Pregenerated sensors for BCO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032066Ensembl transcript IDs: ENSMUST00000119103.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTGAGTCTCCTCCGCCGTaGTCAGCAGTGGGGCAATGC | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPESPPP*SAVGQC Trigger: GCATTGCCCCACTGCTGACCACGGCGGAGGAGACTC...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTCAGTGGGGCAATGCATaGCAGGCTCTGCTTCGGTCC | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPQWGNA*QALLRS Trigger: GGACCGAAGCAGAGCCTGCCATGCATTGCCCCACTG...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTGTCGTAATGAGGATGTaGAGTGGCTCCATTCACAGC | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPVVMRM*SGSIHS Trigger: GCTGTGAATGGAGCCACTGCACATCCTCATTACGAC...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR TCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTCAGCGTGCCAAATTCTaGGATCACAATTCTACCTCC | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPQRAKF*DHNSTS Trigger: GGAGGTAGAATTGTGATCTCAGAATTTGGCACGCTG...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTTCAGCAGTGGGGCAATaGATGGCAGGCTCTGCTTCG | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFSAVGQ*MAGSAS Trigger: CGAAGCAGAGCCTGCCATGCATTGCCCCACTGCTGA...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTTCTTGTATGTCACTGTaGCCCTCTCCATTCGGAACT | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPSCMSL*PSPFGT Trigger: AGTTCCGAATGGAGAGGGGCACAGTGACATACAAGA...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGTTCAAAGATGCTCTTaGATGGGTCAGGAAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILVQRCS*MGQEGP Trigger: TGGCCCTTCCTGACCCATGCAAGAGCATCTTTGAAC...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTATCTCAGTGGAGGCAATaGAACATAGCACCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILSQWRQ*NIAPVL Trigger: GAGCACAGGTGCTATGTTCCATTGCCTCCACTGAGA...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTCTTCTCCCATCATCCTaGCAGCACAGATCAATCACA | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPLLPSS*QHRSIT Trigger: TGTGATTGATCTGTGCTGCCAGGATGATGGGAGAAG...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAAGACAAGGAGGAAGTTaGTTTCACTCTGGTTGGGAG | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILRQGGS*FHSGWE Trigger: CTCCCAACCAGAGTGAAAGCAACTTCCTCCTTGTCT...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | TTGAGTGAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGTACCTCCAGCACTGTTaGCCTTATATGTGTCACTCT | + |
Preference number: 4 (lower is better) Translates to: LSEIHHFLFSSECAHRSPYLQHC*PYMCHS Trigger: AGAGTGACACATATAAGGCCAACAGTGCTGGAGGTA...CGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTCACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTAACCGCGTGTTATACTaGGGCTCCCAGCTTATCCCA | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFNRVLY*GSQLIP Trigger: TGGGATAAGCTGGGAGCCCCAGTATAACACGCGGTT...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTATCTTCCAGGTCTTCGTaGTGTAGATTTTCAGGAGAG | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILSSRSS*CRFSGE Trigger: CTCTCCTGAAAATCTACACCACGAAGACCTGGAAGA...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTTTCCTCATCTGCTCCTaGCACCGGAACAAAAACGGG | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFFLICS*HRNKNG Trigger: CCCGTTTTTGTTCCGGTGCCAGGAGCAGATGAGGAA...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAAAGTTGCTTTCACTCTaGTTGGGAGTGATCACCACA | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILKLLSL*LGVITT Trigger: TGTGGTGATCACTCCCAACCAGAGTGAAAGCAACTT...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | TTGAGTGAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGCACTCTGTAGAAACTTaGTCTTGTATGTCACTGTGC | + |
