGCCACTTGCTGCACCTTAGAGAACGGTG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCACCGTTCTCTAAGGTaGAGCAAGTGGCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSHRSLR*SKWRCF
Trigger: AAAGCAACGCCACTTGCTGCACCTTAGAGAACGGTG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTCGGCTGCCGACACCTaGTGCTCCCACCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHSAADT*CSHRSL
Trigger: TAGAGAACGGTGGGAGCAGCAGGTGTCGGCAGCCGA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTTGCCGGCCAGGTTTaGTCTCGGCTGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHFAGQV*SRLPTP
Trigger: AGGTGTCGGCAGCCGAGAGCAAACCTGGCCGGCAAA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTACTTCCTTCCTGCTTTaGCGGCCAGGTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCTSFLL*RPGLLS
Trigger: CGAGAGCAAACCTGGCCGGCAAAGCAGGAAGGAAGT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACAGACCAGCCTCTGTTaGCTTTGGCCTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQQTSLC*LWPLPF
Trigger: AAAAGGCAGAGGCCAAAGGCAACAGAGGCTGGTCTG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACCTCGTCTTCCCCTGTaGACAGCACATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQPRLPL*TAHLSS
Trigger: AGAAGACAGATGTGCTGTGCACAGGGGAAGACGAGG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGTTCACACACAGAGCTaGCATAGAACTCCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQVHTQS*HRTPKR
Trigger: GCGCTTGGGAGTTCTATGGCAGCTCTGTGTGTGAAC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTCCTTCCATCTGCAATaGCCGCTGCTCTCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYSFHLQ*PLLSAE
Trigger: CTCAGCCGAGAGCAGCGGGCATTGCAGATGGAAGGA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065143.14
ENSMUST00000115513.9
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCCTCAGCTCCAGCCTaGCTTTTGAAGCGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPSAPA*LLKRRH
Trigger: ATGGCGACGCTTCAAAAGCCAGGCTGGAGCTGAGGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAAAGGGTATATGGCTaGAGTGGCCCCCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQERVYG*SGPLHV
Trigger: TACATGGAGGGGGCCACTCCAGCCATATACCCTTTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGACAGGAGAATACAGTaGCTGGGCCAAGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCDRRIQ*LGQAVG
Trigger: TCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCAGAGGCTGAAGGTGTaGAGAGCCTCATGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCQRLKV*RASWVK
Trigger: CTTCACCCATGAGGCTCTCCACACCTTCAGCCTCTG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTTTTGTCTGAGCAGTaGACGAGAGGTGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLLSEQ*TRGGMA
Trigger: GGCCATTCCACCTCTCGTCCACTGCTCAGACAAAAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTCTTCATTAGGACTTaGCCCTGGCACCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLFIRT*PWHHPG
Trigger: TCCTGGGTGGTGCCAGGGCCAAGTCCTAATGAAGAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCTGGGCGTCCTGAGCTaGACACGGACCCTGAAACAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYLGVLS*TRTLKH
Trigger: ATGTTTCAGGGTCCGTGTCCAGCTCAGGACGCCCAG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGTGCCATCTGCATTaGCGTTGGCGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWCHLH*RWRWGL
Trigger: CAGCCCCCAACGCCAACGCCAATGCAGATGGCACCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAGGCAGGCCAGGCTTTaGGGCAAGGTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHRQARL*GKVPRK
Trigger: TTTCCTGGGCACCTTGCCCCAAAGCCTGGCCTGCCT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGTGTGGGATCAACATaGGATGGACCATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCCVGST*DGPCPG
Trigger: GCCTGGGCATGGTCCATCCCATGTTGATCCCACACA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGTCAGTGGGGACTTCTaGATGCAGTTTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQVSGDF*MQFGAA
Trigger: AGCAGCACCAAACTGCATCCAGAAGTCCCCACTGAC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAATTCACGGCGTTGTTaGATCACAGGGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQNSRRC*ITGSAE
Trigger: CTCAGCTGACCCTGTGATCCAACAACGCCGTGAATT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACCGCCCACACAAAATaGTTTGGGATCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSTAHTK*FGILLG
Trigger: ACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGGAGTCTTTGGTTGCTaGGTGGCTACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQGVFGC*VATFSL
Trigger: GAGAGAGAAGGTAGCCACCCAGCAACCAAAGACTCC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAACACCTCGGAGTCTTTaGTTGCTGGGTGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQTPRSL*LLGGYL
Trigger: AAGGTAGCCACCCAGCAACCAAAGACTCCGAGGTGT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTACAGCGGTCTCAGTGTaGGTGCTGTCACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCTAVSV*VLSPDS
Trigger: ACTGTCAGGTGACAGCACCCACACTGAGACCGCTGT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGGCTGGCGTGCAGCTTaGCTGAGTCTGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYGWRAA*LSLLFA
Trigger: GGCAAAAAGCAGACTCAGCCAAGCTGCACGCCAGCC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCAGTCTCTTCCCGGATaGCTTCTCGATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQQSLPG*LLDVVC
Trigger: ACAGACAACATCGAGAAGCCATCCGGGAAGAGACTG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCAGTCTCTTCCCGGATaGCTTCTCGATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSQSLPG*LLDVVC
Trigger: ACAGACAACATCGAGAAGCCATCCGGGAAGAGACTG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTCTGCAAGCTCCTCCTaGACTCCTGAGGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQSASSS*TPEVSS
Trigger: ACTTGATACCTCAGGAGTCCAGGAGGAGCTTGCAGA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGGTCAAAGGGCTTTaGCTCCTGCTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYTVKGL*LLLGWW
Trigger: CCACCAGCCAAGCAGGAGCCAAAGCCCTTTGACCGT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATGGGGCGAGACTGGGTaGTCTCTTGAGGAGAATTTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQWGETG*SLEENL
Trigger: CAAATTCTCCTCAAGAGACCACCCAGTCTCGCCCCA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAAGTCTCCGAGCTTCTaGCGGCATGGGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHKSPSF*RHGARL
Trigger: CAGTCTCGCCCCATGCCGCCAGAAGCTCGGAGACTT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCATATTCAAGGAGGTaGCGCACGATGTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPYSRR*RTMLSH
Trigger: ATGGCTCAACATCGTGCGCCACCTCCTTGAATATGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCATATTCAAGGAGGTaGCGCACGATGTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPYSRR*RTMLSH
Trigger: ATGGCTCAACATCGTGCGCCACCTCCTTGAATATGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCCGTGTCACTAGGGTaGAGCCACTCCACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPVSLG*SHSTEE
Trigger: CTCCTCTGTGGAGTGGCTCCACCCTAGTGACACGGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTTCGTCAGGGTGACTaGGGGAGAGGTGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLRQGD*GRGGDP
Trigger: AGGATCTCCACCTCTCCCTCAGTCACCCTGACGAAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACATGGCTTCGTCAGGGTaGCTGAGGGAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHMASSG*LRERWR
Trigger: TCTCCACCTCTCCCTCAGTCACCCTGACGAAGCCAT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACCATCTTTTCTGTCTTaGACCGTTGTCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQPSFLS*TVVFRV
Trigger: CACCCGGAAGACAACGGTTCAAGACAGAAAAGATGG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGCACCACCCAGGATaGGGGAGCAGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWHHPG*GSSADD
Trigger: ATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGGTAACAAAACTGGGTaGGGATACACAGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFGNKTG*GYTGPL
Trigger: CAAAGGACCTGTGTATCCTCACCCAGTTTTGTTACC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTTCTCCTCTTTTGTaGTCTCAATGGGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQASPLL*SQWACV
Trigger: CACACACGCCCATTGAGATCACAAAAGAGGAGAAGC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTATTCATGGAAGTCAGTaGTTCGGCCCAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCIHGSQ*FGPAPL
Trigger: GAGAGGAGCTGGGCCGAATCACTGACTTCCATGAAT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTATCCTTGCCTAAGCTaGACACTGGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCYPCLS*TLAGLR
Trigger: CCTCAAGCCAGCCAGTGTTCAGCTTAGGCAAGGATA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTTTCATCTCCAACTCTaGGAAGCGCATCATTGCACG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQFHLQL*EAHHCT
Trigger: CGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTACTTGCATTGGTGGATaGAAGGCTCTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCTCIGG*KALHGR
Trigger: CCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCAGTTTCGTGGCCCCTaGGCGACAGACACTTGGATG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHQFRGP*ATDTWM
Trigger: CATCCAAGTGTCTGTCGCTCAGGGGCCACGAAACTG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACCGCCTCTGCAATGGTaGCAATTTCCAGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQPPLQW*QFPDWE
Trigger: TTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTCCATGCTCAGTGCTaGCAGGCCATCGATCCGATG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVHAQC*QAIDPM
Trigger: CATCGGATCGATGGCCTGGCAGCACTGAGCATGGAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTCGGAGTAGGTCTCTaGAGCGGGCTGAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLGVGL*SGLSWK
Trigger: CTTCCAACTCAGCCCGCTGCAGAGACCTACTCCGAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGAGCCTTGGGGTACTTaGCATTGGACAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYEPWGT*HWTAWM
Trigger: CATCCAGGCTGTCCAATGGCAAGTACCCCAAGGCTC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTATCCACCGAGCTCCTaGTGGTCTTGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYYPPSS*WSWCHL
Trigger: CAGATGGCACCAAGACCAGCAGGAGCTCGGTGGATA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCTAGGGTAGGGAATTaGTGGGGACCTGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPRVGN*WGPECF
Trigger: GAAGCATTCAGGTCCCCAGCAATTCCCTACCCTAGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGCCCAGGAAACAGACTaGCATTGGGTAACAAAACTG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSAQETD*HWVTKL
Trigger: CAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGGCTTTGGGGCAAGGTaGCCAGGAAACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHGFGAR*PGNRLP
Trigger: TGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATGCTTTGGGTGCCCCTaGATCAGTTTTAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQCFGCP*ISFSVC
Trigger: GCAGACACTAAAACTGATGCAGGGGCACCCAAAGCA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGGGTTTCAGAACTTTaGCATCGTTGGATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSWVSEL*HRWIRP
Trigger: AGGCCGAATCCAACGATGGCAAAGTTCTGAAACCCA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTTAGCAATTCTCTTTaGCAGCTTGGATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVSNSL*QLGWLG
Trigger: CCCAAGCCATCCAAGCTGGCAAAGAGAATTGCTAAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGTTAGCAATTCTCTTTaGCAGCTTGGATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSVSNSL*QLGWLG
Trigger: CCCAAGCCATCCAAGCTGGCAAAGAGAATTGCTAAC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCGGTCTCAGTGTGGGTaGTGTCACCTGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYRSQCG*CHLTVC
Trigger: GCAAACTGTCAGGTGACAGCACCCACACTGAGACCG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTCCTTCCTGCTTTaGCGGCCAGGTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYTSFLL*RPGLLS
Trigger: CGAGAGCAAACCTGGCCGGCAAAGCAGGAAGGAAGT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCAGACCAGCCTCTGTTaGCTTTGGCCTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCQTSLC*LWPLPF
Trigger: AAAAGGCAGAGGCCAAAGGCAACAGAGGCTGGTCTG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCTCGTCTTCCCCTGTaGACAGCACATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPRLPL*TAHLSS
Trigger: AGAAGACAGATGTGCTGTGCACAGGGGAAGACGAGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTTGTCTGTGTATTTTTaGAGCGGGGAGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLSVYF*SGEAAW
Trigger: CCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGCCACTGAGAGAGCTTaGGGTAGCCTCCCGACCTTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHATERA*GSLPTF
Trigger: AAAGGTCGGGAGGCTACCCCAAGCTCTCTCAGTGGC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGCTCTGTTTGTCACTaGCAGGCCTATCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGSVCH*QAYPNP
Trigger: TGGGTTTGGATAGGCCTGCCAGTGACAAACAGAGCC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGAAGCGTTCCCCACTaGTGCAGACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGSVPH*CRQENT
Trigger: TGTATTCTCCTGTCTGCACCAGTGGGGAACGCTTCC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGACATAGTGTGGGGGTaGCAGGTAGAGGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYDIVWG*QVEEAF
Trigger: GAACGCTTCCTCTACCTGCCACCCCCACACTATGTC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGAGAGCTGTGTCCCCTaGCAGGCCACTATTGACTGC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHESCVP*QATIDC
Trigger: GCAGTCAATAGTGGCCTGCCAGGGGACACAGCTCTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAGAGGTGGAGATCCTaGGATAGTGCTTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQERWRS*DSACGT
Trigger: AGTTCCACAAGCACTATCCCAGGATCTCCACCTCTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTGGGCGTCCTGAGCTaGACACGGACCCTGAAACAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLGVLS*TRTLKH
Trigger: ATGTTTCAGGGTCCGTGTCCAGCTCAGGACGCCCAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCATCTGCATTGGCGTTaGCGTTGGGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHHLHWR*RWGLVM
Trigger: CATCACCAGCCCCCAACGCCAACGCCAATGCAGATG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTTCTGGGTTGGCTTTaGCTCCCTTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVLGWL*LPCCWC
Trigger: GCACCAGCAGCAAGGGAGCCAAAGCCAACCCAGAAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCAGGGTAGGGAATTGCTaGGGACCTGAATGCTTCATT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSRVGNC*GPECFI
Trigger: AATGAAGCATTCAGGTCCCCAGCAATTCCCTACCCT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGGGTAGGGAATTGCTaGGGACCTGAATGCTTCATT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQRVGNC*GPECFI
Trigger: AATGAAGCATTCAGGTCCCCAGCAATTCCCTACCCT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTGTGTGGGATCAACATaGGATGGACCATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYCVGST*DGPCPG
Trigger: GCCTGGGCATGGTCCATCCCATGTTGATCCCACACA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTCAATGGGCGTGTGTaGGATCAACATGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLNGRV*DQHGMD
Trigger: GTCCATCCCATGTTGATCCCACACACGCCCATTGAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAAGCTGAACACTGGCTaGCTTGAGGCCTGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQKLNTG*LEACLK
Trigger: TTTCAAACAGGCCTCAAGCCAGCCAGTGTTCAGCTT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAACCGCCCACACAAAATaGTTTGGGATCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQTAHTK*FGILLG
Trigger: ACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGAACTTTGCCATCGTTaGATTCGGCCTCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSELCHR*IRPHQF
Trigger: GAACTGATGAGGCCGAATCCAACGATGGCAAAGTTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCAGCTTGGATGGCTTaGGTTTCAGAACTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSPAWMA*VSELCH
Trigger: ATGGCAAAGTTCTGAAACCCAAGCCATCCAAGCTGG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGAGTCTTTGGTTGCTaGGTGGCTACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGVFGC*VATFSL
Trigger: GAGAGAGAAGGTAGCCACCCAGCAACCAAAGACTCC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTACACCTCGGAGTCTTTaGTTGCTGGGTGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCTPRSL*LLGGYL
Trigger: AAGGTAGCCACCCAGCAACCAAAGACTCCGAGGTGT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCTTTCCCAGTCGGCTaGGCTGAATTTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPFPVG*AEFAHL
Trigger: GAGGTGTGCAAATTCAGCCCAGCCGACTGGGAAAGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTCTCACTGTCATTCTaGTCGGCAATGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLSLSF*SAMASS
Trigger: GGAAGAGGCCATTGCCGACCAGAATGACAGTGAGAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGGCTCACTCACAGGTaGCCTCTCCAAGAAATACTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSWLTHR*PLQEIL
Trigger: AAGTATTTCTTGGAGAGGCCACCTGTGAGTGAGCCA...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTAAGGTGCAGCAAGTaGCGTTGCTTTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLRCSK*RCFLGW
Trigger: CCATCCTAAAAAGCAACGCCACTTGCTGCACCTTAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTAAGGTGCAGCAAGTaGCGTTGCTTTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLRCSK*RCFLGW
Trigger: CCATCCTAAAAAGCAACGCCACTTGCTGCACCTTAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTAAGGTGCAGCAAGTaGCGTTGCTTTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLRCSK*RCFLGW
Trigger: CCATCCTAAAAAGCAACGCCACTTGCTGCACCTTAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACAGTCTCTTCCCGGATaGCTTCTCGATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQQSLPG*LLDVVC
Trigger: ACAGACAACATCGAGAAGCCATCCGGGAAGAGACTG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACACGGTCAAAGGGCTTTaGCTCCTGCTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHTVKGL*LLLGWW
Trigger: CCACCAGCCAAGCAGGAGCCAAAGCCCTTTGACCGT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATTTGAGCGTGGCAGCTaGGTGGCCTGGGTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKFERGS*VAWVAG
Trigger: ACCGGCCACCCAGGCCACCCAGCTGCCACGCTCAAA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCATCATGCAGAGGCCTaGTTCCATCCTGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHHHAEA*FHPGHC
Trigger: GCAGTGCCCAGGATGGAACCAGGCCTCTGCATGATG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATGGGTCTTCTGGTCCTaGGGGATTAGCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQWVFWS*GISQNI
Trigger: GATGTTTTGGCTAATCCCCCAGGACCAGAAGACCCA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTCCCGACCTTTTTCTaGGCCCAATCCACACAAGCC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLPTFF*AQSTQA
Trigger: GGCTTGTGTGGATTGGGCTCAGAAAAAGGTCGGGAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCATCTTTTCTGTCTTaGACCGTTGTCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPSFLS*TVVFRV
Trigger: CACCCGGAAGACAACGGTTCAAGACAGAAAAGATGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCGAATTGCTGGGGACCTaGATGCTTCATTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSELLGT*MLHLEI
Trigger: TATCTCCAAATGAAGCATTCAGGTCCCCAGCAATTC...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGAATTGCTGGGGACCTaGATGCTTCATTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFELLGT*MLHLEI
Trigger: TATCTCCAAATGAAGCATTCAGGTCCCCAGCAATTC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGCTTCTCCTCTTTTGTaGTCTCAATGGGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCASPLL*SQWACV
Trigger: CACACACGCCCATTGAGATCACAAAAGAGGAGAAGC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCAGTTTGTCGCTTTTaGCCCCAGTCTTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPVCRF*PQSSLD
Trigger: ATCAAGGGAAGACTGGGGTCAAAAGCGACAAACTGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTATCCTTGCCTAAGCTaGACACTGGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYYPCLS*TLAGLR
Trigger: CCTCAAGCCAGCCAGTGTTCAGCTTAGGCAAGGATA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGGCCTCTTCCAGGGTaGCTGACTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCWPLPG*LTLASF
Trigger: AAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTGCATTGGTGGATaGAAGGCTCTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYTCIGG*KALHGR