Preference number: 4 (lower is better) Translates to: LSEIHHFLFSSECAHRSPHSVET*SCMSLC Trigger: GCACAGTGACATACAAGAGCAAGTTTCTACAGAGTG...CGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTCACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTCAGGAAGGGCCAGCGTaGCAAATTCTGAGATCACAA | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFQEGPA*QILRSQ Trigger: TTGTGATCTCAGAATTTGGCACGCTGGCCCTTCCTG...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR GCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTACTGTCTTCCTCATCTaGTCCTGGCACCGGAACAAA | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFTVFLI*SWHRNK Trigger: TTTGTTCCGGTGCCAGGAGCAGATGAGGAAGACAGT...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTGTATGCTGTCCCATCTaGGTCGTAATGAGGATGTGC | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFVCCPI*VVMRMC Trigger: GCACATCCTCATTACGACCCAGATGGGACAGCATAC...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCTTCATTTTCTCAGTaGAGGCAATGGAACATAGCA | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILASFSQ*RQWNIA Trigger: TGCTATGTTCCATTGCCTCCACTGAGAAAATGAAGC...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAATCACAATACAGCCCTaGTCCTCAAAGGCATTGATT | + |
Preference number: 4 (lower is better) Translates to: EIHHFLFSSECAHRSPILITIQP*SSKALI Trigger: AATCAATGCCTTTGAGGACCAGGGCTGTATTGTGAT...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTCCTGTTTCACAGCGCTaGCTGAAGAATAGGACAGTG | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFPVSQR*LKNRTV Trigger: CACTGTCCTATTCTTCAGCCAGCGCTGTGAAACAGG...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR TCA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTATTCCATCAAACCAATaGTTGTATCTATCCTTCCCA | + |
Preference number: 4 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPIPSNQ*LYLSFP Trigger: TGGGAAGGATAGATACAATCATTGGTTTGATGGAAT...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR TCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTCTCCATTCACAGCAATaGATTTGCTCCAGTCCACCT | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFLHSQQ*ICSSPP Trigger: AGGTGGACTGGAGCAAATTCATTGCTGTGAATGGAG...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR TCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTTGTTTATCCACCACATaGAACCGCGTGTTATACTGG | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFCLSTT*NRVLYW Trigger: CCAGTATAACACGCGGTTTCATGTGGTGGATAAACA...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR TCA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTAGGTGGCTCAAACCTTaGCATGAAACGTTCAAAGAT | + |
Preference number: 4 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFRWLKP*HETFKD Trigger: ATCTTTGAACGTTTCATGTCAAGGTTTGAGCCACCT...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 90 bp | GTCCTCGGACCCGAGCAGAGACAGCACTCAGAGTCTCCTCCGCCGTaGTCAGCAGTGGGGCAATGCATGGCAGGCTCTGCTTCGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: VLGPEQRQHSESPPP*SAVGQCMAGSASVP Trigger: TGGGACCGAAGCAGAGCCTGCCATGCATTGCCCCACTGCTGACCACGGCGGAGGAGACTCTGAGTGCTGTCTCTGCTCGGGTCCGAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 90 bp | ACCCGTAAGGCATCTGCACGGGTACTTCCGCTCGCCCCAGCTCTGTaGAGCTCTTGGCATCCAAGACAAGGAGGAAGTTGCTTTCACTCT | + |