Trigger: CCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGACTGGGTGGTCTCTTaGGGAGAATTTGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHDWVVS*GEFERG
Trigger: GCCACGCTCAAATTCTCCTCAAGAGACCACCCAGTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCATGATGGTTCTCCCTaGGTATGTGGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCHDGSP*VCGQSR
Trigger: CCTACTTTGGCCACATACTCAGGGAGAACCATCATG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCGCCTCTGCAATGGTaGCAATTTCCAGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPPLQW*QFPDWE
Trigger: TTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGCGGTCCATGCTCAGTaGTGCCAGGCCATCGATCCG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKAVHAQ*CQAIDP
Trigger: CGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCTAGGGTAGGGAATTaGTGGGGACCTGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPRVGN*WGPECF
Trigger: GAAGCATTCAGGTCCCCAGCAATTCCCTACCCTAGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCCAGGAAACAGACTaGCATTGGGTAACAAAACTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQAQETD*HWVTKL
Trigger: CAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTGGGGACTTCTGGATaGAGTTTGGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVGTSG*SLVLLA
Trigger: AGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGCTTTGGGTGCCCCTaGATCAGTTTTAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCCFGCP*ISFSVC
Trigger: GCAGACACTAAAACTGATGCAGGGGCACCCAAAGCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAATGGAGTTGCTACCTaGACACCCAGGTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQNGVAT*TPRFSL
Trigger: CAAAGAGAACCTGGGTGTGCAGGTAGCAACTCCATT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTCCAAGAATGGAGTTaGTACCTGCACACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLQEWS*YLHTQV
Trigger: AACCTGGGTGTGCAGGTAGCAACTCCATTCTTGGAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGTTAGCAATTCTCTTTaGCAGCTTGGATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQVSNSL*QLGWLG
Trigger: CCCAAGCCATCCAAGCTGGCAAAGAGAATTGCTAAC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGAGCTGACTGGAATCTaGATACAGTTCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCELTGI*IQFGGD
Trigger: GTCACCACCGAACTGTATGCAGATTCCAGTCAGCTC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCTCGGAGTCTTTGGTTaGTGGGTGGCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYLGVFG*WVATFS
Trigger: AGAGAAGGTAGCCACCCAGCAACCAAAGACTCCGAG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGCAGCAAGTGGCGTTaGTTTTTAGGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCCSKWR*FLGWSP
Trigger: AGGGCTCCATCCTAAAAAGCAACGCCACTTGCTGCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTTGCCTTTGGCCTCTaGCTTTTTCCTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVAFGL*LFPARL
Trigger: AAGCCTGGCAGGAAAAAGGCAGAGGCCAAAGGCAAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCTGAGTCTGCTTTTTaGCACTTGCATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQAESAF*HLHWWM
Trigger: CATCCACCAATGCAAGTGGCAAAAAGCAGACTCAGC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTTGTCTGTGTATTTTTaGAGCGGGGAGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYLSVYF*SGEAAW
Trigger: CCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTTCACACACAGAGCTaGCATAGAACTCCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVHTQS*HRTPKR
Trigger: GCGCTTGGGAGTTCTATGGCAGCTCTGTGTGTGAAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTAAAACTCCGCCTCTaGAATGGTGACAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVKLRL*NGDNFQ
Trigger: CTGGAAATTGTCACCATTGCAGAGGCGGAGTTTTAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTGTAAAACTCCGCCTCTaGAATGGTGACAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFVKLRL*NGDNFQ
Trigger: CTGGAAATTGTCACCATTGCAGAGGCGGAGTTTTAC...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGGCTCTGTTTGTCACTaGCAGGCCTATCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYGSVCH*QAYPNP
Trigger: TGGGTTTGGATAGGCCTGCCAGTGACAAACAGAGCC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGACAGGAGAATACAGTaGCTGGGCCAAGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHDRRIQ*LGQAVG
Trigger: TCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGAGAGGTGGAGATCCTaGGATAGTGCTTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCERWRS*DSACGT
Trigger: AGTTCCACAAGCACTATCCCAGGATCTCCACCTCTC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACGTGCTTGGCAGGCGTaGATGAGGGCTGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKRAWQA*MRAGPH
Trigger: ATGTGGGCCAGCCCTCATCCACGCCTGCCAAGCACG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTCAGTGGGGACTTCTaGATGCAGTTTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVSGDF*MQFGAA
Trigger: AGCAGCACCAAACTGCATCCAGAAGTCCCCACTGAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAAGCTGAACACTGGCTaGCTTGAGGCCTGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQKLNTG*LEACLK
Trigger: TTTCAAACAGGCCTCAAGCCAGCCAGTGTTCAGCTT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAACTTTGCCATCGTTaGATTCGGCCTCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQELCHR*IRPHQF
Trigger: GAACTGATGAGGCCGAATCCAACGATGGCAAAGTTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTTTGCCAGCTTGGATaGCTTGGGTTTCAGAACTTT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLCQLG*LGFQNF
Trigger: AAAGTTCTGAAACCCAAGCCATCCAAGCTGGCAAAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACACCTCGGAGTCTTTaGTTGCTGGGTGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYTPRSL*LLGGYL
Trigger: AAGGTAGCCACCCAGCAACCAAAGACTCCGAGGTGT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACACAGCGGTCTCAGTGTaGGTGCTGTCACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHTAVSV*VLSPDS
Trigger: ACTGTCAGGTGACAGCACCCACACTGAGACCGCTGT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAGCGGGGAGGCAGCCTaGCAATCCTCGTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKSGEAA*QSSSSP
Trigger: AGGGGAAGACGAGGATTGCCAGGCTGCCTCCCCGCT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCAGTCTCTTCCCGGATaGCTTCTCGATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCQSLPG*LLDVVC
Trigger: ACAGACAACATCGAGAAGCCATCCGGGAAGAGACTG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGCTTTGGCTCCTGCTTaGCTGGTGGTGACAAATCGT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYALAPA*LVVTNR
Trigger: ACGATTTGTCACCACCAGCCAAGCAGGAGCCAAAGC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTGGGGCGAGACTGGGTaGTCTCTTGAGGAGAATTTG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYWGETG*SLEENL
Trigger: CAAATTCTCCTCAAGAGACCACCCAGTCTCGCCCCA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGGGTCTTCTGGTCCTaGGGGATTAGCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCWVFWS*GISQNI
Trigger: GATGTTTTGGCTAATCCCCCAGGACCAGAAGACCCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACAGGCTTCCAGGTCTTTaGGGCAGGAGAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYRLPGL*GRRTRD
Trigger: GTCTCTTGTTCTCCTGCCCCAAAGACCTGGAAGCCT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTGTTCATCCAGCTGTaGACGTTCCCATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLFIQL*TFPYRG
Trigger: CCCTCTGTATGGGAACGTTCACAGCTGGATGAACAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGTATCCACCACGCTGTaGCTCAGGGGAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKVSTTL*LRGVSS
Trigger: GGAGGAGACTCCCCTGAGTCACAGCGTGGTGGATAC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACGGGAGTATTCGGTTTaGATTGCATCTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQREYSV*IASLDF
Trigger: GAAATCCAGAGATGCAATTCAAACCGAATACTCCCG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTGGGTTCCCAGGGTTaGCGCCCATCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLGSQG*RPSSMG
Trigger: TCCCATGGAAGATGGGCGTCAACCCTGGGAACCCAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATGCCCAGGCATGGATTaGGCACAGTCGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKCPGMD*AQSPPS
Trigger: AGATGGGGGCGACTGTGCTCAATCCATGCCTGGGCA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTCCAACAGAGGTGGTaGGCCCCCATCTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHFQQRW*APIFSV
Trigger: GACAGAAAAGATGGGGGCTCACCACCTCTGTTGGAA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGAATTGCTGGGGACCTaGATGCTTCATTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQELLGT*MLHLEI
Trigger: TATCTCCAAATGAAGCATTCAGGTCCCCAGCAATTC...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGGTAACAAAACTGGGTaGGGATACACAGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCGNKTG*GYTGPL
Trigger: CAAAGGACCTGTGTATCCTCACCCAGTTTTGTTACC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTGGCCTCTTCCAGGGTaGCTGACTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYWPLPG*LTLASF
Trigger: AAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACACTTGCATTGGTGGATaGAAGGCTCTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHTCIGG*KALHGR
Trigger: CCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTGCTTGGCTGGTGGTaGCAAATCGTAGTCCGAACT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLLGWW*QIVVRT
Trigger: AGTTCGGACTACGATTTGTCACCACCAGCCAAGCAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCATTGTCTCGATGATTaGCATCACAGACCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHCLDD*HHRPCS
Trigger: AGAACAAGGTCTGTGATGTCAATCATCGAGACAATG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCATTGTCTCGATGATTaGCATCACAGACCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHCLDD*HHRPCS
Trigger: AGAACAAGGTCTGTGATGTCAATCATCGAGACAATG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCTGGGCACTGCAGTTaGCATCAGCGCCATATTCAA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPGHCS*HQRHIQ
Trigger: TTGAATATGGCGCTGATGTCAACTGCAGTGCCCAGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTACATTTTCAACTTCTTaGGCACGTCTGAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFTFSTS*ARLRAE
Trigger: TTCTGCTCTCAGACGTGCTCAAGAAGTTGAAAATGT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGACATTTTCAACTTCTTaGGCACGTCTGAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQTFSTS*ARLRAE