Preference number: 5 (lower is better) Translates to: TRKASARVLPLAPAL*SSWHPRQGGSCFHS Trigger: AGAGTGAAAGCAACTTCCTCCTTGTCTTGGATGCCAAGAGCTTCACAGAGCTGGGGCGAGCGGAAGTACCCGTGCAGATGCCTTACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 90 bp | ACCTCTTGGCCCATAGCTGTTCCCCATGTTGTATGCTGTCCCATCTaGGTCGTAATGAGGATGTGCAGTGGCTCCATTCACAGCAATGAA | + |
Preference number: 5 (lower is better) Translates to: TSWPIAVPHVVCCPI*VVMRMCSGSIHSNE Trigger: TTCATTGCTGTGAATGGAGCCACTGCACATCCTCATTACGACCCAGATGGGACAGCATACAACATGGGGAACAGCTATGGGCCAAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTACGTTCAAAGATGCTCTaGCATGGGTCAGGAAGGGCC | + |
Preference number: 5 (lower is better) Translates to: EIHHFLFSSECAHRSPILRSKML*HGSGRA Trigger: GGCCCTTCCTGACCCATGCAAGAGCATCTTTGAACG...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 90 bp | GTTCCCCATGTTGTATGCTGTCCCATCTGGGTCGTAATGAGGATGTaGAGTGGCTCCATTCACAGCAATGAATTTGCTCCAGTCCACCTT | + |
Preference number: 5 (lower is better) Translates to: VPHVVCCPIWVVMRM*SGSIHSNEFAPVHL Trigger: AAGGTGGACTGGAGCAAATTCATTGCTGTGAATGGAGCCACTGCACATCCTCATTACGACCCAGATGGGACAGCATACAACATGGGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTCTACCTCCAGCACTGTaGGCCTTATATGTGTCACTC | + |
Preference number: 5 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPLPPAL*ALYVSL Trigger: GAGTGACACATATAAGGCCAACAGTGCTGGAGGTAG...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAAGCTCTGTGAAGCTCTaGGCATCCAAGACAAGGAGG | + |
Preference number: 5 (lower is better) Translates to: EIHHFLFSSECAHRSPILSSVKL*ASKTRR Trigger: CCTCCTTGTCTTGGATGCCAAGAGCTTCACAGAGCT...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 90 bp | AAAGATGCTCTTGCATGGGTCAGGAAGGGCCAGCGTGCCAAATTCTaGGATCACAATTCTACCTCCAGCACTGTTGGCCTTATATGTGTC | + |
Preference number: 5 (lower is better) Translates to: KDALAWVRKGQRAKF*DHNSTSSTVGLICV Trigger: GACACATATAAGGCCAACAGTGCTGGAGGTAGAATTGTGATCTCAGAATTTGGCACGCTGGCCCTTCCTGACCCATGCAAGAGCATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 90 bp | ATTATAGCAAGAACCTCTTGGCCCATAGCTGTTCCCCATGTTGTATaGTGTCCCATCTGGGTCGTAATGAGGATGTGCAGTGGCTCCATT | + |
Preference number: 5 (lower is better) Translates to: IIARTSWPIAVPHVV*CPIWVVMRMCSGSI Trigger: AATGGAGCCACTGCACATCCTCATTACGACCCAGATGGGACAGCATACAACATGGGGAACAGCTATGGGCCAAGAGGTTCTTGCTATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTTGTAGAAACTTGCTCTaGTATGTCACTGTGCCCCTC | + |
Preference number: 5 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPCRNLL*YVTVPL Trigger: GAGGGGCACAGTGACATACAAGAGCAAGTTTCTACA...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 90 bp | CATCTGGGTCGTAATGAGGATGTGCAGTGGCTCCATTCACAGCAATaGATTTGCTCCAGTCCACCTTTTCTGTCCTTTCCAGCATCTCAA | + |
Preference number: 5 (lower is better) Translates to: HLGRNEDVQWLHSQQ*ICSSPPFLSFPASQ Trigger: TTGAGATGCTGGAAAGGACAGAAAAGGTGGACTGGAGCAAATTCATTGCTGTGAATGGAGCCACTGCACATCCTCATTACGACCCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 90 bp | TACCTCCAGCACTGTTGGCCTTATATGTGTCACTCTGTAGAAACTTaGTCTTGTATGTCACTGTGCCCCTCTCCATTCGGAACTGGTGAA | + |
Preference number: 5 (lower is better) Translates to: YLQHCWPYMCHSVET*SCMSLCPSPFGTGE Trigger: TTCACCAGTTCCGAATGGAGAGGGGCACAGTGACATACAAGAGCAAGTTTCTACAGAGTGACACATATAAGGCCAACAGTGCTGGAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | CCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAGCCTTCCTTTGTACTGCACAAAGTaGACGTTGGTGTTGTCAGTC | + |