Trigger: TTCTGCTCTCAGACGTGCTCAAGAAGTTGAAAATGT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCACTTGTTCCACACATaGGGACCCTCTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHHLFHT*GPSRCS
Trigger: TGAACAGCGAGAGGGTCCGCATGTGTGGAACAAGTG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCTAGGGTAGGGAATTaGTGGGGACCTGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPRVGN*WGPECF
Trigger: GAAGCATTCAGGTCCCCAGCAATTCCCTACCCTAGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGATGCCTTCTGGTGCTaGGTAAGGGAGGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHDAFWC*VREVTP
Trigger: AGGAGTTACCTCCCTTACGCAGCACCAGAAGGCATC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTGGGGACTTCTGGATaGAGTTTGGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVGTSG*SLVLLA
Trigger: AGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTATCAGTTTTAGTGTCTaGTTCTTCTCGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFISFSV*FFSEKV
Trigger: GACCTTCTCCGAGAAGAAGCAGACACTAAAACTGAT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGATCAGTTTTAGTGTCTaGTTCTTCTCGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQISFSV*FFSEKV
Trigger: GACCTTCTCCGAGAAGAAGCAGACACTAAAACTGAT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACAGCAGGGCCCTCACTaGCCAGAGCTGTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKQQGPH*PELSPR
Trigger: TCTTGGAGACAGCTCTGGGCAGTGAGGGCCCTGCTG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTCGGAGTCTTTGGTTaGTGGGTGGCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLGVFG*WVATFS
Trigger: AGAGAAGGTAGCCACCCAGCAACCAAAGACTCCGAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCACCGTTCTCTAAGGTaGAGCAAGTGGCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYHRSLR*SKWRCF
Trigger: AAAGCAACGCCACTTGCTGCACCTTAGAGAACGGTG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATCGGCTGCCGACACCTaGTGCTCCCACCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKSAADT*CSHRSL
Trigger: TAGAGAACGGTGGGAGCAGCAGGTGTCGGCAGCCGA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATTTGCCGGCCAGGTTTaGTCTCGGCTGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKFAGQV*SRLPTP
Trigger: AGGTGTCGGCAGCCGAGAGCAAACCTGGCCGGCAAA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGGCCACTTCCTTCCTaGTTTGCCGGCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGPLPS*FAGQVC
Trigger: GCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGGCCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTTGCCTTTGGCCTCTaGCTTTTTCCTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVAFGL*LFPARL
Trigger: AAGCCTGGCAGGAAAAAGGCAGAGGCCAAAGGCAAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCAGACCAGCCTCTGTTaGCTTTGGCCTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHQTSLC*LWPLPF
Trigger: AAAAGGCAGAGGCCAAAGGCAACAGAGGCTGGTCTG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTGTCTGTGTATTTTTaGAGCGGGGAGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLSVYF*SGEAAW
Trigger: CCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTTCACACACAGAGCTaGCATAGAACTCCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVHTQS*HRTPKR
Trigger: GCGCTTGGGAGTTCTATGGCAGCTCTGTGTGTGAAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGGCTCTGTTTGTCACTaGCAGGCCTATCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHGSVCH*QAYPNP
Trigger: TGGGTTTGGATAGGCCTGCCAGTGACAAACAGAGCC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGAAAGGGTATATGGCTaGAGTGGCCCCCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHERVYG*SGPLHV
Trigger: TACATGGAGGGGGCCACTCCAGCCATATACCCTTTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGACGAGAGGTGGAATaGCCGCAGAGGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGREVE*PQRLKV
Trigger: CACCTTCAGCCTCTGCGGCCATTCCACCTCTCGTCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTTTTGTCTGAGCAGTaGACGAGAGGTGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLLSEQ*TRGGMA
Trigger: GGCCATTCCACCTCTCGTCCACTGCTCAGACAAAAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGAGAGGTGGAGATCCTaGGATAGTGCTTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYERWRS*DSACGT
Trigger: AGTTCCACAAGCACTATCCCAGGATCTCCACCTCTC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCCCATCTAGAGCCTTaGGGTACTTGCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPHLEP*GTCHWT
Trigger: TGTCCAATGGCAAGTACCCCAAGGCTCTAGATGGGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACATTGGCGTTGGCGTTaGGGGCTGGTGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKHWRWR*GLVMQR
Trigger: CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGGATCAACATGGGATaGACCATGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGINMG*TMPRPR
Trigger: CCTGGGCCTGGGCATGGTCCATCCCATGTTGATCCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCGGCTACGGAGGGTTaGGTCCTCATAACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPATEG*VLITGS
Trigger: AGAGCCCGTTATGAGGACCCAACCCTCCGTAGCCGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCATTCCAGCTAGAGTTTaGCTTCAGGTTCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSIPARV*LQVLVS
Trigger: ACTGACAAGAACCTGAAGCCAAACTCTAGCTGGAAT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTACAAGGCCTGCTTTaGGTGCCCCTGCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLQGLL*VPLHQF
Trigger: AAACTGATGCAGGGGCACCCAAAGCAGGCCTTGTAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACAATTCACGGCGTTGTTaGATCACAGGGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYNSRRC*ITGSAE
Trigger: CTCAGCTGACCCTGTGATCCAACAACGCCGTGAATT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAAAGTGAAAGATTCATaGAAGTCAGTGATTCGGCCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFKVKDS*KSVIRP
Trigger: GGGCCGAATCACTGACTTCCATGAATCTTTCACTTT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCAAAGTGAAAGATTCATaGAAGTCAGTGATTCGGCCC +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSKVKDS*KSVIRP
Trigger: GGGCCGAATCACTGACTTCCATGAATCTTTCACTTT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCCACACAAAATGGTTTaGGATCCTCTTGGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQPHKMV*DPLGFY
Trigger: GTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCCACACAAAATGGTTTaGGATCCTCTTGGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFPHKMV*DPLGFY
Trigger: GTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCAGCTTGGATGGCTTaGGTTTCAGAACTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPAWMA*VSELCH
Trigger: ATGGCAAAGTTCTGAAACCCAAGCCATCCAAGCTGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCAAGATCTTTGTCCTCTaGGGCTTCAAAGAGATCATG +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSKIFVL*GFKEIM
Trigger: CATGATCTCTTTGAAGCCCCAGAGGACAAAGATCTT...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTGGCTCACTCACAGGTaGCCTCTCCAAGAAATACTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCWLTHR*PLQEIL
Trigger: AAGTATTTCTTGGAGAGGCCACCTGTGAGTGAGCCA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACATGAAAGGCTCTTCATaGGCGGAGAGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHMKGSS*AESLRA
Trigger: TGCTCTCAGGCTCTCCGCCCATGAAGAGCCTTTCAT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTCTGCAAGCTCCTCCTaGACTCCTGAGGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYSASSS*TPEVSS
Trigger: ACTTGATACCTCAGGAGTCCAGGAGGAGCTTGCAGA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGGGCGAGACTGGGTaGTCTCTTGAGGAGAATTTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWGETG*SLEENL
Trigger: CAAATTCTCCTCAAGAGACCACCCAGTCTCGCCCCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCCATATTCAAGGAGGTaGCGCACGATGTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYPYSRR*RTMLSH
Trigger: ATGGCTCAACATCGTGCGCCACCTCCTTGAATATGG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCCGTGTCACTAGGGTaGAGCCACTCCACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPVSLG*SHSTEE
Trigger: CTCCTCTGTGGAGTGGCTCCACCCTAGTGACACGGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCGGGAGTATTCGGTTTaGATTGCATCTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCREYSV*IASLDF
Trigger: GAAATCCAGAGATGCAATTCAAACCGAATACTCCCG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAGGGGATGTGAGGGTTaGCATAGTGTGGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKRGCEG*HSVGVA
Trigger: TGCCACCCCCACACTATGTCAACCCTCACATCCCCT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCATCTTTTCTGTCTTaGACCGTTGTCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPSFLS*TVVFRV
Trigger: CACCCGGAAGACAACGGTTCAAGACAGAAAAGATGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAGTGCTGATGATCTCTaGTCTATAGATAGAACATCC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFSADDL*SIDRTS
Trigger: GGATGTTCTATCTATAGATCAGAGATCATCAGCACT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGTGCTGATGATCTCTaGTCTATAGATAGAACATCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQSADDL*SIDRTS
Trigger: GGATGTTCTATCTATAGATCAGAGATCATCAGCACT...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGGTAACAAAACTGGGTaGGGATACACAGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYGNKTG*GYTGPL
Trigger: CAAAGGACCTGTGTATCCTCACCCAGTTTTGTTACC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGCTTCTCCTCTTTTGTaGTCTCAATGGGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHASPLL*SQWACV
Trigger: CACACACGCCCATTGAGATCACAAAAGAGGAGAAGC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTTTCATCTCCAACTCTaGGAAGCGCATCATTGCACG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYFHLQL*EAHHCT
Trigger: CGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGTTTGGCTTCTTTTCCTaGTTTCCTTTCAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQFGFFS*FPFNLS
Trigger: GGAAAGGTTGAAAGGAAATCAGGAAAAGAAGCCAAA...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTCTTCCAGGGTGACTaGCTTTGGCTTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLFQGD*LWLLFL