Preference number: 5 (lower is better) Translates to: PFSLFLRVCSSKPDPSLPLYCTK*TLVLSV Trigger: GACTGACAACACCAACGTCAACTTTGTGCAGTACAA...AGGAAGGCTAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTAAAGACAAGGAGGAAGTaGCTTTCACTCTGGTTGGGA | + |
Preference number: 5 (lower is better) Translates to: EIHHFLFSSECAHRSPILKTRRK*LSLWLG Trigger: TCCCAACCAGAGTGAAAGCAACTTCCTCCTTGTCTT...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 90 bp | AAAGTTGACGTTGGTGTTGTCAGTCATAGTAGGTGGCTCAAACCTTaGCATGAAACGTTCAAAGATGCTCTTGCATGGGTCAGGAAGGGC | + |
Preference number: 5 (lower is better) Translates to: KVDVGVVSHSRWLKP*HETFKDALAWVRKG Trigger: GCCCTTCCTGACCCATGCAAGAGCATCTTTGAACGTTTCATGTCAAGGTTTGAGCCACCTACTATGACTGACAACACCAACGTCAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 90 bp | TTGTCATTCCAAAGCTATGGTAGTAAGAAGGCTTCATTTTCTCAGTaGAGGCAATGGAACATAGCACCTGTGCTCCGTGAATCGTCTCCC | + |
Preference number: 5 (lower is better) Translates to: LSFQSYGSKKASFSQ*RQWNIAPVLRESSP Trigger: GGGAGACGATTCACGGAGCACAGGTGCTATGTTCCATTGCCTCCACTGAGAAAATGAAGCCTTCTTACTACCATAGCTTTGGAATGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTATCACTCTGTAGAAACTaGCTCTTGTATGTCACTGTG | + |
Preference number: 5 (lower is better) Translates to: EIHHFLFSSECAHRSPILSLCRN*LLYVTV Trigger: CACAGTGACATACAAGAGCAAGTTTCTACAGAGTGA...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTATTCACAGCAATGAATTaGCTCCAGTCCACCTTTTCT | + |
Preference number: 5 (lower is better) Translates to: EIHHFLFSSECAHRSPILFTAMN*LQSTFS Trigger: AGAAAAGGTGGACTGGAGCAAATTCATTGCTGTGAA...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | AGGGTCAGGTCCAAACTACAACAGCTTTTGAGTGAGATCCACCATTTTCTCTTTTTGCTTTCACTCTGGTaGGGAGTGATCACCACAGAG | + |
Preference number: 5 (lower is better) Translates to: RVRSKLQQLLSEIHHFLFLLSLW*GVITTE Trigger: CTCTGTGGTGATCACTCCCAACCAGAGTGAAAGCAA...AAAGAGAAAATGGTGGATCTCACTCAAAAGCTGTTGTAGTTTGGACCTGACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS-3UTR CAA 90 bp | GAGATCCACCATTTTCTCTTTTCCTCAGAGTGTGCTCATCGAAGCCCGATCCTACTCAAAGGCATTGATTaGATGATAGGTAAGAAAAGG | + |
Preference number: 5 (lower is better) Translates to: EIHHFLFSSECAHRSPILLKGID*MIGKKR Trigger: CCTTTTCTTACCTATCATCAAATCAATGCCTTTGAG...TAGGATCGGGCTTCGATGAGCACACTCTGAGGAAAAGAGAAAATGGTGGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 72 bp | CCCGAGCAGAGACAGCACTCAGAGTCTCCTCCGCCGTaGTCAGCAGTGGGGCAATGCATGGCAGGCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: PEQRQHSESPPP*SAVGQCMAGSA Trigger: AGCAGAGCCTGCCATGCATTGCCCCACTGCTGACCACGGCGGAGGAGACTCTGAGTGCTGTCTCTGCTCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 72 bp | GACAGCACTCAGAGTCTCCTCCGCCGTGGTCAGCAGTaGGGCAATGCATGGCAGGCTCTGCTTCGGTCCCAA | + |
Preference number: 6 (lower is better) Translates to: DSTQSLLRRGQQ*GNAWQALLRSQ Trigger: TTGGGACCGAAGCAGAGCCTGCCATGCATTGCCCCACTGCTGACCACGGCGGAGGAGACTCTGAGTGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 72 bp | GCATCTGCACGGGTACTTCCGCTCGCCCCAGCTCTGTaGAGCTCTTGGCATCCAAGACAAGGAGGAAGTTGC | + |
Preference number: 6 (lower is better) Translates to: ASARVLPLAPAL*SSWHPRQGGSC Trigger: GCAACTTCCTCCTTGTCTTGGATGCCAAGAGCTTCACAGAGCTGGGGCGAGCGGAAGTACCCGTGCAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 90 bp | GGCATCTGCACGGGTACTTCCGCTCGCCCCAGCTCTGTGAAGCTCTaGGCATCCAAGACAAGGAGGAAGTTGCTTTCACTCTGGTTGGGA | + |