Trigger: CAGGAAAAGAAGCCAAAGTCAGTCACCCTGGAAGAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGCCTCTTCCAGGGTaGCTGACTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWPLPG*LTLASF
Trigger: AAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGAGGTGACCTCAGGCTaGACAGCCTGGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLEVTSG*TAWATS
Trigger: GGAAGTGGCCCAGGCTGTTCAGCCTGAGGTCACCTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACATGGGCGGAGAGCCTaGGAGCACAGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLHGRRA*EHRQAL
Trigger: CAAGGCTTGCCTGTGCTCTCAGGCTCTCCGCCCATG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACATTGTCTCGATGATTaGCATCACAGACCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQHCLDD*HHRPCS
Trigger: AGAACAAGGTCTGTGATGTCAATCATCGAGACAATG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCATGATGGTTCTCCCTaGGTATGTGGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHHDGSP*VCGQSR
Trigger: CCTACTTTGGCCACATACTCAGGGAGAACCATCATG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACAGTTTCGTGGCCCCTaGGCGACAGACACTTGGATG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKQFRGP*ATDTWM
Trigger: CATCCAAGTGTCTGTCGCTCAGGGGCCACGAAACTG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCGCCTCTGCAATGGTaGCAATTTCCAGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPPLQW*QFPDWE
Trigger: TTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGCGGTCCATGCTCAGTaGTGCCAGGCCATCGATCCG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLAVHAQ*CQAIDP
Trigger: CGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGCCTGTGCGGTCCATaGTCAGTGCTGCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGLCGP*SVLPGH
Trigger: ATGGCCTGGCAGCACTGAGCATGGACCGCACAGGCC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGCCCAGGAAACAGACTaGCATTGGGTAACAAAACTG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYAQETD*HWVTKL
Trigger: CAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGCTTTGGGGCAAGGTaGCCAGGAAACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGFGAR*PGNRLP
Trigger: TGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAATCAGTTTTAGTGTCTaGTTCTTCTCGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQISFSV*FFSEKV
Trigger: GACCTTCTCCGAGAAGAAGCAGACACTAAAACTGAT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGCTTTGGGTGCCCCTaGATCAGTTTTAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHCFGCP*ISFSVC
Trigger: GCAGACACTAAAACTGATGCAGGGGCACCCAAAGCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAAGGCCTGCTTTGGGTaGCCCTGCATCAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHKACFG*PCISFS
Trigger: ACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTGGGTTTCAGAACTTTaGCATCGTTGGATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYWVSEL*HRWIRP
Trigger: AGGCCGAATCCAACGATGGCAAAGTTCTGAAACCCA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGAGCTGACTGGAATCTaGATACAGTTCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHELTGI*IQFGGD
Trigger: GTCACCACCGAACTGTATGCAGATTCCAGTCAGCTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCATGTTTGTTTCCAGTaGTATACTCACATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQHVCFQ*YTHISH
Trigger: GTGAGAGATGTGAGTATAGCACTGGAAACAAACATG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCATGTTTGTTTCCAGTaGTATACTCACATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFHVCFQ*YTHISH
Trigger: GTGAGAGATGTGAGTATAGCACTGGAAACAAACATG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGCAGCAAGTGGCGTTaGTTTTTAGGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHCSKWR*FLGWSP
Trigger: AGGGCTCCATCCTAAAAAGCAACGCCACTTGCTGCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGCTGAGTCTGCTTTTTaGCACTTGCATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYAESAF*HLHWWM
Trigger: CATCCACCAATGCAAGTGGCAAAAAGCAGACTCAGC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCTTTCTTTAATTTTCTaGTGTTTGGCAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSLSLIF*CLAGSL
Trigger: AAGGCTGCCTGCCAAACAGCAGAAAATTAAAGAAAG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCTTTCTTTAATTTTCTaGTGTTTGGCAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQLSLIF*CLAGSL
Trigger: AAGGCTGCCTGCCAAACAGCAGAAAATTAAAGAAAG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCCTCAGCTCCAGCCTaGCTTTTGAAGCGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPSAPA*LLKRRH
Trigger: ATGGCGACGCTTCAAAAGCCAGGCTGGAGCTGAGGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATCCGATGGGCTCCACTaGTATCCACCACGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKSDGLH*YPPRCD
Trigger: GTCACAGCGTGGTGGATACCAGTGGAGCCCATCGGA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGAGAGGTGGAGATCCTaGGATAGTGCTTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHERWRS*DSACGT
Trigger: AGTTCCACAAGCACTATCCCAGGATCTCCACCTCTC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTAGAAGACAGGTCAAGTaGTTTGTCTGTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRRQVK*FVCDIF
Trigger: AAAGATGTCACAGACAAACCACTTGACCTGTCTTCT...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGTTCTGGGTTGGCTTTaGCTCCCTTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKVLGWL*LPCCWC
Trigger: GCACCAGCAGCAAGGGAGCCAAAGCCAACCCAGAAC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGTCAGCTGAGGGCTTaGTGGCCTCGGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGQLRA*WPRCPD
Trigger: GTCAGGACACCGAGGCCACCAAGCCCTCAGCTGACC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAATTCACGGCGTTGTTaGATCACAGGGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHNSRRC*ITGSAE
Trigger: CTCAGCTGACCCTGTGATCCAACAACGCCGTGAATT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACACCGCCCACACAAAATaGTTTGGGATCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHTAHTK*FGILLG
Trigger: ACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCTTTGCCAGCTTGGATaGCTTGGGTTTCAGAACTTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCLCQLG*LGFQNF
Trigger: AAAGTTCTGAAACCCAAGCCATCCAAGCTGGCAAAG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGTGTCCACCACCCCCTaGTCACTGGGTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLVSTTP*SLGGSL
Trigger: GAGTGAGCCACCCAGTGACCAGGGGGTGGTGGACAC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATTTTGCCACTTGCATTaGTGGATGAAAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQFCHLH*WMKGSS
Trigger: TGAAGAGCCTTTCATCCACCAATGCAAGTGGCAAAA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGCTGGCGTGCAGCTTaGCTGAGTCTGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGWRAA*LSLLFA
Trigger: GGCAAAAAGCAGACTCAGCCAAGCTGCACGCCAGCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTCTGCAAGCTCCTCCTaGACTCCTGAGGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHSASSS*TPEVSS
Trigger: ACTTGATACCTCAGGAGTCCAGGAGGAGCTTGCAGA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCATATTCAAGGAGGTaGCGCACGATGTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPYSRR*RTMLSH
Trigger: ATGGCTCAACATCGTGCGCCACCTCCTTGAATATGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACATCATGCAGAGGCCTaGTTCCATCCTGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKHHAEA*FHPGHC
Trigger: GCAGTGCCCAGGATGGAACCAGGCCTCTGCATGATG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCCGTACAATTTCTAAGTaGTCATTCTCCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: HTIHPWPATRALYEITPSRTISK*SFSTAS
Trigger: TGATGCTGTGGAGAATGACCACTTAGAAATTGTACG...GCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCGTACAATTTCTAAGTaGTCATTCTCCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFRTISK*SFSTAS
Trigger: TGATGCTGTGGAGAATGACCACTTAGAAATTGTACG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGCGTTGCTTTTTAGGATaGAGCCCTGTTAATTCAATG +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQRCFLG*SPVNSM
Trigger: CATTGAATTAACAGGGCTCCATCCTAAAAAGCAACG...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115512.9
ENSMUST00000115513.9
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCGGGAGTATTCGGTTTaGATTGCATCTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYREYSV*IASLDF
Trigger: GAAATCCAGAGATGCAATTCAAACCGAATACTCCCG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTCTTGTACATATTCAGTaGATACTTATTTGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: HGPPPELCMKLRQAQSSFLVHIQ*ILIWRV
Trigger: GACTCGCCAAATAAGTATTCACTGAATATGTACAAG...AAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTGGGTTCCCAGGGTTaGCGCCCATCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLGSQG*RPSSMG
Trigger: TCCCATGGAAGATGGGCGTCAACCCTGGGAACCCAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAGTGCTGATGATCTCTaGTCTATAGATAGAACATCC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQSADDL*SIDRTS
Trigger: GGATGTTCTATCTATAGATCAGAGATCATCAGCACT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGGTAACAAAACTGGGTaGGGATACACAGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHGNKTG*GYTGPL
Trigger: CAAAGGACCTGTGTATCCTCACCCAGTTTTGTTACC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAATTTGGCTTCTTTTCCTaGTTTCCTTTCAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQFGFFS*FPFNLS
Trigger: GGAAAGGTTGAAAGGAAATCAGGAAAAGAAGCCAAA...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCATTGTCTCGATGATTaGCATCACAGACCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCHCLDD*HHRPCS
Trigger: AGAACAAGGTCTGTGATGTCAATCATCGAGACAATG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAGCACAGGTATTCGGTTTGAATTaGATCTCTGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QYTHGPPPELCMKLRQAQVFGLN*ISGFLS
Trigger: GGAAAGAAATCCAGAGATGCAATTCAAACCGAATAC...CTGTGCTTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGAGCCTTGGGGTACTTaGCATTGGACAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKEPWGT*HWTAWM
Trigger: CATCCAGGCTGTCCAATGGCAAGTACCCCAAGGCTC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACATCTGTGCCACCCATaGGGGGACACGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLHLCHP*GDTRNS