Preference number: 6 (lower is better) Translates to: GICTGTSARPSSVKL*ASKTRRKLLSLWLG Trigger: TCCCAACCAGAGTGAAAGCAACTTCCTCCTTGTCTTGGATGCCAAGAGCTTCACAGAGCTGGGGCGAGCGGAAGTACCCGTGCAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 72 bp | CACCACAGAGAGTATAACCCCACTGTCTTCCTCATCTaGTCCTGGCACCGGAACAAAAACGGGCTCCGAGGG | + |
Preference number: 6 (lower is better) Translates to: HHREYNPTVFLI*SWHRNKNGLRG Trigger: CCCTCGGAGCCCGTTTTTGTTCCGGTGCCAGGAGCAGATGAGGAAGACAGTGGGGTTATACTCTCTGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 72 bp | ACGGGTACTTCCGCTCGCCCCAGCTCTGTGAAGCTCTaGGCATCCAAGACAAGGAGGAAGTTGCTTTCACTC | + |
Preference number: 6 (lower is better) Translates to: TGTSARPSSVKL*ASKTRRKLLSL Trigger: GAGTGAAAGCAACTTCCTCCTTGTCTTGGATGCCAAGAGCTTCACAGAGCTGGGGCGAGCGGAAGTACCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 72 bp | CTTGCATGGGTCAGGAAGGGCCAGCGTGCCAAATTCTaGGATCACAATTCTACCTCCAGCACTGTTGGCCTT | + |
Preference number: 6 (lower is better) Translates to: LAWVRKGQRAKF*DHNSTSSTVGL Trigger: AAGGCCAACAGTGCTGGAGGTAGAATTGTGATCTCAGAATTTGGCACGCTGGCCCTTCCTGACCCATGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 72 bp | CCTGGGAGAAGCTGTCCAGTGTGTTTATCCACCACATaGAACCGCGTGTTATACTGGGGCTCCCAGCTTATC | + |
Preference number: 6 (lower is better) Translates to: PGRSCPVCLSTT*NRVLYWGSQLI Trigger: GATAAGCTGGGAGCCCCAGTATAACACGCGGTTTCATGTGGTGGATAAACACACTGGACAGCTTCTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 72 bp | CCCATAGCTGTTCCCCATGTTGTATGCTGTCCCATCTaGGTCGTAATGAGGATGTGCAGTGGCTCCATTCAC | + |
Preference number: 6 (lower is better) Translates to: PIAVPHVVCCPI*VVMRMCSGSIH Trigger: GTGAATGGAGCCACTGCACATCCTCATTACGACCCAGATGGGACAGCATACAACATGGGGAACAGCTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 72 bp | CAAAGATGCTCTTGCATGGGTCAGGAAGGGCCAGCGTaGCAAATTCTGAGATCACAATTCTACCTCCAGCAC | + |
Preference number: 6 (lower is better) Translates to: QRCSCMGQEGPA*QILRSQFYLQH Trigger: GTGCTGGAGGTAGAATTGTGATCTCAGAATTTGGCACGCTGGCCCTTCCTGACCCATGCAAGAGCATCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 72 bp | AGAACCTCTTGGCCCATAGCTGTTCCCCATGTTGTATaGTGTCCCATCTGGGTCGTAATGAGGATGTGCAGT | + |
Preference number: 6 (lower is better) Translates to: RTSWPIAVPHVV*CPIWVVMRMCS Trigger: ACTGCACATCCTCATTACGACCCAGATGGGACAGCATACAACATGGGGAACAGCTATGGGCCAAGAGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 72 bp | GGCTCAAACCTTGACATGAAACGTTCAAAGATGCTCTaGCATGGGTCAGGAAGGGCCAGCGTGCCAAATTCT | + |
Preference number: 6 (lower is better) Translates to: GSNLDMKRSKML*HGSGRASVPNS Trigger: AGAATTTGGCACGCTGGCCCTTCCTGACCCATGCAAGAGCATCTTTGAACGTTTCATGTCAAGGTTTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 72 bp | GCATCCAAGACAAGGAGGAAGTTGCTTTCACTCTGGTaGGGAGTGATCACCACAGAGAGTATAACCCCACTG | + |
Preference number: 6 (lower is better) Translates to: ASKTRRKLLSLW*GVITTESITPL Trigger: CAGTGGGGTTATACTCTCTGTGGTGATCACTCCCAACCAGAGTGAAAGCAACTTCCTCCTTGTCTTGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 72 bp | GTTGTATGCTGTCCCATCTGGGTCGTAATGAGGATGTaGAGTGGCTCCATTCACAGCAATGAATTTGCTCCA | + |
Preference number: 6 (lower is better) Translates to: VVCCPIWVVMRM*SGSIHSNEFAP Trigger: TGGAGCAAATTCATTGCTGTGAATGGAGCCACTGCACATCCTCATTACGACCCAGATGGGACAGCATACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 72 bp | GCACTGTTGGCCTTATATGTGTCACTCTGTAGAAACTaGCTCTTGTATGTCACTGTGCCCCTCTCCATTCGG | + |
Preference number: 6 (lower is better) Translates to: ALLALYVSLCRN*LLYVTVPLSIR Trigger: CCGAATGGAGAGGGGCACAGTGACATACAAGAGCAAGTTTCTACAGAGTGACACATATAAGGCCAACAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 90 bp | ATAGTAGGTGGCTCAAACCTTGACATGAAACGTTCAAAGATGCTCTaGCATGGGTCAGGAAGGGCCAGCGTGCCAAATTCTGAGATCACA | + |
Preference number: 6 (lower is better) Translates to: IVGGSNLDMKRSKML*HGSGRASVPNSEIT Trigger: TGTGATCTCAGAATTTGGCACGCTGGCCCTTCCTGACCCATGCAAGAGCATCTTTGAACGTTTCATGTCAAGGTTTGAGCCACCTACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS GCA 72 bp | CACTGTTGGCCTTATATGTGTCACTCTGTAGAAACTTaGTCTTGTATGTCACTGTGCCCCTCTCCATTCGGA | + |
Preference number: 6 (lower is better) Translates to: HCWPYMCHSVET*SCMSLCPSPFG Trigger: TCCGAATGGAGAGGGGCACAGTGACATACAAGAGCAAGTTTCTACAGAGTGACACATATAAGGCCAACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 90 bp | GCCAGCGTGCCAAATTCTGAGATCACAATTCTACCTCCAGCACTGTaGGCCTTATATGTGTCACTCTGTAGAAACTTGCTCTTGTATGTC | + |
Preference number: 6 (lower is better) Translates to: ASVPNSEITILPPAL*ALYVSLCRNLLLYV Trigger: GACATACAAGAGCAAGTTTCTACAGAGTGACACATATAAGGCCAACAGTGCTGGAGGTAGAATTGTGATCTCAGAATTTGGCACGCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS TCA 72 bp | GTTGGTGTTGTCAGTCATAGTAGGTGGCTCAAACCTTaGCATGAAACGTTCAAAGATGCTCTTGCATGGGTC | + |
Preference number: 6 (lower is better) Translates to: VGVVSHSRWLKP*HETFKDALAWV Trigger: GACCCATGCAAGAGCATCTTTGAACGTTTCATGTCAAGGTTTGAGCCACCTACTATGACTGACAACACCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 72 bp | CATCTAAGGGCAAGACAAATCTTCGAGGGAAAGACTTaGCCTTTAACTCATAGACCTGATCAAGCCCCTCTC | + |
Preference number: 6 (lower is better) Translates to: HLRARQIFEGKT*PLTHRPDQAPL Trigger: GAGAGGGGCTTGATCAGGTCTATGAGTTAAAGGCAAAGTCTTTCCCTCGAAGATTTGTCTTGCCCTTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 90 bp | GCACAGATCAATCACAATACAGCCCTGGTCCTCAAAGGCATTGATTaGATGATAGGTAAGAAAAGGCATGCTGTAGTACATTCCTGGGAG | + |
Preference number: 6 (lower is better) Translates to: AQINHNTALVLKGID*MIGKKRHAVVHSWE Trigger: CTCCCAGGAATGTACTACAGCATGCCTTTTCTTACCTATCATCAAATCAATGCCTTTGAGGACCAGGGCTGTATTGTGATTGATCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 72 bp | CCAAATTCTGAGATCACAATTCTACCTCCAGCACTGTaGGCCTTATATGTGTCACTCTGTAGAAACTTGCTC | + |
Preference number: 6 (lower is better) Translates to: PNSEITILPPAL*ALYVSLCRNLL Trigger: GAGCAAGTTTCTACAGAGTGACACATATAAGGCCAACAGTGCTGGAGGTAGAATTGTGATCTCAGAATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CCA 72 bp | CAAATTCTGAGATCACAATTCTACCTCCAGCACTGTTaGCCTTATATGTGTCACTCTGTAGAAACTTGCTCT | + |
Preference number: 6 (lower is better) Translates to: QILRSQFYLQHC*PYMCHSVETCS Trigger: AGAGCAAGTTTCTACAGAGTGACACATATAAGGCCAACAGTGCTGGAGGTAGAATTGTGATCTCAGAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |
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CDS CAA 90 bp | ACAGCTTCATCTTTACAGGCTGTTCGACAAAGATTATGTAGTTTTTaGTCATTCCAAAGCTATGGTAGTAAGAAGGCTTCATTTTCTCAG | + |
Preference number: 6 (lower is better) Translates to: TASSLQAVRQRLCSF*SFQSYGSKKASFSQ Trigger: CTGAGAAAATGAAGCCTTCTTACTACCATAGCTTTGGAATGACAAAAAACTACATAATCTTTGTCGAACAGCCTGTAAAGATGAAGCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119103.2 |