Trigger: GGAGTTCCTCGTGTCCCCGCATGGGTGGCACAGATG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAATGGAGTTGCTACCTaGACACCCAGGTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHNGVAT*TPRFSL
Trigger: CAAAGAGAACCTGGGTGTGCAGGTAGCAACTCCATT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGGTTTCAGAACTTTaGCATCGTTGGATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWVSEL*HRWIRP
Trigger: AGGCCGAATCCAACGATGGCAAAGTTCTGAAACCCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACGCATCATTGCACGCTaGAATGCCCGCTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLRIIAR*NARCSR
Trigger: CCGAGAGCAGCGGGCATTGCAGCGTGCAATGATGCG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043441.13
ENSMUST00000115512.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACATGTTTGTTTCCAGTaGTATACTCACATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQHVCFQ*YTHISH
Trigger: GTGAGAGATGTGAGTATAGCACTGGAAACAAACATG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACGGTCTCAGTGTGGGTaGTGTCACCTGACAGTTTGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKRSQCG*CHLTVC
Trigger: GCAAACTGTCAGGTGACAGCACCCACACTGAGACCG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGGCCACTTCCTTCCTaGTTTGCCGGCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGPLPS*FAGQVC
Trigger: GCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGGCCC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGCTGAGTCTGCTTTTTaGCACTTGCATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHAESAF*HLHWWM
Trigger: CATCCACCAATGCAAGTGGCAAAAAGCAGACTCAGC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGCCTTGAGGCTGGCGTaGAGCTTGGCTGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLALRLA*SLAESA
Trigger: AGCAGACTCAGCCAAGCTGCACGCCAGCCTCAAGGC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTTTCTTTAATTTTCTaGTGTTTGGCAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLSLIF*CLAGSL
Trigger: AAGGCTGCCTGCCAAACAGCAGAAAATTAAAGAAAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGACGAGAGGTGGAATaGCCGCAGAGGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGREVE*PQRLKV
Trigger: CACCTTCAGCCTCTGCGGCCATTCCACCTCTCGTCC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAAAGAAGACAGGTCAAGTaGTTTGTCTGTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQRRQVK*FVCDIF
Trigger: AAAGATGTCACAGACAAACCACTTGACCTGTCTTCT...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTCTTCATTAGGACTTaGCCCTGGCACCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLFIRT*PWHHPG
Trigger: TCCTGGGTGGTGCCAGGGCCAAGTCCTAATGAAGAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACATTGGCGTTGGCGTTaGGGGCTGGTGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLHWRWR*GLVMQR
Trigger: CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATGGTGCCATCTGCATTaGCGTTGGCGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLWCHLH*RWRWGL
Trigger: CAGCCCCCAACGCCAACGCCAATGCAGATGGCACCA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAGGGTAGGGAATTGCTaGGGACCTGAATGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHRVGNC*GPECFI
Trigger: AATGAAGCATTCAGGTCCCCAGCAATTCCCTACCCT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAAGGCAGGCCAGGCTTTaGGGCAAGGTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLRQARL*GKVPRK
Trigger: TTTCCTGGGCACCTTGCCCCAAAGCCTGGCCTGCCT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATGTGTGGGATCAACATaGGATGGACCATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKCVGST*DGPCPG
Trigger: GCCTGGGCATGGTCCATCCCATGTTGATCCCACACA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACAGCTGAGGGCTTGGTaGCCTCGGTGTCCTGACCTA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLQLRAW*PRCPDL
Trigger: TAGGTCAGGACACCGAGGCCACCAAGCCCTCAGCTG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAAGTGAAAGATTCATaGAAGTCAGTGATTCGGCCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCKVKDS*KSVIRP
Trigger: GGGCCGAATCACTGACTTCCATGAATCTTTCACTTT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAAGCTGAACACTGGCTaGCTTGAGGCCTGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHKLNTG*LEACLK
Trigger: TTTCAAACAGGCCTCAAGCCAGCCAGTGTTCAGCTT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCCACACAAAATGGTTTaGGATCCTCTTGGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCPHKMV*DPLGFY
Trigger: GTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCCAGCTTGGATGGCTTaGGTTTCAGAACTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHPAWMA*VSELCH
Trigger: ATGGCAAAGTTCTGAAACCCAAGCCATCCAAGCTGG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCTTTCCCAGTCGGCTaGGCTGAATTTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPFPVG*AEFAHL
Trigger: GAGGTGTGCAAATTCAGCCCAGCCGACTGGGAAAGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAGATCTTTGTCCTCTaGGGCTTCAAAGAGATCATG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCKIFVL*GFKEIM
Trigger: CATGATCTCTTTGAAGCCCCAGAGGACAAAGATCTT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTGGCTCACTCACAGGTaGCCTCTCCAAGAAATACTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHWLTHR*PLQEIL
Trigger: AAGTATTTCTTGGAGAGGCCACCTGTGAGTGAGCCA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGCCTGGTTCCATCCTaGGCACTGCAGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGLVPS*ALQLTS
Trigger: TGATGTCAACTGCAGTGCCCAGGATGGAACCAGGCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTGTTCATCCAGCTGTaGACGTTCCCATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLFIQL*TFPYRG
Trigger: CCCTCTGTATGGGAACGTTCACAGCTGGATGAACAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp ACCACACAATACACCCATGGCCCGCCACCAGAGCTTTGTATGAAATTACGCCAACTTGTACATATTCAGTaGATACTTATTTGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: TTQYTHGPPPELCMKLRQLVHIQ*ILIWRV
Trigger: GACTCGCCAAATAAGTATTCACTGAATATGTACAAG...TTGGCGTAATTTCATACAAAGCTCTGGTGGCGGGCCATGGGTGTATTGTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTTCGTCAGGGTGACTaGGGGAGAGGTGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLRQGD*GRGGDP
Trigger: AGGATCTCCACCTCTCCCTCAGTCACCCTGACGAAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAATGGCTTCGTCAGGGTaGCTGAGGGAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLMASSG*LRERWR
Trigger: TCTCCACCTCTCCCTCAGTCACCCTGACGAAGCCAT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATTCCAACAGAGGTGGTaGGCCCCCATCTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKFQQRW*APIFSV
Trigger: GACAGAAAAGATGGGGGCTCACCACCTCTGTTGGAA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAGCCTTGTTTTTCAGTaGCAGACTTTTGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCSLVFQ*QTFAIV
Trigger: AACAATGGCAAAAGTCTGTCACTGAAAAACAAGGCT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAACCCCAGTCTTCCCTTaGTTCCAGCTAGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKTPVFP*FQLEFG
Trigger: GCCAAACTCTAGCTGGAATCAAGGGAAGACTGGGGT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATATCCTTGCCTAAGCTaGACACTGGCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKYPCLS*TLAGLR
Trigger: CCTCAAGCCAGCCAGTGTTCAGCTTAGGCAAGGATA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTTTTGGCTTCTTTTCCTaGTTTCCTTTCAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCFGFFS*FPFNLS
Trigger: GGAAAGGTTGAAAGGAAATCAGGAAAAGAAGCCAAA...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCTGGGCACTGCAGTTaGCATCAGCGCCATATTCAA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPGHCS*HQRHIQ
Trigger: TTGAATATGGCGCTGATGTCAACTGCAGTGCCCAGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACATTTTCAACTTCTTaGGCACGTCTGAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYTFSTS*ARLRAE
Trigger: TTCTGCTCTCAGACGTGCTCAAGAAGTTGAAAATGT...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACACTTGTTCCACACATaGGGACCCTCTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKHLFHT*GPSRCS
Trigger: TGAACAGCGAGAGGGTCCGCATGTGTGGAACAAGTG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGTCCATGCTCAGTGCTaGCAGGCCATCGATCCGATG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLVHAQC*QAIDPM
Trigger: CATCGGATCGATGGCCTGGCAGCACTGAGCATGGAC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTCGGAGTAGGTCTCTaGAGCGGGCTGAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLGVGL*SGLSWK
Trigger: CTTCCAACTCAGCCCGCTGCAGAGACCTACTCCGAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGAGGAACTCCGCTGTTaGGGTATTGCCCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKEELRC*GIAQSK
Trigger: TTTGGACTGGGCAATACCGCAACAGCGGAGTTCCTC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGTCTTGGTGCCATCTaGATTGGCGTTGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGLGAI*IGVGVG
Trigger: CCCAACGCCAACGCCAATGCAGATGGCACCAAGACC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCTAGGGTAGGGAATTaGTGGGGACCTGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPRVGN*WGPECF
Trigger: GAAGCATTCAGGTCCCCAGCAATTCCCTACCCTAGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCTCGTCTTCCCCTGTaGACAGCACATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPRLPL*TAHLSS
Trigger: AGAAGACAGATGTGCTGTGCACAGGGGAAGACGAGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATTGTCTGTGTATTTTTaGAGCGGGGAGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLSVYF*SGEAAW
Trigger: CCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGTTCACACACAGAGCTaGCATAGAACTCCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKVHTQS*HRTPKR
Trigger: GCGCTTGGGAGTTCTATGGCAGCTCTGTGTGTGAAC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACGTAAAACTCCGCCTCTaGAATGGTGACAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHVKLRL*NGDNFQ
Trigger: CTGGAAATTGTCACCATTGCAGAGGCGGAGTTTTAC...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCCTCAGCTCCAGCCTaGCTTTTGAAGCGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPSAPA*LLKRRH
Trigger: ATGGCGACGCTTCAAAAGCCAGGCTGGAGCTGAGGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCCCATCTAGAGCCTTaGGGTACTTGCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPHLEP*GTCHWT
Trigger: TGTCCAATGGCAAGTACCCCAAGGCTCTAGATGGGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAGAAGACAGGTCAAGTaGTTTGTCTGTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCRRQVK*FVCDIF
Trigger: AAAGATGTCACAGACAAACCACTTGACCTGTCTTCT...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATCATGTGGTCACCTTTaGAAGCGTCCGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKSCGHL*KRPHPP
Trigger: TGGTGGATGCGGACGCTTCCAAAGGTGACCACATGA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTGGGCGTCCTGAGCTaGACACGGACCCTGAAACAT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLGVLS*TRTLKH
Trigger: ATGTTTCAGGGTCCGTGTCCAGCTCAGGACGCCCAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGTCAGTGGGGACTTCTaGATGCAGTTTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKVSGDF*MQFGAA
Trigger: AGCAGCACCAAACTGCATCCAGAAGTCCCCACTGAC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTACAAGGCCTGCTTTaGGTGCCCCTGCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLQGLL*VPLHQF
Trigger: AAACTGATGCAGGGGCACCCAAAGCAGGCCTTGTAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGGAGTCTTTGGTTGCTaGGTGGCTACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKGVFGC*VATFSL
Trigger: GAGAGAGAAGGTAGCCACCCAGCAACCAAAGACTCC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTCTCACTGTCATTCTaGTCGGCAATGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLSLSF*SAMASS
Trigger: GGAAGAGGCCATTGCCGACCAGAATGACAGTGAGAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAATGAAAGGCTCTTCATaGGCGGAGAGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKMKGSS*AESLRA
Trigger: TGCTCTCAGGCTCTCCGCCCATGAAGAGCCTTTCAT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACTTTTGCCACTTGCATTaGTGGATGAAAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYFCHLH*WMKGSS
Trigger: TGAAGAGCCTTTCATCCACCAATGCAAGTGGCAAAA...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGCTTTGGCTCCTGCTTaGCTGGTGGTGACAAATCGT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKALAPA*LVVTNR
Trigger: ACGATTTGTCACCACCAGCCAAGCAGGAGCCAAAGC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGAGCCCAGCAGTGTCTaGAGCTCATTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKEPSSV*SSLVNS
Trigger: GGAATTCACCAATGAGCTCCAGACACTGCTGGGCTC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTCGTTGCTTTTTAGGATaGAGCCCTGTTAATTCAATG +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCRCFLG*SPVNSM
Trigger: CATTGAATTAACAGGGCTCCATCCTAAAAAGCAACG...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115512.9
ENSMUST00000115513.9
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCAGTTTGTCGCTTTTaGCCCCAGTCTTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPVCRF*PQSSLD
Trigger: ATCAAGGGAAGACTGGGGTCAAAAGCGACAAACTGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTCTTCCAGGGTGACTaGCTTTGGCTTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLFQGD*LWLLFL
Trigger: CAGGAAAAGAAGCCAAAGTCAGTCACCCTGGAAGAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGTGGGTGCTGTCACCTaGCAGTTTGCGTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLVGAVT*QFAFPV
Trigger: GACAGGAAACGCAAACTGTCAGGTGACAGCACCCAC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGCGTGCAGCTTGGCTaGGTCTGCTTTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGVQLG*VCFLPL
Trigger: AAGTGGCAAAAAGCAGACTCAGCCAAGCTGCACGCC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGACTGGGTGGTCTCTTaGGGAGAATTTGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLDWVVS*GEFERG
Trigger: GCCACGCTCAAATTCTCCTCAAGAGACCACCCAGTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCATTGTCTCGATGATTaGCATCACAGACCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHHCLDD*HHRPCS
Trigger: AGAACAAGGTCTGTGATGTCAATCATCGAGACAATG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CATACCACTGGATCACGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTGTATTCGGTTTGAATTaGATCTCTGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HTTGSRPIAFTWCEQVLCVFGLN*ISGFLS
Trigger: GGAAAGAAATCCAGAGATGCAATTCAAACCGAATAC...ACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACGTGATCCAGTGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATATCCACCGAGCTCCTaGTGGTCTTGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLYPPSS*WSWCHL
Trigger: CAGATGGCACCAAGACCAGCAGGAGCTCGGTGGATA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAAGGCCTGCTTTGGGTaGCCCTGCATCAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKKACFG*PCISFS
Trigger: ACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTCCAAGAATGGAGTTaGTACCTGCACACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLQEWS*YLHTQV
Trigger: AACCTGGGTGTGCAGGTAGCAACTCCATTCTTGGAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGAGCTGACTGGAATCTaGATACAGTTCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKELTGI*IQFGGD
Trigger: GTCACCACCGAACTGTATGCAGATTCCAGTCAGCTC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATGTCACCTGACAGTTTaGGTTTCCTGTCTAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKCHLTV*VSCLAG
Trigger: TCCGGCTAGACAGGAAACGCAAACTGTCAGGTGACA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAACTTCCTTCCTGCTTTaGCGGCCAGGTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLTSFLL*RPGLLS
Trigger: CGAGAGCAAACCTGGCCGGCAAAGCAGGAAGGAAGT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGACAGGAGAATACAGTaGCTGGGCCAAGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLDRRIQ*LGQAVG
Trigger: TCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGACATAGTGTGGGGGTaGCAGGTAGAGGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLDIVWG*QVEEAF
Trigger: GAACGCTTCCTCTACCTGCCACCCCCACACTATGTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACAGAGGCTGAAGGTGTaGAGAGCCTCATGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLQRLKV*RASWVK
Trigger: CTTCACCCATGAGGCTCTCCACACCTTCAGCCTCTG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACATTCCAGCTAGAGTTTaGCTTCAGGTTCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHIPARV*LQVLVS
Trigger: ACTGACAAGAACCTGAAGCCAAACTCTAGCTGGAAT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAACCGCCCACACAAAATaGTTTGGGATCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKTAHTK*FGILLG
Trigger: ACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCTTTCCCAGTCGGCTaGGCTGAATTTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPFPVG*AEFAHL
Trigger: GAGGTGTGCAAATTCAGCCCAGCCGACTGGGAAAGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAAGATCTTTGTCCTCTaGGGCTTCAAAGAGATCATG +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHKIFVL*GFKEIM
Trigger: CATGATCTCTTTGAAGCCCCAGAGGACAAAGATCTT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACTTTTGCCACTTGCATTaGTGGATGAAAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHFCHLH*WMKGSS
Trigger: TGAAGAGCCTTTCATCCACCAATGCAAGTGGCAAAA...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATGGGTCTTCTGGTCCTaGGGGATTAGCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKWVFWS*GISQNI
Trigger: GATGTTTTGGCTAATCCCCCAGGACCAGAAGACCCA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTGTTCATCCAGCTGTaGACGTTCCCATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLFIQL*TFPYRG
Trigger: CCCTCTGTATGGGAACGTTCACAGCTGGATGAACAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACCTTGTACATATTCAGTaGATACTTATTTGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYLVHIQ*ILIWRV
Trigger: GACTCGCCAAATAAGTATTCACTGAATATGTACAAG...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACAGCCTTGTTTTTCAGTaGCAGACTTTTGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHSLVFQ*QTFAIV
Trigger: AACAATGGCAAAAGTCTGTCACTGAAAAACAAGGCT...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAACTTGCATTGGTGGATaGAAGGCTCTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLTCIGG*KALHGR
Trigger: CCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTCCTCCTGGACTCCTaGGGTATCAAGTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLLLDS*GIKCLV
Trigger: AACCAAGCACTTGATACCTCAGGAGTCCAGGAGGAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTGCTTGGCTGGTGGTaGCAAATCGTAGTCCGAACT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLLGWW*QIVVRT
Trigger: AGTTCGGACTACGATTTGTCACCACCAGCCAAGCAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCTGGGCACTGCAGTTaGCATCAGCGCCATATTCAA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPGHCS*HQRHIQ
Trigger: TTGAATATGGCGCTGATGTCAACTGCAGTGCCCAGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACACTTGTTCCACACATaGGGACCCTCTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLHLFHT*GPSRCS
Trigger: TGAACAGCGAGAGGGTCCGCATGTGTGGAACAAGTG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CCTTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACGTATTCGGTTTGAATTaGATCTCTGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PSPNSLQQTKHIVLTTQYVFGLN*ISGFLS
Trigger: GGAAAGAAATCCAGAGATGCAATTCAAACCGAATAC...GTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGTGGGGACTTCTGGATaGAGTTTGGTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLVGTSG*SLVLLA
Trigger: AGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCAC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAATGGAGTTGCTACCTaGACACCCAGGTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKNGVAT*TPRFSL
Trigger: CAAAGAGAACCTGGGTGTGCAGGTAGCAACTCCATT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATGGGTTTCAGAACTTTaGCATCGTTGGATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKWVSEL*HRWIRP
Trigger: AGGCCGAATCCAACGATGGCAAAGTTCTGAAACCCA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGCTGAGTCTGCTTTTTaGCACTTGCATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKAESAF*HLHWWM
Trigger: CATCCACCAATGCAAGTGGCAAAAAGCAGACTCAGC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp TTCACCCAATTCACTCCAGCAAACCAAACACATAGTCCTCACCACACAATACACCTTTCTTTAATTTTCTaGTGTTTGGCAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FTQFTPANQTHSPHHTIHLSLIF*CLAGSL
Trigger: AAGGCTGCCTGCCAAACAGCAGAAAATTAAAGAAAG...GTGTATTGTGTGGTGAGGACTATGTGTTTGGTTTGCTGGAGTGAATTGGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATTGTCTGTGTATTTTTaGAGCGGGGAGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLSVYF*SGEAAW
Trigger: CCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGAAAGGGTATATGGCTaGAGTGGCCCCCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLERVYG*SGPLHV
Trigger: TACATGGAGGGGGCCACTCCAGCCATATACCCTTTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGGAAGCGTTCCCCACTaGTGCAGACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLGSVPH*CRQENT
Trigger: TGTATTCTCCTGTCTGCACCAGTGGGGAACGCTTCC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCCCATCTAGAGCCTTaGGGTACTTGCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPHLEP*GTCHWT
Trigger: TGTCCAATGGCAAGTACCCCAAGGCTCTAGATGGGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAGGGTAGGGAATTGCTaGGGACCTGAATGCTTCATT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKRVGNC*GPECFI
Trigger: AATGAAGCATTCAGGTCCCCAGCAATTCCCTACCCT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTCAATGGGCGTGTGTaGGATCAACATGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLNGRV*DQHGMD
Trigger: GTCCATCCCATGTTGATCCCACACACGCCCATTGAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGTCAGTGGGGACTTCTaGATGCAGTTTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLVSGDF*MQFGAA
Trigger: AGCAGCACCAAACTGCATCCAGAAGTCCCCACTGAC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAAGCTGAACACTGGCTaGCTTGAGGCCTGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKKLNTG*LEACLK
Trigger: TTTCAAACAGGCCTCAAGCCAGCCAGTGTTCAGCTT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGAACTTTGCCATCGTTaGATTCGGCCTCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKELCHR*IRPHQF
Trigger: GAACTGATGAGGCCGAATCCAACGATGGCAAAGTTC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACCAGCTTGGATGGCTTaGGTTTCAGAACTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKPAWMA*VSELCH
Trigger: ATGGCAAAGTTCTGAAACCCAAGCCATCCAAGCTGG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATGGCTCACTCACAGGTaGCCTCTCCAAGAAATACTT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKWLTHR*PLQEIL
Trigger: AAGTATTTCTTGGAGAGGCCACCTGTGAGTGAGCCA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAATGAAAGGCTCTTCATaGGCGGAGAGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLMKGSS*AESLRA
Trigger: TGCTCTCAGGCTCTCCGCCCATGAAGAGCCTTTCAT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATGGGGCGAGACTGGGTaGTCTCTTGAGGAGAATTTG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLWGETG*SLEENL
Trigger: CAAATTCTCCTCAAGAGACCACCCAGTCTCGCCCCA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAAGGCTTCCAGGTCTTTaGGGCAGGAGAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLRLPGL*GRRTRD
Trigger: GTCTCTTGTTCTCCTGCCCCAAAGACCTGGAAGCCT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGAGCCCAGCAGTGTCTaGAGCTCATTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLEPSSV*SSLVNS
Trigger: GGAATTCACCAATGAGCTCCAGACACTGCTGGGCTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGAATTGCTGGGGACCTaGATGCTTCATTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKELLGT*MLHLEI
Trigger: TATCTCCAAATGAAGCATTCAGGTCCCCAGCAATTC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATGGCCTCTTCCAGGGTaGCTGACTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLWPLPG*LTLASF
Trigger: AAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCGCCTCTGCAATGGTaGCAATTTCCAGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPPLQW*QFPDWE
Trigger: TTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATGCTTTGGGTGCCCCTaGATCAGTTTTAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLCFGCP*ISFSVC
Trigger: GCAGACACTAAAACTGATGCAGGGGCACCCAAAGCA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAAAGGCCTGCTTTGGGTaGCCCTGCATCAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLKACFG*PCISFS
Trigger: ACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATGTCACCTGACAGTTTaGGTTTCCTGTCTAGCCGGA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLCHLTV*VSCLAG
Trigger: TCCGGCTAGACAGGAAACGCAAACTGTCAGGTGACA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATGCAGCAAGTGGCGTTaGTTTTTAGGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLCSKWR*FLGWSP
Trigger: AGGGCTCCATCCTAAAAAGCAACGCCACTTGCTGCA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAACCGCCCACACAAAATaGTTTGGGATCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLTAHTK*FGILLG
Trigger: ACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTTTGCCAGCTTGGATaGCTTGGGTTTCAGAACTTT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLCQLG*LGFQNF
Trigger: AAAGTTCTGAAACCCAAGCCATCCAAGCTGGCAAAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACAGTCTCTTCCCGGATaGCTTCTCGATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLQSLPG*LLDVVC
Trigger: ACAGACAACATCGAGAAGCCATCCGGGAAGAGACTG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATCTGCAAGCTCCTCCTaGACTCCTGAGGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLSASSS*TPEVSS
Trigger: ACTTGATACCTCAGGAGTCCAGGAGGAGCTTGCAGA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCATATTCAAGGAGGTaGCGCACGATGTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPYSRR*RTMLSH
Trigger: ATGGCTCAACATCGTGCGCCACCTCCTTGAATATGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTATTTCATCTCCAACTCTaGGAAGCGCATCATTGCACG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLFHLQL*EAHHCT
Trigger: CGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAA...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGCCCAGGAAACAGACTaGCATTGGGTAACAAAACTG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLAQETD*HWVTKL
Trigger: CAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGCTGAGTCTGCTTTTTaGCACTTGCATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLAESAF*HLHWWM
Trigger: CATCCACCAATGCAAGTGGCAAAAAGCAGACTCAGC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAATTCCAGCTAGAGTTTaGCTTCAGGTTCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKIPARV*LQVLVS
Trigger: ACTGACAAGAACCTGAAGCCAAACTCTAGCTGGAAT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAAAGTGAAAGATTCATaGAAGTCAGTGATTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKKVKDS*KSVIRP
Trigger: GGGCCGAATCACTGACTTCCATGAATCTTTCACTTT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGAACTTTGCCATCGTTaGATTCGGCCTCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLELCHR*IRPHQF
Trigger: GAACTGATGAGGCCGAATCCAACGATGGCAAAGTTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCAGCTTGGATGGCTTaGGTTTCAGAACTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPAWMA*VSELCH
Trigger: ATGGCAAAGTTCTGAAACCCAAGCCATCCAAGCTGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAAGATCTTTGTCCTCTaGGGCTTCAAAGAGATCATG +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKKIFVL*GFKEIM
Trigger: CATGATCTCTTTGAAGCCCCAGAGGACAAAGATCTT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAATTTTGCCACTTGCATTaGTGGATGAAAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKFCHLH*WMKGSS
Trigger: TGAAGAGCCTTTCATCCACCAATGCAAGTGGCAAAA...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACGGGAGTATTCGGTTTaGATTGCATCTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLREYSV*IASLDF
Trigger: GAAATCCAGAGATGCAATTCAAACCGAATACTCCCG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAAGCCTTGTTTTTCAGTaGCAGACTTTTGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKSLVFQ*QTFAIV
Trigger: AACAATGGCAAAAGTCTGTCACTGAAAAACAAGGCT...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGAATTGCTGGGGACCTaGATGCTTCATTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLELLGT*MLHLEI
Trigger: TATCTCCAAATGAAGCATTCAGGTCCCCAGCAATTC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAGTAAAACTCCGCCTCTaGAATGGTGACAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLVKLRL*NGDNFQ
Trigger: CTGGAAATTGTCACCATTGCAGAGGCGGAGTTTTAC...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACTTTGCCAGCTTGGATaGCTTGGGTTTCAGAACTTT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLLCQLG*LGFQNF
Trigger: AAAGTTCTGAAACCCAAGCCATCCAAGCTGGCAAAG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAACTTGTACATATTCAGTaGATACTTATTTGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKLVHIQ*ILIWRV
Trigger: GACTCGCCAAATAAGTATTCACTGAATATGTACAAG...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR TCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAACATTTTCAACTTCTTaGGCACGTCTGAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLTFSTS*ARLRAE
Trigger: TTCTGCTCTCAGACGTGCTCAAGAAGTTGAAAATGT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp CGTCCAATAGCATTTACCTGGTGTGAGCAGGTACTCTGTAAACAAAACATAAAAGTATTCGGTTTGAATTaGATCTCTGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RPIAFTWCEQVLCKQNIKVFGLN*ISGFLS
Trigger: GGAAAGAAATCCAGAGATGCAATTCAAACCGAATAC...TTTTATGTTTTGTTTACAGAGTACCTGCTCACACCAGGTAAATGCTATTGGACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR GCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAATCAGTTTTAGTGTCTaGTTCTTCTCGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLISFSV*FFSEKV
Trigger: GACCTTCTCCGAGAAGAAGCAGACACTAAAACTGAT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTAATTCCAGCTAGAGTTTaGCTTCAGGTTCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLIPARV*LQVLVS
Trigger: ACTGACAAGAACCTGAAGCCAAACTCTAGCTGGAAT...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043441.13
ENSMUST00000065143.14
ENSMUST00000115512.9
ENSMUST00000115513.9
ENSMUST00000124033.8
CDS-3UTR CCA 90 bp GAGCTTTGTATGAAATTACGCCAAGCACAGAGCTCCTTTTCATTTATTCATTTACCACACAAAATGGTTTaGGATCCTCTTGGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: ELCMKLRQAQSSFSFIHLPHKMV*DPLGFY
Trigger: GTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGG...TAAATGAATAAATGAAAAGGAGCTCTGTGCTTGGCGTAATTTCATACAAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transc